mRNA_H-elongata_contig71439.14806.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig71439.14806.1 vs. uniprot
Match: D8LI01_ECTSI (Haloacid dehalogenase-like hydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI01_ECTSI) HSP 1 Score: 289 bits (739), Expect = 1.230e-92 Identity = 143/198 (72.22%), Postives = 164/198 (82.83%), Query Frame = 1
Query: 10 RENGIVFVPASGRGKSGMFSAMEELGESLKRDGAPFVCMNGLTVYGQGDGCH--GEIIYSEVMCPRLAARVIGFWRSHPLAKAAGVSLCGSEGDTLVVERLDKRTSGFTSYSEPLPVEVGDLMDAIEAGMKLNRLFFWGETRAAVDAFKVDLAEYLKDHPAELTRGVPEMIEVLPPGASKAVGLGALLKEMGISPDEV 597
R GI+FVPASGR K GM S M ELG+ L+RDG+P VCMNGLTVYGQGDG GEII+SE+MCP LAARV+ FW++HPLA+AAGVSLCGSEG+T+VVE LD RTS F + EPLP EVG +AI GM LNRL+FWG TRAAVDAF+ DL E+L+DHPAELTRGVPEMIEVLP GASKAVGL ALLK +G+SP+EV
Sbjct: 276 RAKGIIFVPASGRSKLGMISVMGELGQELQRDGSPIVCMNGLTVYGQGDGNGDLGEIIHSELMCPELAARVVAFWKAHPLAEAAGVSLCGSEGETIVVETLDPRTSSFPDWGEPLPKEVGSWQEAIAGGMGLNRLYFWGPTRAAVDAFEEDLKEHLQDHPAELTRGVPEMIEVLPHGASKAVGLEALLKTLGVSPEEV 473
BLAST of mRNA_H-elongata_contig71439.14806.1 vs. uniprot
Match: A0A6H5J9Y9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9Y9_9PHAE) HSP 1 Score: 268 bits (686), Expect = 1.620e-84 Identity = 142/204 (69.61%), Postives = 163/204 (79.90%), Query Frame = 1
Query: 10 RENGIVFVPASGRGKSGMFSAMEELGESLKRDGAPFVCMNGLTVYGQGDGCH--GEIIYSEVMCPRLAARVIGFWRSHPLAKAAGVSLCGSEGDTLVVERLDKRTS----GFTSYSE-PLP-VEVGDLMDAIEAGMKLNRLFFWGETRAAVDAFKVDLAEYLKDHPAELTRGVPEMIEVLPPGASKAVGLGALLKEMGISPDEV 597
R GI+FVPASGR KSGM SAM ELG+ L+RDG+PFVCMNGLTVYGQGDG GEII+SE+MC LAARV+ FW++HPLA+AAGVSLCGSEG+T+VVE LD RTS GF + P + G +AI GM LNRL+FWG TRAAVDAF+ DL E+LKDHPAELTRGVPEMIEVLP GASKAVGL ALLK +G+SP+EV
Sbjct: 258 RAKGIIFVPASGRSKSGMISAMGELGQELQRDGSPFVCMNGLTVYGQGDGNGDLGEIIHSELMCLELAARVVAFWKAHPLAEAAGVSLCGSEGETIVVETLDPRTSRKVLGFELFGFWPCDSLREGSWQEAIAGGMGLNRLYFWGPTRAAVDAFEEDLKEHLKDHPAELTRGVPEMIEVLPHGASKAVGLEALLKTLGVSPEEV 461
BLAST of mRNA_H-elongata_contig71439.14806.1 vs. uniprot
Match: D8LI88_ECTSI (Haloacid dehalogenase-like hydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI88_ECTSI) HSP 1 Score: 110 bits (276), Expect = 1.710e-25 Identity = 67/191 (35.08%), Postives = 105/191 (54.97%), Query Frame = 1
Query: 22 IVFVPASGRGKSGMFSAM-EELGESLKRDGAPFVCMNGLTVY-GQGDGCHGEIIYSEVMCPRLAARVIGFWRSHPLAKAAGVSLCGSEGDTLVVERLDKRTSGFTSYSEPLPVEVGDLMDAIEAGMKLNRLFFWGETRAAVDAFKVDLAEYLKDHPAELTRGVPEMIEVLPPGASKAVGLGALLKEMGISP 588
+ F PA+G+ ++GM+ + E++ LK P V + GL VY G GD E++Y ++ + ++V F GVSL GD +V D T YSEP+P VG L DA+ AG+++++L +++ A+D + D+ + D A T+ +P+M+EVLP GASK G+ LLK +GI P
Sbjct: 130 LAFFPATGKTRTGMYKILGEDIAAHLKTKDTPGVFIQGLVVYSGAGD----EVLYERLLDVEIVSQVASFCEER------GVSLIAYSGDEIVCSVKDAETDKIALYSEPMPSAVGPLTDAMAAGLRVHKLILM-DSKEAIDRVRPDIERLIGDR-ATFTQALPDMLEVLPAGASKGHGVDVLLKHLGIDP 308
BLAST of mRNA_H-elongata_contig71439.14806.1 vs. uniprot
Match: A0A836C834_9STRA (HAD-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C834_9STRA) HSP 1 Score: 106 bits (264), Expect = 5.760e-24 Identity = 67/190 (35.26%), Postives = 100/190 (52.63%), Query Frame = 1
Query: 13 ENGIVFVPASGRGKSGMFSAMEELGESLKRDGAPFVCMNGLTVYGQGDGCHGEIIYSEVMCPRLAARVIGFWRSHPLAKAAGVSLCGSEGDTLVVERL-DKRTSGFTSYSEPLPVEVGDLMDAIEAGMKLNRLFFWGETRAAVDAFKVDLAEYLKDHPAELTRGVPEMIEVLPPGASKAVGLGALLKEMG 579
++GIVF PA+G+ ++GM + + G+ LK GAP V + GL VYG G ++IY ++ + V F R +SL GD +V RL DK + Y EP P VG++ +A+ AG+ +++L V + LA+ L A L + +P M+EVLP GASK +G+ LL MG
Sbjct: 98 DSGIVFFPATGKSRAGMMNTLGPAGDILKARGAPGVYIQGLVVYGPGPD--SKVIYERLLGADIGREVAQFCRDR------NMSLIAYSGDRIVCTRLEDKYVTTIADYHEPFPEAVGEIDEAMAAGLPVHKLIIMAPAEEVVQQ-RPALAQLLGQR-ASLVQAMPHMLEVLPLGASKGIGVAKLLAHMG 277
BLAST of mRNA_H-elongata_contig71439.14806.1 vs. uniprot
Match: A0A6H5KW38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW38_9PHAE) HSP 1 Score: 103 bits (258), Expect = 9.330e-24 Identity = 64/187 (34.22%), Postives = 101/187 (54.01%), Query Frame = 1
Query: 34 PASGRGKSGMFSAM-EELGESLKRDGAPFVCMNGLTVY-GQGDGCHGEIIYSEVMCPRLAARVIGFWRSHPLAKAAGVSLCGSEGDTLVVERLDKRTSGFTSYSEPLPVEVGDLMDAIEAGMKLNRLFFWGETRAAVDAFKVDLAEYLKDHPAELTRGVPEMIEVLPPGASKAVGLGALLKEMGISP 588
P + + ++GM+ + E++ LK P V + GL VY G GD E++Y ++ + ++V F GVSL GD +V D T YSEP+P VG L DA+ AG+++++L +++ A+D + D+ + D A T+ +P+M+EVLP GASK G+ LLK +GI P
Sbjct: 16 PRARQTRTGMYKILGEDIAAHLKAKDTPGVFIQGLVVYSGAGD----EVLYERLLDIEIVSQVASFCEER------GVSLIAYSGDEIVCSEKDAETDKIALYSEPMPSAVGPLTDAMAAGLRVHKLILM-DSKEAIDRVRPDIERLIGDR-ATFTQALPDMLEVLPAGASKGHGVNVLLKHLGIDP 190
BLAST of mRNA_H-elongata_contig71439.14806.1 vs. uniprot
Match: R7QCM4_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QCM4_CHOCR) HSP 1 Score: 99.0 bits (245), Expect = 3.670e-21 Identity = 66/201 (32.84%), Postives = 105/201 (52.24%), Query Frame = 1
Query: 4 VLRENGIVFVPASGRGKSGMFSAMEELGESLKR---DGAPFVCMNGLTVYGQGDGCHGEIIYSEVMCPRLAARVIGFWRSHPLAKAAGVSLCGSEGDTLVVERLDKRTSGFTSYSEPLPVEVGDLMDAIEAGMKLNRLFFWGETRAAVDAFKVDLAEYLKDHPAELTRGVPEMIEVLPPGASKAVGLGALLKEMGISPDEV 597
+L E ++FVPA+G+ ++G +M ++G+ L G P V + GL V+G+ +G+++Y LA R + +AK G+SL D ++ ER DK SY EP P+ +GD DAI LN+ + E + +D + +AE + + LT+ M+EVLPP ASK G+ LL + I+P+ V
Sbjct: 107 LLDETDVMFVPATGKSRAGALKSMADVGDYLNDRNPGGCPGVYLQGLIVFGE----NGDVVYENKCADMLAQRTVD------IAKELGLSLIAYSRDDILCERTDKFVDLIPSYKEPSPLAIGDWGDAI-GKRPLNKFIYMAEP-SHIDEIRPIVAERIGNL-GHLTQAQSNMLEVLPPNASKGNGVRRLLNSLQIAPEHV 294
BLAST of mRNA_H-elongata_contig71439.14806.1 vs. uniprot
Match: A0A7S3XQN8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQN8_HETAK) HSP 1 Score: 97.1 bits (240), Expect = 1.290e-20 Identity = 59/194 (30.41%), Postives = 99/194 (51.03%), Query Frame = 1
Query: 10 RENGIVFVPASGRGKSGMFSAMEELGESLKRDGAPFVCMNGLTVYGQGDGCHGEIIYSEVMCPRLAARVIGFWRSHPLAKAAGVSLCGSEGDTLVVERLDKRTSGFTSYSEPLPVEVGDLMDAIEA-GMKLNRLFFWGETRAAVDAFKVDLAEYLKDHPAELTRGVPEMIEVLPPGASKAVGLGALLKEMGISP 588
R+ GI+F PA+G+ + G+++A+ E G+ LK++ P V + GL VY Q +G +I+ ++ +V+ F G+SL D ++ + D T +Y EP P +G L +A+ A G N+L G + + + E L AE+T+ + M+E+LP G SK G+ LL +G+ P
Sbjct: 67 RKKGILFFPATGKSRQGVYNALGEFGQELKKENCPGVFLQGLIVYDQ----NGNVIHEMLLPLEPVKKVVQFCTRE------GISLVAYHRDRILCSQRDANTDKLINYCEPTPEAIGPLDEAMVANGQVYNKLIIMGNDEDQITKIRPAM-EALIGEDAEITQAIGYMLEILPKGGSKGDGVRRLLGALGVDP 249
BLAST of mRNA_H-elongata_contig71439.14806.1 vs. uniprot
Match: A0A0G4H592_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4H592_9ALVE) HSP 1 Score: 95.1 bits (235), Expect = 9.760e-20 Identity = 69/200 (34.50%), Postives = 101/200 (50.50%), Query Frame = 1
Query: 10 RENGIVFVPASGRGKSGMFSAMEELGESLKRDGA-PFVCMNGLTVYGQGDGCHGEIIYSEVMCPRLAARVIGFWRSHPLAKAAGVSLCGSEGDTLVVERLDKRTSGF-TSYSEPLPVEVGDLMDAIEAGMKLNRLFFWG--ETRAAVDAFKVDLAEYLKDHPAELTRGVPEMIEVLPPGASKAVGLGALLKEMGISPDEV 597
R NG ASGR ++G +A+ GE LK G P V NGL VYGQ ++++ + A V F R A G+ G + ++ + L + Y E LP+ VGD+++A + G +N++ + ET AAV LA L + + VP+MIEVLP GASKA G+ ALLK + I P+++
Sbjct: 80 RRNGKFIFIASGRTRTGAMNALGAYGELLKAQGGFPGVYCNGLLVYGQ----RSQVLFERALDTSAVAAVAEFCR------ARGLPFVGYSREEILCDELTAHLARMHNEYKEALPLAVGDVVEAAKEGRVINKMLIFDDPETIAAVRPALESLAPSLG---GRVVQAVPDMIEVLPEGASKAEGIAALLKNVNIDPEDL 266
BLAST of mRNA_H-elongata_contig71439.14806.1 vs. uniprot
Match: A0A1X6NK81_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NK81_PORUM) HSP 1 Score: 94.4 bits (233), Expect = 2.250e-19 Identity = 61/187 (32.62%), Postives = 101/187 (54.01%), Query Frame = 1
Query: 19 GIVFVPASGRGKSGMFSAMEELGESLKR---DGAPFVCMNGLTVYGQGDGCHGEIIYSEVMCPRLAARVIGFWRSHPLAKAAGVSLCGSEGDTLVVERLDKRTSGFTSYSEPLPVEVGDLMDAIEAGMKLNRLFFWGETRAAVDAFKVDLAEYLKDHPAELTRGVPEMIEVLPPGASKAVGLGALLK 570
GI+FVPA+G+ + G +A+ +LG+ L+ +G P V + GL V+G G ++Y + P+LA ++ A+A SL GD ++ E D+ T +Y+EP+P VG ++ + LN+ + G + A + + E + A +T+ +P+M+EVLPPGASK G+ LLK
Sbjct: 108 GILFVPATGKSRYGALAALGDLGDDLRAAYPNGVPGVYLQGLNVFGDD----GSMVYEHTVTPKLARAIVAE------ARAVNSSLIAYSGDRILCETADEFTDLLPTYAEPVPEVVGTWESVLDT-VPLNKFIYLGSADH-ITALRPAVEEAVGAE-ATITQALPDMLEVLPPGASKGDGVRRLLK 281
BLAST of mRNA_H-elongata_contig71439.14806.1 vs. uniprot
Match: A0A2M8NRE9_9CHLR (Uncharacterized protein n=1 Tax=Phototrophicales bacterium TaxID=2364211 RepID=A0A2M8NRE9_9CHLR) HSP 1 Score: 85.9 bits (211), Expect = 1.210e-16 Identity = 62/197 (31.47%), Postives = 101/197 (51.27%), Query Frame = 1
Query: 13 ENGIVFVPASGRGKSGMFSAMEELGESLKRDGAPFVCMNGLTVYGQGDGCHGEIIYSEVMCPRLAARVIGFWRSHPLAKAAGVSLCGSEGDTLVVERLDKRTSG--FTSYSEPLPVEVGDLMDAIEAGMKLNRLFFWGETRAAVDAFKVDLAEYLKDHPAELTRGVPEMIEVLPPGASKAVGLGALLKEMGISPDEV 597
+ GI + A+G+ + + +E G P +C+ GL VY GDG +I++ +V+ P A +VI + A+ G G ++++ ++ FT Y EP+P VG L + +++ + +N++ GE RA V A + L + + GVP+M+EVLPPG SK L ALLKE+ + PD V
Sbjct: 40 DKGITVIFATGKTYTAVAPLVERFGIKT-----PCICVQGLVVY-NGDG---KIMHQQVLSPAAARQVITY------AEDRGFFALLYSGSRILMKARNEEVEKTLFTRYHEPVPETVGALQNVLDS-VPINKIALVGEPRA-VKALRWQLNAQIGSAVRLMQAGVPQMVEVLPPGTSKGTALKALLKELKVDPDHV 219 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig71439.14806.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig71439.14806.1 >prot_H-elongata_contig71439.14806.1 ID=prot_H-elongata_contig71439.14806.1|Name=mRNA_H-elongata_contig71439.14806.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=199bp MVLRENGIVFVPASGRGKSGMFSAMEELGESLKRDGAPFVCMNGLTVYGQback to top mRNA from alignment at H-elongata_contig71439:580..3158- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig71439.14806.1 ID=mRNA_H-elongata_contig71439.14806.1|Name=mRNA_H-elongata_contig71439.14806.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2579bp|location=Sequence derived from alignment at H-elongata_contig71439:580..3158- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig71439:580..3158- >mRNA_H-elongata_contig71439.14806.1 ID=mRNA_H-elongata_contig71439.14806.1|Name=mRNA_H-elongata_contig71439.14806.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1194bp|location=Sequence derived from alignment at H-elongata_contig71439:580..3158- (Himanthalia elongata Himel1 dioecious)back to top |