mRNA_H-elongata_contig71435.14805.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig71435.14805.1 vs. uniprot
Match: D7FS56_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS56_ECTSI) HSP 1 Score: 334 bits (857), Expect = 3.500e-102 Identity = 192/323 (59.44%), Postives = 216/323 (66.87%), Query Frame = 1
Query: 1 ETPLHSIARCKGHLHAAVVAFDSLLALEASSSSIQGLGDDXXXXXXXXASGNTAEHHRPPRKVNLEHGPKKGYGAGKGGEDVESSEN------SAAMAERSTVGLGGALGGFAFEPEMNRHLLGSSPHHHVHLRVNRGEGPRMLRCLAREAEYACGVIECEDLSETRRYLLWFSQTQAEDGDSAKGCRAVGTASLFARSLAAVCLYRQDMVLGRFHPILFVAEAMVDVGVPNAVVQSPAGQAYLQRVGKPVHETLRLLCLNRARQRTSLEVQLQDWRTLQAYADTVDDAFQLQYGLGKGAQRYMANWALCEVLGLMHRYLQVG 951
ETPL+ I RC HL AA +A +SLLA+EA + + A +RPP G AG G + ++ N + M V LGG GGFAFE EMNRHLLGSSP HHVH R R EGPR L LAREAE ACGVI C+DL + RR LL Q AE KG A+GTASLFARS+AAVCLYRQDMVLGRF + FVAEAM DVGVP+AVV SP+G A+L RVGKPV+ETLR LCLNR RQR SLE+Q+QDWRTLQAYA TVDDAFQLQYGLG G QRYM+ WAL EVLGLMHRYLQ+G
Sbjct: 561 ETPLNGIVRCGDHLRAAALALESLLAIEA-----------FVPGGTSAETTHEAARNRPPVGG--------GVTAGAGAVTLSAAANRQGNGGNRKMPPLPPVRLGGDAGGFAFEAEMNRHLLGSSPQHHVHFRRGRAEGPRALLLLAREAERACGVIRCDDLLDVRRSLLRLYQPPAES----KGGPAIGTASLFARSVAAVCLYRQDMVLGRFDVMWFVAEAMTDVGVPDAVVNSPSGMAFLDRVGKPVYETLRTLCLNRGRQRMSLELQMQDWRTLQAYASTVDDAFQLQYGLGAGTQRYMSKWALTEVLGLMHRYLQIG 860
BLAST of mRNA_H-elongata_contig71435.14805.1 vs. uniprot
Match: A0A836CGZ5_9STRA (Mak10 subunit, NatC N-terminal acetyltransferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGZ5_9STRA) HSP 1 Score: 140 bits (354), Expect = 1.380e-33 Identity = 87/215 (40.47%), Postives = 117/215 (54.42%), Query Frame = 1
Query: 307 LGGFAFEPEMNRHLLGSSPHHHVHLRVNRGEGPRMLRCLAREAEYACGVIECEDLSETRRYLLWFSQTQAEDGDSAKGCRAVGTASLFARSLAAVCLYRQDMVLGRFHPILFVAEAMVDVGVPNAVVQSPAGQAYLQRVGKPVHETLRLLCLNRARQRTSLEVQLQDWRTLQAYADTVDDAFQLQYGLGKGAQRYMANWALCEVLGLMHRYLQVG 951
+G F + NR LLGS+P V L GE +A+ ACGV+ C L++ RR+LL + KG T + RS+AAVCLYR +++LGRF FV +AMV GVP ++ QS G ++ KP++E LR LCLNR+R R LE+ + DW +Q A DDA +L Y L Y++NWA E LGLM Y+Q G
Sbjct: 363 MGPPVFNRDFNRSLLGSTPSRRV-LFPLLGEAYERAALMAQHCCGACGVMACGSLNDVRRHLLELAAPPLTVALKEKGAYMGPT--ILPRSIAAVCLYRGELLLGRFDVNDFVVDAMVAAGVPASLAQSQPGLPVVESAVKPIYEDLRGLCLNRSRLRLKLELAMVDWCGIQDAAARADDALRLSYQLPDTTPHYLSNWATREALGLMQLYVQAG 574
BLAST of mRNA_H-elongata_contig71435.14805.1 vs. uniprot
Match: A0A6U2L823_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A6U2L823_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 4.110e-16 Identity = 51/145 (35.17%), Postives = 80/145 (55.17%), Query Frame = 1
Query: 553 GTASLFARSLAAVCLYRQDMVLGRFHPILFVAEAMVDVGVPNAVVQSPAGQAYLQRVGKPVHETLRLLCLNRARQRTSLE-VQLQDWRTLQAYADTVD-----DAFQLQYGLGKGAQRYMA------NWALCEVLGLMHRYLQVG 951
G ++ RSL LY D++LG++ FV +AM D GVP+++ +P G +++ RV KP +++LRLLCLNR RQ+ ++ + L+DW LQ A +D +A + Q R M+ NW + E L LM + +G
Sbjct: 55 GPPNILTRSLLVANLYFNDLILGQWSATDFVHDAMHDAGVPSSLTSTPYGMSFVDRVVKPAYDSLRLLCLNRGRQKECIDAIILKDWGLLQQEAKAIDYHYNEEALEQQQTSNSSVSRKMSARFHATNWIIAETLSLMEGSISLG 199
BLAST of mRNA_H-elongata_contig71435.14805.1 vs. uniprot
Match: A0A1V9YX48_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YX48_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 1.220e-15 Identity = 47/131 (35.88%), Postives = 77/131 (58.78%), Query Frame = 1
Query: 562 SLFARSLAAVCLYRQDMVLGRFHPILFVAEAMVDVGVPNAVVQSPAGQAYLQRVGKPVHETLRLLCLNRARQRTSLEVQLQDWRTLQAYADTVDDAFQLQYGLGKGAQ-RYMANWALCEVLGLMHRYLQVG 951
++ RS + LY + G+++ + ++ ++MV GVP+ ++ + G Y R + V+E+L+L NR RQR+ LE+ LQDW L+ A +DD F + G+ K + RY WAL + LGLM +YL +G
Sbjct: 372 NILVRSYILLFLYIDKKMYGQYNFMEWLGDSMVMAGVPSVLLSTQEGMMYSSRCIEAVYESLKLHMHNRPRQRSRLELMLQDWAVLETEAAAIDDKFVTEMGIPKASYPRYFTAWALEQTLGLMQQYLSLG 502
BLAST of mRNA_H-elongata_contig71435.14805.1 vs. uniprot
Match: A0A067C698_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C698_SAPPC) HSP 1 Score: 87.8 bits (216), Expect = 1.630e-15 Identity = 48/133 (36.09%), Postives = 78/133 (58.65%), Query Frame = 1
Query: 556 TASLFARSLAAVCLYRQDMVLGRFHPILFVAEAMVDVGVPNAVVQSPAGQAYLQRVGKPVHETLRLLCLNRARQRTSLEVQLQDWRTLQAYADTVDDAFQLQYGLGKGAQ-RYMANWALCEVLGLMHRYLQVG 951
T ++ RS + LY + G+++ + ++ ++MV GVP+ ++ + G Y R + V+E+L+L NR RQR+ LE+ LQDW L++ A +DD F + G+ K RY WAL + LGLM +YL +G
Sbjct: 366 TPNILVRSYILLFLYIDKKMYGQYNFMEWLGDSMVMAGVPSVLLSTQEGMTYSSRCIEAVYESLKLHMHNRPRQRSRLELMLQDWVILESEAVAIDDKFVTEMGIPKATYPRYFTAWALEQTLGLMQQYLYLG 498
BLAST of mRNA_H-elongata_contig71435.14805.1 vs. uniprot
Match: A0A1V9ZQB6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZQB6_9STRA) HSP 1 Score: 84.3 bits (207), Expect = 2.240e-14 Identity = 45/131 (34.35%), Postives = 77/131 (58.78%), Query Frame = 1
Query: 562 SLFARSLAAVCLYRQDMVLGRFHPILFVAEAMVDVGVPNAVVQSPAGQAYLQRVGKPVHETLRLLCLNRARQRTSLEVQLQDWRTLQAYADTVDDAFQLQYGLGKGAQ-RYMANWALCEVLGLMHRYLQVG 951
++ RS + LY + G+++ + ++ ++MV GVP+ ++ + G + R + ++E+L+L NR RQR+ LE+ LQDW L+ A ++DD F + G+ K RY WAL + LGLM +YL +G
Sbjct: 285 NILVRSYILLFLYIDKKMYGQYNFMEWLGDSMVMAGVPSVLLSTQEGMQFSSRCIEAIYESLKLHMHNRPRQRSRLELMLQDWVILEVEAASIDDRFVTEMGIPKANYPRYFTAWALEQTLGLMQQYLMLG 415
BLAST of mRNA_H-elongata_contig71435.14805.1 vs. uniprot
Match: A0A6U9WSR9_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A6U9WSR9_9STRA) HSP 1 Score: 84.3 bits (207), Expect = 2.320e-14 Identity = 61/214 (28.50%), Postives = 104/214 (48.60%), Query Frame = 1
Query: 319 AFEPEMNRHLLGSSPHHHVHLRVNRGEGPRMLRCLAREAEYACGVI-ECEDLSETRRYLLWFSQTQAEDGDSAKGCRAVGTASLFARSLAAVCLYRQDMVLGRFH-PILFVAEAMVDVGVPNAVVQSPAG-QAYLQRVGKPVHETLRLLCLNRARQRTSLEVQLQDWRTLQAYADTVDDAFQLQYGLGKGAQRYMANWALCEVLGLMHRYLQVG 951
AF+ +N L+G++P + R + + + E C ++ + L R + S T A ++ RSLA + LY + + G++ P + V+ GVP++V S AG A+L R+ KPV++TL++L LN+ RQRT ++V L DW L+ A VD Q +G+ + Y + + LC + LM ++ +G
Sbjct: 249 AFDSNVNCPLVGNAPLRKIVFRETEESISVLKKIIGELDEIVCTILLKANTLGRIRCMMRKLSATSA---------------NILTRSLAVLSLYFDEKIFGQYLLPDMIVSHLKQLSGVPDSVFTSTAGVPAFLNRLCKPVYDTLKVLALNQNRQRTYIDVMLGDWAALREEAYIVDVTHHQQGRVGQDLKPYFSLYVLCVTIDLMDNFVDLG 447
BLAST of mRNA_H-elongata_contig71435.14805.1 vs. uniprot
Match: A0A7S1ZRS6_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZRS6_TRICV) HSP 1 Score: 83.2 bits (204), Expect = 4.830e-14 Identity = 61/218 (27.98%), Postives = 107/218 (49.08%), Query Frame = 1
Query: 322 FEPEMNRHLLGSSPHHHVHLRVNRGEGPRMLRCLAREAEYACGVIECED-LSETRRYLLWFSQTQAEDGDSAKGCRAVGTASLFARSLAAVCLYRQDMVLGRFHPILFVAEAMVDVGV-PNAVVQSPAGQAYLQRVGKPVHETLRLLCLNRARQRTSLE-VQLQDWRTLQAYADTVDDAFQLQY-----GLGKGAQRYMANWALCEVLGLMHRYLQVG 951
F+ +NR LLG+SP V + + G + + ++ AC ++ C L RR L+ SQ+ ++ RSL + LY D++LG+ + +A MV + P+++ S G+++L R+GKP+++TL++L LNR RQR + + +++W TL+ A VD Q + G+ A Y N+ L + +M + G
Sbjct: 69 FDAYINRRLLGNSPVRKVRFQCHAGALSSLSKIMSELDWAACDLLLCGGTLGRIRRVLVHISQSSV---------------NVLGRSLIVLNLYFDDLLLGQHGLPVLIARDMVQLSACPSSLTNSDYGRSFLNRLGKPIYDTLKILALNRNRQRAYADALMIKEWATLKTEAAAVDYYHQKELCTKLGGVPGTAMPYATNYVLQTTVWIMEHHHGAG 271
BLAST of mRNA_H-elongata_contig71435.14805.1 vs. uniprot
Match: A0A7S1ZHY9_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZHY9_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 2.010e-13 Identity = 68/236 (28.81%), Postives = 115/236 (48.73%), Query Frame = 1
Query: 322 FEPEMNRHLLGSSPHHHVHLRVNRGEGPRMLRCLAREAEYA-CGVI--ECEDLSETRRYLLWFSQTQAE-----DGDSAKGCRAVGTASLFARSLAAVCLYRQDMVLGRFHPILFVAEAMV-DVGVPNAVVQSPAGQAYLQRVGKPVHETLRLLCLNRARQRTSLE-VQLQDWRTLQAYADTVDDAFQLQYGLGKGAQR----------------YMANWALCEVLGLMHRYLQVG 951
F+ +NR LLG++P V ++ + LR E +YA C ++ E LS +R L S DG S+ + T ++ RSL + LY D++LG++ +A M GVP+ +V + G+++L R+GKP+++TL++L LNR RQR ++ + +++W LQ A VD ++ + K Q Y+ N+ L + LM +L +G
Sbjct: 340 FDSNVNRRLLGNAPVRKVQF-LSPLNTIQSLRNTLHEIDYAVCDLLLLEHHTLSRIQRQLSSISSPVNSSVVKGDGSSSSSNNTINTINILGRSLIVLNLYFDDLLLGQYVLSDIIASHMKHSAGVPHELVDAEYGKSFLHRLGKPLYDTLKVLTLNRNRQRAYMDALMMREWSALQREATAVDYYYREDVEVQKQQQLIASSPITTAKPTTTTPYVTNYVLGIGVWLMEHHLGIG 574
BLAST of mRNA_H-elongata_contig71435.14805.1 vs. uniprot
Match: A0A7S2RN56_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RN56_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 5.900e-13 Identity = 46/130 (35.38%), Postives = 71/130 (54.62%), Query Frame = 1
Query: 562 SLFARSLAAVCLYRQDMVLGRFHPILFVAEAMVDVGVPNAVVQSPAGQAYLQRVGKPVHETLRLLCLNRARQRTSLEVQLQDWRTLQAYADTVDDAFQLQYGLGKGAQRYMANWALCEVLGLMHRYLQVG 951
S+ RS+ A+ LY D+VL + + + + + GVP S G A LQR+ KPV++ LRLL LN+ RQR ++ L +W T+Q A VD GL A +Y + W+ ++L LM ++ +G
Sbjct: 16 SVIHRSVIAMNLYVDDLVLAKLPFTQALIQLLDEDGVPQVATTSEYGIALLQRLAKPVYDLLRLLTLNKNRQRQRIDDLLPEWDTIQQEAQLVDQNVCETAGLALDAFQYCSRWSFAQMLRLMQEHVSLG 145 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig71435.14805.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig71435.14805.1 >prot_H-elongata_contig71435.14805.1 ID=prot_H-elongata_contig71435.14805.1|Name=mRNA_H-elongata_contig71435.14805.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=317bp ETPLHSIARCKGHLHAAVVAFDSLLALEASSSSIQGLGDDDSTPPPSPASback to top mRNA from alignment at H-elongata_contig71435:829..2939+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig71435.14805.1 ID=mRNA_H-elongata_contig71435.14805.1|Name=mRNA_H-elongata_contig71435.14805.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2111bp|location=Sequence derived from alignment at H-elongata_contig71435:829..2939+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig71435:829..2939+ >mRNA_H-elongata_contig71435.14805.1 ID=mRNA_H-elongata_contig71435.14805.1|Name=mRNA_H-elongata_contig71435.14805.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1902bp|location=Sequence derived from alignment at H-elongata_contig71435:829..2939+ (Himanthalia elongata Himel1 dioecious)back to top |