mRNA_H-elongata_contig71284.14792.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig71284.14792.1 vs. uniprot
Match: D8LTZ3_ECTSI (Beta-1,4-galactosyltransferase, family GT7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTZ3_ECTSI) HSP 1 Score: 225 bits (573), Expect = 1.820e-69 Identity = 116/222 (52.25%), Postives = 142/222 (63.96%), Query Frame = 1
Query: 13 HNGRQLPPGWVKGESLRHKKSYFFNTQTGESSWLPPESTPAVAGKTGITGEIETYGASHVVHELEETVFPAVKRSRQENPLLPPSSKEVGHDHGDGVREEIETAEVAVIVPYRDLDPAQKRAAHLASFVPYMEEYLAKHVRCQGGEFRLFIVEQSTDDGLKFNRGKLLNIGFDLALAEGFNAFVFHDVDLLPSDELGKWYASRPERPAHIARVWKQYSNNPK 678
H+GR+LPPGWV+ S + + YFF+TQTGES+W P + E + S P+ LPP DG + +VAV+VPYRDLDPAQ+R+AHL FVPYME++L + V GGEFR+++VEQSTDDGLKFNRGKLLNIGFDLA EG F+ HDVDLLPS+EL +WYA+ PERP H+ARVWKQYSNNPK
Sbjct: 4 HDGRKLPPGWVRCVSSKFGRDYFFDTQTGESTWFAPTAPXXXXXSRXXXEEEDLESFSXXXXXXXXXXGPS---------SLPPQ---------DGGK-----TKVAVVVPYRDLDPAQRRSAHLEQFVPYMEDFLERAVGGAGGEFRVYVVEQSTDDGLKFNRGKLLNIGFDLARKEGAQVFLLHDVDLLPSNELARWYATVPERPVHVARVWKQYSNNPK 202
BLAST of mRNA_H-elongata_contig71284.14792.1 vs. uniprot
Match: A0A836CFW6_9STRA (Galactosyl transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFW6_9STRA) HSP 1 Score: 173 bits (438), Expect = 5.850e-49 Identity = 98/218 (44.95%), Postives = 126/218 (57.80%), Query Frame = 1
Query: 25 QLPPGWVKGESLRHK-KSYFFNTQTGESSWLPPESTPAVAGKTGITGEIETYGASHVVHELEETVFPAVKRSRQENPLLPPSSKEVGHDHGDGVREEIETAEVAVIVPYRDLDPAQKRAAHLASFVPYMEEYLAKHVRCQGGEFRLFIVEQSTDDGLKFNRGKLLNIGFDLALAEGFNAFVFHDVDLLPSDELGKWYASRPERPAHIARVWKQYSNNP 675
+LP GWV S + ++Y+FNT TGE++W+ P + +G A+H E PA+KR E G G + E VA+IVP+RD Q+RA HLA FVP M +++ QG EF +FIVEQS +DG KFNRGKLLNIG+D+A +G+N V HDVDLLPS ELG WYA+ P +P HIAR W +YSNNP
Sbjct: 7 ELPEGWVSAPSRTYGGETYYFNTFTGEATWVYPSGAASSSGGAP---------ANHKRALSEAADGPALKRQHTE-----------AAGQGSGAAQGEEPPRVAIIVPFRDQHAEQRRAEHLARFVPAMTQFML----AQGVEFHIFIVEQS-EDGRKFNRGKLLNIGYDIAKNDGYNTLVLHDVDLLPSAELGPWYAAYPHQPVHIARRWPRYSNNP 199
BLAST of mRNA_H-elongata_contig71284.14792.1 vs. uniprot
Match: A0A1Z5KC44_FISSO (Beta-1,4-galactosyltransferase 4 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KC44_FISSO) HSP 1 Score: 172 bits (435), Expect = 1.220e-48 Identity = 94/226 (41.59%), Postives = 130/226 (57.52%), Query Frame = 1
Query: 13 HNGRQLPPGWVKGESLRHKKSYFFNTQTGESSWLPPESTPAVAGKTGITGEIETYGASHVVHELEETVFPAVKRSRQENPLLPPSSKEVGHDHGDGVREEIETAEVAVIVPYRDLDPAQKRAAHLASFVPYMEEYLAKHVRC-QGGEFRLFIVEQSTDDGLKFNRGKLLNIGFDLA---LAEGFNAFVFHDVDLLPSDELGKWYASRPERPAHIARVWKQYSNNPK 678
H LPPGW +G S K++++F+++T + W P ++ A + LE + R+ PP +K D + E++E + VA+IVP+RDL AQKRAAHL F+P+M ++L + + + ++I+EQS DD KFNRGKLLNIGFD+A A + F+FHDVDLLP LG WYA P+RP HIARVWK+YSNNPK
Sbjct: 7 HINDPLPPGWSRGFSNSQKRTFYFHSETKHTQWHFPTASEA----------------KDPMKALERANAAKEREKRKAATTAPPEAKRP-RSESDNILEDLEASSVAIIVPFRDLHAAQKRAAHLQQFIPHMVQFLGSLTKDGKISNYHIYIIEQS-DDQRKFNRGKLLNIGFDVARKAAARNHDVFIFHDVDLLPDAALGDWYAKFPKRPIHIARVWKRYSNNPK 214
BLAST of mRNA_H-elongata_contig71284.14792.1 vs. uniprot
Match: A0A7S4M9S3_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4M9S3_9STRA) HSP 1 Score: 168 bits (425), Expect = 3.560e-48 Identity = 103/226 (45.58%), Postives = 122/226 (53.98%), Query Frame = 1
Query: 16 NGRQLPPGWVKGESLRHKKSYFFNTQTGESSWLPPESTPAVAGKTGITGEIETYGASHVVHELEETVFPAVKRSRQENPLLPPSSKEVGHDHGDGVREEIETAEVAVIVPYRDLDPAQKRAAHLASFVPYMEEYLAKHVRCQG--GEFRLFIVEQSTDDGLKFNRGKLLNIGFDLALAE---GFNAFVFHDVDLLPSDELGKWYASRPERPAHIARVWKQYSNNPK 678
N R LP GW G S +K YF T + W P K GA H V E KRS P + D A VA+IVPYRDL AQ RA HL FVP+M ++L K R +G ++ ++IVEQS DDG KFNRGKLLNIGFDLA + G N F+FHDVDLLP D+LG+WYA P++P HIARVW +YSNNPK
Sbjct: 5 NDRPLPSGWSSGFSKSKQKPYFICGATNHTQWHFPTDDDVADPK----------GAKHRVEETMRAEL--AKRSASSGGGGPSQKRPKSSD----------AASVAIIVPYRDLHAAQNRARHLRQFVPHMLQFLKKLKR-RGLVSDYHVYIVEQS-DDGRKFNRGKLLNIGFDLARRDRRLGHNVFIFHDVDLLPGDDLGEWYAKFPQKPLHIARVWGRYSNNPK 206
BLAST of mRNA_H-elongata_contig71284.14792.1 vs. uniprot
Match: A0A7S4HUL3_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HUL3_9STRA) HSP 1 Score: 168 bits (425), Expect = 3.590e-47 Identity = 103/226 (45.58%), Postives = 122/226 (53.98%), Query Frame = 1
Query: 16 NGRQLPPGWVKGESLRHKKSYFFNTQTGESSWLPPESTPAVAGKTGITGEIETYGASHVVHELEETVFPAVKRSRQENPLLPPSSKEVGHDHGDGVREEIETAEVAVIVPYRDLDPAQKRAAHLASFVPYMEEYLAKHVRCQG--GEFRLFIVEQSTDDGLKFNRGKLLNIGFDLALAE---GFNAFVFHDVDLLPSDELGKWYASRPERPAHIARVWKQYSNNPK 678
N R LP GW G S +K YF T + W P K GA H V E KRS P + D A VA+IVPYRDL AQ RA HL FVP+M ++L K R +G ++ ++IVEQS DDG KFNRGKLLNIGFDLA + G N F+FHDVDLLP D+LG+WYA P++P HIARVW +YSNNPK
Sbjct: 5 NDRPLPSGWSSGFSKSKQKPYFICGATNHTQWHFPTDDDVADPK----------GAKHRVEETMRAEL--AKRSASSGGGGPSQKRPKSSD----------AASVAIIVPYRDLHAAQNRARHLRQFVPHMLQFLKKLKR-RGLVSDYHVYIVEQS-DDGRKFNRGKLLNIGFDLARRDRRLGHNVFIFHDVDLLPGDDLGEWYAKFPQKPLHIARVWGRYSNNPK 206
BLAST of mRNA_H-elongata_contig71284.14792.1 vs. uniprot
Match: B7G071_PHATC (Galactosyl transferase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G071_PHATC) HSP 1 Score: 164 bits (414), Expect = 2.010e-45 Identity = 92/222 (41.44%), Postives = 132/222 (59.46%), Query Frame = 1
Query: 28 LPPGWVKGESLRHKKSYFFNTQTGESSWLPPESTPAVAGKTGITGEIETYGASHVVHELEETVFPAVKRSRQENPLLPPSS--KEVGHDHGDGVREEIETAEVAVIVPYRDLDPAQKRAAHLASFVPYMEEYLAKHVRC-QGGEFRLFIVEQSTDDGLKFNRGKLLNIGFDLALAE--GFNAFVFHDVDLLPSDELGKWYASRPERPAHIARVWKQYSNNPK 678
LPPGW +G S K++++F+ +T + W P ++ A K + G+ + + + E+ + P P ++ D + E ++ VAVIVPYRD+ AQ+RAAHLA FVP+M+ + + ++ + ++ +I+EQS DDG KFNRGKLLNIGFDLA + F+FHDVDLLP D+LG WYA P+ P HIARVW +YSNNPK
Sbjct: 10 LPPGWSRGYSTSQKRTFYFHQETKHTQWHFPTASEA---KDPLKGKQR----AELNKDREKKRQHEDSSGADKRPRGSPGEYMRKTVDTSVDDILELADSTSVAVIVPYRDIHSAQQRAAHLAKFVPHMQRFFNRLLKSGKVSDYHFYIIEQS-DDGRKFNRGKLLNIGFDLARKSKRSHDVFIFHDVDLLPQDDLGSWYAKFPKSPIHIARVWGRYSNNPK 223
BLAST of mRNA_H-elongata_contig71284.14792.1 vs. uniprot
Match: A0A7S3LF72_9STRA (Hypothetical protein (Fragment) n=2 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LF72_9STRA) HSP 1 Score: 161 bits (407), Expect = 2.920e-45 Identity = 100/227 (44.05%), Postives = 125/227 (55.07%), Query Frame = 1
Query: 28 LPPGWVKGESLRHKKSYFFNTQTGESSWLPPEST----PAVAGKTGITGEIETYGASHVVHELEETVF--PAVKRSRQENPLLPPSSKEVGHDHGDGVREEIETAEVAVIVPYRDLDPAQKRAAHLASFVPYMEEYLAKHVRCQG--GEFRLFIVEQSTDDGLKFNRGKLLNIGFDLALAEG--FNAFVFHDVDLLPSDELGKWYASRPERPAHIARVWKQYSNNPK 678
LPPGW + S K+ ++F+ +T + W P ++ P VA K + PAVKR+R S + D E + VAVIVPYRDL AQKRAAHL FVP+M ++ K R +G + ++I+ QS DDG KFNRGKLLNIGFDLA G + F+FHDVDLLPS ELG WYA P +P HIARVW +YSNN K
Sbjct: 10 LPPGWSREYSNSQKRHFYFHKETNHTQWHFPTASEAKDPKVAEKRAREAKERXXXXXXXXXXXAGAASQQPAVKRAR---------SATNTKSNDDDFLELADATSVAVIVPYRDLHVAQKRAAHLKQFVPWMHQFFDKLQR-KGLVSGYHVYIINQS-DDGRKFNRGKLLNIGFDLATKSGRKHDVFIFHDVDLLPSPELGIWYAKMPTKPIHIARVWDRYSNNKK 225
BLAST of mRNA_H-elongata_contig71284.14792.1 vs. uniprot
Match: A0A7S4TAJ5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4TAJ5_9STRA) HSP 1 Score: 150 bits (378), Expect = 3.100e-40 Identity = 90/241 (37.34%), Postives = 121/241 (50.21%), Query Frame = 1
Query: 16 NGRQLPPGWVKGESLRHKKSYFFNTQTGESSWLPPESTPAV------AGKTGITGEIETYGASHVVHELEETVFPAVKRSRQE--------NPLLPPSSKEVGHDHGDGVREEIETAEVAVIVPYRDLDPAQKRAAHLASFVPYMEEYLAKHVRCQG-GEFRLFIVEQSTDDGLKFNRGKLLNIGFDLA-----LAEGFNAFVFHDVDLLPSDELGKWYASRPERPAHIARVWKQYSNNPK 678
N LPPGW KG S +K Y+F+ T + W P ++ A A+ + + + KR+R E +P LP + +A+IVPYRD+ AQ RAAHL F+P+M +L K + ++ ++IVEQS D+ KFNRGKLLNIGFD+A + + N F+FHDVDLLP D LG WY+ P P HIAR W +YSNN K
Sbjct: 4 NDPPLPPGWSKGFSRSQQKPYYFHAATKHNQWHFPTASEAADPLGAKKXXXXXXXXXXXXXATGKRSSADAQLTDSQKRARVETKPATAKPSPSLPDKNS------------------IAIIVPYRDIHQAQNRAAHLRQFLPHMHTFLTKQLASNSIADYHIYIVEQSNDNR-KFNRGKLLNIGFDMASKNPNVKQPHNVFIFHDVDLLPHDNLGSWYSRYPTSPVHIARCWNRYSNNKK 225
BLAST of mRNA_H-elongata_contig71284.14792.1 vs. uniprot
Match: A0A7S0GA09_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GA09_9STRA) HSP 1 Score: 146 bits (369), Expect = 2.010e-38 Identity = 94/248 (37.90%), Postives = 129/248 (52.02%), Query Frame = 1
Query: 28 LPPGWVKGESLRHKKSYFFNTQTGESSWLPP-----------ESTPAVAGKTGITGEIETYGASHVV--------HELEETVFP------AVKRSRQENPLLPPSSKEVGHDHGDGVREEIETAEVAVIVPYRDLDPAQKRAAHLASFVPYMEEYLAKHVR---CQGGEFRLFIVEQSTDDGLKFNRGKLLNIGFDLALAEGFN---AFVFHDVDLLPSDELGKWYASRPERPAHIARVWKQYSNNPK 678
LP GW K S K+ ++ + T S W P + T + K + +T SH H+ +T + K S+ S+K+ G + E++ VA+IVP+RDL P Q R+ HLA F+P+M +L+K V+ CQ +F ++I++QS DDG KFNRGKLLNIGFD+A + F+FHDVDLLP D+LG WY P P HIAR W +YSNNPK
Sbjct: 16 LPAGWTKNYSNSQKRYFWCHAGTKTSQWHAPTAEEANDPTRAKQTADMKAKQEREDDEKTRKRSHSGGSNSAKNDHKSHKTGLGISVNSISNKSSKHTAGASASSAKKRQSGTNAGNIDLSESSNVAIIVPFRDLHPEQNRSKHLAKFLPHMTSFLSKLVKAGKCQ--DFHIYIIDQS-DDGRKFNRGKLLNIGFDIAKKSKMHKHDVFIFHDVDLLPGDDLGNWYTRFPRNPIHIARCWGRYSNNPK 260
BLAST of mRNA_H-elongata_contig71284.14792.1 vs. uniprot
Match: A0A2R5GHL6_9STRA (Beta-1,4-galactosyltransferase 4 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GHL6_9STRA) HSP 1 Score: 144 bits (364), Expect = 5.900e-38 Identity = 88/228 (38.60%), Postives = 123/228 (53.95%), Query Frame = 1
Query: 10 EHNGRQLPPGWVKGESLRHKKSYFFNTQTGESSWLPPESTPAVAGKTGITGEIETYGASHVVHELEETVFPAVKRSRQENPLLPPSSKEVGHDHGDGVREEIETAEVAVIVPYRDLDPAQKRAAHLASFVPYMEEYLAKHVRCQGGEFRLFIVEQSTDDGLKFNRGKLLNIGFDLAL----AEG-FNAFVFHDVDLLPSDELGKWYASRPERPAHIARVWKQYSNNPK 678
E + R LP GW + S + Y+F TG+S W E A + + +S V++ + +KRS+++ G + + VA+IVP+RDL AQKR L FVP+M ++L+ + F +FIVEQS DDG KFNRGKLLNIGF +A +G F++F+FHDVDLLP + L WYA +P P HIA+ W +Y+NNPK
Sbjct: 19 EDDHRALPQGWEQCMSKSQNRIYYFQKATGKSVWTRKEVFDAERTSESDRKKRDRDASSDHVNDSD------LKRSKRQG----------------GAEDRDDRRRVAIIVPFRDLHQAQKRKEQLDKFVPHMHQFLSDNKEI--ASFHIFIVEQS-DDGRKFNRGKLLNIGFKIAADPDHEDGPFDSFIFHDVDLLPQEALKPWYAKQPNVPLHIAKCWGRYNNNPK 221 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig71284.14792.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig71284.14792.1 >prot_H-elongata_contig71284.14792.1 ID=prot_H-elongata_contig71284.14792.1|Name=mRNA_H-elongata_contig71284.14792.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=227bp MTREHNGRQLPPGWVKGESLRHKKSYFFNTQTGESSWLPPESTPAVAGKTback to top mRNA from alignment at H-elongata_contig71284:591..1488- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig71284.14792.1 ID=mRNA_H-elongata_contig71284.14792.1|Name=mRNA_H-elongata_contig71284.14792.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=898bp|location=Sequence derived from alignment at H-elongata_contig71284:591..1488- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig71284:591..1488- >mRNA_H-elongata_contig71284.14792.1 ID=mRNA_H-elongata_contig71284.14792.1|Name=mRNA_H-elongata_contig71284.14792.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1362bp|location=Sequence derived from alignment at H-elongata_contig71284:591..1488- (Himanthalia elongata Himel1 dioecious)back to top |