mRNA_H-elongata_contig71207.14782.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig71207.14782.1
Unique NamemRNA_H-elongata_contig71207.14782.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig71207.14782.1 vs. uniprot
Match: D7G6X6_ECTSI (RL10P_insert domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6X6_ECTSI)

HSP 1 Score: 318 bits (814), Expect = 3.270e-108
Identity = 160/191 (83.77%), Postives = 176/191 (92.15%), Query Frame = 1
Query:    1 MPRSRREQKVSLTKTAKKGRELKQGIVSEVRKCVDNYPSVYVFSFLNMRSKLLKEVRLDFRKDSRFFMGKNKVMVLALGKSEADEYQDNLREIGKRLKGQVGLLFTSRPREEVQSYFRNLAVADFPPPGFVHAETIVLPKGSLGTWPVSMLDQFRKLGVVAEVEDGVLVNRKEIDMCTAGEPITPEGAKLL 573
            MPRS+R QKVSLTKT+KKGRELKQGIVSEVRKCVD YPSVYVFSF+N+RSKLLKEVRLDFR+DSRFFMGKNKVM+LALGKSE DEYQDNLR++ KRLKGQVGLLFT RP EEV++YF+ LAVAD  PPGFVH ETI LP GSLG WPVSM++QFRKLGVV EVE+GVLVNRK I+MCTAGEPI+PEGAKLL
Sbjct:    1 MPRSQRNQKVSLTKTSKKGRELKQGIVSEVRKCVDEYPSVYVFSFVNLRSKLLKEVRLDFREDSRFFMGKNKVMILALGKSEQDEYQDNLRQVSKRLKGQVGLLFTRRPAEEVKTYFKALAVADHAPPGFVHDETIPLPTGSLGDWPVSMMEQFRKLGVVVEVEEGVLVNRKAINMCTAGEPISPEGAKLL 191          
BLAST of mRNA_H-elongata_contig71207.14782.1 vs. uniprot
Match: A0A835Z2W2_9STRA (Ribosome assembly factor mrt4 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2W2_9STRA)

HSP 1 Score: 204 bits (519), Expect = 3.630e-63
Identity = 106/191 (55.50%), Postives = 137/191 (71.73%), Query Frame = 1
Query:    1 MPRSRREQKVSLTKTAKKGRELKQGIVSEVRKCVDNYPSVYVFSFLNMRSKLLKEVRLDFRKDSRFFMGKNKVMVLALGKSEADEYQDNLREIGKRLKGQVGLLFTSRPREEVQSYFRNLAVADFPPPGFVHAETIVLPKGSLGTWPVSMLDQFRKLGVVAEVEDGVLVNRKEIDMCTAGEPITPEGAKLL 573
            MP+S+R + VSLT TAKKGR LKQ ++ ++R  +D++  ++VF + NMRS+L+K+VRLDFR DSRFFMGKN +M  ALG S  DEY DNLR++ + ++GQ GLL T+R +E V SYF +LAV +F   GF   ETI LP G    WPV M+DQ RKLG+  EV+D  L  RKE DMC  G+ +TPE AKLL
Sbjct:    1 MPKSKRNKTVSLTSTAKKGRTLKQAVIKDIRDHIDSHQRLFVFRYDNMRSRLMKDVRLDFRGDSRFFMGKNTIMQRALGTSVEDEYSDNLRQVSRHIRGQCGLLVTNRSQEAVLSYFADLAVPEFANAGFFAQETITLPVGPT-QWPVGMMDQLRKLGLQVEVQDSQLWLRKECDMCKKGQALTPEQAKLL 190          
BLAST of mRNA_H-elongata_contig71207.14782.1 vs. uniprot
Match: A0A6V1SP53_HETAK (Ribosome assembly factor mrt4 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1SP53_HETAK)

HSP 1 Score: 190 bits (483), Expect = 4.450e-58
Identity = 102/191 (53.40%), Postives = 133/191 (69.63%), Query Frame = 1
Query:    1 MPRSRREQKVSLTKTAKKGRELKQGIVSEVRKCVDNYPSVYVFSFLNMRSKLLKEVRLDFRKDSRFFMGKNKVMVLALGKSEADEYQDNLREIGKRLKGQVGLLFTSRPREEVQSYFRNLAVADFPPPGFVHAETIVLPKGSLGTWPVSMLDQFRKLGVVAEVEDGVLVNRKEIDMCTAGEPITPEGAKLL 573
            MP+S+R++KVSLTKT  KGR+ KQ +V +VR+ +D + ++Y F F NMRS   KE R D+R DSRFF+GKNK+M +ALG++  DEYQD LR I K L G VGLL TSRPR+EV+SYF N +  DF   G +  ET+ L +GSL  +P  M+ + RKLG+  EV D VL   ++  +C AGEPI  E AKLL
Sbjct:    1 MPKSKRDKKVSLTKTDSKGRQQKQKMVQKVREAIDEFDALYTFRFDNMRSNNFKECRADWR-DSRFFLGKNKLMQIALGRTPEDEYQDGLRSISKELVGNVGLLMTSRPRDEVESYFSNFSKKDFAKAGAIAPETVTLERGSLN-FPAYMMSEIRKLGLTVEVRDAVLELMEDATICVAGEPIGVEAAKLL 189          
BLAST of mRNA_H-elongata_contig71207.14782.1 vs. uniprot
Match: M4C3P0_HYAAE (Ribosome assembly factor mrt4 n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C3P0_HYAAE)

HSP 1 Score: 187 bits (474), Expect = 1.790e-56
Identity = 95/191 (49.74%), Postives = 136/191 (71.20%), Query Frame = 1
Query:    1 MPRSRREQKVSLTKTAKKGRELKQGIVSEVRKCVDNYPSVYVFSFLNMRSKLLKEVRLDFRKDSRFFMGKNKVMVLALGKSEADEYQDNLREIGKRLKGQVGLLFTSRPREEVQSYFRNLAVADFPPPGFVHAETIVLPKGSLGTWPVSMLDQFRKLGVVAEVEDGVLVNRKEIDMCTAGEPITPEGAKLL 573
            MP+S+R++  +LT+  KKG ELK+ +V  +R  VD Y S YVFSF NMR+   K+VR+DF KDSRFF+GKNKVM LALG+S+ DEY +NL  + K + G  GLLFT++PR+EV  YF  L+V+D+P  GFV  +TI +P+G L  +  SML+  R LG+  ++++GV++  +   +C +G+ +TPE AKLL
Sbjct:    1 MPKSKRQRTKTLTQANKKGNELKKNVVEAIRNAVDTYESAYVFSFQNMRTSHFKDVRMDF-KDSRFFLGKNKVMKLALGRSKEDEYAENLFRLSKDVSGNTGLLFTNKPRDEVVDYFAKLSVSDYPRAGFVATDTITIPEGPLPQFIGSMLESLRGLGLPVDLKNGVVMLSRNYTICKSGQTLTPEQAKLL 190          
BLAST of mRNA_H-elongata_contig71207.14782.1 vs. uniprot
Match: H3GA64_PHYRM (Ribosome assembly factor mrt4 n=24 Tax=Phytophthora TaxID=4783 RepID=H3GA64_PHYRM)

HSP 1 Score: 186 bits (471), Expect = 5.080e-56
Identity = 96/191 (50.26%), Postives = 133/191 (69.63%), Query Frame = 1
Query:    1 MPRSRREQKVSLTKTAKKGRELKQGIVSEVRKCVDNYPSVYVFSFLNMRSKLLKEVRLDFRKDSRFFMGKNKVMVLALGKSEADEYQDNLREIGKRLKGQVGLLFTSRPREEVQSYFRNLAVADFPPPGFVHAETIVLPKGSLGTWPVSMLDQFRKLGVVAEVEDGVLVNRKEIDMCTAGEPITPEGAKLL 573
            MP+S+R++   LT+  KKG ELKQ +V  +R  VD Y S YVFSF NMR+   K+VR+DF KDSRFF+GKNKVM LALG+S+ +EY +NL  + K + G  GLLFT++P EEV +YF  L+V+D P  GFV  ET+ +P+G L  +  SML+  R LG+  ++++GV+V  +   +C  G+ +TPE AKLL
Sbjct:    1 MPKSKRQRTKPLTQANKKGNELKQNVVEAIRNAVDTYASAYVFSFQNMRTNHFKDVRMDF-KDSRFFLGKNKVMKLALGRSKEEEYAENLFRLSKDVSGSTGLLFTNKPHEEVVAYFAKLSVSDHPRSGFVATETVTIPEGPLPQFIGSMLESLRGLGLPVDLKNGVIVLSRNYTICKPGQTLTPEQAKLL 190          
BLAST of mRNA_H-elongata_contig71207.14782.1 vs. uniprot
Match: I2CRG5_NANGC (Ribosome assembly factor mrt4 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CRG5_NANGC)

HSP 1 Score: 185 bits (470), Expect = 8.620e-56
Identity = 104/193 (53.89%), Postives = 133/193 (68.91%), Query Frame = 1
Query:    1 MPRSRREQKVSLTKTAKKGRELKQGIVSEVRKCVDNYPSVYVFSFLNMRSKLLKEVRLDFRKDSRFFMGKNKVMVLALGKSEADEYQDNLREIGKRLKGQVGLLFTSRPREEVQSYFRNLAVADFPPPGFVHAETIVLP--KGSLGTWPVSMLDQFRKLGVVAEVEDGVLVNRKEIDMCTAGEPITPEGAKLL 573
            MPRSRR+QKVSLTKT  KG+E K G +++VR+ +D++ S+YVFSF +MRS   K+VR+D+R DSRFFMGKNKVM  ALG    DE++DNLR + KRL GQVGLL T+R REEV +YF N  V DF  PG +    + L   K  L  +P SM   FRKLG+  E ++G LV  +   +C  G+ ITPE AKL+
Sbjct:   22 MPRSRRDQKVSLTKTTSKGKEQKAGTIAKVREALDSFTSLYVFSFQHMRSSKFKDVRIDWR-DSRFFMGKNKVMQKALGLLPEDEFRDNLRFLSKRLSGQVGLLATNRSREEVLTYFENFKVQDFAKPGVIADADVTLEPSKDPLHFFPTSMFQLFRKLGLNLETKNGKLVLLEAFPVCRKGKAITPEQAKLM 213          
BLAST of mRNA_H-elongata_contig71207.14782.1 vs. uniprot
Match: A0A3F2RLT2_9STRA (Ribosome assembly factor mrt4 n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RLT2_9STRA)

HSP 1 Score: 183 bits (465), Expect = 4.630e-55
Identity = 95/191 (49.74%), Postives = 132/191 (69.11%), Query Frame = 1
Query:    1 MPRSRREQKVSLTKTAKKGRELKQGIVSEVRKCVDNYPSVYVFSFLNMRSKLLKEVRLDFRKDSRFFMGKNKVMVLALGKSEADEYQDNLREIGKRLKGQVGLLFTSRPREEVQSYFRNLAVADFPPPGFVHAETIVLPKGSLGTWPVSMLDQFRKLGVVAEVEDGVLVNRKEIDMCTAGEPITPEGAKLL 573
            MP+S+R++  +LT+  KKG  LKQ +V  VR  VD Y S YVFSF NMR+   K+VR+DF KDSRFF+GKNKVM LALG+S+ +EY +NL  + K + G  GLLFT++P EEV  YF  L+V+D+P  GFV  ET+ +P+G L  +  SM++  R LG+  +++ GV+V  +   +C  G+ +TPE AKLL
Sbjct:    1 MPKSKRQRTKALTQADKKGNALKQNVVDAVRNAVDTYTSAYVFSFQNMRTNHFKDVRMDF-KDSRFFLGKNKVMKLALGRSKEEEYAENLFRLSKDVSGNTGLLFTNKPHEEVLDYFSKLSVSDYPRSGFVVTETVTVPEGPLPQFIGSMIESLRGLGLPVDLKKGVVVLSQNYTICKTGQAVTPEQAKLL 190          
BLAST of mRNA_H-elongata_contig71207.14782.1 vs. uniprot
Match: A0A3M6VK82_9STRA (Ribosome assembly factor mrt4 n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VK82_9STRA)

HSP 1 Score: 181 bits (458), Expect = 4.690e-54
Identity = 92/191 (48.17%), Postives = 130/191 (68.06%), Query Frame = 1
Query:    1 MPRSRREQKVSLTKTAKKGRELKQGIVSEVRKCVDNYPSVYVFSFLNMRSKLLKEVRLDFRKDSRFFMGKNKVMVLALGKSEADEYQDNLREIGKRLKGQVGLLFTSRPREEVQSYFRNLAVADFPPPGFVHAETIVLPKGSLGTWPVSMLDQFRKLGVVAEVEDGVLVNRKEIDMCTAGEPITPEGAKLL 573
            MP+S+R++   LT+  KKGRELK+ +V  +R  VD Y S Y FS+ NMR+   K VR+DF KDSRFF+GKNKVM LALG+S+ +EY +NL  + K + G  GLLFT++P EEV  YF  L+V+D P  GFV  ET+ +P+G L  +  SM++  R LG+  ++++G +V  +   +C  G+ +TPE AKLL
Sbjct:    1 MPKSKRQRTKPLTQANKKGRELKKNVVDSIRNAVDTYESAYAFSYQNMRTNHFKNVRMDF-KDSRFFLGKNKVMKLALGRSKEEEYAENLYRLSKDVSGNTGLLFTNKPHEEVMDYFVKLSVSDHPRSGFVATETVTIPEGPLPQFIGSMMESLRGLGLPVDLKNGAIVLSRNYTICKPGQTLTPEQAKLL 190          
BLAST of mRNA_H-elongata_contig71207.14782.1 vs. uniprot
Match: A0A7N8WN23_9TELE (Ribosome assembly factor mrt4 n=1 Tax=Mastacembelus armatus TaxID=205130 RepID=A0A7N8WN23_9TELE)

HSP 1 Score: 179 bits (455), Expect = 1.290e-53
Identity = 92/191 (48.17%), Postives = 134/191 (70.16%), Query Frame = 1
Query:    1 MPRSRREQKVSLTKTAKKGRELKQGIVSEVRKCVDNYPSVYVFSFLNMRSKLLKEVRLDFRKDSRFFMGKNKVMVLALGKSEADEYQDNLREIGKRLKGQVGLLFTSRPREEVQSYFRNLAVADFPPPGFVHAETIVLPKGSLGTWPVSMLDQFRKLGVVAEVEDGVLVNRKEIDMCTAGEPITPEGAKLL 573
            MP+S+R++K+SLTKTAKKG ELKQ ++ E+RKCVD Y  +++FS  NMR+  LK++R  + K SRFF GKNKVM++ALGK E DEY+DNL ++ K L+G+VG+LFT++ R+EVQ YF N    D+   G      + L +G L  +P SM  Q R+LG+   ++ GV+   K+ ++C  G+ +TPE A++L
Sbjct:    1 MPKSKRDKKISLTKTAKKGLELKQKLIEELRKCVDTYRHLFIFSVANMRNNKLKDIRTAW-KHSRFFFGKNKVMMIALGKGETDEYKDNLHKVSKYLRGEVGVLFTNKTRDEVQEYFSNFKDMDYARAGNQAQMDVTLDEGPLEQFPHSMEPQLRQLGLPTALKKGVVTLLKDYEVCKDGDVLTPEQARIL 190          
BLAST of mRNA_H-elongata_contig71207.14782.1 vs. uniprot
Match: A0A484EG03_BRELC (Ribosome assembly factor mrt4 n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EG03_BRELC)

HSP 1 Score: 179 bits (455), Expect = 1.330e-53
Identity = 92/191 (48.17%), Postives = 130/191 (68.06%), Query Frame = 1
Query:    1 MPRSRREQKVSLTKTAKKGRELKQGIVSEVRKCVDNYPSVYVFSFLNMRSKLLKEVRLDFRKDSRFFMGKNKVMVLALGKSEADEYQDNLREIGKRLKGQVGLLFTSRPREEVQSYFRNLAVADFPPPGFVHAETIVLPKGSLGTWPVSMLDQFRKLGVVAEVEDGVLVNRKEIDMCTAGEPITPEGAKLL 573
            MP+S+R++   LTK  KKG ELK+ +V  +R  V+ Y S++VF+F NMRS   K+VR++F KDSRFF+GKNKVM LALG+S+ +EY  NL  +   + G  GLLFTS+P +EV +YF  L++ DFP  GFV  ET+ +P+G L  +  SML+  R LG+  ++  G +V  +   +C AG+ +TPE AKLL
Sbjct:    1 MPKSKRQRTKPLTKANKKGNELKKSVVDAIRNAVNTYDSIFVFTFQNMRSNHFKDVRMEF-KDSRFFLGKNKVMKLALGRSKEEEYAQNLHCLSNDVSGNTGLLFTSKPYDEVTTYFAKLSIRDFPRSGFVATETVSIPEGPLSQFTGSMLESLRGLGLPVDLRKGTIVLSQNYTICKAGQSLTPEQAKLL 190          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig71207.14782.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6X6_ECTSI3.270e-10883.77RL10P_insert domain-containing protein n=2 Tax=Ect... [more]
A0A835Z2W2_9STRA3.630e-6355.50Ribosome assembly factor mrt4 n=1 Tax=Tribonema mi... [more]
A0A6V1SP53_HETAK4.450e-5853.40Ribosome assembly factor mrt4 n=1 Tax=Heterosigma ... [more]
M4C3P0_HYAAE1.790e-5649.74Ribosome assembly factor mrt4 n=1 Tax=Hyaloperonos... [more]
H3GA64_PHYRM5.080e-5650.26Ribosome assembly factor mrt4 n=24 Tax=Phytophthor... [more]
I2CRG5_NANGC8.620e-5653.89Ribosome assembly factor mrt4 (Fragment) n=1 Tax=N... [more]
A0A3F2RLT2_9STRA4.630e-5549.74Ribosome assembly factor mrt4 n=1 Tax=Phytophthora... [more]
A0A3M6VK82_9STRA4.690e-5448.17Ribosome assembly factor mrt4 n=1 Tax=Peronospora ... [more]
A0A7N8WN23_9TELE1.290e-5348.17Ribosome assembly factor mrt4 n=1 Tax=Mastacembelu... [more]
A0A484EG03_BRELC1.330e-5348.17Ribosome assembly factor mrt4 n=1 Tax=Bremia lactu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig71207contigH-elongata_contig71207:2064..3039 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score321.6
Seed ortholog evalue2.4e-85
Seed eggNOG ortholog2880.D7G6X6
Preferred nameMRTO4
KEGG koko:K14815
GOsGO:0000027,GO:0000956,GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006401,GO:0006402,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0015934,GO:0016043,GO:0016070,GO:0016071,GO:0016072,GO:0019222,GO:0019439,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030684,GO:0030687,GO:0031974,GO:0031981,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034655,GO:0034660,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065003,GO:0065007,GO:0070013,GO:0070180,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1990904
EggNOG free text desc.ribosomal large subunit assembly
EggNOG OGsCOG0244@1,KOG0816@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03009
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionRibosomal protein L10/acidic P0
Ec32 orthologEc-01_011870.1
Exons2
Model size573
Cds size573
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931111.887024-CDS-H-elongata_contig71207:2063..23631622931111.887024-CDS-H-elongata_contig71207:2063..2363Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig71207 2064..2363 +
1691679702.9847522-CDS-H-elongata_contig71207:2063..23631691679702.9847522-CDS-H-elongata_contig71207:2063..2363Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig71207 2064..2363 +
1622931111.8995595-CDS-H-elongata_contig71207:2766..30391622931111.8995595-CDS-H-elongata_contig71207:2766..3039Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig71207 2767..3039 +
1691679702.9970224-CDS-H-elongata_contig71207:2766..30391691679702.9970224-CDS-H-elongata_contig71207:2766..3039Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig71207 2767..3039 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig71207.14782.1prot_H-elongata_contig71207.14782.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig71207 2064..3039 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig71207.14782.1

>prot_H-elongata_contig71207.14782.1 ID=prot_H-elongata_contig71207.14782.1|Name=mRNA_H-elongata_contig71207.14782.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=191bp
MPRSRREQKVSLTKTAKKGRELKQGIVSEVRKCVDNYPSVYVFSFLNMRS
KLLKEVRLDFRKDSRFFMGKNKVMVLALGKSEADEYQDNLREIGKRLKGQ
VGLLFTSRPREEVQSYFRNLAVADFPPPGFVHAETIVLPKGSLGTWPVSM
LDQFRKLGVVAEVEDGVLVNRKEIDMCTAGEPITPEGAKLL
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mRNA from alignment at H-elongata_contig71207:2064..3039+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig71207.14782.1 ID=mRNA_H-elongata_contig71207.14782.1|Name=mRNA_H-elongata_contig71207.14782.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=976bp|location=Sequence derived from alignment at H-elongata_contig71207:2064..3039+ (Himanthalia elongata Himel1 dioecious)
ATGCCACGATCACGCCGCGAGCAAAAGGTTTCTCTCACCAAGACAGCTAA GAAGGGTCGTGAGCTCAAGCAGGGGATCGTTAGTGAGGTGCGAAAGTGCG TGGATAATTACCCGAGCGTGTATGTATTCTCCTTCTTAAACATGAGGAGC AAACTTCTTAAAGAGGTGCGATTGGACTTCAGGAAAGACAGCCGCTTCTT TATGGGCAAAAACAAAGTAATGGTCCTCGCCCTCGGGAAGTCGGAGGCGG ACGAGTACCAGGATAACTTGAGAGAAATCGGCAAGAGATTGAAAGGCCAG GTGAGAGTACGTGATTGGATTTTTCGCCTCTCTGTTATGTTCCGCCGATG CCAACACCGCACGATAATGCCCAGCGCGGCATTGCGTGGCCGTAAGACCA TAAAAAACAACTGACCTCAAAAGAAGGGCGCCATGGACGTCATTGGTGTT TATACAGTTGTTTCACGTCTCCAATTCTGCACCAACTAACTGGGGCAGCT CAATTTCCTGTCCTGGCCCACTTTTCCACTTCCTCTGTATTTACGACGTG AAATATCTGGTGCACTCGGTCCTGCAAGCAAGACTTTGCTGTTGCCGAAC CAAGTTGATGAACGAACGTGCTCCTTAACCCTTTATCTCCCCTAAAATAC CTCAGCGTCGCCTCTGCACTCGTCTTCGGGCACGACAATATTGCGTGAAA CAGGTGGGGTTGCTTTTTACTAGCCGTCCGAGAGAGGAAGTGCAAAGCTA CTTCCGAAATCTCGCCGTTGCAGACTTCCCGCCCCCGGGGTTCGTTCACG CCGAAACGATCGTGCTCCCGAAGGGCTCGCTAGGGACCTGGCCCGTATCC ATGCTAGATCAGTTCAGGAAGCTGGGTGTGGTGGCCGAGGTGGAGGATGG AGTATTGGTTAACCGGAAGGAGATCGACATGTGTACAGCAGGAGAGCCCA TTACGCCAGAGGGGGCGAAGCTCTTG
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Coding sequence (CDS) from alignment at H-elongata_contig71207:2064..3039+

>mRNA_H-elongata_contig71207.14782.1 ID=mRNA_H-elongata_contig71207.14782.1|Name=mRNA_H-elongata_contig71207.14782.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1146bp|location=Sequence derived from alignment at H-elongata_contig71207:2064..3039+ (Himanthalia elongata Himel1 dioecious)
ATGCCACGATCACGCCGCGAGCAAAAGGTTTCTCTCACCAAGACAGCTAA
GAAGGGTCGTGAGCTCAAGCAGGGGATCGTTAGTGAGGTGCGAAAGTGCG
TGGATAATTACCCGAGCGTGTATGTATTCTCCTTCTTAAACATGAGGAGC
AAACTTCTTAAAGAGGTGCGATTGGACTTCAGGAAAGACAGCCGCTTCTT
TATGGGCAAAAACAAAGTAATGGTCCTCGCCCTCGGGAAGTCGGAGGCGG
ACGAGTACCAGGATAACTTGAGAGAAATCGGCAAGAGATTGAAAGGCCAG
ATGCCACGATCACGCCGCGAGCAAAAGGTTTCTCTCACCAAGACAGCTAA
GAAGGGTCGTGAGCTCAAGCAGGGGATCGTTAGTGAGGTGCGAAAGTGCG
TGGATAATTACCCGAGCGTGTATGTATTCTCCTTCTTAAACATGAGGAGC
AAACTTCTTAAAGAGGTGCGATTGGACTTCAGGAAAGACAGCCGCTTCTT
TATGGGCAAAAACAAAGTAATGGTCCTCGCCCTCGGGAAGTCGGAGGCGG
ACGAGTACCAGGATAACTTGAGAGAAATCGGCAAGAGATTGAAAGGCCAG
GTGGGGTTGCTTTTTACTAGCCGTCCGAGAGAGGAAGTGCAAAGCTACTT
CCGAAATCTCGCCGTTGCAGACTTCCCGCCCCCGGGGTTCGTTCACGCCG
AAACGATCGTGCTCCCGAAGGGCTCGCTAGGGACCTGGCCCGTATCCATG
CTAGATCAGTTCAGGAAGCTGGGTGTGGTGGCCGAGGTGGAGGATGGAGT
ATTGGTTAACCGGAAGGAGATCGACATGTGTACAGCAGGAGAGCCCATTA
CGCCAGAGGGGGCGAAGCTCTTGGTGGGGTTGCTTTTTACTAGCCGTCCG
AGAGAGGAAGTGCAAAGCTACTTCCGAAATCTCGCCGTTGCAGACTTCCC
GCCCCCGGGGTTCGTTCACGCCGAAACGATCGTGCTCCCGAAGGGCTCGC
TAGGGACCTGGCCCGTATCCATGCTAGATCAGTTCAGGAAGCTGGGTGTG
GTGGCCGAGGTGGAGGATGGAGTATTGGTTAACCGGAAGGAGATCGACAT
GTGTACAGCAGGAGAGCCCATTACGCCAGAGGGGGCGAAGCTCTTG
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