mRNA_H-elongata_contig71189.14780.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig71189.14780.1 vs. uniprot
Match: D7FPI4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPI4_ECTSI) HSP 1 Score: 113 bits (282), Expect = 3.110e-31 Identity = 66/74 (89.19%), Postives = 68/74 (91.89%), Query Frame = 1
Query: 1 AREEMEFAAESKETTYFDEEASAAKEAVEEAVGLFEEVLASVDVKKRTEIMRQSGLRVEQLKAELDQLLESDDH 222
AREEME+A ESKETTYFDEEA+AAKEAVEEAV LFEEVL SVD KKRTEIMR SGLRVEQLKAELDQLL SDDH
Sbjct: 11 AREEMEYAEESKETTYFDEEAAAAKEAVEEAVALFEEVLRSVDEKKRTEIMRSSGLRVEQLKAELDQLLISDDH 84
BLAST of mRNA_H-elongata_contig71189.14780.1 vs. uniprot
Match: A0A7S2CH79_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CH79_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 6.420e-15 Identity = 43/74 (58.11%), Postives = 56/74 (75.68%), Query Frame = 1
Query: 1 AREEMEFAAESKETTYFDEEASAAKEAVEEAVGLFEEVLASVDVKKRTEIMRQSGLRVEQLKAELDQLLESDDH 222
AREE+E A ESKETTY+DEEA A+EAVE A+ + ++L S++ R E R +GL++EQLKAEL+ LL SDDH
Sbjct: 26 AREEIEMAEESKETTYYDEEAEIAQEAVEAALAEYGDILNSLEEPARGEFQRGNGLKMEQLKAELEILLHSDDH 99
BLAST of mRNA_H-elongata_contig71189.14780.1 vs. uniprot
Match: A0A8B8MI30_ABRPR (uncharacterized protein LOC113873100 n=1 Tax=Abrus precatorius TaxID=3816 RepID=A0A8B8MI30_ABRPR) HSP 1 Score: 71.6 bits (174), Expect = 5.140e-14 Identity = 41/68 (60.29%), Postives = 51/68 (75.00%), Query Frame = 1
Query: 1 AREEMEFAAESKETTYFDEEASAAKEAVEEAVGLFEEVLASVDVKKRTEIMRQSGLRVEQLKAELDQL 204
AREE+E A ESK+T YFDEEA A+ AV E VGLFEE+LA + ++R + R GL++EQLKAEL QL
Sbjct: 88 AREEIEMALESKDTVYFDEEAECARAAVNEVVGLFEELLAKLPERERGALQRSMGLKIEQLKAELQQL 155
BLAST of mRNA_H-elongata_contig71189.14780.1 vs. uniprot
Match: A0A371F7D8_MUCPR (Uncharacterized protein (Fragment) n=1 Tax=Mucuna pruriens TaxID=157652 RepID=A0A371F7D8_MUCPR) HSP 1 Score: 69.3 bits (168), Expect = 3.740e-13 Identity = 38/68 (55.88%), Postives = 52/68 (76.47%), Query Frame = 1
Query: 1 AREEMEFAAESKETTYFDEEASAAKEAVEEAVGLFEEVLASVDVKKRTEIMRQSGLRVEQLKAELDQL 204
AREE+E A ESK+T YFDEEA A+ AV+E +G+FEE+LA + ++R + R GL++EQLKAE+ QL
Sbjct: 83 AREEIEMALESKDTVYFDEEAECARAAVKEVLGMFEELLAKLPERERGALQRSMGLKIEQLKAEIQQL 150
BLAST of mRNA_H-elongata_contig71189.14780.1 vs. uniprot
Match: UPI00125E2BE0 (uncharacterized protein LOC116014478 n=1 Tax=Ipomoea triloba TaxID=35885 RepID=UPI00125E2BE0) HSP 1 Score: 68.9 bits (167), Expect = 6.370e-13 Identity = 41/70 (58.57%), Postives = 53/70 (75.71%), Query Frame = 1
Query: 1 AREEMEFAAESKETTYFDEEASAAKEAVEEAVGLFEEVLASVDVKKRTEIMRQSGLRVEQLKAELDQLLE 210
AREE+E A ESKET YFDEEA A+ AV+E +GL+E +LA V+ ++ I R GL++EQLKAEL+QL E
Sbjct: 93 AREEIESAMESKETVYFDEEAECARAAVKEVLGLYEGLLAKVNENEKGVIQRSMGLKIEQLKAELEQLNE 162
BLAST of mRNA_H-elongata_contig71189.14780.1 vs. uniprot
Match: I3T868_LOTJA (Uncharacterized protein n=1 Tax=Lotus japonicus TaxID=34305 RepID=I3T868_LOTJA) HSP 1 Score: 67.8 bits (164), Expect = 1.430e-12 Identity = 39/68 (57.35%), Postives = 49/68 (72.06%), Query Frame = 1
Query: 1 AREEMEFAAESKETTYFDEEASAAKEAVEEAVGLFEEVLASVDVKKRTEIMRQSGLRVEQLKAELDQL 204
AREE++ A ESKET YF+EEA A+ AV E VG+FE +LA + K R + R GL++EQLKAEL QL
Sbjct: 82 AREEIDMALESKETAYFNEEAECARAAVNEVVGMFERLLARLPEKDRAALQRSMGLKIEQLKAELQQL 149
BLAST of mRNA_H-elongata_contig71189.14780.1 vs. uniprot
Match: A0A484LV25_9ASTE (Uncharacterized protein n=1 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484LV25_9ASTE) HSP 1 Score: 65.9 bits (159), Expect = 1.890e-12 Identity = 40/70 (57.14%), Postives = 51/70 (72.86%), Query Frame = 1
Query: 1 AREEMEFAAESKETTYFDEEASAAKEAVEEAVGLFEEVLASVDVKKRTEIMRQSGLRVEQLKAELDQLLE 210
AREE+E A ESKET YFDEEA A++AV E + L+E +L + K+R I R GL++EQLKAEL+QL E
Sbjct: 20 AREEIESAMESKETLYFDEEAECARKAVNEVLELYEGLLEKLPEKEREAIQRSMGLKIEQLKAELEQLNE 89
BLAST of mRNA_H-elongata_contig71189.14780.1 vs. uniprot
Match: A0A2R6RNT0_ACTCC (Uncharacterized protein n=1 Tax=Actinidia chinensis var. chinensis TaxID=1590841 RepID=A0A2R6RNT0_ACTCC) HSP 1 Score: 67.0 bits (162), Expect = 3.770e-12 Identity = 39/70 (55.71%), Postives = 53/70 (75.71%), Query Frame = 1
Query: 1 AREEMEFAAESKETTYFDEEASAAKEAVEEAVGLFEEVLASVDVKKRTEIMRQSGLRVEQLKAELDQLLE 210
AREE+E A ESKET YF+EEA A++AV+E + ++E +LA + VK++ I R GL++EQLKAEL QL E
Sbjct: 95 AREEIETALESKETVYFNEEAECARDAVKEVLDMYEGLLAKLQVKEKGAIQRSMGLKIEQLKAELQQLNE 164
BLAST of mRNA_H-elongata_contig71189.14780.1 vs. uniprot
Match: A0A2G2ZQ26_CAPAN (Uncharacterized protein n=1 Tax=Capsicum annuum TaxID=4072 RepID=A0A2G2ZQ26_CAPAN) HSP 1 Score: 66.6 bits (161), Expect = 4.630e-12 Identity = 39/70 (55.71%), Postives = 52/70 (74.29%), Query Frame = 1
Query: 1 AREEMEFAAESKETTYFDEEASAAKEAVEEAVGLFEEVLASVDVKKRTEIMRQSGLRVEQLKAELDQLLE 210
AREE+E A ESKET YF+EEA A++AV+E + L++E+L V ++ I R GL++EQLKAELDQL E
Sbjct: 89 AREEIESAMESKETVYFNEEADCARDAVKEVLDLYQELLGKVSESEKGVIQRSMGLKIEQLKAELDQLNE 158
BLAST of mRNA_H-elongata_contig71189.14780.1 vs. uniprot
Match: UPI001C4FFF6E (embryogenesis-like protein n=1 Tax=Macadamia integrifolia TaxID=60698 RepID=UPI001C4FFF6E) HSP 1 Score: 64.3 bits (155), Expect = 6.760e-12 Identity = 36/68 (52.94%), Postives = 50/68 (73.53%), Query Frame = 1
Query: 1 AREEMEFAAESKETTYFDEEASAAKEAVEEAVGLFEEVLASVDVKKRTEIMRQSGLRVEQLKAELDQL 204
AREE+E A ESKET YFDEEA +A+EA + + +F+ +LA + +R + R GL++EQLKAEL+QL
Sbjct: 15 AREEIEMALESKETVYFDEEAESAREAAKVVLDMFQGLLAKLPENERASLQRSMGLKIEQLKAELEQL 82 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig71189.14780.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig71189.14780.1 >prot_H-elongata_contig71189.14780.1 ID=prot_H-elongata_contig71189.14780.1|Name=mRNA_H-elongata_contig71189.14780.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=71bp MEFAAESKETTYFDEEASAAKEAVEEAVGLFEEVLASVDVKKRTEIMRQSback to top mRNA from alignment at H-elongata_contig71189:543..1658- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig71189.14780.1 ID=mRNA_H-elongata_contig71189.14780.1|Name=mRNA_H-elongata_contig71189.14780.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1116bp|location=Sequence derived from alignment at H-elongata_contig71189:543..1658- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig71189:543..1658- >mRNA_H-elongata_contig71189.14780.1 ID=mRNA_H-elongata_contig71189.14780.1|Name=mRNA_H-elongata_contig71189.14780.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=426bp|location=Sequence derived from alignment at H-elongata_contig71189:543..1658- (Himanthalia elongata Himel1 dioecious)back to top |