mRNA_H-elongata_contig7098.14762.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig7098.14762.1
Unique NamemRNA_H-elongata_contig7098.14762.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig7098.14762.1 vs. uniprot
Match: A0A6H5KUR9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUR9_9PHAE)

HSP 1 Score: 340 bits (871), Expect = 3.070e-102
Identity = 281/556 (50.54%), Postives = 324/556 (58.27%), Query Frame = 1 
Query:    1 QVFLATCVVAFGPALVLEYVPAKKVDVTDATDAGSKAGRTQRLLLAFAGGGLMAEAALHLLPHLFMPXXXXXXXXXXXDHDGLGDACELIALGFLAAFAINRFTGGGKQKKAG-----------------------------------SGDLGYTALTTREEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGMKAVVAVAAPAADRIMENNSASPDSDDASDAVPAADVAVSPATESIAGVEEAVDATSTMRDGVDGEGLVGDVAPSSSAKSTVELPDKLEADAADAAAVTPSSESAVHQPELTLYGNPKTPATAVTMPMAEVAPAANEMDGDAAPPPEESSGATGPSDDRVASAGVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGANVTLAVDFLHNVIDGVGIGAAYALGGESMGHTTALLKLIHEIQHEVGDVATLVQCGMSKHHAIHIQHTTAGGVFLGVAISLGASAFPAGFLKTCLALSAGATFHLASGTVLGPVLAIPAEVGGSFQGFLEVAALAAGAAGVVAIGLAEKWAGLAH 1563
            +V  A  VVAFGPALVLEYVP  KVDV D + AGS+AGR QRLLLAFAGGGLMAEAALHLLPHLF+P            H+ L DAC LIA+GFLAAFAI+RF G  +Q++ G                                   SG+      TT      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +  +            ++E +SAS + + ++     A   +S   E       +  ++ + R G               A    EL  ++ A ++D+A   PSS      PELTLYGNPK                      DAA   EES     P+D  V+                                   GA VTLAVDFLHN+IDG+GIGAAYA+GG+++GH TA LKL+HE+QHE+GDVATLVQCGMSKHHAIHIQHTTA GVFLGVAISLGA AFP G L  CLALSAGATFHLASG VLGPVLAIPA+VGG  QG LEVAALAAGAAGVVAIGLAE WAG+ H
Sbjct:   29 KVLAAASVVAFGPALVLEYVPTSKVDVRDVSSAGSQAGRIQRLLLAFAGGGLMAEAALHLLPHLFLPKHDHDDHG----HESLADACTLIAVGFLAAFAIDRFVGVRQQRQHGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGDSGEAVPAGETTDANSEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDSTR-----------ELLEYSSASVEDEGSAAEAMLASACISQTPEK----RVSTASSESCRPG---------------APEVAELFPEV-ASSSDSAVAAPSS------PELTLYGNPK----------------------DAATGQEES-----PADAAVSKGHA--VLVRGGRGDAACIKGDHHQYHHDHGPADAGAYVTLAVDFLHNLIDGIGIGAAYAVGGDAVGHATAALKLVHEVQHEIGDVATLVQCGMSKHHAIHIQHTTAAGVFLGVAISLGAGAFPEGLLAACLALSAGATFHLASGPVLGPVLAIPADVGGPVQGVLEVAALAAGAAGVVAIGLAEGWAGIGH 514
[Close]
BLAST of mRNA_H-elongata_contig7098.14762.1 vs. uniprot
Match: D7G0G9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0G9_ECTSI)

HSP 1 Score: 109 bits (272), Expect = 2.140e-22
Identity = 77/162 (47.53%), Postives = 89/162 (54.94%), Query Frame = 1 
Query:  793 AVTPSSESAV---HQPELTLYGNPKTPATAVTMPMAEVAPAANEMDGDAAPPPEESSGATGPSDDRVASAGVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGANVTLAVDFLHNVIDGVGIGAAYALGGESMGHTTALLKLIHEIQHEVGDVATLVQCGM 1269
            AV PSS+SAV     PELTLYGNPK  AT       E +PA      DAA     +    G   D   S G                                GA VTLAVDFLHN+IDG+GIGAAYA+GG+++GH TA LKL+HE+QHE+GDVATLVQCGM
Sbjct:  126 AVAPSSDSAVAVPSSPELTLYGNPKDAATTGQ----EGSPA------DAAVSKGHAVLVRGGGGDAACSKG------------------DHHQDHHDHGPADAGAYVTLAVDFLHNLIDGIGIGAAYAVGGDAVGHATAALKLVHEVQHEIGDVATLVQCGM 259
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BLAST of mRNA_H-elongata_contig7098.14762.1 vs. uniprot
Match: A0A0P4W0J1_SCYOL (Uncharacterized protein n=2 Tax=Portunidae TaxID=6757 RepID=A0A0P4W0J1_SCYOL)

HSP 1 Score: 88.6 bits (218), Expect = 9.580e-15
Identity = 60/154 (38.96%), Postives = 86/154 (55.84%), Query Frame = 1 
Query: 1102 VTLAVDFLHNVIDGVGIGAAYALGGESMGHTTALLKLIHEIQHEVGDVATLVQCGMSKHHAIHIQHTTAGGVFLGVAISLGASAFPAGFLKTCLALSAGATFHLASGTVLGPVLAIPAEVGGSFQGFLEVAALAAGAAGVVAIGLAEKWAGLAH 1563
            + LA DF HN+ DG+ IGA++ L G+S+G  T L   +HEI HE+GD A L+Q G S+  A+ +Q  TA G F G  ISL A       +   L  +AG   ++A+ +V+  +L    E  G +Q  +EV AL AG   ++AI   E+  G  H
Sbjct:  259 LNLAADFTHNLTDGLAIGASF-LAGKSVGTVTTLTIFLHEIPHEIGDFAILLQSGCSRKKAMMLQLVTAVGAFTGTCISLLAEGTDESAVAWVLPFTAGGFIYIATVSVIPELL----ENSGFWQSVVEVVALLAGVMLMMAIAHLEETTGHEH 407
[Close]
BLAST of mRNA_H-elongata_contig7098.14762.1 vs. uniprot
Match: A0A7L2X3S5_PANHA (S39A7 protein (Fragment) n=7 Tax=Neognathae TaxID=8825 RepID=A0A7L2X3S5_PANHA)

HSP 1 Score: 82.0 bits (201), Expect = 1.680e-14
Identity = 57/143 (39.86%), Postives = 77/143 (53.85%), Query Frame = 1 
Query: 1102 VTLAVDFLHNVIDGVGIGAAYALGGESMGHTTALLKLIHEIQHEVGDVATLVQCGMSKHHAIHIQHTTAGGVFLGVAISLGASAFPAGFLKTCLALSAGATFHLASGTVLGPVLAIPAEVGGSFQGFLEVAALAAGAAGVVAI 1530
            + LA D  HN  DG+ IGA++ L G  +G  TA+  L+HE+ HEVGD A LVQ G SKH A+ +Q  TA G   G A SL A       +   L  +AG   ++ + +V+  +L       G  Q  L+V  L AG A +VAI
Sbjct:    7 LNLAADVAHNFTDGLAIGASF-LAGPGLGMVTAVTVLLHELPHEVGDFAILVQSGCSKHKAMRLQLVTALGAVAGAACSLLAEGAGEAAMLGVLPFTAGGFIYVGTVSVIPELL----RDAGPLQSLLQVLGLLAGVAMMVAI 144
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BLAST of mRNA_H-elongata_contig7098.14762.1 vs. uniprot
Match: A0A6H5KPX6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPX6_9PHAE)

HSP 1 Score: 84.3 bits (207), Expect = 1.940e-14
Identity = 60/148 (40.54%), Postives = 86/148 (58.11%), Query Frame = 1 
Query: 1102 VTLAVDFLHNVIDGVGIGAAYALGGESMGHTTALLKLIHEIQHEVGDVATLVQCGMSKHHAIHIQHTTAGGVFLGVAISLGASAFPAGFLKTCLALSAGATFHLASGTVLGPVLAIPAEVGGSF-QGFLEVAALAAGAAGVVAIGLAE 1542
            + LA D LHN+ DG+ IGA++A  G  +G +TAL  L+HE+ HE+GD A LVQ G +K  AI  Q  TA   FLG AI L A+ + AG  +  LA++ G   +++   V+  +L        SF QG  E+ A++AG A +  + L E
Sbjct:   89 LNLAADALHNLSDGIAIGASFA-SGSGLGFSTALATLLHELPHEIGDFAVLVQSGCTKWQAIGAQFATAIAAFLGTAIGLLATRY-AGMEQPLLAVTGGGFVYVSCVGVMPEILN---SGNPSFLQGVAEIGAMSAGIALMAIVALLE 231
[Close]
BLAST of mRNA_H-elongata_contig7098.14762.1 vs. uniprot
Match: UPI00129D9904 (zinc transporter SLC39A7-like n=1 Tax=Phasianus colchicus TaxID=9054 RepID=UPI00129D9904)

HSP 1 Score: 80.1 bits (196), Expect = 8.100e-14
Identity = 57/143 (39.86%), Postives = 79/143 (55.24%), Query Frame = 1 
Query: 1102 VTLAVDFLHNVIDGVGIGAAYALGGESMGHTTALLKLIHEIQHEVGDVATLVQCGMSKHHAIHIQHTTAGGVFLGVAISLGASAFPAGFLKTCLALSAGATFHLASGTVLGPVLAIPAEVGGSFQGFLEVAALAAGAAGVVAI 1530
            + LA D  HNV DG+ IGA++ + G ++G  TAL  L+HE+ HEVGD+A LVQ G SK  A+ +Q  TA G   G   SL A    A   +  L  +AG   ++ +  VL  +L     +    Q  L++AAL AG A + AI
Sbjct:    7 LNLAADVAHNVTDGLAIGASF-VAGPAVGTVTALTVLLHEVPHEVGDLAILVQSGCSKKQAMRLQLLTALGAVGGAGCSLLAEGVGAAATRWILPFTAGGFIYVGTVAVLPQLLREDVPM----QSLLQLAALLAGVAMMAAI 144
[Close]
BLAST of mRNA_H-elongata_contig7098.14762.1 vs. uniprot
Match: A0A7S2AQL9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AQL9_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 1.390e-13
Identity = 55/131 (41.98%), Postives = 75/131 (57.25%), Query Frame = 1 
Query: 1117 DFLHNVIDGVGIGAAYALGGESMGHTTALLKLIHEIQHEVGDVATLVQCGMSKHHAIHIQHTTAGGVFLGVAISLGASAFPAGFLKTCLALSAGATFHLASGTVLGPVLAIPAEVGGSFQGFLEVAALAAG 1509
            D LH+  DG+ IG ++A GG  +G  TAL  L HE+ HE+GD A LVQ G S + AI +Q  TA   F G A+ L ++   +GF    LAL +G   +LA+ TVL  +L   + +    Q   EVAA +AG
Sbjct:    2 DSLHSFTDGIAIGVSFA-GGNGIGIATALSVLAHELPHEIGDFAILVQSGCSANQAIKLQFCTAIFAFAGTAVGLLSADLSSGFSDLLLALVSGGFVYLATMTVLPDLLNANSSL---VQMTTEVAAFSAG 128
[Close]
BLAST of mRNA_H-elongata_contig7098.14762.1 vs. uniprot
Match: UPI00143D2727 (protein catecholamines up n=1 Tax=Belonocnema kinseyi TaxID=2817044 RepID=UPI00143D2727)

HSP 1 Score: 83.2 bits (204), Expect = 4.130e-13
Identity = 51/116 (43.97%), Postives = 68/116 (58.62%), Query Frame = 1 
Query: 1096 ANVTLAVDFLHNVIDGVGIGAAYALGGESMGHTTALLKLIHEIQHEVGDVATLVQCGMSKHHAIHIQHTTAGGVFLGVAISLGASAFPAGFLKTCLALSAGATFHLASGTVLGPVL 1443
            A + LA DFLHN  DG+ IGA+Y L GES+G+ T    L+HE+ HE+GD A L+Q G SK  AI +Q  TA G  LG  ISL A           L  +AG   ++A+ +V+  +L
Sbjct:  233 AYLNLAADFLHNFTDGLAIGASY-LAGESIGYVTTFTILLHEVPHEIGDFAILIQSGCSKKKAILLQLPTAVGALLGTYISLLAEGMGDFATSWILPFTAGGFIYIATVSVIPELL 347
[Close]
BLAST of mRNA_H-elongata_contig7098.14762.1 vs. uniprot
Match: A0A2L2YBF3_PARTP (Zinc transporter SLC39A7 (Fragment) n=2 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=A0A2L2YBF3_PARTP)

HSP 1 Score: 82.8 bits (203), Expect = 5.000e-13
Identity = 55/136 (40.44%), Postives = 75/136 (55.15%), Query Frame = 1 
Query: 1102 VTLAVDFLHNVIDGVGIGAAYALGGESMGHTTALLKLIHEIQHEVGDVATLVQCGMSKHHAIHIQHTTAGGVFLGVAISLGASAFPAGFLKTCLALSAGATFHLASGTVLGPVLAIPAEVGGSFQGFLEVAALAAG 1509
            + LA DF+HN  DG+ IGA+Y L G+S+G  T +  L+HEI HE+GD A L+Q G +K  AI +Q  TA G   G A SL A    A      L  +AG   ++A+ +V+  +L    E    +Q   EV AL  G
Sbjct:  225 LNLAADFMHNFTDGLAIGASY-LAGQSIGLVTTVTILLHEIPHEIGDFAILIQSGCTKRKAIMLQLLTAVGALTGTAFSLFAGGLNAAATNLILPFTAGGFIYIATVSVIPDLL----EETNFWQSVKEVIALIIG 355
[Close]
BLAST of mRNA_H-elongata_contig7098.14762.1 vs. uniprot
Match: A0A482XA38_LAOST (Uncharacterized protein n=2 Tax=Delphacidae TaxID=33362 RepID=A0A482XA38_LAOST)

HSP 1 Score: 82.8 bits (203), Expect = 6.350e-13
Identity = 53/136 (38.97%), Postives = 78/136 (57.35%), Query Frame = 1 
Query: 1102 VTLAVDFLHNVIDGVGIGAAYALGGESMGHTTALLKLIHEIQHEVGDVATLVQCGMSKHHAIHIQHTTAGGVFLGVAISLGASAFPAGFLKTCLALSAGATFHLASGTVLGPVLAIPAEVGGSFQGFLEVAALAAG 1509
            + LA DF HN  DG+ IGA+Y L G+++G  T +  L+HE+ HE+GD A L+Q G S+  AI++Q +TA G   G  ISL A    +   K  L  +AG   ++A+ +V+  +L    E    +Q   E+AAL  G
Sbjct:  250 LNLAADFAHNFTDGLAIGASY-LAGKNIGIVTTITILLHEVPHEIGDFAILIQSGCSRKKAIYLQLSTAVGAMTGTVISLLAKGIDSAATKWILPFTAGGFIYIATVSVIPELL----EDTKFWQSVKEIAALLLG 380
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7098.14762.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KUR9_9PHAE3.070e-10250.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0G9_ECTSI2.140e-2247.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A0P4W0J1_SCYOL9.580e-1538.96Uncharacterized protein n=2 Tax=Portunidae TaxID=6... [more]
A0A7L2X3S5_PANHA1.680e-1439.86S39A7 protein (Fragment) n=7 Tax=Neognathae TaxID=... [more]
A0A6H5KPX6_9PHAE1.940e-1440.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI00129D99048.100e-1439.86zinc transporter SLC39A7-like n=1 Tax=Phasianus co... [more]
A0A7S2AQL9_9STRA1.390e-1341.98Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
UPI00143D27274.130e-1343.97protein catecholamines up n=1 Tax=Belonocnema kins... [more]
A0A2L2YBF3_PARTP5.000e-1340.44Zinc transporter SLC39A7 (Fragment) n=2 Tax=Parast... [more]
A0A482XA38_LAOST6.350e-1338.97Uncharacterized protein n=2 Tax=Delphacidae TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig7098contigH-elongata_contig7098:5534..10351 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score111.3
Seed ortholog evalue1.2e-21
Seed eggNOG ortholog2880.D7G0G9
EggNOG free text desc.cellular zinc ion homeostasis
EggNOG OGsCOG0428@1,KOG2693@2759
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionZinc/iron permease
Ec32 orthologEc-19_003270.1
Exons5
Model size3087
Cds size1410
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931109.2753038-UTR-H-elongata_contig7098:5533..70541622931109.2753038-UTR-H-elongata_contig7098:5533..7054Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig7098 5534..7054 -
1691679701.8786836-UTR-H-elongata_contig7098:5533..70541691679701.8786836-UTR-H-elongata_contig7098:5533..7054Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig7098 5534..7054 -
1622931109.3604305-UTR-H-elongata_contig7098:9756..97951622931109.3604305-UTR-H-elongata_contig7098:9756..9795Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig7098 9757..9795 -
1691679701.9263403-UTR-H-elongata_contig7098:9756..97951691679701.9263403-UTR-H-elongata_contig7098:9756..9795Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig7098 9757..9795 -
1622931109.3750288-UTR-H-elongata_contig7098:10234..103511622931109.3750288-UTR-H-elongata_contig7098:10234..10351Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig7098 10235..10351 -
1691679701.9352968-UTR-H-elongata_contig7098:10234..103511691679701.9352968-UTR-H-elongata_contig7098:10234..10351Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig7098 10235..10351 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931109.2937608-CDS-H-elongata_contig7098:7054..73491622931109.2937608-CDS-H-elongata_contig7098:7054..7349Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7098 7055..7349 -
1691679701.8891397-CDS-H-elongata_contig7098:7054..73491691679701.8891397-CDS-H-elongata_contig7098:7054..7349Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7098 7055..7349 -
1622931109.3098161-CDS-H-elongata_contig7098:7728..78511622931109.3098161-CDS-H-elongata_contig7098:7728..7851Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7098 7729..7851 -
1691679701.897597-CDS-H-elongata_contig7098:7728..78511691679701.897597-CDS-H-elongata_contig7098:7728..7851Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7098 7729..7851 -
1622931109.3294463-CDS-H-elongata_contig7098:8204..83971622931109.3294463-CDS-H-elongata_contig7098:8204..8397Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7098 8205..8397 -
1691679701.9062166-CDS-H-elongata_contig7098:8204..83971691679701.9062166-CDS-H-elongata_contig7098:8204..8397Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7098 8205..8397 -
1622931109.3490026-CDS-H-elongata_contig7098:8957..97561622931109.3490026-CDS-H-elongata_contig7098:8957..9756Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7098 8958..9756 -
1691679701.9148905-CDS-H-elongata_contig7098:8957..97561691679701.9148905-CDS-H-elongata_contig7098:8957..9756Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7098 8958..9756 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig7098.14762.1prot_H-elongata_contig7098.14762.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig7098 7055..9756 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig7098.14762.1

>prot_H-elongata_contig7098.14762.1 ID=prot_H-elongata_contig7098.14762.1|Name=mRNA_H-elongata_contig7098.14762.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=470bp
MAEAALHLLPHLFMPHGDSHHGDSHHDHDGLGDACELIALGFLAAFAINR
FTGGGKQKKAGSGDLGYTALTTREEKGGAQEGSAAAGKEVESPAAAAATS
GALKTAGDEGGGGGEGMKAVVAVAAPAADRIMENNSASPDSDDASDAVPA
ADVAVSPATESIAGVEEAVDATSTMRDGVDGEGLVGDVAPSSSAKSTVEL
PDKLEADAADAAAVTPSSESAVHQPELTLYGNPKTPATAVTMPMAEVAPA
ANEMDGDAAPPPEESSGATGPSDDRVASAGVGGDGDGDKGDANHNRQHDH
GHHDEHHQDADAGANVTLAVDFLHNVIDGVGIGAAYALGGESMGHTTALL
KLIHEIQHEVGDVATLVQCGMSKHHAIHIQHTTAGGVFLGVAISLGASAF
PAGFLKTCLALSAGATFHLASGTVLGPVLAIPAEVGGSFQGFLEVAALAA
GAAGVVAIGLAEKWAGLAH*
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mRNA from alignment at H-elongata_contig7098:5534..10351-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig7098.14762.1 ID=mRNA_H-elongata_contig7098.14762.1|Name=mRNA_H-elongata_contig7098.14762.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4818bp|location=Sequence derived from alignment at H-elongata_contig7098:5534..10351- (Himanthalia elongata Himel1 dioecious)
CAGGTTTTCTTGGCGACGTGCGTGGTAGCGTTTGGGCCCGCCCTAGTGCT
GGAGTATGTGCCCGCAAAGAAGGTCGACGTGACGGACGCCACCGACGCCG
GATCGAAGGCAGGAAGGGTAAGGTTAAGGTTGATTCAGTCGGGCGAAATG
AAGAGCGGTAAAATGTACACGACTATCTGGAGTGTCTCATGAACTTCAAC
GTTTCCCTTCTGATGCCCCTCTGCTTCCCCTCTGCTGCGATGACCCCGAA
CTTGGCGAGTCACGAGCTGAGAGTTAAGAGCCCTCGTAGTTGCGCTCGTG
GCGTGGTCCTTGTGCGCTCATCGTGGTCCCTGAAAGGAATTATCTCTGCG
GACGGCGTCTTTGGTCATGTTCGCAGTTCCAAGGGAAAAAAAACATCGTT
GTATCCAGGCGCGCCTGCTTCTACGCCTCCGATAAACGACAAAACTCTTT
CGTCTTCCCCCCGCCACCCCCCAGCCGATTTTTTTCTGAGCCATTCTCTG
TACACGTTCGTTCTTTTTTCTACGGCTGGTGCTTTATCGCCGGTCGGAAC
GCGCAGACTCAGCGCCTTTTGCTGGCGTTCGCCGGGGGCGGTCTGATGGC
GGAGGCCGCGCTGCACCTTCTGCCGCACCTATTCATGCCCCACGGAGACT
CGCATCACGGAGATTCTCACCACGATCACGATGGCCTCGGGGATGCCTGC
GAGCTCATCGCGTTGGGGTTTCTGGCGGCGTTCGCGATCAACCGCTTCAC
GGGTGGTGGGAAGCAAAAGAAAGCTGGATCAGGCGATTTGGGGTATACCG
CGCTTACCACCCGCGAAGAGAAAGGAGGGGCGCAAGAAGGCAGCGCCGCT
GCGGGCAAAGAAGTCGAGAGCCCTGCTGCTGCTGCCGCCACGAGTGGAGC
GTTAAAGACTGCCGGTGACGAGGGCGGGGGCGGGGGCGAGGGCATGAAGG
CAGTCGTCGCAGTTGCTGCTCCTGCCGCTGACCGCATCATGGAAAACAAC
TCCGCGAGCCCTGATTCAGACGACGCCTCCGACGCCGTGCCGGCCGCCGA
TGTCGCCGTCTCTCCCGCCACGGAGTCTATTGCGGGGGTCGAGGAGGCCG
TTGACGCTACATCGACGATGCGTGATGGTGTCGATGGCGAAGGACTCGTC
GGGGATGTCGCTCCCTCTTCATCCGCCAAATCTACCGTCGAACTCCCCGA
CAAACTCGAAGCAGACGCCGCCGATGCGGCCGCCGTTACCCCGTCGTCGG
AGTCTGCGGTCCACCAACCCGAGCTCACGCTGTACGGTAACCCGAAGACG
CCCGCAACAGCAGTAACGATGCCGATGGCAGAGGTCGCTCCCGCAGCGAA
CGAGATGGACGGGGATGCTGCGCCGCCGCCCGAAGAGTCAAGCGGTGTGT
GGTTGCTCAGGGCGGCTGTCGAGAGATCACATCCTTCGTCCGTATTTGTT
TTCCCATTTTTTTTCAGCGTTGGCTAGTTTCGTGTTTCTACGTCACACTT
TTTTTTTCTTTTTCTCGTGGTTCCGCGGGGAGGGAGAAATACTTTTTTTC
ATCCTCCCATTGCCTTTATTCGACGAAGATAATGCAAATGCCTCTTCTCT
TTCGCCTTTTCGCGTCCCTTGGGAGGAGGGTTTACTCCCCTGTAATACCA
ATCTATATATCGATATATCTATATATGAAATACAGTATGTTAATACTTTT
CCTTAAAAACATATGAATTCATTCAAACTCTCCGAACATCCACGCCTTCT
TAGTACCGTGAGAGGTGCAGTCCAGGGAACCAACTATCGTCAGGTTCAAA
TGTATGTATAAAATTGTTACATGTGATTCATCGTGTTCCCCAATAGTAAA
TTCATCGGGTCAGTGGTATACTGTCGGTGAGAAGTCAACCATTATCCCGT
ATTGTTATGCGAAATAAGACCGTTTTTACGCTCTCGCCGGTATTGGATTA
GTAGGGGCTACCGGCCCCTCCGATGATCGCGTGGCGTCGGCTGGAGTTGG
CGGTGATGGCGATGGCGATAAAGGTGACGCCAACCACAACCGCCAGCATG
ACCACGGTCATCACGACGAGCACCACCAGGACGCGGATGCCGGGGCGAAC
GTGACACTCGCAGTCGACTTCTTGCATAACGTCATCGACGGCGTCGGGTG
TGTATGTGTATGCATGTGTGTGTGCGTGTGTGTTGTGCGTTCCGGCATCC
TAGGGGGGTGGGTTTTATGTATATACGTTATTAACCTGTGCGGGTTTTGT
TAGCGCGAAGCGAGAAGTAGGACAGCAATTATTACTTTGGGCTTGCGGCG
TATTTATAACGCACAGCCGGATGATAGAGGAAGGGGGATGGGGGGACTCC
CCGAGGAGATATTCGAGGATGTATCGATGCACTCCCTGTCCAAACAGCAG
CGCACGAGTTGCACTGTCAACACGAGATTCTCGGGGGAGTTTATTTGGTG
TTCGATACGTGACGGAATCCATGCGCGAACTGGTCCGCCGGCCGGGACAG
GATCGGCGCGGCTTACGCGCTGGGCGGCGAGTCGATGGGTCACACTACGG
CCCTGCTCAAACTGATCCACGAGATCCAGCACGAAGTTGGGGACGTCGCG
ACACTTGTCCAGTGCGGCATGAGGTGCGCTCAAGCGACGCGTAGACAGCA
TTCATTAGCCGTCGGACTCAGTTTCGGAACGTTTTTCCGGCTCCATTAGA
AACAAAGTGAAACCAAGGGGGATGGGGGGAGGGGAGGAATCAAGCATATG
CTGAACTGTTCCCGTTGACATTTGCATTTTGCGTATTTTCTGATCACTCC
TCTTTGGAGACAGTCACGCAATCTCCTGTGATTTACAATCCACATAGTAT
CCCCCGGCAGCCTTGTCGGCGAAAACACGGCATATCGCTCCGTCCCGGCA
TTGTTGGAATACTCGGTCTATGTCCGCTAGGATATTAAATGCATTTAACA
TAAAAACACCCCCCCACTTCTTTTTTCCTCCCGATGCCGCTCCGATATAC
AGCAAGCACCACGCGATTCATATCCAGCACACGACCGCCGGCGGCGTTTT
CCTTGGGGTCGCCATCAGCCTTGGCGCCAGCGCATTTCCGGCGGGCTTCC
TCAAGACGTGTCTCGCTCTGTCGGCCGGAGCAACCTTCCACCTGGCGTCG
GGAACGGTATTGGGACCAGTTCTTGCCATCCCCGCGGAGGTCGGCGGGTC
GTTCCAAGGTTTCCTGGAGGTTGCGGCGTTGGCCGCCGGGGCGGCTGGGG
TTGTGGCCATAGGCCTGGCAGAGAAGTGGGCCGGCCTCGCACACTGATTG
GTAGTGAGGTACGAGAATCCCACATCTTAATCATTACCCCTTTAATAATT
ATTTTGCCAGATGTAGGAGAAACTGGATGCATTAGAGAGCGCCAAGTTTC
GAGCTGATTTATACTCCCCGCCGTTAAAAAAAATCAGGGAACATCGATGC
CAAAGGTTTCGAGAATTTGTTTCTCCTACATATTATATTGGATTGGATTA
AGGTCGCTCCTCGTAGAGCAGATAAGACGAAGGCGGGGGACGCGGCGAGG
AGGCAAGACAAAAAAAATATCGTGGAGCTCCCATGCTGGGATCGGAATCG
GTTGGATTCTTGAGGTCGGGCACCCATATAATATATATATATACTTTTTT
CTATGATGCTCGCAGCCAGTAGGTTTCACCTCGCTCTCCCTGGTACGATT
TAATTCGACGGTTTTTGACGGGAGAGGAACTTACTGATGCCGATACAACT
CGCGGATGCTGATATCGTAAGCGGGAGGTTTATATGAGGGTCGGGAGGAG
ATCAGCGACGAATTTTAGCGAGTACATCTTTCACTCTGTCTTTTCTTTGG
ATGCCATGGGGATGGCTCCTAGGCCAAAAATGGTTCTAGAAACGTTCCAG
AGAGAACGAAAAAATAAATAAATGGCGCAACCTCCGTTTTTTCTTCTTCT
TGTGCTGCTTCCCCCTCCACTTTTTTTTTCTTCTTTTTTGTTTCTTTTTC
TCGTAGAACCGTTTGGCCTGGTCTGCTCGTCGTTGTCGTCATCATAGGTT
GGGTGCTCCAACACGATAAGAGACAAACATGATGGCGTTCTTTCGCGGGC
GGGTGGTAGACATCTGACTCCAGAGGATATACACGAGAACAACCTCCATA
TTCTATGCCACGAGAGGGGGGGGGAGTTTGGCAAACGAAAAATCCATGCG
TGCTCCCCCCCCCAACCCCCGCAAATGACGATCATGGTCATCGTCTTCAT
CCAGATTAATTTTGGTGCAAAGGCTGATGCTTCGGGACGAGTGATGGTTT
CTTCGGGTCGATTTTGCCTTTATTTTGAGACGATGGGGCGTGTGTGGCGT
TGATGCTGTAGAGTGAAGTATACTTGGTCCATCGTAAAATAAATTATCGC
CCGAGAAATCGCCAGAGAAGATGGACGCCGAGGCCTGGATGCCCAACCAA
AATAATCGGAAGGATCCGCGGTCATCAGATTCTGCTCTTATATCGTCGCG
GGAAAACTTGAGGAGATGGAACTATGCCCTCGGCGAAGACGGTAGTATGA
GTAGCAGGGAGCTGTTAATAACGTTCTCTTGTGTTCCACAAATTCGTCAA
GTCAAGTGCCGGCACGTTGCGACCCCAAGCGGACATGTCATTTTAGGATG
CGGCAGCTACGTCAGAGGCCAAAAGAGGAAGAAGGGTGACGCAAAACTTT
TTCTTGTATAATAGAGTTTTGTATAGTGATCGATGGAGCCCTCATGGGCC
CCCGCTGTATCACATGCCCAAGGATCTCCGTAGATCGGTATCGGAAGCAG
GGTAACCCAAACACCCCC
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Coding sequence (CDS) from alignment at H-elongata_contig7098:5534..10351-

>mRNA_H-elongata_contig7098.14762.1 ID=mRNA_H-elongata_contig7098.14762.1|Name=mRNA_H-elongata_contig7098.14762.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2820bp|location=Sequence derived from alignment at H-elongata_contig7098:5534..10351- (Himanthalia elongata Himel1 dioecious)
ATGGCGGAGGCCGCGCTGCACCTTCTGCCGCACCTATTCATGCCCCACGG
AGACTCGCATCACGGAGATTCTCACCACGATCACGATGGCCTCGGGGATG
CCTGCGAGCTCATCGCGTTGGGGTTTCTGGCGGCGTTCGCGATCAACCGC
TTCACGGGTGGTGGGAAGCAAAAGAAAGCTGGATCAGGCGATTTGGGGTA
TACCGCGCTTACCACCCGCGAAGAGAAAGGAGGGGCGCAAGAAGGCAGCG
CCGCTGCGGGCAAAGAAGTCGAGAGCCCTGCTGCTGCTGCCGCCACGAGT
GGAGCGTTAAAGACTGCCGGTGACGAGGGCGGGGGCGGGGGCGAGGGCAT
GAAGGCAGTCGTCGCAGTTGCTGCTCCTGCCGCTGACCGCATCATGGAAA
ACAACTCCGCGAGCCCTGATTCAGACGACGCCTCCGACGCCGTGCCGGCC
GCCGATGTCGCCGTCTCTCCCGCCACGGAGTCTATTGCGGGGGTCGAGGA
GGCCGTTGACGCTACATCGACGATGCGTGATGGTGTCGATGGCGAAGGAC
TCGTCGGGGATGTCGCTCCCTCTTCATCCGCCAAATCTACCGTCGAACTC
CCCGACAAACTCGAAGCAGACGCCGCCGATGCGGCCGCCGTTACCCCGTC
GTCGGAGTCTGCGGTCCACCAACCCGAGCTCACGCTGTACGGTAACCCGA
AGACGCCCGCAACAGCAGTAACGATGCCGATGGCAGAGGTCGCTCCCGCA
GCGAACGAGATGGACGGGGATGCTGCGCCGCCGCCCGAAGAGTCAAGCGA
TGGCGGAGGCCGCGCTGCACCTTCTGCCGCACCTATTCATGCCCCACGGA
GACTCGCATCACGGAGATTCTCACCACGATCACGATGGCCTCGGGGATGC
CTGCGAGCTCATCGCGTTGGGGTTTCTGGCGGCGTTCGCGATCAACCGCT
TCACGGGTGGTGGGAAGCAAAAGAAAGCTGGATCAGGCGATTTGGGGTAT
ACCGCGCTTACCACCCGCGAAGAGAAAGGAGGGGCGCAAGAAGGCAGCGC
CGCTGCGGGCAAAGAAGTCGAGAGCCCTGCTGCTGCTGCCGCCACGAGTG
GAGCGTTAAAGACTGCCGGTGACGAGGGCGGGGGCGGGGGCGAGGGCATG
AAGGCAGTCGTCGCAGTTGCTGCTCCTGCCGCTGACCGCATCATGGAAAA
CAACTCCGCGAGCCCTGATTCAGACGACGCCTCCGACGCCGTGCCGGCCG
CCGATGTCGCCGTCTCTCCCGCCACGGAGTCTATTGCGGGGGTCGAGGAG
GCCGTTGACGCTACATCGACGATGCGTGATGGTGTCGATGGCGAAGGACT
CGTCGGGGATGTCGCTCCCTCTTCATCCGCCAAATCTACCGTCGAACTCC
CCGACAAACTCGAAGCAGACGCCGCCGATGCGGCCGCCGTTACCCCGTCG
TCGGAGTCTGCGGTCCACCAACCCGAGCTCACGCTGTACGGTAACCCGAA
GACGCCCGCAACAGCAGTAACGATGCCGATGGCAGAGGTCGCTCCCGCAG
CGAACGAGATGGACGGGGATGCTGCGCCGCCGCCCGAAGAGTCAAGCGGG
GCTACCGGCCCCTCCGATGATCGCGTGGCGTCGGCTGGAGTTGGCGGTGA
TGGCGATGGCGATAAAGGTGACGCCAACCACAACCGCCAGCATGACCACG
GTCATCACGACGAGCACCACCAGGACGCGGATGCCGGGGCGAACGTGACA
CTCGCAGTCGACTTCTTGCATAACGTCATCGACGGCGTCGGGGGCTACCG
GCCCCTCCGATGATCGCGTGGCGTCGGCTGGAGTTGGCGGTGATGGCGAT
GGCGATAAAGGTGACGCCAACCACAACCGCCAGCATGACCACGGTCATCA
CGACGAGCACCACCAGGACGCGGATGCCGGGGCGAACGTGACACTCGCAG
TCGACTTCTTGCATAACGTCATCGACGGCGTCGGGATCGGCGCGGCTTAC
GCGCTGGGCGGCGAGTCGATGGGTCACACTACGGCCCTGCTCAAACTGAT
CCACGAGATCCAGCACGAAGTTGGGGACGTCGCGACACTTGTCCAGTGCG
GCATGAGGATCGGCGCGGCTTACGCGCTGGGCGGCGAGTCGATGGGTCAC
ACTACGGCCCTGCTCAAACTGATCCACGAGATCCAGCACGAAGTTGGGGA
CGTCGCGACACTTGTCCAGTGCGGCATGAGCAAGCACCACGCGATTCATA
TCCAGCACACGACCGCCGGCGGCGTTTTCCTTGGGGTCGCCATCAGCCTT
GGCGCCAGCGCATTTCCGGCGGGCTTCCTCAAGACGTGTCTCGCTCTGTC
GGCCGGAGCAACCTTCCACCTGGCGTCGGGAACGGTATTGGGACCAGTTC
TTGCCATCCCCGCGGAGGTCGGCGGGTCGTTCCAAGGTTTCCTGGAGGTT
GCGGCGTTGGCCGCCGGGGCGGCTGGGGTTGTGGCCATAGGCCTGGCAGA
GAAGTGGGCCGGCCTCGCACACTGACAAGCACCACGCGATTCATATCCAG
CACACGACCGCCGGCGGCGTTTTCCTTGGGGTCGCCATCAGCCTTGGCGC
CAGCGCATTTCCGGCGGGCTTCCTCAAGACGTGTCTCGCTCTGTCGGCCG
GAGCAACCTTCCACCTGGCGTCGGGAACGGTATTGGGACCAGTTCTTGCC
ATCCCCGCGGAGGTCGGCGGGTCGTTCCAAGGTTTCCTGGAGGTTGCGGC
GTTGGCCGCCGGGGCGGCTGGGGTTGTGGCCATAGGCCTGGCAGAGAAGT
GGGCCGGCCTCGCACACTGA
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