mRNA_H-elongata_contig7097.14760.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig7097.14760.1 vs. uniprot
Match: D7G348_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G348_ECTSI) HSP 1 Score: 345 bits (886), Expect = 1.470e-111 Identity = 200/498 (40.16%), Postives = 264/498 (53.01%), Query Frame = 1
Query: 7 DQIFIAEVVNNG--DGTLTATYESSFPGNYLIYVEAV------IDEGTAEAFWKPGTSVSSNIASAKHGVTRDGWVFQPKICVYDTFSYNDLMLLASVN-EPTWLLVLGSSIERGVYLTLVDMALGKGQKDDMSSSAIVKCWGYADITIGNLRITYQGYHWRFKNSTMSSLSEIGVGIHGVIPSDGTGLTRMESYCR*DPRATFLNPFPVSLPVPPPPRNKPTCQFLVTLGC*YLTSVKTTGR*TTAGIAMSAGSYWALYFSSETYDTTLYS*Y*DDSGRGRA*SPLQCSLSVPLKHLGFQAGAF*IIIFEE*HSREGE*RSS*NAVTLISTALSILNRQMYQAKLFENQNTRNEVRRYGSSQHYHHVAK-RNASETYNGAKMVHSTITEMLSHIVIATAIGTKAGLYKKVAAIPD-IGRQSTAIRRTFEMCTDCPARLLPFHVKPVPEPMCERVTSLPGNGQTGD---NELCPIWCMATKPTGQANTESGKVDVRVC 1458
+QI IAEVV++G +GTLTATY+S FPG Y +Y++ V + A+ FW+PGT +SSN+ASA HGV R+GWVFQP CV DTFSY DLMLLAS++ EPTWLLVLG S++RGV+LTL+DM L GQK+D+ SS + KCWGYAD+ +GNLR+TYQG +W +N TM++L +G+ G P+D GL +M+ Y D R +F++ FP MYQAKLFENQ +RN +RR+ +SQH+H V+ +A ET NG MVHSTITEML+++++ A+ TKA LY K AA D I + S + ++F++C+DCP LLPFHVK +PEP+C+ V SLPG +TG+ +LCP WCM P Q TES V VR C
Sbjct: 48 EQILIAEVVDDGSKNGTLTATYKSDFPGTYWVYIDEVELSRKDANNDIADTFWRPGTWLSSNVASAAHGVLRNGWVFQPISCVLDTFSYEDLMLLASLDKEPTWLLVLGGSVQRGVFLTLIDMVLAAGQKNDIISSVLRKCWGYADVQVGNLRLTYQGCYWTEENPTMTALKGVGIRFGGRWPNDDNGLGKMDGYQTRDSRVSFMSVFP-----------------------------------------------------------------------------------------------------------------------------------MYQAKLFENQKSRNGLRRFAASQHFHFVSTDASAPETRNGTIMVHSTITEMLANVMVGRAVETKAKLYAKAAASTDEIRKISAEVGKSFQVCSDCPGSLLPFHVKGIPEPVCDIVESLPGQAKTGEVWSGDLCPDWCMKQAPVSQTKTESDVVKVREC 414
BLAST of mRNA_H-elongata_contig7097.14760.1 vs. uniprot
Match: D7FXD9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXD9_ECTSI) HSP 1 Score: 333 bits (854), Expect = 3.360e-105 Identity = 198/543 (36.46%), Postives = 274/543 (50.46%), Query Frame = 1
Query: 1 NQDQIFIAEVVNNGD-GTLTATYESSFPGNYLIYVEAVI-------------------------------------DEGT---AEAFWKPGTSVSSNIASAKHGVTRDGWVFQPKICVYDTFSYNDLMLLASVN-EPTWLLVLGSSIERGVYLTLVDMALGKGQKDDMSSSAIVKCWGYADITIGNLRITYQGYHWRFKNSTMSSLSEIGVGIHGVI-----PSDGTGLTRMESYCR*DPRATFLNPFPVSLPVPPPPRNKPTCQFLVTLGC*YLTSVKTTGR*TTAGIAMSAGSYWALYFSSETYDTTLYS*Y*DDSGRGRA*SPLQCSLSVPLKHLGFQAGAF*IIIFEE*HSREGE*RSS*NAVTLISTALSILNRQMYQAKLFENQNTRNEVRRYGSSQHYHHVAKRNAS-ETYNGAKMVHSTITEMLSHIVIATAIGTKAGLYKKVAAIPDIGRQSTA-IRRTFEMCTDCPARLLPFHVKPVPEPMCERVTSLPGNGQTGD---NELCPIWCMATKPTGQANTESGKVDVRVC--KTD 1467
N+DQI IAE+V +G+ GTLTATY+S FPG+YL+YVE V ++G+ A+ FW+PGT +SSN+ASA HGV R+GWVFQPK CV+DTFSY DLMLLAS++ EPTWL+V+G S++RGV+LTLVDM L GQKDD+++S + KCWGY D+ +GNLR+TYQ +W N TM++L ++ + G P DG+ L++M+ Y D R +F++ FP MYQAK FEN+ ++ RRYG + HYH+++ ++ E +NG+ MVHST+TEML++++I A+ TKA L+ K AA D+ +Q A + ++F++C+DCP L+PFHVKP+P+P+CE SL G+ Q G+ ELCP WCM P Q T+SG VDVR C KTD
Sbjct: 126 NEDQILIAEIVGDGNTGTLTATYKSDFPGDYLVYVEEVQPSEQGEGLPIVGSPFSLKIAGDFPTLDVNSLPVCDSQEDGSNDIADTFWRPGTWLSSNVASAAHGVMRNGWVFQPKSCVFDTFSYQDLMLLASLDGEPTWLVVVGGSVQRGVFLTLVDMVLAAGQKDDIATSTLGKCWGYTDLLVGNLRLTYQDVYWYEGNPTMAALEDVSIAFTGGRASRRPPFDGSALSKMDGYQARDSRVSFMSAFP-----------------------------------------------------------------------------------------------------------------------------------MYQAKFFENEGSKQGTRRYGGNIHYHYISSAASNPEAHNGSIMVHSTMTEMLANVMIGRAVETKAALFAKAAASTDVNKQERADVGKSFQVCSDCPRDLMPFHVKPIPDPICETAESLRGDAQVGEVWNGELCPDWCMKQAPVSQLATQSGPVDVRECSLKTD 537
BLAST of mRNA_H-elongata_contig7097.14760.1 vs. uniprot
Match: A0A6H5JGZ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGZ7_9PHAE) HSP 1 Score: 333 bits (853), Expect = 4.070e-104 Identity = 223/555 (40.18%), Postives = 291/555 (52.43%), Query Frame = 1
Query: 1 NQDQIFIAEVVNNG--DGTLTATYESSFPGNYLIYVEAV------------------------------------IDEGT----AEAFWKPGTSVSSNIASAKHGVTRDGWVFQPKICVYDTFSYNDLMLLASVN-EPTWLLVLGSSIERGVYLTLVDMALGKGQKDDMSSSAIVKCWGYADITIGNLRITYQGYH-WRFKNSTMS--------SLSEIGVGIHG--------VIPSDGTGLTRMESYCR*DPRATFLNPFPVSLPVPPPPRNKPTCQFLVT----LGC*YLTSVKTTGR*TTAGIAMSAGSYWALYFSSETYDTTLYS*Y*DDSGRGRA*SPLQCSLSVPLKHLGFQAGAF*IIIFEE*HSREGE*RSS*NAVTLISTALSILNRQMYQAKLFENQNTRNEVRRYGSSQHYHHVAKR-NASETYNGAKMVHSTITEMLSHIVIATAIGTKAGLYKKVAAIPD-IGRQSTAIRRTFEMCTDCPARLLPFHVKPVPEPMCERVTSLPGNGQTGD---NELCPIWCMATKPTGQANTESGKVDVRVC 1458
N+DQI AEVV+ G DGTLTATY+S FPGNY +++E V DE A+ FW+PGT +SSN+ASA HGV R+GWVFQPK CV+DTFSY DLMLLAS+ EPTWLLVLG S+ERGV+LTL+DM L GQK + SS + KCWGYAD+ +GNLR+TYQ +RF ST S + +H V G T M + R P F V + + P + F V LG Y T T M+A ++F + D DD+G G K G+Q +R+ V+ +S MYQAKLFEN+ +RN +RR+ SQH+H+++K +A ET NG MVHSTITEML+++++ A+ TKA L+ K AA D I + S+ + ++F++C DCP LLPFHVKP+PEP+CE + SLPG + GD LCP WCM +P Q NT+S VDVR+C
Sbjct: 113 NEDQILTAEVVDGGRKDGTLTATYKSDFPGNYSVHIEEVQLSKKGEGVPILGSPFSLTIAGDAPTLNVNSLPVCSSDEDANTDIADTFWRPGTWLSSNVASAAHGVMRNGWVFQPKSCVFDTFSYEDLMLLASIGGEPTWLLVLGGSVERGVFLTLIDMVLAAGQKQGIRSSVLNKCWGYADVRVGNLRLTYQDMRLFRFTISTDSVACNNEKLTSESTSALVHSAGQFLASTVFQDGGQWPTMMMAASRLIPTRAEHTQFSVEVLMDAMPPSWEGKLFFVDHMAGLGN-YWTEENPT---------MTALKNVGIWFDRMSPD--------DDNGLG--------------KMDGYQ-------------TRDPR-------VSFMSVF------PMYQAKLFENEGSRNGIRRFAGSQHFHYISKETSAPETRNGTIMVHSTITEMLANVILGRAVETKASLHAKAAASKDEIQKLSSEVGKSFQVCWDCPGTLLPFHVKPIPEPVCEILESLPGGAKMGDVWSGSLCPDWCMKQEPVSQKNTQSDVVDVRMC 609
BLAST of mRNA_H-elongata_contig7097.14760.1 vs. uniprot
Match: D8LHZ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHZ4_ECTSI) HSP 1 Score: 322 bits (826), Expect = 5.420e-101 Identity = 208/560 (37.14%), Postives = 269/560 (48.04%), Query Frame = 1
Query: 1 NQDQIFIAEVVNNG--DGTLTATYESSFPGNYLIYVEAVI----DEGT------------------------------------AEAFWKPGTSVSSNIASAKHGVTRDGWVFQPKICVYDTFSYNDLMLLASVN-EPTWLLVLGSSIERGVYLTLVDMALGKGQKDDMSSSAIVKCWGYADITIGNLRITYQ---------------------GYH--WRFKNSTMSSLSEIGVGIHGVIPSDGTGLTRMESYCR*DPRATFLNPFPVSLPVPPPPRNKPTCQFLVTLGC*YLTSVKTTGR*TTAGIAMSAGSYWALYFSSETYDTTLYS*Y*DDSGRGRA*SPLQCSLSVPLKHLGFQAGAF*IIIFEE*HSREGE*RSS*NAVTLISTALSILNRQMYQAKLFENQNTRNE---VRRYGSSQHYHHVAK-RNASETYNGAKMVHSTITEMLSHIVIATAIGTKAGLYKKVAAIPD-IGRQSTAIRRTFEMCTDCPARLLPFHVKPVPEPMCERVTSLPGNGQTGD---NELCPIWCMATKPTGQANTESGKVDVRVC 1458
N+DQI IAEVV+ G +GTLTATY+S FPG+YL+Y++ V DEG A+ FW+ GT +SSN+ASA HGV R+GWVFQPK CV+DTFSY DLMLLAS++ EPTWLLVLG S++RGV+LTLVDM L GQK D+ SS I KCWGYAD+ +GN R+TYQ G+ W+ N TM+ L ++ + G P D GL +ME Y DPR +F++ FP MYQAKLFEN+ + N VRR+ +S H+H+V+ +A ET NG MVHSTITEML++++I A+ TKA LY K AA D I + S + ++F++C+DCP+ LLPFHVK +PE +CE V SLPG+ +TG+ LCP WCM P Q+ TESG V+VR C
Sbjct: 106 NKDQILIAEVVDGGSKNGTLTATYKSDFPGDYLVYIDEVESSKKDEGVPILGSPFSLTIAGDAPTLDINSLPVCSTHEDANKDIADTFWRSGTWLSSNVASAAHGVMRNGWVFQPKSCVFDTFSYEDLMLLASLDGEPTWLLVLGGSVQRGVFLTLVDMVLAAGQKHDIRSSVIQKCWGYADVRVGNFRLTYQVLMGALPPSWEGKLSFVDHMAGFEILWKEDNPTMTDLEDVRIWHLGSSPDDDNGLGKMEGYETRDPRVSFMSVFP-----------------------------------------------------------------------------------------------------------------------------------MYQAKLFENEESNNGINGVRRFAASHHFHYVSSDASAPETRNGTIMVHSTITEMLANVMIGRAVETKAKLYAKAAASTDEIRKMSAEVGKSFQVCSDCPSALLPFHVKAIPESVCEIVESLPGHAKTGEVWAGSLCPDWCMKQAPMSQSKTESGVVEVRRC 534
BLAST of mRNA_H-elongata_contig7097.14760.1 vs. uniprot
Match: D7FXE0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE0_ECTSI) HSP 1 Score: 316 bits (809), Expect = 2.530e-98 Identity = 207/544 (38.05%), Postives = 292/544 (53.68%), Query Frame = 1
Query: 4 QDQIFIAEVVNNG--DGTLTATYESSFPGNYLIYVEAVI-------------------------------------DEGT---AEAFWKPGTSVSSNIASAKHGVTRDGWVFQPKICVYDTFSYNDLMLLASVN-EPTWLLVLGSSIERGVYLTLVDMALGKGQKDDMSSSAIVKCWGYADITIGNLRITYQGYHWRFKNSTMSSLSEIGVGIHGVIPSDG---TGLTRMESYCR*DPRATFL----NPFPVSLPVPPPPRNKPTCQFLVTLGC*YLTSVKTTGR*TTAGIAMSAGSYWALYFSSETYDTTLYS*Y*DDSGRGRA*SPLQCSLSVPLKHL-GFQAGAF*IIIFEE*HSREGE*RSS*NAVTLISTALSILNRQMYQAKLFENQNTRNEVRRYGSSQHYHHVAKRNAS-ETYNGAKMVHSTITEMLSHIVIATAIGTKAGLYKKVAAIPDIGRQSTA-IRRTFEMCTDCPARLLPFHVKPVPEPMCERVTSLPGNGQTG---DNELCPIWCMATKPTGQANTESGKVDVRVCKTD 1467
+DQI IAEVV +G +GTLTATY+S FPG+YL++VE V D+G+ A+ FW+PGT +S+N+ASA HGV R GWVFQPK CV+DTFSY DLMLLAS + EPTWL+V+G S++RGV+LTLVDMAL GQKDDM++S + KCWGYAD+ +GNLR+TYQ L ++ V+ ++ +G T + D A+ + +P ++ P + ++ + + S+ + + AG + + L +GR +P V L+ + G+Q + V+ +S MYQAKLFEN+ +R +R YG+S HYH+++ + E +NG MVHST+TEML++I++ A+ TKA LY K AA Q A + ++F++C+DCP ++LP HVKP+PEP+CE V SLPGN +TG D ELCP WCM P Q T+SG VDVR C +
Sbjct: 52 KDQILIAEVVGDGSNNGTLTATYKSDFPGDYLVHVEEVQPSERGEGLPIVGSPFSLKIAGDFPTLDVHSLPVCGSQDDGSTDIADTFWRPGTWLSANVASAAHGVMRTGWVFQPKSCVFDTFSYQDLMLLASPDGEPTWLVVVGGSVQRGVFLTLVDMALAAGQKDDMATSVLEKCWGYADLRVGNLRLTYQDMR----------LYQVSGKTDSVVCNNEKLTSGSTSAFVHSAKDFLASTVFRDGTQWPATILAPSYLVPEKNVNHMIEV---LMDSLPPSWEGKLLFVDHMAG-FSIHWTQGNPTRAALKDVRITATGR----TPTD---DVALRKMDGYQ--------------------TQDPRVSFMSAF------PMYQAKLFENERSRQGIRHYGASIHYHYMSSTTSDPEAHNGTTMVHSTMTEMLANIMLGQAVETKAELYAKAAASTGGSEQERADVGKSFQVCSDCPRQMLPVHVKPIPEPVCEIVESLPGNAETGEVWDGELCPDWCMKQAPVSQKETQSGPVDVRECSIE 548
BLAST of mRNA_H-elongata_contig7097.14760.1 vs. uniprot
Match: D8LJ62_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ62_ECTSI) HSP 1 Score: 313 bits (801), Expect = 3.470e-96 Identity = 205/541 (37.89%), Postives = 283/541 (52.31%), Query Frame = 1
Query: 4 QDQIFIAEVVNNGDGTLTATYESSFPGNYLIYVEAVI-----------------------------------------DEGTAEAFWKPGTSVSSNIASAKHGVTRDGWVFQPKICVYDTFSYNDLMLLASVNEPTWLLVLGSSIERGVYLTLVDMALGKGQKDDMSSSAIVKCWGYADITIGNLRITYQGYHWRFKNSTMSSLSEIGVGIHGVIPSDGTG--LTRMESYCR*DPRATFLNPFPVSLPVPP---PPRNKPTCQFLVTLGC*YLTSVKTTGR*TTAGIAMSAGSYWALYFSSETYDTTLYS*Y*DDSGRGRA*SPLQCSLSVPLKHLGFQAGAF*IIIFEE*HSREGE*RSS*NAVTLISTALSILNRQMYQAKLFENQNTRNEVRRYGSSQHYHHVAKR-NASETYNGAKMVHSTITEMLSHIVIATAIGTKAGLYKKVAA----IPDIGRQSTAIRRTFEMCTDCPARLLPFHVKPVPEPMCERVTSLPGNGQTG---DNELCPIWCMATKPTGQANTESGKVDVRVCKT 1464
+D +F+A V NNG+GTLTA YESSFPG+YL++VE V +E A ++W+ G+ VSSNIA+ HGV RDGWVFQPK CVY+ FSY+DLMLLA ++EP WLL LG+SI RG++LT++DMAL +GQKD+ S+S + KCWG+ DI IGNLRI+YQ + T+SS+ + V + S T ++ E + + D P+P + P P Q V + ++ ++ R T + G + + T T SG P+ S + G + E R+ VT +S MYQ +LFEN+ +R R YG S HYH+V+ N+ E Y GAKMVHS +TEML++++I A+GTKA L ++ + + A RTFE+CTDCPA L+P HVKP P C+ V++LPGN G D+E CP WCMA +P QA+ +G VDVRVC+T
Sbjct: 129 EDNVFVAGVRNNGNGTLTAAYESSFPGDYLVHVEDVNLKVQDHFGRGRPIIGSPFSLTVSGDPAVDVDALPVCGGEGEEEDLASSYWRTGSWVSSNIAARNHGVLRDGWVFQPKTCVYEAFSYDDLMLLAGLDEPAWLLALGNSILRGIFLTILDMALAQGQKDEFSTSVVKKCWGFIDIRIGNLRISYQD----LRLYTVSSVDDATVCNDEKLASGSTAAYVSSAELFLQ-DTIFRENKPWPSVIWAPSNMIDSDEAPNLQISV-----LMDALPSSWRGTLVMLDQLYGYGYGWNTGNPTLATL--------SGV----KPVN-EFSPATRDSGLER-------MERYRQRDPR-------VTFMSAF------PMYQGRLFENEESRIGERCYGCSIHYHYVSDDPNSPEAYGGAKMVHSAVTEMLANVLITRAVGTKAALRERAGTHSSDVTSTAEERQADTRTFELCTDCPATLIPLHVKPSPLLKCDTVSALPGNATVGKAWDDERCPDWCMAREPDRQASKGTGLVDVRVCET 626
BLAST of mRNA_H-elongata_contig7097.14760.1 vs. uniprot
Match: A0A6H5K539_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K539_9PHAE) HSP 1 Score: 308 bits (790), Expect = 5.280e-96 Identity = 196/557 (35.19%), Postives = 260/557 (46.68%), Query Frame = 1
Query: 4 QDQIFIAEVVNNG--DGTLTATYESSFPGNYLIYVEAVI----DEGTA------------------------------------EAFWKPGTSVSSNIASAKHGVTRDGWVFQPKICVYDTFSYNDLMLLASVN-EPTWLLVLGSSIERGVYLTLVDMALGKGQKDDMSSSAIVKCWGYADITIGNLRITYQ-----------------------GYHWRFKNSTMSSLSEIGVGIHGVIPSDGTGLTRMESYCR*DPRATFLNPFPVSLPVPPPPRNKPTCQFLVTLGC*YLTSVKTTGR*TTAGIAMSAGSYWALYFSSETYDTTLYS*Y*DDSGRGRA*SPLQCSLSVPLKHLGFQAGAF*IIIFEE*HSREGE*RSS*NAVTLISTALSILNRQMYQAKLFENQNTRNEVRRYGSSQHYHHVAK-RNASETYNGAKMVHSTITEMLSHIVIATAIGTKAGLYKKVAAIPD-IGRQSTAIRRTFEMCTDCPARLLPFHVKPVPEPMCERVTSLPGNGQTGD---NELCPIWCMATKPTGQANTESGKVDVRVCK 1461
QD+I IAEV + G +GTLTATY+S FPG+YL+Y++ V DEG + FW+ GT +SSN+ASA HGV R+GWVFQPK CV+DTFSY DLMLLAS++ EPTWLLVLG S++RGV+LTL+DM L GQK D+ SS + KCWGYAD+ +GNLR+TYQ G W +N TM++L ++ + P D GL +M++Y DPR MYQAKLFEN+ ++N +RR+ SQH+H+V+ + ET NG MVHSTITEML++++I A+ TKA LY K AA D I + + + F++C+DCP+ LLPFHVK +PE +CE V SLPG+ +TG+ LCP WCM P Q+ T+SG V+VR C+
Sbjct: 90 QDEILIAEVADGGSKNGTLTATYKSDFPGDYLVYIDEVESSKKDEGVPILGSPFSLTIAGDAPTLDVNSLPVCSTHEDTNKDIPDTFWRSGTWLSSNVASAAHGVMRNGWVFQPKSCVFDTFSYEDLMLLASLDGEPTWLLVLGGSVQRGVFLTLIDMVLAAGQKHDIQSSVVQKCWGYADVRVGNLRLTYQVLMDALPPSWEGKLSFVDHMAGFGIMWEEENPTMTALEDVRMWYLSSSPDDDNGLGKMDAYETRDPR-------------------------------------------------------------------------------------------------------------------------------------------MYQAKLFENEQSKNGIRRFAVSQHFHYVSSDASGPETRNGTIMVHSTITEMLANVMIGRAVETKAKLYAKAAASTDEIRKMNAEFGKAFQVCSDCPSALLPFHVKAIPESVCEIVQSLPGDAKTGEAWPGSLCPDWCMKQAPVSQSTTQSGVVEVRWCR 507
BLAST of mRNA_H-elongata_contig7097.14760.1 vs. uniprot
Match: A0A6H5JGW9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGW9_9PHAE) HSP 1 Score: 299 bits (766), Expect = 6.170e-92 Identity = 209/578 (36.16%), Postives = 296/578 (51.21%), Query Frame = 1
Query: 10 QIFIAEVVNNG--DGTLTATYESSFPGNYLIYVEAVI----DEGT------------------------------------AEAFWKPGTSVSSNIASAKHGVTRDGWVFQPKICVYDTFSYNDLMLLASVN-EPTWLLVLGSSIERGVYLTLVDMALGKGQKDDMSSSAIVKCWGYADITIGNLRITYQGYHWRFKNSTMSSLSEIGVGIHGVIPS-DGTGLTRMESYCR*DPRATFLNPFPVSLPVPPPPRNKPTCQFLVTLGC*YLTSVKTTGR*TTAGIAMSAGSYWALYFSSETY-DTTLYS*Y*DDSGRGRA*SPLQCSLSVPLKHLGFQAGAF*IIIFEE*HSREGE*RSS*NAVTLISTALSILNRQ---------------------------MYQAKLFENQNTRNEVRRYGSSQHYHHVAK-RNASETYNGAKMVHSTITEMLSHIVIATAIGTKAGLYKKVAAIPD-IGRQSTAIRRTFE-----------------MCTDCPARLLPFHVKPVPEPMCERVTSLPGNGQTGD---NELCPIWCMATKPTGQANTESGKVDVRVCK 1461
QI IAEV ++G +GTLTATY+S FPG+YL+Y++ V DEG A+ FW+ GT +SS++ASA HGV R+GWVFQPK CV+DTFSY DLMLLAS++ EPTWLLVLG S++RGV+LTL+DM L GQK+D+ SS + KCWGYAD+ +GNLR+TYQ ++++ G+G I + + R + R + F N ++ + F G SV + + +GS A S+E + +T++ G + S +P + G Q ++ EE + L +S L+R MYQAKLFEN+ ++N +RR+ SQH+H+V+ + ET NG MVHSTITEML++++I A+ TKA LY K AA D I + + + ++F+ +C+DCP+ LLPFHVK +PE +CE V SLPG+ +TG+ +LCP WCM P Q+ TESG V+VR C+
Sbjct: 13 QILIAEVADDGSKNGTLTATYKSDFPGDYLVYIDEVESSKKDEGVPILGSPFSLTIAGDAPTLDVNSLPVCSTHDDANKNIADTFWRSGTWLSSSVASAAHGVMRNGWVFQPKSCVFDTFSYEDLMLLASLDGEPTWLLVLGGSVQRGVFLTLIDMVLAAGQKNDIQSSVVQKCWGYADVRVGNLRLTYQ-----------EAVTD-GLGRELAISALEWRQFHRELCWLR---QLLFHNEAETNIML----------LFFTNAG--LSNSVDSL---VCNNEKLMSGSTAAFIHSAEQFLASTIFR-----EGGPWPTVVMAPSNLIPSNNEGTQFSVEEVLWKEE----------NPTMTALEDVRMSYLSRSPDDDNGLGKMDGYETRDPRVSFMSVFPMYQAKLFENEQSKNGIRRFAVSQHFHYVSSDASGPETRNGTIMVHSTITEMLANVMIGRAVETKAKLYAKAAASTDEIRKMNAEVGKSFQAKAGTRRNGQFQREFVTVCSDCPSSLLPFHVKAIPESVCEIVESLPGHAKTGEAWPGDLCPDWCMKQAPVSQSKTESGVVEVRRCR 545
BLAST of mRNA_H-elongata_contig7097.14760.1 vs. uniprot
Match: A0A6H5K8P1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8P1_9PHAE) HSP 1 Score: 281 bits (719), Expect = 3.990e-84 Identity = 214/625 (34.24%), Postives = 295/625 (47.20%), Query Frame = 1
Query: 4 QDQIFIAEVVNNG--DGTLTATYESSFPGNYLIYVEAVI-------------------------------------DEGT---AEAFWKPGTSVSSNIASAKHGVTRDGWVFQPKICVYDTFSYNDLMLLASVN-EPTWLLVLGSSIERGVYLTLVDMALGKGQKDDMSSSAIVKCWGYADITIGNLRITYQG---YHWRFK-NSTMSSLSEIGVGIHGVIPSDGTGLTRMESYCR*DPR--ATFLNPFPVSLPVPPPPRNKPTCQFLVTLGC*Y----LTSVKTTGR*TTAGIAMSAGSYWALYFSSETYDTTLYS*Y*DDSGRGRA*SPLQCSLSVPLKHL-GFQAGAF*IIIFEE*HSREGE*RSS*NAVTLISTALSILNRQMYQAKLFENQNTRNEVRRYGSSQHYHHVAKRNAS-ETYNGAKMVHSTITEML------------------------------------------------------------------------------SHIVIATAIGTKAGLYKKVAAIPDIG-RQSTAIRRTFEMCTDCPARLLPFHVKPVPEPMCERVTSLPGNGQTG---DNELCPIWCMATKPTGQANTESGKVDVRVCKTD 1467
+DQI IAEVV +G +GTLTATY+S FPG+YL++VE V D+G+ A+ FW+PGT +SSN+ASA HGV R+GWVFQPK CV+DTFSY DLMLLAS++ EPTWL+V+G S++RGV+LTLVDMAL GQKDDM++S + KCWGYAD+ +GNLR+TYQ Y K +S + + ++ G ++ R + AT L P S VP N+ ++ C + + S+ + + AG + + T L +GR +P L+ + G+Q + R S + +S A + LFEN+ +R +R YG+S HYH+V+ + E +NG MVHST+TEML S I+I A+ TKA L+ K AA + +QS + ++F++C+DCP +LLP HVKP+PEP+CE V SLPGN +TG D ELCP WCM P Q T+SG VDVR C +
Sbjct: 37 KDQILIAEVVGDGSNNGTLTATYQSDFPGDYLVHVEEVQPSKRGEGLPIVGSPFSLTITGDGPTLDVDSLPVCGSQDDGSNDIADTFWRPGTWLSSNVASAAHGVMRNGWVFQPKSCVFDTFSYQDLMLLASLDGEPTWLVVVGGSVQRGVFLTLVDMALAAGQKDDMATSVLQKCWGYADLRVGNLRLTYQDMRLYQVSGKTDSVVCNNEKLTSGSTAAFVHSAKEFLASTAF-RDGTQWPATILAP---SYLVPENNVNQMIEAYIRPASCAHAQVLMDSLPPSWEGKLLFVDHMAG-FRIHWTQGNPTRTALMDVRITATGR----TPTD---DFALRKMDGYQTQ---------------DPRVSFISAFPVSFA---------ERNLFENERSRQGIRHYGASIHYHYVSSTTSDPEAHNGTTMVHSTMTEMLANVSRRRVLTGTKAVSPRHFFVVSGFRDQQRKAGIEGEMLLVSKRTCWDRLQCPCTAEPKPPDAPFVFCRATFLYKSYSQIMIGRAVETKAELHAKAAASTEGSEQQSVDVGKSFQVCSDCPRQLLPAHVKPIPEPVCETVESLPGNAETGEVWDGELCPDWCMKQAPVSQKETQSGPVDVRECSME 625
BLAST of mRNA_H-elongata_contig7097.14760.1 vs. uniprot
Match: D7FLN2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLN2_ECTSI) HSP 1 Score: 218 bits (556), Expect = 5.880e-62 Identity = 170/537 (31.66%), Postives = 237/537 (44.13%), Query Frame = 1
Query: 7 DQIFIAEVVNNGDGTLTATYESSFPGNYLIYVE---------------------AVID---------------------------EGTAEAFWKPGTSVSSNIASAKHGVTRDGWVFQPKICVYDTFSYNDLMLLASVN-EPTWLLVLGSSIERGVYLTLVDMALGKGQKDDMSSSAIVKCWGYADITIGNLRITYQGYHWRFKNSTMSSLSEIGVGIHGVIPSDGTGLTRMESYCR*DPRATFLNPFPVSLPVPPPPRNKPTCQFLVTLGC*YLTSVKTTGR*TTAGIAMSAGSYWALYFSSETYDTTLYS*Y*DDSGRGRA*SPLQCSL-SVPLKHLGFQAGAF*IIIFEE*HSREGE*RSS*NAVTLISTALSILNRQMYQAKLFENQNTRNEVRRYGSSQHYHHVAKRNASETYNGAKMVHSTITEMLSHIVIATAIGTKAGLYKKVAAIPDIGRQSTAIRRTFEMCTDCPARLLPFHVKPVPEPMCERVTSLPGNGQTGD---NELCPIWCMATKPTGQANTESGKVDVRVC 1458
D + A VV+NGDGTLTATYES +PG+YL++V+ A++D E + FW+ G+ +SS ASAKHGV RDGWVFQPK CV+DTFSY+DLMLLA+ + EPTWLL+LG+S++RGV+LTLVDM L +GQK D ++SAI KCWG+A++ +GNLR+TYQ +H V GL + +S D + N F+ SV +AG W + + +DS A P+ + ++P G ++ E + G + N + L+ +N + +K N ++RY A+ T+ IVI+ A+G+KA LY+K A P FE+CTDCPA L+P HVKPVP P+C + L G+ G+ CP WC G N + DVRVC
Sbjct: 15 DHVLHAAVVDNGDGTLTATYESPYPGDYLVHVQDVCTDMSVVGRGKKRPGERAKAIVDSPFRLTISGEIAVDVDDLPLCDAEHPQEDEEDTFWRTGSWISSKFASAKHGVLRDGWVFQPKTCVHDTFSYDDLMLLATGSKEPTWLLILGTSVQRGVFLTLVDMVLAQGQKSDFATSAIQKCWGFAEVRVGNLRLTYQDLR-----------------LHEV------GLAQDDSAVCHDDKLAINN----------------VAVFVAAARRFLRRSV------------FAAGKQWPSVIMAPPFM--------EDSDEA-ANLPITVIMDALPSAWNG-------TLLMMEHMAGLG---FTYNYDNPTAATLAEVNPTWHLSKFIGVDNGLGRIKRYQQQD-----ARTKFMSTFP---------------IVISKAVGSKAALYEK--ATPSTNTHRGGGNEIFEVCTDCPASLIPHHVKPVPVPVCNATSVLAGDAAVGEAWGGRGCPQWCSKEPVDGVLNLK----DVRVC 455 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7097.14760.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig7097.14760.1 >prot_H-elongata_contig7097.14760.1 ID=prot_H-elongata_contig7097.14760.1|Name=mRNA_H-elongata_contig7097.14760.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=161bp MYQAKLFENQNTRNEVRRYGSSQHYHHVAKRNASETYNGAKMVHSTITEMback to top mRNA from alignment at H-elongata_contig7097:579..4859+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig7097.14760.1 ID=mRNA_H-elongata_contig7097.14760.1|Name=mRNA_H-elongata_contig7097.14760.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4281bp|location=Sequence derived from alignment at H-elongata_contig7097:579..4859+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig7097:579..4859+ >mRNA_H-elongata_contig7097.14760.1 ID=mRNA_H-elongata_contig7097.14760.1|Name=mRNA_H-elongata_contig7097.14760.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=966bp|location=Sequence derived from alignment at H-elongata_contig7097:579..4859+ (Himanthalia elongata Himel1 dioecious)back to top |