mRNA_H-elongata_contig70814.14742.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig70814.14742.1 vs. uniprot
Match: A0A6H5KAN7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAN7_9PHAE) HSP 1 Score: 357 bits (915), Expect = 5.090e-118 Identity = 202/282 (71.63%), Postives = 233/282 (82.62%), Query Frame = 2
Query: 2 LNSVTMWALGVNGSAKTCENPAMEKLMKRLAAVVGVYSHSAVNNDELKSIQQLQEEFHKIYELIRRNDTRWTTQHDMMVRLLQLKKAIMEYFRKHESNNRKLTAREWTVTNEVCSLLDVVAEVRIKIQGAVNTHISQIMFNMREIKNIFAEEEFSIRVPDQLYRGGNVQKERMTLEDLSMKAVDVRNTILSRLDKKGLGKANMALERICALLDPRRKESSKDHPINGSPALHIAAIEDVKMVAKTFVEATAGSASSXXXXXXXXXXXXXGEPTQPEPKRQKV 847
LNSVTMWALG+NGS +T ENPAMEKLMKRLAAVVGV+SHSAVNNDELK IQ+LQEEF IYELIRRNDTRW +QH MMVRLL+LKKAI+EYFR +E+NNRKL++REWTVTNEVCSLLDVVAEV +KIQGA +THISQ MFNMREI+ IF+ + + IRVPDQ Y +V KE++ ++DL + VR +LSR++KK LG A M LERICALLDPRRK+ S +H +NGS L +AI DVK VAKTF EA GSASSXXXXXXXXXXXXX QP PK+QKV
Sbjct: 52 LNSVTMWALGINGSIRTGENPAMEKLMKRLAAVVGVFSHSAVNNDELKDIQRLQEEFQIIYELIRRNDTRWASQHAMMVRLLKLKKAIVEYFRDNENNNRKLSSREWTVTNEVCSLLDVVAEVTVKIQGATDTHISQTMFNMREIREIFSGDVYKIRVPDQPYNDDSVLKEKIQVDDLMTETCKVREVVLSRMEKKELGAARMPLERICALLDPRRKDCSDEHLVNGSADLKASAIADVKSVAKTFAEADLGSASSXXXXXXXXXXXXXN---QPAPKKQKV 330
BLAST of mRNA_H-elongata_contig70814.14742.1 vs. uniprot
Match: A0A6H5KJ52_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ52_9PHAE) HSP 1 Score: 357 bits (915), Expect = 3.280e-114 Identity = 202/282 (71.63%), Postives = 233/282 (82.62%), Query Frame = 2
Query: 2 LNSVTMWALGVNGSAKTCENPAMEKLMKRLAAVVGVYSHSAVNNDELKSIQQLQEEFHKIYELIRRNDTRWTTQHDMMVRLLQLKKAIMEYFRKHESNNRKLTAREWTVTNEVCSLLDVVAEVRIKIQGAVNTHISQIMFNMREIKNIFAEEEFSIRVPDQLYRGGNVQKERMTLEDLSMKAVDVRNTILSRLDKKGLGKANMALERICALLDPRRKESSKDHPINGSPALHIAAIEDVKMVAKTFVEATAGSASSXXXXXXXXXXXXXGEPTQPEPKRQKV 847
LNSVTMWALG+NGS +T ENPAMEKLMKRLAAVVGV+SHSAVNNDELK IQ+LQEEF IYELIRRNDTRW +QH MMVRLL+LKKAI+EYFR +E+NNRKL++REWTVTNEVCSLLDVVAEV +KIQGA +THISQ MFNMREI+ IF+ + + IRVPDQ Y +V KE++ ++DL + VR +LSR++KK LG A M LERICALLDPRRK+ S +H +NGS L +AI DVK VAKTF EA GSASSXXXXXXXXXXXXX QP PK+QKV
Sbjct: 380 LNSVTMWALGINGSIRTGENPAMEKLMKRLAAVVGVFSHSAVNNDELKDIQRLQEEFQIIYELIRRNDTRWASQHAMMVRLLKLKKAIVEYFRDNENNNRKLSSREWTVTNEVCSLLDVVAEVTVKIQGATDTHISQTMFNMREIREIFSGDVYKIRVPDQPYNDDSVLKEKIQVDDLMTETCKVREVVLSRMEKKELGAARMPLERICALLDPRRKDCSDEHLVNGSADLKASAIADVKSVAKTFAEADLGSASSXXXXXXXXXXXXXN---QPAPKKQKV 658
BLAST of mRNA_H-elongata_contig70814.14742.1 vs. uniprot
Match: A0A6H5JGG8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGG8_9PHAE) HSP 1 Score: 228 bits (581), Expect = 2.440e-65 Identity = 128/285 (44.91%), Postives = 179/285 (62.81%), Query Frame = 2
Query: 2 LNSVTMWALGVNGSAKTCENPAMEKLMKRLAAVVGVYSHSAVNNDELKSIQQLQEEFHKIYELIRRNDTRWTTQHDMMVRLLQLKKAIMEYFRKHESNNRKLTAREWTVTNEVCSLLDVVAEVRIKIQGAVNTHISQIMFNMREIKNIFAEEEFSIRVPDQLYRG---GNVQKERMTLEDLSMKAVDVRNTILSRLDKKGLGKANMALERICALLDPRRKESSKDHPINGSPALHIAAIEDVKMVAKTFVEATAGSASSXXXXXXXXXXXXXGEPTQPEPKRQKV 847
LN+ +WALG+ G + NPAM LMK+LAA+VGV+SHSAVNNDELK +Q+L+E F +IYEL+RRNDTRWT+Q MM R+L LKK I EYF+K+ N RKLT EWT+TNEVCSLL V+EV I++QG+V+TH+ Q MF + E+ + E+ IR P+ + + + DL+ +A V + ++ +KG+G A +A+ER+ AL+DPRRK D NGS L A +D+K V F A +A + +P +P PK++K+
Sbjct: 392 LNTAVVWALGIAGKGRL--NPAMGTLMKKLAAMVGVFSHSAVNNDELKELQRLEEGFSRIYELLRRNDTRWTSQFKMMDRVLALKKPISEYFKKYPQNERKLTPNEWTITNEVCSLLSDVSEVTIRMQGSVDTHVGQAMFILHELIEMLGEDTHPIRQPNATVMPLPPEGIPTDDTQVMDLTAEAQCVLEVLQEKMREKGMGSAQVAVERLSALMDPRRKSLDSDQLENGSADLRKKAEDDLKAVIAKFDVGPATAAPAPAPVMNL-------DPVEPAPKKKKL 667
BLAST of mRNA_H-elongata_contig70814.14742.1 vs. uniprot
Match: A0A6H5KAS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAS2_9PHAE) HSP 1 Score: 215 bits (547), Expect = 1.460e-63 Identity = 135/286 (47.20%), Postives = 183/286 (63.99%), Query Frame = 2
Query: 2 LNSVTMWALGVNGSAKTCENPAMEKLMKRLAAVVGVYSHSAVNNDELKSIQQLQEEFHKIYELIRRNDTRW-TTQHDMMVRLLQLKKAIMEYFRKHESNNRKLTAREWTVTNEVCSLLDVVAEVRIKIQGAVNTHISQIMFNMREIKNIFAEEEFSIRVPDQLY---RGGNVQKERMTLEDLSMKAVDVRNTILSRLDKKGLGKANMALERICALLDPRRKESSKDHPINGSPALHIAAIEDVKMVAKTFVEATAGSASSXXXXXXXXXXXXXGEPTQPEPKRQKV 847
+N+ +WALG+ +AK +NP M LMK+LAA+VGV+SHSAVNNDELK +Q+L+E F +IYEL+RRNDTRW T+Q MM R L LKK I E+F+K+ N+RKLT EWT+ NEVCSLL V+E+ I++QG+V+THI Q MF + E+ + E+ IR P+ + + + DL+ +A V +L + KKG+G A +A ER+ AL+DPRRK D NGS L A +D+K V F G ++ XXXXXXXX P +P PKR+ V
Sbjct: 41 VNTAVVWALGI--AAKGRKNPTMGTLMKKLAAMVGVFSHSAVNNDELKELQRLEEGFSRIYELLRRNDTRWWTSQLKMMDRALALKKPISEFFKKYPQNDRKLTPNEWTIINEVCSLLADVSEITIRVQGSVDTHIGQAMFIIHEVIEMLGEDTHPIRQPNATVVPVPEEGIPTDDTPVTDLTAEAPCVLEVLLDVMRKKGVGSAQVAAERLSALMDPRRKLLGSDQLENGSADLSKKAEDDLKAVIAKF---DVGPSTESTAAPXXXXXXXXXXPAEPAPKRKTV 321
BLAST of mRNA_H-elongata_contig70814.14742.1 vs. uniprot
Match: A0A6H5JTB8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTB8_9PHAE) HSP 1 Score: 218 bits (554), Expect = 1.160e-62 Identity = 124/285 (43.51%), Postives = 176/285 (61.75%), Query Frame = 2
Query: 2 LNSVTMWALGVNGSAKTCENPAMEKLMKRLAAVVGVYSHSAVNNDELKSIQQLQEEFHKIYELIRRNDTRWTTQHDMMVRLLQLKKAIMEYFRKHESNNRKLTAREWTVTNEVCSLLDVVAEVRIKIQGAVNTHISQIMFNMREIKNIFAEEEFSIRVPDQLYRG---GNVQKERMTLEDLSMKAVDVRNTILSRLDKKGLGKANMALERICALLDPRRKESSKDHPINGSPALHIAAIEDVKMVAKTFVEATAGSASSXXXXXXXXXXXXXGEPTQPEPKRQKV 847
LN+ +WALG+ G + NPAM LMK+LAA+VGV+SHSAVNNDELK +Q+L+E F +IYEL+R NDTRWT+Q MM R+L LKK I EYF+K+ N RKLT EWT+TNEVCSLL V+EV I++QG+V+TH+ Q MF + E+ + E+ IR P+ + + + DL+ +A V + ++ +KG+G A +A+ER+ AL+DPR + D NGS L A +D+K V F A +A + + +P PK++K+
Sbjct: 197 LNTAVVWALGIAGKGRL--NPAMGTLMKKLAAMVGVFSHSAVNNDELKELQRLEEGFSRIYELLRPNDTRWTSQFKMMDRVLALKKPISEYFKKYPQNERKLTPNEWTITNEVCSLLSDVSEVTIRMQGSVDTHVGQAMFILHELIEMLGEDTHPIRQPNATVMPLPPEGIPTDDTQVMDLTAEAQCVLEVLQEKMREKGVGSAQVAVERLSALMDPRLRSLDSDQLENGSADLRKKAEDDLKAVIAKFDVGPATAAPAPAPVMNL-------DRVEPAPKKKKL 472
BLAST of mRNA_H-elongata_contig70814.14742.1 vs. uniprot
Match: A0A6H5JRT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRT6_9PHAE) HSP 1 Score: 216 bits (551), Expect = 3.900e-61 Identity = 120/246 (48.78%), Postives = 161/246 (65.45%), Query Frame = 2
Query: 2 LNSVTMWALGVNGSAKTCENPAMEKLMKRLAAVVGVYSHSAVNNDELKSIQQLQEEFHKIYELIRRNDTRWTTQHDMMVRLLQLKKAIMEYFRKHESNNRKLTAREWTVTNEVCSLLDVVAEVRIKIQGAVNTHISQIMFNMREIKNIFAEEEFSIRVPDQLYRGGNVQKERMTLEDLSMKAVDVRNTILSRLDKKGLGKANMALERICALLDPRRKESSKDHPINGSPALHIAAIEDVKMVAKTF 739
+N+ +WALG+ G+ + N M LMK+LAA+VGV+SHSAVNND+LK +Q+L+E+ H +Y+LIRRNDTRWT+Q MM RLL LKK I EYFR+ N+RKLT EWT+TNEVCSLL V+EV I++QGA +THISQ MF + E+ + E+ IR + + E M + +LS A V +L +++K +GKA +ER+ AL+DPRRK NGS L A ED+K V F
Sbjct: 390 VNTAVLWALGIAGNGR--RNKVMGDLMKKLAALVGVFSHSAVNNDKLKELQRLEEDLHAVYQLIRRNDTRWTSQFKMMDRLLALKKPITEYFREQPHNSRKLTQPEWTITNEVCSLLSDVSEVTIRMQGAKDTHISQAMFIIHEVMEMLREDSHPIRAQNA------TEPEEMQVLELSSAAQGVLEVLLDVMEEKQVGKAVQQVERLSALMDPRRKSLDGAKLENGSATLRKKAEEDLKAVIAQF 627
BLAST of mRNA_H-elongata_contig70814.14742.1 vs. uniprot
Match: A0A6H5JZU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZU3_9PHAE) HSP 1 Score: 212 bits (540), Expect = 1.100e-60 Identity = 127/280 (45.36%), Postives = 167/280 (59.64%), Query Frame = 2
Query: 2 LNSVTMWALGVNGSAKTCENPAMEKLMKRLAAVVGVYSHSAVNNDELKSIQQLQEEFHKIYELIRRNDTRWTTQHDMMVRLLQLKKAIMEYFRKHESNN-------RKLTAREWTVTNEVCSLLDVVAEVRIKIQGAVNTHISQIMFNMREIKNIFAEEEFSIRVPDQLY--------------RGGN------VQKERMTLEDLSMKAVDVRNTILSRLDKKGLGKANMALERICALLDPRRKESSKDHPINGSPALHIAAIEDVKMVAKTFVEATAGS 760
+NS +WALG+ GS TC+N K MK+LAA+VGV+SHSAVNND LK +Q+L+ + H+IYE IRRNDTRWT+Q MM RLL LKK I EYFR+ N RKLTA EWTVTNEVCSLL+ V+EV I++QGA +TH+SQ F + E+ ++ + IRV + G N + + DL+++A DV +L +D+KG+GKA +ER+ LLDPRRK H NGS L A D+K F + +A S
Sbjct: 201 VNSAVLWALGIAGSVTTCKN----KPMKKLAALVGVFSHSAVNNDMLKELQRLEADLHRIYETIRRNDTRWTSQQKMMGRLLILKKPISEYFRRLAQQNSQNKQLKRKLTAHEWTVTNEVCSLLETVSEVTIRMQGATDTHLSQATFIINEVIDMLTTDYHPIRVESAIVTPPPPAAGIIPTEGEGQNESSLDGISTAETQVTDLTLEAQDVVQVLLEVMDEKGVGKALQWVERLSVLLDPRRKTLDDTHLRNGSSDLKTQAEADLKAFIGKFAQESAPS 476
BLAST of mRNA_H-elongata_contig70814.14742.1 vs. uniprot
Match: A0A6H5JQI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQI6_9PHAE) HSP 1 Score: 211 bits (536), Expect = 4.470e-60 Identity = 124/260 (47.69%), Postives = 161/260 (61.92%), Query Frame = 2
Query: 2 LNSVTMWALGVNGSAKTCENPAMEKLMKRLAAVVGVYSHSAVNNDELKSIQQLQEEFHKIYELIRRNDTRWTTQHDMMVRLLQLKKAIMEYFRKHESNN-------RKLTAREWTVTNEVCSLLDVVAEVRIKIQGAVNTHISQIMFNMREIKNIFAEEEFSIRVPDQLYRGGNVQKERMTLEDLSMKAVDVRNTILSRLDKKGLGKANMALERICALLDPRRKESSKDHPINGSPALHIAAIEDVKMVAKTFVEATAGS 760
+NS +WALG+ GSA TC+N K MK+LAA+VGV+SHSAVNND LK +Q+L+ + H+IYE IRRNDTRWT+Q MM RLL LKK I EYFR+ N RKLTA EWTVTNEVCSLL+ V+EV I++QGA TH+SQ F + E + + E S+ + E + L+++A DV + +D+KG+GKA +ER+ LLDPRRK H NGS L A D+K F + +A S
Sbjct: 201 VNSAVLWALGIAGSATTCKN----KPMKKLAALVGVFSHSAVNNDMLKELQRLEADLHRIYETIRRNDTRWTSQQKMMGRLLILKKPISEYFRRLAQQNSQNKQLKRKLTAHEWTVTNEVCSLLETVSEVTIRMQGATETHLSQATFIINEGEG---QNESSL---------DGISTEETQVTGLTLEAQDVVQVLREMMDEKGVGKALQRVERLSVLLDPRRKTLDDTHLRNGSSDLKTQAEADLKAFTGKFAQESAPS 444
BLAST of mRNA_H-elongata_contig70814.14742.1 vs. uniprot
Match: A0A6H5KZZ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZZ1_9PHAE) HSP 1 Score: 195 bits (495), Expect = 1.710e-57 Identity = 117/268 (43.66%), Postives = 161/268 (60.07%), Query Frame = 2
Query: 68 MEKLMKRLAAVVGVYSHSAVNNDELKSIQQLQEEFHKIYELIRRNDTRWTTQHDMMVRLLQLKKAIMEYFRKHESNNRKLTAREWTVTNEVCSLLDVVAEVRIKIQGAVNTHISQIMFNMREIKNIFAEEEFSIRVPDQLY---RGGNVQKERMTLEDLSMKAVDVRNTILSRLDKKGLGKANMALERICALLDPRRKESSKDHPINGSPALHIAAIEDVKMVAKTF-----VEATAGSASSXXXXXXXXXXXXXGEPTQPEPKRQKV 847
M LMK+LAA+VGV++HSAVNNDELK +Q+L+E F +IYEL+RRNDTRWT+Q MM R L LKK I EYF+K+ N RKLT EWT+ NEVCSLL V+EV I++QG+V+THI Q MF + E+ + E+ IR P+ + + + DL+ +A V +L + +KG+G A +A+E + AL+DP K D NGS L A +D+K V F E+T A + +P +P PK++KV
Sbjct: 1 MGTLMKKLAAMVGVFNHSAVNNDELKELQRLEEGFSRIYELLRRNDTRWTSQFKMMDRCLALKKPISEYFKKYLQNERKLTPNEWTMINEVCSLLSNVSEVTIRMQGSVDTHIGQAMFIIHELIEMLGEDTHPIRQPNATVVPVPPEGIPTDGTQVTDLTAEAQCVLEVLLDVMREKGVGSAQVAVESLSALMDPSGKLLDSDQLENGSADLRNKAEDDLKAVIAKFDVGPSTESTVAPAPAPVVNT---------DPAEPAPKKKKV 259
BLAST of mRNA_H-elongata_contig70814.14742.1 vs. uniprot
Match: A0A6H5KDJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDJ6_9PHAE) HSP 1 Score: 201 bits (511), Expect = 2.300e-57 Identity = 123/271 (45.39%), Postives = 165/271 (60.89%), Query Frame = 2
Query: 2 LNSVTMWALGVNGSAKTCENPAMEKLMKRLAAVVGVYSHSAVNNDELKSIQQLQEEFHKIYELIRRNDTRWTTQHDMMVRLLQLKKAIMEYFRK------HESNNRKLTAREWTVTNEVCSLLDVVAEVRIKIQGAVNTHISQIMFNMREIKNIFAEEEFSIRVPDQLY-------------------RGGNVQKERMTLEDLSMKAVDVRNTILSRLDKKGLGKANMALERICALLDPRRKESSKDHPINGSPALHIAAIEDVKMVAKTF 739
+NS +WALG+ GSA TC N M LMK+LAA+VGV+S SAVNN LK +Q+L+ + H+IYEL+RRNDT +Q MM RLL LKK I EYFR+ ++ RKL++ EW VTNEVCSLL V+E+ I+IQGA +THISQ MF + E+ + +E IR + + + G V E + +EDL+ +A VR +L +++KG+GKA +ER+ ALLDPRRK+ NG L IAA D+K TF
Sbjct: 56 INSAVVWALGIAGSATTCRNTKMGGLMKKLAALVGVFSPSAVNN-MLKELQRLETDLHRIYELMRRNDT---SQFKMMGRLLTLKKPISEYFRRLPQIPSNKQLKRKLSSHEWIVTNEVCSLLGDVSEITIRIQGAQDTHISQAMFLIHEVMEMLKDETHPIRTANAIVTPPPPALDVIPTEEEENQPQKGGVSTEDIHVEDLTTEAQGVRKVLLEVMEEKGVGKALQRVERLSALLDPRRKDLDATQVGNGDEDLRIAAEADLKKFIATF 322 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig70814.14742.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig70814.14742.1 >prot_H-elongata_contig70814.14742.1 ID=prot_H-elongata_contig70814.14742.1|Name=mRNA_H-elongata_contig70814.14742.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=277bp MWALGVNGSAKTCENPAMEKLMKRLAAVVGVYSHSAVNNDELKSIQQLQEback to top mRNA from alignment at H-elongata_contig70814:95..1299+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig70814.14742.1 ID=mRNA_H-elongata_contig70814.14742.1|Name=mRNA_H-elongata_contig70814.14742.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1205bp|location=Sequence derived from alignment at H-elongata_contig70814:95..1299+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig70814:95..1299+ >mRNA_H-elongata_contig70814.14742.1 ID=mRNA_H-elongata_contig70814.14742.1|Name=mRNA_H-elongata_contig70814.14742.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1662bp|location=Sequence derived from alignment at H-elongata_contig70814:95..1299+ (Himanthalia elongata Himel1 dioecious)back to top |