mRNA_H-elongata_contig70660.14729.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig70660.14729.1
Unique NamemRNA_H-elongata_contig70660.14729.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig70660.14729.1 vs. uniprot
Match: D7FPY1_ECTSI (FACT complex subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPY1_ECTSI)

HSP 1 Score: 253 bits (646), Expect = 5.630e-76
Identity = 132/142 (92.96%), Postives = 138/142 (97.18%), Query Frame = 1
Query:    4 PATFVKELIYRSLERHNLDKVYRQIQELRKRLRTREQKAVEEADLVSQAKLIRSKEQRVPRLQDLTMRPTLAGKTVGALEAHSNGLRFTSQKHAQPLDILYANIKLAFYQPCNGIIDTKVVLHFSLKHPIMVGKKAHREIQV 429
            PATFVKELIYRSLER NLDKVYRQIQELRKRLRTREQKAVEEADLV+QAKLIRSK+QRVPRLQDLTMRPTLAGKTVG+LEAHSNGLRFTSQKHA PLD LYANIK AFYQPCNG+IDTKV+LHFSLKHPIMVGKKAH+EIQV
Sbjct:  596 PATFVKELIYRSLERQNLDKVYRQIQELRKRLRTREQKAVEEADLVTQAKLIRSKDQRVPRLQDLTMRPTLAGKTVGSLEAHSNGLRFTSQKHA-PLDFLYANIKHAFYQPCNGVIDTKVILHFSLKHPIMVGKKAHKEIQV 736          
BLAST of mRNA_H-elongata_contig70660.14729.1 vs. uniprot
Match: A0A835Z130_9STRA (FACT complex subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z130_9STRA)

HSP 1 Score: 183 bits (464), Expect = 4.880e-51
Identity = 98/140 (70.00%), Postives = 115/140 (82.14%), Query Frame = 1
Query:   13 FVKELIYRSLERHNLDKVYRQIQELRKRLRTREQKAVEEADLVSQAKLIRSKEQRVPRLQDLTMRPTLAGKTVGALEAHSNGLRFTSQKHAQPLDILYANIKLAFYQPCNGIIDTKVVLHFSLKHPIMVGKKAHREIQVY 432
            FVKEL +RSL++ NL   +RQ+QELRKRLR REQKAVEEADLV QAKLIR  + +VPRL DLT+RP L GKT GALEAH+NGLRF S K  + ++ILYANI+LA +QPC G  DTKVVLHF L+HPIMVGKKAH+ +QVY
Sbjct:  412 FVKELTFRSLDQQNLGMAFRQVQELRKRLRLREQKAVEEADLVVQAKLIRMTDMKVPRLADLTLRPNLTGKTTGALEAHTNGLRFISIK-GESVEILYANIRLAVFQPCEGN-DTKVVLHFYLRHPIMVGKKAHKNVQVY 549          
BLAST of mRNA_H-elongata_contig70660.14729.1 vs. uniprot
Match: A0A7R9W7Y6_9STRA (FACT complex subunit (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W7Y6_9STRA)

HSP 1 Score: 151 bits (382), Expect = 2.150e-41
Identity = 82/143 (57.34%), Postives = 109/143 (76.22%), Query Frame = 1
Query:    7 ATFVKELIYRSLERHNLDKVYRQIQELRKRLRTREQKAVEEADLVSQAKLIRSKEQRVPRLQDLTMRPTLAG-KTVGALEAHSNGLRFTSQKHAQPLDILYANIKLAFYQPCNGIIDTKVVLHFSLKHPIMVGKKAHREIQVY 432
            A+F++E+ +RSLE HNL + YRQIQELRKR R +E + +EEA+LV Q KL+R+K +RVPRL DLTMRP  AG KT G LEAHSNG+RF S +  + +DI+YANIK A +QPC    +  V++HF LK+PIM+GKK  ++IQ +
Sbjct:  127 ASFIREMTFRSLESHNLTQAYRQIQELRKRERQKEIRELEEANLVKQEKLVRTKNERVPRLSDLTMRPVFAGRKTQGNLEAHSNGMRFISTR-GEVVDIMYANIKHAIFQPCEQ--EIMVLVHFHLKNPIMLGKKKQKDIQFF 266          
BLAST of mRNA_H-elongata_contig70660.14729.1 vs. uniprot
Match: A0A1Z5K1K7_FISSO (FACT complex subunit n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K1K7_FISSO)

HSP 1 Score: 156 bits (394), Expect = 2.380e-41
Identity = 81/143 (56.64%), Postives = 109/143 (76.22%), Query Frame = 1
Query:    7 ATFVKELIYRSLERHNLDKVYRQIQELRKRLRTREQKAVEEADLVSQAKLIRSKEQRVPRLQDLTMRPTLAG-KTVGALEAHSNGLRFTSQKHAQPLDILYANIKLAFYQPCNGIIDTKVVLHFSLKHPIMVGKKAHREIQVY 432
            A+F++EL +RSL+ HNL + +RQI ELRKR+RT+E +  EEADLV Q KL+R+K +RVPRL D+TMRP  AG KT G LEAHSNG+RF S +  + +D++Y+NIK A YQPC    +  V++HF LK+PIM+GKK H ++Q Y
Sbjct:  645 ASFIRELTFRSLDGHNLTQAFRQISELRKRVRTKELQQQEEADLVEQEKLVRTKNERVPRLADVTMRPVFAGRKTQGNLEAHSNGMRFISTRQ-EIVDVMYSNIKYAIYQPCEN--EIMVLIHFHLKNPIMIGKKKHNDVQFY 784          
BLAST of mRNA_H-elongata_contig70660.14729.1 vs. uniprot
Match: A0A7S1ULG9_9STRA (FACT complex subunit (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1ULG9_9STRA)

HSP 1 Score: 152 bits (384), Expect = 5.130e-40
Identity = 80/141 (56.74%), Postives = 110/141 (78.01%), Query Frame = 1
Query:   13 FVKELIYRSLERHNLDKVYRQIQELRKRLRTREQKAVEEADLVSQAKLIRSKEQRVPRLQDLTMRPTLAG-KTVGALEAHSNGLRFTSQKHAQPLDILYANIKLAFYQPCNGIIDTKVVLHFSLKHPIMVGKKAHREIQVY 432
            F+KE+++RSL+  NL + +RQI ELRKR+R+RE K  EEADLV QA+L R K+QR PRL D+T+RP L+G K++G LEAH+NG+RFTS +  + LDI+Y+N++ A  QPC    +T V LHF+LK+PIMVGKK H ++QV+
Sbjct:  586 FIKEMLFRSLQNENLRRAFRQINELRKRVRSREAKEAEEADLVEQARLERLKDQRAPRLADVTLRPQLSGRKSMGHLEAHANGMRFTSTR-GEYLDIMYSNVRHAIMQPCKE--ETMVALHFNLKNPIMVGKKKHHDVQVF 723          
BLAST of mRNA_H-elongata_contig70660.14729.1 vs. uniprot
Match: B7FSR1_PHATC (FACT complex subunit n=5 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FSR1_PHATC)

HSP 1 Score: 151 bits (381), Expect = 1.330e-39
Identity = 86/143 (60.14%), Postives = 105/143 (73.43%), Query Frame = 1
Query:    7 ATFVKELIYRSLERHNLDKVYRQIQELRKRLRTREQKAVEEADLVSQAKLIRSKEQRVPRLQDLTMRPTLAG-KTVGALEAHSNGLRFTSQKHAQPLDILYANIKLAFYQPCNGIIDTKVVLHFSLKHPIMVGKKAHREIQVY 432
            A+FV+E+ +RSL+ HNL   +RQI ELRKR R +E    EEA LV Q KLIR+K +RVPRL DLTMRP  AG KT G LEAHSNGLRF S + ++ +DI+Y NIK A YQPC G  D  V++HF LK+PIMVGKK H +IQ +
Sbjct:  622 ASFVREMTFRSLDGHNLTLAFRQISELRKRERQKELLQQEEATLVKQEKLIRTKNERVPRLADLTMRPVFAGRKTQGNLEAHSNGLRFISTR-SEIVDIMYNNIKYAIYQPCEG--DIMVLIHFHLKNPIMVGKKKHLDIQFF 761          
BLAST of mRNA_H-elongata_contig70660.14729.1 vs. uniprot
Match: A0A6S9A9U8_9STRA (FACT complex subunit n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9A9U8_9STRA)

HSP 1 Score: 150 bits (379), Expect = 2.490e-39
Identity = 80/143 (55.94%), Postives = 108/143 (75.52%), Query Frame = 1
Query:    7 ATFVKELIYRSLERHNLDKVYRQIQELRKRLRTREQKAVEEADLVSQAKLIRSKEQRVPRLQDLTMRPTLAG-KTVGALEAHSNGLRFTSQKHAQPLDILYANIKLAFYQPCNGIIDTKVVLHFSLKHPIMVGKKAHREIQVY 432
            A+F++E+ +RSL+ HNL + +RQI ELRKR R +E + +EEA+LV QAKL+R+K +RVPRL DLTMRP  AG KT G LEAHSNGLRF S +  + +DI+Y NIK A +QPC    +  V++HF L+HPIM+GKK  ++IQ +
Sbjct:  645 ASFIREMTFRSLDSHNLTQAFRQISELRKRARQKELRELEEANLVKQAKLVRTKTERVPRLSDLTMRPVFAGRKTQGNLEAHSNGLRFISMR-GEIVDIMYPNIKHAIFQPCEN--EIMVLVHFHLRHPIMLGKKKQQDIQFF 784          
BLAST of mRNA_H-elongata_contig70660.14729.1 vs. uniprot
Match: A0A7S4JB19_9STRA (FACT complex subunit (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JB19_9STRA)

HSP 1 Score: 148 bits (373), Expect = 1.600e-38
Identity = 81/143 (56.64%), Postives = 107/143 (74.83%), Query Frame = 1
Query:    7 ATFVKELIYRSLERHNLDKVYRQIQELRKRLRTREQKAVEEADLVSQAKLIRSKEQRVPRLQDLTMRPTLAG-KTVGALEAHSNGLRFTSQKHAQPLDILYANIKLAFYQPCNGIIDTKVVLHFSLKHPIMVGKKAHREIQVY 432
            A+F++E+ +RSLE HNL + YRQIQELRKR R +E +  EEADLV Q KL+R+K +RVPRL DLTMRP  AG KT G LE+H+NG+RF S +  + +DI+YANIK A +QPC    +  V++HF LK+PIM+GKK   +IQ +
Sbjct:  638 ASFIREMTFRSLEPHNLTQAYRQIQELRKRERQKELREQEEADLVKQEKLVRTKTERVPRLADLTMRPVFAGRKTQGNLESHTNGMRFISTR-GEVVDIMYANIKHAIFQPCEQ--EIMVLVHFHLKNPIMLGKKKQADIQFF 777          
BLAST of mRNA_H-elongata_contig70660.14729.1 vs. uniprot
Match: A0A7S2A8Z5_TRICV (FACT complex subunit n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A8Z5_TRICV)

HSP 1 Score: 147 bits (370), Expect = 2.070e-38
Identity = 79/143 (55.24%), Postives = 106/143 (74.13%), Query Frame = 1
Query:    7 ATFVKELIYRSLERHNLDKVYRQIQELRKRLRTREQKAVEEADLVSQAKLIRSKEQRVPRLQDLTMRPTLAG-KTVGALEAHSNGLRFTSQKHAQPLDILYANIKLAFYQPCNGIIDTKVVLHFSLKHPIMVGKKAHREIQVY 432
            A+F++E+ +RSLE HNL + YRQIQELRKR R +E +  EEA+LV Q KLIR+K +RVPRL DLTMRP  A  KT G LEAH+NG+RF S +  + +D++Y NIK A YQPC    +  V++HF L++PIM+GKK  ++IQ +
Sbjct:  199 ASFIREMTFRSLEPHNLTQAYRQIQELRKRERQKELREQEEANLVKQEKLIRTKNERVPRLSDLTMRPVFASRKTQGNLEAHTNGMRFISTR-GEVVDVMYGNIKHAIYQPCEN--EIMVLIHFHLRNPIMLGKKKQKDIQFF 338          
BLAST of mRNA_H-elongata_contig70660.14729.1 vs. uniprot
Match: A0A7S0GEE7_9STRA (FACT complex subunit n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GEE7_9STRA)

HSP 1 Score: 147 bits (371), Expect = 2.440e-38
Identity = 77/143 (53.85%), Postives = 109/143 (76.22%), Query Frame = 1
Query:    7 ATFVKELIYRSLERHNLDKVYRQIQELRKRLRTREQKAVEEADLVSQAKLIRSKEQRVPRLQDLTMRPTLAG-KTVGALEAHSNGLRFTSQKHAQPLDILYANIKLAFYQPCNGIIDTKVVLHFSLKHPIMVGKKAHREIQVY 432
            A+F++EL +RSL+ HNL + +RQI ELRKR+R RE +  EEA+LV Q KL+R+K +RVPRL DLT+RP  +G KT G +EAH+NGLRF S +  + +D++Y+NIK A YQPC    +  V++HF L++PIM+GKK  ++IQV+
Sbjct:  319 ASFIRELTFRSLDSHNLTQAFRQISELRKRVRQREIREQEEANLVKQEKLVRTKNERVPRLSDLTLRPVFSGRKTQGNIEAHTNGLRFISTR-GEIVDVMYSNIKHAIYQPCEN--EIMVLIHFHLRNPIMLGKKRQKDIQVF 458          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig70660.14729.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPY1_ECTSI5.630e-7692.96FACT complex subunit n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A835Z130_9STRA4.880e-5170.00FACT complex subunit n=1 Tax=Tribonema minus TaxID... [more]
A0A7R9W7Y6_9STRA2.150e-4157.34FACT complex subunit (Fragment) n=1 Tax=Pseudictyo... [more]
A0A1Z5K1K7_FISSO2.380e-4156.64FACT complex subunit n=2 Tax=Fistulifera solaris T... [more]
A0A7S1ULG9_9STRA5.130e-4056.74FACT complex subunit (Fragment) n=1 Tax=Phaeomonas... [more]
B7FSR1_PHATC1.330e-3960.14FACT complex subunit n=5 Tax=Phaeodactylum tricorn... [more]
A0A6S9A9U8_9STRA2.490e-3955.94FACT complex subunit n=3 Tax=Ditylum brightwellii ... [more]
A0A7S4JB19_9STRA1.600e-3856.64FACT complex subunit (Fragment) n=1 Tax=Odontella ... [more]
A0A7S2A8Z5_TRICV2.070e-3855.24FACT complex subunit n=1 Tax=Trieres chinensis Tax... [more]
A0A7S0GEE7_9STRA2.440e-3853.85FACT complex subunit n=1 Tax=Proboscia inermis Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig70660contigH-elongata_contig70660:406..1879 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score255.4
Seed ortholog evalue1.6e-65
Seed eggNOG ortholog2880.D7FPY1
Preferred nameSPT16
KEGG koko:K20093
GOsGO:0000003,GO:0000228,GO:0000785,GO:0000790,GO:0000791,GO:0001672,GO:0003006,GO:0003674,GO:0003682,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005719,GO:0005730,GO:0006139,GO:0006325,GO:0006333,GO:0006351,GO:0006354,GO:0006355,GO:0006357,GO:0006366,GO:0006368,GO:0006725,GO:0006807,GO:0006996,GO:0007275,GO:0008023,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009791,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010228,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016043,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0022414,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031491,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032774,GO:0032784,GO:0032786,GO:0032968,GO:0032991,GO:0033043,GO:0033044,GO:0034243,GO:0034641,GO:0034645,GO:0034654,GO:0034724,GO:0034728,GO:0035101,GO:0042393,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0044877,GO:0045893,GO:0045935,GO:0045944,GO:0046483,GO:0048518,GO:0048522,GO:0048608,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051276,GO:0060255,GO:0061458,GO:0065007,GO:0070013,GO:0071704,GO:0071824,GO:0071840,GO:0080090,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576,GO:1902275,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141
EggNOG free text desc.Fact complex subunit
EggNOG OGsCOG5406@1,KOG1189@2759
EC3.6.4.12
COG Functional cat.BKL
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03036
Hectar predicted targeting categoryother localisation
Exons3
Model size435
Cds size435
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig70660.14729.1prot_H-elongata_contig70660.14729.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig70660 406..1879 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931105.6416109-CDS-H-elongata_contig70660:405..5551622931105.6416109-CDS-H-elongata_contig70660:405..555Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig70660 406..555 -
1691679700.344494-CDS-H-elongata_contig70660:405..5551691679700.344494-CDS-H-elongata_contig70660:405..555Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig70660 406..555 -
1622931105.6546812-CDS-H-elongata_contig70660:1050..12151622931105.6546812-CDS-H-elongata_contig70660:1050..1215Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig70660 1051..1215 -
1691679700.363914-CDS-H-elongata_contig70660:1050..12151691679700.363914-CDS-H-elongata_contig70660:1050..1215Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig70660 1051..1215 -
1622931105.6744184-CDS-H-elongata_contig70660:1759..18791622931105.6744184-CDS-H-elongata_contig70660:1759..1879Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig70660 1760..1879 -
1691679700.373586-CDS-H-elongata_contig70660:1759..18791691679700.373586-CDS-H-elongata_contig70660:1759..1879Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig70660 1760..1879 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig70660.14729.1

>prot_H-elongata_contig70660.14729.1 ID=prot_H-elongata_contig70660.14729.1|Name=mRNA_H-elongata_contig70660.14729.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=145bp
KPATFVKELIYRSLERHNLDKVYRQIQELRKRLRTREQKAVEEADLVSQA
KLIRSKEQRVPRLQDLTMRPTLAGKTVGALEAHSNGLRFTSQKHAQPLDI
LYANIKLAFYQPCNGIIDTKVVLHFSLKHPIMVGKKAHREIQVYR
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mRNA from alignment at H-elongata_contig70660:406..1879-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig70660.14729.1 ID=mRNA_H-elongata_contig70660.14729.1|Name=mRNA_H-elongata_contig70660.14729.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1474bp|location=Sequence derived from alignment at H-elongata_contig70660:406..1879- (Himanthalia elongata Himel1 dioecious)
AAACCGGCCACGTTTGTGAAGGAGCTGATATACCGTAGCCTGGAAAGACA CAACCTGGATAAGGTGTACCGACAGATACAAGAGCTAAGGAAACGCCTCC GTACGCGAGAGCAAAAGGCGGTGAGTTTTTCGTTCCTTTTTTATTGATCT TTCCGCATAAGCTTTGTTTTCTCTTCGCTTTTGTGATGTTTTGCATTCTC CAGCGACTATAATACGATCCACTCTATTTTCAGGTTATTTTGTTTTTCCT CCCTCCTTTTTCTCCTCTTTCTCGGTCTTCCTTTCCCTCTTTTTATATTT TGCCCTCATTTTTTCGTCATTTCGTGCTATCCCCCTCTCTCGGTTGCCTA AAAAAAAACGTTCCACGCGATTCAATCCAATCTGATATGATCCTGAGGTA GTTAACAACACACTCTGGGCCGTAACTGCTCCCCAGAGCTCCTGCGTCAT CGCGAACAATAAAAACATGTTCGCGTAAAGTCTTCCGCGAAGGCATGTGC TCGAACCAAGCCAGTGGTTACTTCTAAAGTAACTCCCTCGTTCGTCCAAC AACCCTTTCTCGTTCCCCTTTTTTTTCGGTGGGGGGGGGGGGGCGTCATT AGTGCCCATCCTGATATTAATATTGATGACCGTTGATGGCCGTTGATATG ACCGTTGGGCACAGGTGGAGGAGGCCGATCTCGTATCGCAGGCTAAGCTT ATCCGGAGTAAGGAGCAGCGGGTGCCTCGGCTTCAGGACTTAACGATGCG GCCCACGCTGGCGGGAAAGACGGTCGGGGCGCTGGAGGCGCACTCTAACG GGTTGCGCTTTACGTCGCAGAAACACGCCGTGAGTCGGCGACTGAAAAAC ATCAAAATATGCCCACTATTAATAGCTTTTCATTTATTTACCAATGTATT GGTATTGTGTATATTTACTTATAAATTACTGAATAAATGAATCAATGCAT GTGATGTGATGTGTGTGTTGATTCATTACGCCAGCAAGAATCCCATTAGG TGGCCCATGCTCATAGTGGAATTTTCTCCGTATGCAGTCAGTGGCAGAAT GTCCGTCATACCGTCATACCGTTCTATTAATAGGGGATATATAGAAAGGA GCGATTGGCCATCAACGATCGATCATGTAGTAGGAAACAGTGCTCCGCCC TTGAAAGGACGCGTGATCAATGATGTAACAGCTAAAGGGGATCAAACTGG AGAACGTAGAACGTCTCTTTCCTTATTGTCGCCGCCCCGTTTGACTTGTG TTGCTTTGTGATTGGTCAATGACGATGATGACGATTGGCTGACGGTGCGA TGACGATGATGATGACGCTGAGAGCAGCCGTTGGACATTCTGTATGCGAA CATCAAGCTGGCGTTCTACCAGCCCTGCAACGGCATCATCGACACCAAGG TGGTGCTTCACTTCAGTCTAAAGCACCCCATCATGGTGGGAAAGAAGGCT CACAGGGAGATACAGGTATATAGA
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Coding sequence (CDS) from alignment at H-elongata_contig70660:406..1879-

>mRNA_H-elongata_contig70660.14729.1 ID=mRNA_H-elongata_contig70660.14729.1|Name=mRNA_H-elongata_contig70660.14729.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=870bp|location=Sequence derived from alignment at H-elongata_contig70660:406..1879- (Himanthalia elongata Himel1 dioecious)
AAACCGGCCACGTTTGTGAAGGAGCTGATATACCGTAGCCTGGAAAGACA
CAACCTGGATAAGGTGTACCGACAGATACAAGAGCTAAGGAAACGCCTCC
GTACGCGAGAGCAAAAGGCGAAACCGGCCACGTTTGTGAAGGAGCTGATA
TACCGTAGCCTGGAAAGACACAACCTGGATAAGGTGTACCGACAGATACA
AGAGCTAAGGAAACGCCTCCGTACGCGAGAGCAAAAGGCGGTGGAGGAGG
CCGATCTCGTATCGCAGGCTAAGCTTATCCGGAGTAAGGAGCAGCGGGTG
CCTCGGCTTCAGGACTTAACGATGCGGCCCACGCTGGCGGGAAAGACGGT
CGGGGCGCTGGAGGCGCACTCTAACGGGTTGCGCTTTACGTCGCAGAAAC
ACGCCGTGGAGGAGGCCGATCTCGTATCGCAGGCTAAGCTTATCCGGAGT
AAGGAGCAGCGGGTGCCTCGGCTTCAGGACTTAACGATGCGGCCCACGCT
GGCGGGAAAGACGGTCGGGGCGCTGGAGGCGCACTCTAACGGGTTGCGCT
TTACGTCGCAGAAACACGCCCAGCCGTTGGACATTCTGTATGCGAACATC
AAGCTGGCGTTCTACCAGCCCTGCAACGGCATCATCGACACCAAGGTGGT
GCTTCACTTCAGTCTAAAGCACCCCATCATGGTGGGAAAGAAGGCTCACA
GGGAGATACAGGTATATAGACAGCCGTTGGACATTCTGTATGCGAACATC
AAGCTGGCGTTCTACCAGCCCTGCAACGGCATCATCGACACCAAGGTGGT
GCTTCACTTCAGTCTAAAGCACCCCATCATGGTGGGAAAGAAGGCTCACA
GGGAGATACAGGTATATAGA
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