mRNA_H-elongata_contig70636.14726.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig70636.14726.1 vs. uniprot
Match: A0A6H5JDK4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDK4_9PHAE) HSP 1 Score: 293 bits (750), Expect = 5.800e-93 Identity = 137/201 (68.16%), Postives = 162/201 (80.60%), Query Frame = 3
Query: 3 VGYKKEKLNRETFAFLMEWYSSP--TRKAVKESWPPDNTYVNHWKHDTTIVHAPPRIHRRLYDDLLVLMEEWSGLKLKPTACYGARNYFRGSVLANHVDRIDTHVVSAIINLAQENVDTDWPLFVRGHDGVARNIFIQPGEIIFYESASVLHGRPEPFQGDSFTNIFVHFAPVEGWDVSAKDVNKAAREGARKKSMEAKAS 599
+GYKKEKLN +T+A+LMEWY S + V E W PDNTYVNHW+ DT + AP RIHRRLY DLL +MEEWSG+KLK TACYG R+Y+RGS+LANHVDR+DTHV+SAIIN ENVDTDW L+VRGHDGVAR++FI+PGEIIFYESASV+HGRP+ FQG F NIFVHF+P EGWDV+ KDV +AA G +K E A+
Sbjct: 99 LGYKKEKLNPDTYAYLMEWYHSQMENKAPVTEKWAPDNTYVNHWEVDTKMTAAPTRIHRRLYQDLLPVMEEWSGIKLKSTACYGVRHYYRGSILANHVDRVDTHVISAIIN---ENVDTDWGLYVRGHDGVARDLFIEPGEIIFYESASVIHGRPQAFQGSRFANIFVHFSPAEGWDVTTKDVQRAANLGKTQKGHEESAT 296
BLAST of mRNA_H-elongata_contig70636.14726.1 vs. uniprot
Match: D7FHL7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHL7_ECTSI) HSP 1 Score: 231 bits (589), Expect = 3.730e-69 Identity = 114/201 (56.72%), Postives = 137/201 (68.16%), Query Frame = 3
Query: 3 VGYKKEKLNRETFAFLMEWYSSP--TRKAVKESWPPDNTYVNHWKHDTTIVHAPPRIHRRLYDDLLVLMEEWSGLKLKPTACYGARNYFRGSVLANHVDRIDTHVVSAIINLAQENVDTDWPLFVRGHDGVARNIFIQPGEIIFYESASVLHGRPEPFQGDSFTNIFVHFAPVEGWDVSAKDVNKAAREGARKKSMEAKAS 599
+GYKKEKLN +T+A+LMEWY + V E W DNTYVNHW+ T + AP RIHRRLY DLL +MEEWSG KLK TACYG R+Y+RGS+LANHVDR+DTHV+SAIIN+ Q PGEIIFYESASV+HGRP+ FQG F NIFVHF+P EGWDV+A V +AA+ G +K + A+
Sbjct: 99 LGYKKEKLNPDTYAYLMEWYHGQMENKMPVTEKWALDNTYVNHWEVGTKMTTAPMRIHRRLYQDLLPVMEEWSGTKLKSTACYGVRHYYRGSILANHVDRVDTHVISAIINVEQ------------------------PGEIIFYESASVIHGRPQAFQGSRFANIFVHFSPAEGWDVTANTVERAAKFGKTQKRQQESAT 275
BLAST of mRNA_H-elongata_contig70636.14726.1 vs. uniprot
Match: A0A7S4E9F8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E9F8_9STRA) HSP 1 Score: 163 bits (412), Expect = 5.020e-41 Identity = 82/185 (44.32%), Postives = 116/185 (62.70%), Query Frame = 3
Query: 3 VGYKKEKLNRETFAFLMEWYSSPTRKAVKESWPPDNTYVNHWKHDTTIVHAPPRIHRRL--------YDDLLVLMEEWSGLKLKPTACYGARNYFRGSVLANHVDRIDTHVVSAIINLAQENVDTDWPLFVRGHDGVARNIFIQPGEIIFYESASVLHGRPEPFQGDSFTNIFVHFAPVEGWDVS 533
+G+ K + + + E++ ESWPP NTYVNHW D+T+ R + L +D ++E W+G KLKPT+ YG R+YFRG++LA HVDR+ V SAIIN+ Q+ V+ DWP+ V GHDGVA N+ ++PG++ YES +VLHGRP P +G+ + N+FVHF PV+ D S
Sbjct: 103 LGFAKLRAPKAVYEAAREFWDLHRETQTSESWPPGNTYVNHWVADSTMCSFEDRRLQPLGFKTKDIIWDQARPILEAWTGQKLKPTSLYGIRSYFRGAILATHVDRLPL-VTSAIINVDQD-VEEDWPIEVVGHDGVAYNVTLKPGDMALYESHTVLHGRPFPLKGNFYANLFVHFIPVDPDDPS 285
BLAST of mRNA_H-elongata_contig70636.14726.1 vs. uniprot
Match: B5YN86_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YN86_THAPS) HSP 1 Score: 155 bits (393), Expect = 6.780e-39 Identity = 73/179 (40.78%), Postives = 115/179 (64.25%), Query Frame = 3
Query: 3 VGYKKEKLNRETFAFLMEWYSSPTRKAVKESWPPDNTYVNHWKHDTTIVHAPPR--------IHRRLYDDLLVLMEEWSGLKLKPTACYGARNYFRGSVLANHVDRIDTHVVSAIINLAQENVDTDWPLFVRGHDGVARNIFIQPGEIIFYESASVLHGRPEPFQGDSFTNIFVHFAPV 515
VG+KK + E F L ++ + R+ +E WP NTYVN+WK T +V+ + ++++D + ++EEW+G++L+ ++ YG R Y RG++L+ H DR+ + S IIN+AQ+ V+ DWPL V G DG+A N+ + PG+++ YES S++HGRP P QG+ F NIF+HF P
Sbjct: 98 VGFKKVRAPAEVFNLLSNYWDTNLRRRQQEKWPTGNTYVNYWKAPTYMVNVENTNLRSGGQLLKQKIWDGVKPVLEEWTGMELEQSSMYGIRQYTRGAILSPHADRMPL-ISSCIINVAQD-VEEDWPLEVYGRDGLAYNVTMSPGDMVLYESHSLIHGRPFPLQGEYFANIFIHFRPT 274
BLAST of mRNA_H-elongata_contig70636.14726.1 vs. uniprot
Match: A0A7S4KHC4_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4KHC4_9EUKA) HSP 1 Score: 148 bits (373), Expect = 1.090e-36 Identity = 73/180 (40.56%), Postives = 104/180 (57.78%), Query Frame = 3
Query: 3 VGYKKEKLNRETFAFLMEWYSSPTRKAVKESWPPDNTYVNHWKHDTTIVHAPPRIHRRLYDDLLVLMEEWSG--LKLKPTACYGARNYFRGSVLANHVDRIDTHVVSAIINLAQENVDTDWPLFVRGHDGVARNIFIQPGEIIFYESASVLHGRPEPFQGDSFTNIFVHFAPVEGWDVSA 536
VGY KL+ F L +Y + E+W P + +VNHW+ T ++ + +R+ D + ++E W G L+ TA YG R Y S L NHVDR TH VS II + Q+ D DW L V GHDG + + PG+++ YESASV+HGRP+P G+ + N+FVHF P GW++ +
Sbjct: 177 VGYAYSKLSDSLFDDLFNYYHDNKHRQTFENWRPADHHVNHWESPTYMLPLTQSLRQRVIDYCVPILETWIGGETPLEFTALYGIRTYSNESYLLNHVDRSATHAVSVIIQVDQKVTD-DWLLEVHGHDGKVEELPMAPGQMVLYESASVIHGRPKPLNGEYYANVFVHFRPKNGWNLDS 355
BLAST of mRNA_H-elongata_contig70636.14726.1 vs. uniprot
Match: A0A7S3PVT5_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PVT5_9STRA) HSP 1 Score: 149 bits (377), Expect = 2.030e-36 Identity = 74/177 (41.81%), Postives = 109/177 (61.58%), Query Frame = 3
Query: 3 VGYKKEKLNRETFAFLMEWYSSPTRKAVKESWPPDNTYVNHWKHDTTIVHAPP-------RIHRRLYDDLLVLMEEWSGLKLKPTACYGARNYFRGSVLANHVDRIDTHVVSAIINLAQENVDTDWPLFVRGHDGVARNIFIQPGEIIFYESASVLHGRPEPFQGDSFTNIFVHFAP 512
VGYKK K+ F L +++ V E W P + ++N+W +V+ ++ L+ + + EW+G++L P++ YG R Y G++L++HVDR+ + SAIIN+AQ+ V DWPL V GHDG+ARNI IQPGE+I YES SV+HGRP P +G + N+F+HF P
Sbjct: 131 VGYKKIKVPANLFNLLSNFWNENKNNEVDEFWVPGSCFLNYWASSVKMVNVQDYSIGGGGKLLEELWGSTVETISEWTGMRLVPSSIYGIRVYKEGAILSSHVDRLPL-ISSAIINVAQD-VKEDWPLEVIGHDGIARNITIQPGEMILYESHSVIHGRPFPLKGKYYANVFIHFEP 305
BLAST of mRNA_H-elongata_contig70636.14726.1 vs. uniprot
Match: A0A7S2R8I7_9STRA (Hypothetical protein n=2 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R8I7_9STRA) HSP 1 Score: 150 bits (378), Expect = 3.420e-36 Identity = 76/179 (42.46%), Postives = 109/179 (60.89%), Query Frame = 3
Query: 3 VGYKKEKLNRETFAFLMEWYSSPTRKAVKESWPPDNTYVNHWKHDTTIVHAPPR--------IHRRLYDDLLVLMEEW-SGLKLKPTACYGARNYFRGSVLANHVDRIDTHVVSAIINLAQENVDTDWPLFVRGHDGVARNIFIQPGEIIFYESASVLHGRPEPFQGDSFTNIFVHFAP 512
+GYKK K + L ++ S + + E+WP NTY NHW T+++ + RL+ + ++ +W G+ L+P + YG R Y GS+LA HVDR+ VVSAIIN+AQ+ VD DWP+ + GHDG+ARNI + PG+++ YES SV+HGRP P +G NIF+HF P
Sbjct: 146 LGYKKIKAPKSIVKLLTSFWKSNQNRQITETWPAGNTYTNHWYSPTSMLSVSDADLKGGGMALRNRLWMETQNVISKWIEGVSLQPVSLYGVRIYKGGSILAPHVDRLPL-VVSAIINVAQD-VDEDWPIEIYGHDGIARNITMNPGDMLLYESHSVIHGRPFPLRGRYHANIFIHFEP 322
BLAST of mRNA_H-elongata_contig70636.14726.1 vs. uniprot
Match: A0A7S2THP0_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2THP0_9EUKA) HSP 1 Score: 145 bits (367), Expect = 9.980e-36 Identity = 70/175 (40.00%), Postives = 102/175 (58.29%), Query Frame = 3
Query: 3 VGYKKEKLNRETFAFLMEWYSSPTRKAVKESWPPDNTYVNHWKHDTTIV-----HAPPRIHRRLYDDLLVLMEEWSGLKLKPTACYGARNYFRGSVLANHVDRIDTHVVSAIINLAQENVDTDWPLFVRGHDGVARNIFIQPGEIIFYESASVLHGRPEPFQGDSFTNIFVHFAP 512
+G++K K+ + + L +Y + V E WP N Y+NHW+ ++ H R++++ L +EEWSG +L+ T YG R Y + L NHVDR+ THVVSAI+++A + D WPL + H G NI I PGE++ YESA+ +HGRP FQG+ + N F HF P
Sbjct: 154 LGFEKRKIPDDVWELLRSYYENNKDSIVLEKWPSTNPYINHWESVPFMIWLPELHTGDETKRKIFEGLRPHLEEWSGTELEHTDLYGMRVYKNNTFLENHVDRVATHVVSAIMHIADKQ-DIPWPLNIYDHYGNEHNITISPGEMVLYESATCVHGRPSLFQGEYYVNAFAHFRP 327
BLAST of mRNA_H-elongata_contig70636.14726.1 vs. uniprot
Match: A0A7S4NSY5_9EUKA (Hypothetical protein n=2 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4NSY5_9EUKA) HSP 1 Score: 145 bits (366), Expect = 1.220e-35 Identity = 73/178 (41.01%), Postives = 105/178 (58.99%), Query Frame = 3
Query: 3 VGYKKEKLNRETFAFLMEWYSSPTRKAVKESWPPDNTYVNHWKHDTTIVHAPPRIHRRLYDDLLVLMEEWSG--LKLKPTACYGARNYFRGSVLANHVDRIDTHVVSAIINLAQENVDTDWPLFVRGHDGVARNIFIQPGEIIFYESASVLHGRPEPFQGDSFTNIFVHFAPVEGWDV 530
VGYK L + + +++ + E W +N +VNHW+ + ++ P + R L + ++EEW G + L+ T+ YG R Y S+L NHVDR TH VSAII + Q D DW L V GHDGVAR++ + PG++ YESASV+HGR +P GD F N+F+H+ P W+V
Sbjct: 183 VGYKIVNLPENVWGEIKDYWKNNRHNMKLERWDQENHHVNHWQSPSYMLWLPHKTQRLLKIEAQKILEEWIGGEIPLEWTSLYGIRMYTNHSILLNHVDRSATHAVSAIIQVDQRVTD-DWLLEVIGHDGVARHLKLLPGQMALYESASVVHGREKPLNGDYFANLFIHYRPKNNWNV 359
BLAST of mRNA_H-elongata_contig70636.14726.1 vs. uniprot
Match: A0A7S2H644_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H644_9STRA) HSP 1 Score: 142 bits (358), Expect = 1.410e-35 Identity = 73/179 (40.78%), Postives = 105/179 (58.66%), Query Frame = 3
Query: 6 GYKKEKLNRETFAFLMEWYSSPTRKAVKESWPPDNTYVNHWKHDTT--IVHAPPRIHRRLYDDLLVLMEEWSGL---KLKPTACYGARNYFRGSVLANHVDRIDTHVVSAIINLAQENVDTDWPLFVRGHDGVARNIFIQPGEIIFYESASVLHGRPEPFQGDSFTNIFVHFAP-VEGW 524
GY K L + T+ +L EWY +ES N +H+ + H P + RL ++ ++ EWSG +L+ T+CYG R Y GS L HVD + TH VS IIN+AQEN++ DW L ++ HDG + + PG+++ YESA LHGRP+P +GDS+ NIF+HF P ++ W
Sbjct: 83 GYLKLPLPQTTYEWLQEWYLQNEELEEQES----NAGAVGTQHEVPWFVRHVPGDLKDRLALEVRPMLAEWSGFTEEELELTSCYGIRRYVNGSKLRMHVDTVQTHAVSVIINVAQENMEEDWVLEIKTHDGTYSYVTMTPGDVVLYESAKCLHGRPDPLKGDSYANIFLHFKPGLDKW 257 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig70636.14726.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig70636.14726.1 >prot_H-elongata_contig70636.14726.1 ID=prot_H-elongata_contig70636.14726.1|Name=mRNA_H-elongata_contig70636.14726.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=189bp MEWYSSPTRKAVKESWPPDNTYVNHWKHDTTIVHAPPRIHRRLYDDLLVLback to top mRNA from alignment at H-elongata_contig70636:522..3114+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig70636.14726.1 ID=mRNA_H-elongata_contig70636.14726.1|Name=mRNA_H-elongata_contig70636.14726.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2593bp|location=Sequence derived from alignment at H-elongata_contig70636:522..3114+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig70636:522..3114+ >mRNA_H-elongata_contig70636.14726.1 ID=mRNA_H-elongata_contig70636.14726.1|Name=mRNA_H-elongata_contig70636.14726.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1134bp|location=Sequence derived from alignment at H-elongata_contig70636:522..3114+ (Himanthalia elongata Himel1 dioecious)back to top |