mRNA_H-elongata_contig70591.14716.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig70591.14716.1 vs. uniprot
Match: D8LF54_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF54_ECTSI) HSP 1 Score: 253 bits (646), Expect = 1.740e-82 Identity = 130/186 (69.89%), Postives = 149/186 (80.11%), Query Frame = 1
Query: 7 SEQGRFYHTLEHLADMLEGAERDFKEICQPRLVQLAIFFHDAVYDPKSSSNEEDSEALFRKFSQAARMKPSDITIVSNYIIATKLHDVSGSDDTDLRAFIDLDMAVLGRERTAYLIYASQQIREEYAHVPTDTYCQKRAQVLRDFLAT-PIFATDLYRKELEPAARMNLDAEIAMLCAGAIPSNTT 561
SE+GR YHT EH+ADMLE A+RDF + PRLVQLAIFFHD VYDPKS SNEEDSEALFRKFS+A + SD T VS+YIIATK H VSGSDD DLRAFIDLDMAV+GRER+ YL YASQ IREEY HVP DTYC+KRA++LR+FL+T IFATD Y++ E AR N+ AE+ ML AG IP+ T
Sbjct: 37 SEEGRHYHTFEHVADMLEQADRDFPNLRHPRLVQLAIFFHDVVYDPKSGSNEEDSEALFRKFSEAVGLSASDSTTVSDYIIATKRHSVSGSDDQDLRAFIDLDMAVVGRERSGYLTYASQ-IREEYIHVPADTYCKKRAEILREFLSTGSIFATDEYQRTFEAKARENVAAEVEMLNAGVIPTGCT 221
BLAST of mRNA_H-elongata_contig70591.14716.1 vs. uniprot
Match: B7FQJ3_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FQJ3_PHATC) HSP 1 Score: 138 bits (347), Expect = 4.860e-37 Identity = 79/190 (41.58%), Postives = 112/190 (58.95%), Query Frame = 1
Query: 7 SEQGRFYHTLEHLADMLE--------GAERDFKEICQPRLVQLAIFFHDAVYDPKSSSNEEDSEALFRKFSQAARMKPSDI-TIVSNYIIATKLHDVSGSDDTDLRAFIDLDMAVLGRERTAYLIYASQQIREEYAHVPTDTYCQKRAQVLRDFLATPIFATDLYRKELEPAARMNLDAEIAMLCAGAIP 549
+E RFYHT HL +ML G E + + + L+IFFHDA+Y+ +SSSNEE+S LF++F + + + + T+V +I+ATK H S + L F+DLDMAVLG+ +Y+ YAS IR EY +P DTYCQKRA VL F+ +F T + E A+ N+ E+ +L AG+IP
Sbjct: 61 TETTRFYHTAVHLEEMLHFFRVLEERGCMSGVSET-ERQAILLSIFFHDAIYESRSSSNEENSAQLFQEFCRDTKSPDAVVNTLVDEFILATKTHMTSDNHTVALATFLDLDMAVLGKHLESYISYASM-IRREYDFIPHDTYCQKRADVLEAFMGNRVFGTKVMYDAFEERAKENVRYEVDLLRAGSIP 248
BLAST of mRNA_H-elongata_contig70591.14716.1 vs. uniprot
Match: A0A210PWH6_MIZYE (Uncharacterized protein n=1 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=A0A210PWH6_MIZYE) HSP 1 Score: 135 bits (340), Expect = 2.160e-36 Identity = 80/186 (43.01%), Postives = 109/186 (58.60%), Query Frame = 1
Query: 7 SEQGRFYHTLEHLADMLEGAERDFKEI--CQPRLVQLAIFFHDAVYDPKSSSNEEDSEALFRKFSQAAR-MKPSDITIVSNYIIATKLHD-VSGSDDTDLRAFIDLDMAVLGRERTAYLIYASQQIREEYAHVPTDTYCQKRAQVLRDFLAT-PIFATDLYRKELEPAARMNLDAEIAMLCAGAIP 549
S+ R YHTL+HL +M + + I C PRLV LA+FFHD +Y+PK NEE S F +++ + D V ++I+ TK H + G + D F+D+DMAVLGR Y YA+Q IR EY HVP + Y KRAQ+L DFL P+F+T L++K+ E A+ NL EI L +IP
Sbjct: 37 SDPARHYHTLQHLREMFQHFDFAGGHITFCYPRLVTLAVFFHDIIYEPKKPDNEERSADKFEEYAAEVNVLSDVDCKKVKDWILLTKSHTALKGDNSGDEHYFLDIDMAVLGRPVADYDEYANQ-IRAEYIHVPEEIYRSKRAQILEDFLTRLPLFSTKLFQKQFEDRAKTNLIREIGRLRDNSIP 221
BLAST of mRNA_H-elongata_contig70591.14716.1 vs. uniprot
Match: A0A1Z5KJ21_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KJ21_FISSO) HSP 1 Score: 128 bits (321), Expect = 1.980e-33 Identity = 83/182 (45.60%), Postives = 103/182 (56.59%), Query Frame = 1
Query: 19 RFYHTLEHLADML---EGAERDFKEIC-QPRLVQLAIFFHDAVYDPKSSSNEEDSEALFRKFSQAARMKPSDITIVSNYIIATKLHDVSGSDDTDLRAF-IDLDMAVLGRERTAYLIYASQQIREEYAHVPTDTYCQKRAQVLRDFLATP-IFATDLYRKELEPAARMNLDAEIAMLCAGAI 546
R YHT H+ +ML F Q R V LAIFFHDA+YD S++NEEDS LF+ F +V N I+ATK H DT AF +DLD++VLG+ AY YA IR+EY+HVP +TYCQKRA +L FL I+ T L+R+ E AR NL AEI +L G I
Sbjct: 56 RHYHTAVHVQEMLLYFHSLRPQFLLSAEQQRAVILAIFFHDAIYDATSNTNEEDSVKLFQSFETNG--------LVDNMILATKSHHSGDLSDTSAVAFFLDLDLSVLGKTEEAYQQYAIL-IRKEYSHVPQETYCQKRADILETFLQQQNIYKTSLFREMFEERARSNLAAEIRLLRQGVI 228
BLAST of mRNA_H-elongata_contig70591.14716.1 vs. uniprot
Match: UPI001EE5EEA2 (uncharacterized protein LOC124256753 n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE5EEA2) HSP 1 Score: 126 bits (317), Expect = 4.770e-33 Identity = 81/174 (46.55%), Postives = 105/174 (60.34%), Query Frame = 1
Query: 19 RFYHTLEHLADMLEGAERDFKEICQPRLVQLAIFFHDAVYDPKSSSNEEDSEALFRKFSQAARMKP--SDITIVSNYIIATKLHDVSGSDDTDLRAFIDLDMAVLGRERTAYLIYASQQIREEYAHVPTDTYCQKRAQVLRDFLATP-IFATDLYRKELEPAARMNLDAEIAML 531
R YHTL+H+ADM + + V LAIFFHD VYDPKSSSNE+DS +FR F+ A + D TI I AT H G+ DL+ F+D DMAVLGR Y YA +QI+ EY H+ T T+ KRAQVL++FLA IF+T+ + + E AR N+ EI++L
Sbjct: 40 RHYHTLDHIADMFVCYNNWKQRLGNCSAVALAIFFHDIVYDPKSSSNEQDSIQMFRDFAHEAELDAYLRDATI--QLIDATITHVAVGN--RDLKFFLDFDMAVLGRPADGYSDYA-RQIQREYCHLDTATFNSKRAQVLQNFLARDHIFSTEEFTQLYEEKARSNMAREISVL 208
BLAST of mRNA_H-elongata_contig70591.14716.1 vs. uniprot
Match: A0A6U6CET0_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6CET0_9STRA) HSP 1 Score: 128 bits (322), Expect = 4.860e-33 Identity = 89/210 (42.38%), Postives = 119/210 (56.67%), Query Frame = 1
Query: 7 SEQGRFYHTLEHLADMLEG---------AER---------DFKEICQPRLVQLAIFFHDAVYDPKSSSNEEDSEALFRKF-------SQAARMKPSDI-TIVSNYIIATKLHDVSGSDDTD--LRAFIDLDMAVLGRERTAYLIYASQQIREEYAHVPTDTYCQKRAQVLRDFLATPIFATDLYRKELEPAARMNLDAEIAMLCAGAIPS 552
SE GR YHTL HL ++ AER + KE+ V LA+FFHDAVYD KSS+NEEDS AL+R+F + ++M+ +I +++ +YI+ATK H V SD D L AF+D DM+VL + AY YA IR EY HVP + YC+KRA++L F + KELE AR+NL E+ +L G IP+
Sbjct: 75 SEPGRAYHTLVHLEEIFSYLDIILPAAIAERSEQSSIASINTKEVYAA--VSLAVFFHDAVYDAKSSTNEEDSAALYREFQIGKDGVAYHSKMELKNIGSLIVHYILATKSHFVQLSDREDPVLLAFLDADMSVLAKCHEAYDAYAGC-IRYEYQHVPREVYCKKRAEILEGFASKDDLFFGKRMKELEMKARINLTREVELLRKGIIPN 281
BLAST of mRNA_H-elongata_contig70591.14716.1 vs. uniprot
Match: A0A6J8CXA8_MYTCO (Uncharacterized protein n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8CXA8_MYTCO) HSP 1 Score: 130 bits (327), Expect = 2.100e-32 Identity = 73/178 (41.01%), Postives = 104/178 (58.43%), Query Frame = 1
Query: 7 SEQGRFYHTLEHLADMLEGAERDFKEICQPRLVQLAIFFHDAVYDPKSSSNEEDSEALFRKFSQ--AARMKPSDITIVSNYIIATKLHDVSGSDDTDLRAFIDLDMAVLGRERTAYLIYASQQIREEYAHVPTDTYCQKRAQVLRDFLATP-IFATDLYRKELEPAARMNLDAEIAML 531
SE R+YHTL HL DM ++ +P LV LAIFFHD +YDPK + NEE S LF ++++ +K +I+ V ++I+ TK H V D F+D+DMAVLGR+ Y YA Q IREEY H+P Y KR++VL +F +++T + + A+ N+ EIA+L
Sbjct: 281 SESHRYYHTLNHLIDMFHLFNGHKTKMSEPDLVSLAIFFHDIIYDPKKNDNEERSADLFVQYTRECCVNLKEDEISKVKDWILLTKTHQVKDVGSEDYHYFLDIDMAVLGRQEKGYKEYADQ-IREEYKHIPDKEYKTKRSKVLSNFCKRDRLYSTKEFFDNYDNQAKENMAKEIAIL 457
BLAST of mRNA_H-elongata_contig70591.14716.1 vs. uniprot
Match: UPI001425AC27 (uncharacterized protein LOC117106315 n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI001425AC27) HSP 1 Score: 124 bits (310), Expect = 7.280e-32 Identity = 78/186 (41.94%), Postives = 105/186 (56.45%), Query Frame = 1
Query: 7 SEQGRFYHTLEHLADMLEGAERDFKEICQPRLVQLAIFFHDAVYDPKSSSNEEDSEALFRKFSQAARMKPS----DITIVSNYIIATKLHDV------SGSDDTDLRAFIDLDMAVLGRERTAYLIYASQQIREEYAHVPTDTYCQKRAQVLRDFLATP-IFATDLYRKELEPAARMNLDAEIAML 531
SE+ R YHTL H+ M E + +P LV ++FFHD +YDPKSS NEE+S +F +F AA P DIT VSN+I+ T+ H + + D F+D DM VLG Y YA+Q IR EY HV T+ ++R++VL+ FL P I+AT ++R + E AR NL EI L
Sbjct: 40 SEERRHYHTLHHIRKMNEAVSSVASNLKRPDLVYWSVFFHDIIYDPKSSKNEEESAKVFEEF--AAECLPEAPTCDITDVSNWILMTRSHITHIHLTPNKFANEDKYYFLDADMEVLGWANPEYDEYANQ-IRSEYTHVAEKTFRERRSKVLKSFLKLPNIYATKIFRDKYEAQARSNLQREIDRL 222
BLAST of mRNA_H-elongata_contig70591.14716.1 vs. uniprot
Match: A0A1Z5KTL6_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KTL6_FISSO) HSP 1 Score: 123 bits (309), Expect = 1.290e-31 Identity = 81/182 (44.51%), Postives = 105/182 (57.69%), Query Frame = 1
Query: 19 RFYHTLEHLADMLEGAERDFKEIC--QPRLVQLAIFFHDAVYDPKSSSNEEDSEALFRKFSQAARMKPSDITIVSNYIIATKLH---DVSGSDDTDLRAFIDLDMAVLGRERTAYLIYASQQIREEYAHVPTDTYCQKRAQVLRDFLATP-IFATDLYRKELEPAARMNLDAEIAMLCAGAI 546
R YHT HL +ML + Q R V LAIFFHDA+YD S++NEEDS LF+ F A +V + I+ATK H D + D + + F+DLD++VLG+ AY YA I++EY+HVP +TYCQKRA +L FL I+ T L+R+ E AR NL AEI L G I
Sbjct: 58 RHYHTAVHLQEMLLYFHFLRPQFLAEQQRAVILAIFFHDAIYDATSNTNEEDSVTLFQSFETNA--------LVDDMILATKSHHSVDPNMKDTSVIAFFLDLDLSVLGKTEEAYQRYAIL-IQKEYSHVPHETYCQKRADILETFLQQQNIYKTALFREMFEERARSNLAAEIRCLRQGII 230
BLAST of mRNA_H-elongata_contig70591.14716.1 vs. uniprot
Match: A0A8B6EH18_MYTGA (Uncharacterized protein n=2 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6EH18_MYTGA) HSP 1 Score: 122 bits (305), Expect = 1.570e-31 Identity = 65/144 (45.14%), Postives = 87/144 (60.42%), Query Frame = 1
Query: 7 SEQGRFYHTLEHLADMLEGAERDFKEICQPRLVQLAIFFHDAVYDPKSSSNEEDSEALFRKFSQ--AARMKPSDITIVSNYIIATKLHDVSGSDDTDLRAFIDLDMAVLGRERTAYLIYASQQIREEYAHVPTDTYCQKRAQVL 432
SE R+YHTL HL +M + ++ P LV LAIFFHD +YDP S NEE S LF +++ + +K +I+ V ++I+ TK H V+ D F+D+DMAVLGR+ Y YA Q IREEY HVP Y KR++VL
Sbjct: 40 SESHRYYHTLNHLIEMFDHLNGHKTKLSDPDLVSLAIFFHDIIYDPMKSDNEERSAELFVQYTTECSVNLKEEEISKVKDWILLTKTHQVNDEGSEDYHYFLDIDMAVLGRQDKGYKEYADQ-IREEYKHVPEKEYKTKRSKVL 182 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig70591.14716.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig70591.14716.1 >prot_H-elongata_contig70591.14716.1 ID=prot_H-elongata_contig70591.14716.1|Name=mRNA_H-elongata_contig70591.14716.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=193bp RPSEQGRFYHTLEHLADMLEGAERDFKEICQPRLVQLAIFFHDAVYDPKSback to top mRNA from alignment at H-elongata_contig70591:238..1561+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig70591.14716.1 ID=mRNA_H-elongata_contig70591.14716.1|Name=mRNA_H-elongata_contig70591.14716.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1324bp|location=Sequence derived from alignment at H-elongata_contig70591:238..1561+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig70591:238..1561+ >mRNA_H-elongata_contig70591.14716.1 ID=mRNA_H-elongata_contig70591.14716.1|Name=mRNA_H-elongata_contig70591.14716.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1158bp|location=Sequence derived from alignment at H-elongata_contig70591:238..1561+ (Himanthalia elongata Himel1 dioecious)back to top |