mRNA_H-elongata_contig70320.14690.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig70320.14690.1
Unique NamemRNA_H-elongata_contig70320.14690.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig70320.14690.1 vs. uniprot
Match: A0A0N9LKY3_SACJA (Phosphomannomutase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A0N9LKY3_SACJA)

HSP 1 Score: 306 bits (785), Expect = 2.650e-98
Identity = 150/203 (73.89%), Postives = 178/203 (87.68%), Query Frame = 1
Query:    1 STTRARQQFIEARGGKHLRFKKGYKNVIDKAIQLNEEGVDCQLAIETSGHAAFKENMMLDDGAYLALKVLVEIAKQGKGFDLGASIQDLAEPMESTEFRLRVSDSVDTATMFERTLAATQAAVGRLSHWETEKVNFEGLRVVVDEGEGKAGWLLNRMSLHEPIVIFTVESEVDGGVATMAETLLHHVLGPFKEELDLSPLEKA 609
            +T+    +FIEARGGKHLRFKKGYKNVIDKAI+LN+EG+DCQLAIETSGHAAFK+N MLDDGAYLALKVLVE+AK G+GFDLG +IQDLAEP+ESTEFRLRVS++VD ATM+ +TL AT+AAV  +S W++E  NFEGLRV VDEG+G+AGWL+NRMSLHEPIVIF VESEV+GGVA +A  LL HVL P + ELD+S +EK+
Sbjct:  412 TTSNGLARFIEARGGKHLRFKKGYKNVIDKAIELNDEGIDCQLAIETSGHAAFKQNQMLDDGAYLALKVLVEMAKGGQGFDLGETIQDLAEPLESTEFRLRVSNTVDPATMYTKTLEATKAAVAHVSQWKSEDTNFEGLRVAVDEGDGRAGWLMNRMSLHEPIVIFNVESEVEGGVAAIAAGLLKHVLEPLRGELDVSSVEKS 614          
BLAST of mRNA_H-elongata_contig70320.14690.1 vs. uniprot
Match: A0A835Z477_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z477_9STRA)

HSP 1 Score: 231 bits (588), Expect = 1.630e-70
Identity = 119/211 (56.40%), Postives = 150/211 (71.09%), Query Frame = 1
Query:    1 STTRARQQFIEARGGKHLRFKKGYKNVIDKAIQLNEEGVDCQLAIETSGHAAFKENMMLDDGAYLALK---------VLVEIAKQGKGFDLGASIQDLAEPMESTEFRLRVSDSVDTATMFERTLAATQAAVGRLSHWETEKVNFEGLRVVVDEGEGKAGWLLNRMSLHEPIVIFTVESEVDGGVATMAETLLHHVLGPFKEELDLSPLEK 606
            +T+    +FI   GG+HLR+KKGYKNVIDKA  LN  GVDCQLAIETSGH A KEN MLDDGAY+A+K         +LVE+A+QG+G +L   ++ L EP++  EFRLRV    +TAT++++ L A  AA  ++  WE E  NFEGLRV VDEG G+ GW + RMSLH+PIVIF VESEV+ GVA +A+ LL  VL  F++ LDLSPL K
Sbjct:  238 TTSNGLNRFILQSGGQHLRYKKGYKNVIDKAQDLNAAGVDCQLAIETSGHGALKENHMLDDGAYMAMKARTFTLYVGILVELARQGRGKNLSDLMEGLQEPLDEVEFRLRVPAGFETATVYQQALDAFTAAAAKVPAWEVEVPNFEGLRVNVDEGGGRRGWAMARMSLHDPIVIFNVESEVESGVAAIAKQLLSEVLAGFEDRLDLSPLHK 448          
BLAST of mRNA_H-elongata_contig70320.14690.1 vs. uniprot
Match: A0A7S2Y3H0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y3H0_9STRA)

HSP 1 Score: 186 bits (473), Expect = 3.170e-56
Identity = 93/174 (53.45%), Postives = 119/174 (68.39%), Query Frame = 1
Query:    1 STTRARQQFIEARGGKHLRFKKGYKNVIDKAIQLNEEGVDCQLAIETSGHAAFKENMMLDDGAYLALKVLVEIAKQGKGFDLGASIQDLAEPMESTEFRLRVSDSVDTATMFERTLAATQAAVGRLSHWETEKVNFEGLRVVVDEGEGKAGWLLNRMSLHEPIVIFTVESEVDG 522
            +T+   +++IE  GGKH R+ +GYKNVIDK I LNE+GVDC +A+ETSGH AF+EN  LDDGAYLA+K+LVE+A+ GKG  L + + DL EP E++E RL V     T  + E  +   +A       WE EK N+EG RV VDEG GK GW   R SLH+PIVI  +ESEV+G
Sbjct:   47 TTSNGLKRYIENLGGKHCRYMRGYKNVIDKGILLNEQGVDCAVAMETSGHCAFRENRFLDDGAYLAVKLLVEMARLGKGTPLTSLLADLEEPAEASELRLEVRPDYATNEVMEEMVDLVKAITKGNDQWEAEKENYEGHRVCVDEGNGKFGWFSVRQSLHDPIVIINIESEVEG 220          
BLAST of mRNA_H-elongata_contig70320.14690.1 vs. uniprot
Match: M1VAC4_CYAM1 (Phosphoglucomutase n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1VAC4_CYAM1)

HSP 1 Score: 188 bits (478), Expect = 5.210e-53
Identity = 99/207 (47.83%), Postives = 127/207 (61.35%), Query Frame = 1
Query:    4 TTRARQQFIEARGGKHLRFKKGYKNVIDKAIQLNEEGVDCQLAIETSGHAAFKENMMLDDGAYLALKV---LVEIAKQGKGFDLGASIQDLAEPMESTEFRLRV--SDSVDTATMFERTLAATQAAVGRLSHWETEKVNFEGLRVVVDEGEGKAGWLLNRMSLHEPIVIFTVESEVDGGVATMAETLLHHVLGPFKEELDLSPLEKA 609
            T+    +FI  RGG H R++KGYKN+IDK I+LN+ GVDC LAIETSGH A +EN MLDDGAYLA+K+   L+ + +QG    + + +  LAEP+E  EFRL +   +  +T  M          +     +W  EK N+EG RV VDEG G+AGWLL R SLH+P++   VESE  GGV  +A  L       F   LDLSPLEK 
Sbjct:  404 TSNGLAEFIRKRGGHHFRYRKGYKNIIDKGIELNQSGVDCPLAIETSGHGAMRENYMLDDGAYLAVKIVSELINLQRQGDHRGIDSLLDGLAEPLEEKEFRLNLLTENYKETGKMIVEAFHDFVTSAEAPPNWRLEKENYEGWRVAVDEGNGRAGWLLLRQSLHDPLLPLNVESETQGGVKRIARILYDWAAPRFASVLDLSPLEKV 610          
BLAST of mRNA_H-elongata_contig70320.14690.1 vs. uniprot
Match: A0A2V3IKF4_9FLOR (Phosphomannomutase/phosphoglucomutase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKF4_9FLOR)

HSP 1 Score: 186 bits (472), Expect = 2.060e-52
Identity = 96/208 (46.15%), Postives = 132/208 (63.46%), Query Frame = 1
Query:    4 TTRARQQFIEARGGKHLRFKKGYKNVIDKAIQLNEEGVDCQLAIETSGHAAFKENMMLDDGAYLALKVLVEIAK---QGKGFDLGASIQDLAEPMESTEFRLRVSDSVDTATMFERTLAATQAAVGRLSHWETEKVNFEGLRVVVDEGEGKAGWLLNRMSLHEPIVIFTVESEVDGGVATMAETLLHHVLGPFKEELDLSPLEKATNK 618
            T+    +FIE  GGKH R++KGYKNVIDK I+LN+ G+  +LAIETSGH A +EN MLDDGAYLA+K+L+E+ +    G    +G  +  L EP+E  EFRL+  D  D +      + A       ++ W+ E+ N+EG RV V+EG+GKAGWLL R SLH+P++   +ESEV GGVA +A  L+   L P    +D S L++   K
Sbjct:  365 TSNGLARFIEQLGGKHFRYRKGYKNVIDKGIELNQAGIQTELAIETSGHGAMRENYMLDDGAYLAVKILIEMVRLRLDGDSRGIGGLLDGLDEPLEEKEFRLKFLDQADYSNYGANVVEAFAKFASGVTGWKVEETNYEGYRVSVEEGDGKAGWLLLRKSLHDPLLPLNIESEVAGGVAAIARVLVDDFL-PNHSNVDPSTLQQYIQK 571          
BLAST of mRNA_H-elongata_contig70320.14690.1 vs. uniprot
Match: A0A7J7IGN4_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IGN4_9RHOD)

HSP 1 Score: 181 bits (459), Expect = 2.870e-50
Identity = 96/207 (46.38%), Postives = 128/207 (61.84%), Query Frame = 1
Query:    4 TTRARQQFIEARGGKHLRFKKGYKNVIDKAIQLNEEGVDCQLAIETSGHAAFKENMMLDDGAYLALKV---LVEIAKQGKGFDLGASIQDLAEPMESTEFRLRV--SDSVDTATMFERTLAATQAAVGRLSHWETEKVNFEGLRVVVDEGEGKAGWLLNRMSLHEPIVIFTVESEVDGGVATMAETLLHHVLGPFKEELDLSPLEKA 609
            T+    +FI + GG+H R++KGYKN+IDKA +LNE G+DC LAIETSGH A +EN MLDDGAYLA+K+   L+ +  QG    + + I+ L+EP+E  EFRL +   +  +T  M            G    W  E+ N+EG RV V+E +G+AGWLL R SLH+P++   VESE  GGVA +   L       F + LDLSPLEK 
Sbjct:  403 TSNGLAEFIRSHGGRHFRYRKGYKNIIDKACELNESGIDCPLAIETSGHGAMRENYMLDDGAYLAVKIVSELINLRSQGDNNGIVSLIEGLSEPLEEREFRLNLLTENYKETGKMIVDAFHDFVVGSGAPKGWTLERENYEGWRVAVEELDGRAGWLLLRQSLHDPLLPLNVESETLGGVAHICRILYGWAKPRFADVLDLSPLEKV 609          
BLAST of mRNA_H-elongata_contig70320.14690.1 vs. uniprot
Match: R7QAC4_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QAC4_CHOCR)

HSP 1 Score: 179 bits (455), Expect = 3.080e-49
Identity = 94/210 (44.76%), Postives = 131/210 (62.38%), Query Frame = 1
Query:    4 TTRARQQFIEARGGKHLRFKKGYKNVIDKAIQLNEEGVDCQLAIETSGHAAFKENMMLDDGAYLALKVLVEIAKQGKGFDL---GASIQDLAEPMESTEFRLRVSDSVDTATMFERTLAATQAAVGRLSHWETEKVNFEGLRVVVDEGEGKAGWLLNRMSLHEPIVIFTVESEVDGGVATMAETLLHHVLGPFKEELDLSPLEKATNKRQ 624
            T+   ++FIE  GG H R+KKGYKNVIDK I+LN++GV  +LAIETSGH A KEN MLDDGAYLA+K+++E+ +     D+   G  +  L  P+E  EFRL+  D  +      R + A       +  W  E+ N+EG RV VDEG+ KAGWLL R SLH+P++   +ESE +GGVA +A  L++     F   +D S L ++ +K +
Sbjct:  489 TSNGLKRFIENEGGVHFRYKKGYKNVIDKGIELNDQGVQTELAIETSGHGAMKENYMLDDGAYLAVKIIIEMVRLRLAGDMRGIGGLLDGLDAPLEEHEFRLKFIDQENFGEYGGRVVEAFSEFASSVDGWTVEETNYEGFRVSVDEGDDKAGWLLLRQSLHDPLLPLNIESEREGGVAAIARVLVNDFFPSFPN-VDASILAQSASKAE 697          
BLAST of mRNA_H-elongata_contig70320.14690.1 vs. uniprot
Match: A0A2V0PQF0_9CHLO (Phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PQF0_9CHLO)

HSP 1 Score: 176 bits (445), Expect = 2.110e-48
Identity = 95/210 (45.24%), Postives = 128/210 (60.95%), Query Frame = 1
Query:    4 TTRARQQFIEARGGKHLRFKKGYKNVIDKAIQLNEEGVDCQLAIETSGHAAFKENMMLDDGAYLALKVLVEIAK--------QGKGFDLGASIQDLAEPMESTEFRLRVSDSVDT---ATMFERTLAATQAAVGRLSHWETEKVNFEGLRVVVDEGEGKAGWLLNRMSLHEPIVIFTVESEVDGGVATMAETLLHHVLGPFKEELDLSPL 600
            T+     FIE  GG+H RFK+GY+NVI+K I+LNE GVDC+L +ETSGH A +EN  LDDGAY+A+K ++E+ +           G DL A +++L EP E+ E+R+++ D+      A + E   A      G  S W  + VN EG RV VDEG G  GW L R SLH+P+++  VES+V GGVA +   LL   L   K+ LDLS L
Sbjct:  377 TSNGLTSFIEGLGGQHCRFKRGYRNVINKGIELNEAGVDCELMMETSGHGALRENRYLDDGAYMAVKAVIELVRLRMSGCDITNGGCDLTALLRELREPAEAGEYRIKIKDADFKPVGAAVLEGFKAWLDKGAGGESAWSLDPVNHEGWRVSVDEGAGARGWALLRASLHDPLLVLNVESDVPGGVAKIRGHLLESFLSRHKDALDLSAL 586          
BLAST of mRNA_H-elongata_contig70320.14690.1 vs. uniprot
Match: A0A1H9T801_BUTFI (Phosphomannomutase n=6 Tax=Butyrivibrio TaxID=830 RepID=A0A1H9T801_BUTFI)

HSP 1 Score: 173 bits (439), Expect = 5.020e-48
Identity = 99/202 (49.01%), Postives = 129/202 (63.86%), Query Frame = 1
Query:   25 FIEARGGKHLRFKKGYKNVIDKAIQLNEEGVDCQLAIETSGHAAFKENMMLDDGAYLALKVLVEIAKQGKGFDLGASIQDLAEPMESTEFRLRV-SDSVDTATMF---ERTLAATQAAVGRLSHWETEKVNFEGLRVVVDEGEGKAGWLLNRMSLHEPIVIFTVESEVDGGVATMAETLLHHVLGPFKEELDLSPLEKATNK 618
            FIEA GGKH RFK+GY+NVID++I+LN EG+D QLAIETSGH AFKEN  LDDGAYL +K+L+E+   GKG  L   I+DL+EP ES E R  V +D ++   +    +R L   + A G++  W   + N+EG+RV  D+  G  GWLL R SLHEPI+   +ES   GG   MA  L   + G  ++ LD SPL+    K
Sbjct:  319 FIEAHGGKHKRFKRGYRNVIDESIRLNNEGIDSQLAIETSGHGAFKENYFLDDGAYLMVKLLIEM---GKGKKLEEMIKDLSEPCESDEIRFPVYADKIEGGDLQLNGDRILKMLEEAAGKVEGWSLPESNYEGVRVNTDKDHGD-GWLLLRKSLHEPIMPLNIESNTKGGNLIMATKLKEILAG--EDTLDQSPLDAFIGK 514          
BLAST of mRNA_H-elongata_contig70320.14690.1 vs. uniprot
Match: A0A7S2ZXM3_9RHOD (Hypothetical protein n=4 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZXM3_9RHOD)

HSP 1 Score: 174 bits (442), Expect = 6.770e-48
Identity = 100/209 (47.85%), Postives = 130/209 (62.20%), Query Frame = 1
Query:    4 TTRARQQFIEARGGKHLRFKKGYKNVIDKAIQLNEEGVDCQLAIETSGHAAFKENMMLDDGAYLALKVLVE---IAKQGKGFDLGASIQDLAEPMESTEFRLRVSDSVDTATMFERTLAATQAAVGR-LSHWETEKVNFEGLRVVVDEGEGKAGWLLNRMSLHEPIVIFTVESEVDGGVATMAETLLHHVLGPFKE---ELDLSPLEKA 609
            T+     FIE++GG H RFK+GYKNVID+ I+LN +G D QL+IETSGH A KEN MLDDGAYLA+K+++E   I ++ K   +    + L EP E+ E+R++   +      +   L A  A  G+ +S WE EKVN+EG R  V E  GKAGW L R SLH+P++   VESEV+GGV  +  TL      PF E   ELDLS L  A
Sbjct:  395 TSNGLSAFIESKGGVHFRFKRGYKNVIDQGIELNIKGQDSQLSIETSGHGAMKENYMLDDGAYLAVKIIIELVRIKRRNKEQGVEVLYEGLGEPKEAVEYRIKFKSADFDFKSYGSKLLADLAEFGKGVSEWELEKVNYEGFRFSVAEEGGKAGWFLLRQSLHDPLLPLNVESEVEGGVQAIVSTLK-----PFLERYSELDLSVLPDA 598          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig70320.14690.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0N9LKY3_SACJA2.650e-9873.89Phosphomannomutase n=1 Tax=Saccharina japonica Tax... [more]
A0A835Z477_9STRA1.630e-7056.40Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2Y3H0_9STRA3.170e-5653.45Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
M1VAC4_CYAM15.210e-5347.83Phosphoglucomutase n=1 Tax=Cyanidioschyzon merolae... [more]
A0A2V3IKF4_9FLOR2.060e-5246.15Phosphomannomutase/phosphoglucomutase n=1 Tax=Grac... [more]
A0A7J7IGN4_9RHOD2.870e-5046.38Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
R7QAC4_CHOCR3.080e-4944.76Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V0PQF0_9CHLO2.110e-4845.24Phosphoglucomutase (alpha-D-glucose-1,6-bisphospha... [more]
A0A1H9T801_BUTFI5.020e-4849.01Phosphomannomutase n=6 Tax=Butyrivibrio TaxID=830 ... [more]
A0A7S2ZXM3_9RHOD6.770e-4847.85Hypothetical protein n=4 Tax=Rhodosorus marinus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig70320contigH-elongata_contig70320:882..3166 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score189.1
Seed ortholog evalue2.1e-45
Seed eggNOG ortholog45157.CMC121CT
GOsGO:0003674,GO:0003824,GO:0004615,GO:0005975,GO:0008150,GO:0008152,GO:0016853,GO:0016866,GO:0016868,GO:0044238,GO:0071704
EggNOG free text desc.alginic acid metabolic process
EggNOG OGsCOG1109@1,KOG1220@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionPhosphomannomutase/phosphoglucomutase
Ec32 orthologEc-17_001480.1
Exons6
Model size627
Cds size627
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig70320.14690.1prot_H-elongata_contig70320.14690.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig70320 882..3166 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931101.376137-CDS-H-elongata_contig70320:881..9981622931101.376137-CDS-H-elongata_contig70320:881..998Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig70320 882..998 -
1691679698.4585645-CDS-H-elongata_contig70320:881..9981691679698.4585645-CDS-H-elongata_contig70320:881..998Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig70320 882..998 -
1622931101.3933969-CDS-H-elongata_contig70320:1468..16181622931101.3933969-CDS-H-elongata_contig70320:1468..1618Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig70320 1469..1618 -
1691679698.4695332-CDS-H-elongata_contig70320:1468..16181691679698.4695332-CDS-H-elongata_contig70320:1468..1618Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig70320 1469..1618 -
1622931101.408737-CDS-H-elongata_contig70320:1971..20581622931101.408737-CDS-H-elongata_contig70320:1971..2058Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig70320 1972..2058 -
1691679698.480037-CDS-H-elongata_contig70320:1971..20581691679698.480037-CDS-H-elongata_contig70320:1971..2058Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig70320 1972..2058 -
1622931101.4208195-CDS-H-elongata_contig70320:2511..25801622931101.4208195-CDS-H-elongata_contig70320:2511..2580Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig70320 2512..2580 -
1691679698.4889822-CDS-H-elongata_contig70320:2511..25801691679698.4889822-CDS-H-elongata_contig70320:2511..2580Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig70320 2512..2580 -
1622931101.434371-CDS-H-elongata_contig70320:2773..28661622931101.434371-CDS-H-elongata_contig70320:2773..2866Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig70320 2774..2866 -
1691679698.5009449-CDS-H-elongata_contig70320:2773..28661691679698.5009449-CDS-H-elongata_contig70320:2773..2866Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig70320 2774..2866 -
1622931101.4473886-CDS-H-elongata_contig70320:3055..31661622931101.4473886-CDS-H-elongata_contig70320:3055..3166Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig70320 3056..3166 -
1691679698.5093877-CDS-H-elongata_contig70320:3055..31661691679698.5093877-CDS-H-elongata_contig70320:3055..3166Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig70320 3056..3166 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig70320.14690.1

>prot_H-elongata_contig70320.14690.1 ID=prot_H-elongata_contig70320.14690.1|Name=mRNA_H-elongata_contig70320.14690.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=209bp
STTRARQQFIEARGGKHLRFKKGYKNVIDKAIQLNEEGVDCQLAIETSGH
AAFKENMMLDDGAYLALKVLVEIAKQGKGFDLGASIQDLAEPMESTEFRL
RVSDSVDTATMFERTLAATQAAVGRLSHWETEKVNFEGLRVVVDEGEGKA
GWLLNRMSLHEPIVIFTVESEVDGGVATMAETLLHHVLGPFKEELDLSPL
EKATNKRQ*
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mRNA from alignment at H-elongata_contig70320:882..3166-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig70320.14690.1 ID=mRNA_H-elongata_contig70320.14690.1|Name=mRNA_H-elongata_contig70320.14690.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2285bp|location=Sequence derived from alignment at H-elongata_contig70320:882..3166- (Himanthalia elongata Himel1 dioecious)
TCCACCACCCGTGCGAGGCAGCAATTCATCGAGGCGCGCGGGGGAAAACA CCTTCGGTTCAAGAAAGGCTACAAGAACGTTATCGATAAGGCCATTCAAC TTAACGAAGAGGTGACGACGTTCGATCTAGGTTGCCGCTAAGGAAGGTCG TTGGAATGGTAAGATTATTTCAAGCGCGTGCTGCACAAGGGTGAGCCGTG TGTTGTCATCATCCTTTTGGAACACTGCCCGATGATGGTTGTGCCCTGTT CCGCCAATTGCCAATTGCCAATTCTACCGCGTTTCCTTAAATTATACCAG GGTGTCGACTGCCAACTGGCCATCGAAACTTCAGGGCATGCCGCTTTCAA GGAAAATATGATGCTTGATGACGGAGCGTATCTCGCGCTCAAGGTGAACC GTCTGGGTCGCACTGATCTCTGGCGTTTTGATTGGGATCCGCACTGACCC TCCTTGCCAGCGGGTGGAGGGCACATACTGGTCAAGCACAAGCTCGCGTT GGTTCGAGTGTTTCGGTGTGCATCGGGATCGGTTTTTGGTAACCCGCCGC CAAGTGATTTTCGGTATCTCCTTCTCAAAAATATAGGTGCTGGTGGAGAT CGCGAAGCAGGGAAAGGGGTTCGATCTCGGCGCCTCGATCCAAGATCTTG CTGAGGTGGGCACGCCTTCTGACGTAGCTGTCTCGTAAGGGAAGGGAAGG GAAAGAAAGGGAATACATCGTAACACACTTGAGATGATGAGAAAGGGAAA TAATGGGGCCGGGTGTGACACGTCTCAGGACTTCATCATGAAATCGTGTA TTCGGCAACTAAAACTTCTCGTATTCGTCGACAGCGTGAAAAAAGTCATC GAGGTCGACCAATACTTGTAAGAGTCTGAAAAATAACGTGGACGATCGAC ATACGCTTTGTTGGAGCAACCGCTGCACTGCGCAGGATTGCACGGAATTA CCACACGATTTTACCACGTTCGATAATTTCTCGTCTCTTACAGTATGATG ACTCGTCACAATTATAACTCAGGATTATTTCCTGCTACTAAAGAGGTTTC AGTTCTTGCAAACCGTACGTGCTCGCTCCCCGCGCTTTCCGTGTTTCCCA CACTTCAGCCAATGGAATCGACCGAATTTCGCCTTCGAGTGTCGGACTCC GTCGATACTGCGACCATGTTTGAACGAACGCTCGCGGCGACACAGGTAGA GCGCATGAAACGGCGACTCAAAGACGTTTCATGGCCCTGTCACTTAGCGC CCTCGGCCAAGATGTCTTTGTAAAATGCGGTACCAGACACAAAAAGCGCG TCTTATTTTATAATTTGCCCTCCTGTGATGAGACGTCGGCATCGGCAATT ATCAATTATCGCGTTTCTGTTGTTGTTATGATGAGGTAGCGAAGGGCACG GCCTCGTTCGGCGTTGAGCCTTCAAAATTAATTAGTTAGCAGTAACATTT GTTTTCCTACACCAAGAGTGATTCCAGCCGTGACATGCTCACGAGGCGCT TGAGACGCTGCCCCGGCTTCTGCGGTTTTGGTTCGTACCGTTGGTCAGGC GGCTGTTGGGCGATTGAGCCACTGGGAGACGGAGAAGGTGAATTTCGAGG GGCTACGGGTCGTCGTGGATGAAGGCGAAGGCAAAGCGGGCTGGTTGCTC AACCGCATGTCACTGCACGAGCCCATCGTGATATTTACGGTGGAGTCGGT GAGGTGTTCATTACTTCACCGCTGCCGCAGGAACTGTCTCAGCTATGAGT GAAAGGCAATGCTTGTTCCGACGAAGGCCGGAAGGGGTACAAGAAAATAC ATGTCAATGCGAGCTTCGCCCGTCGGACCCTGGAGGCAATCAGTTGTGGT GTGGATCATCTCGATGCGCTGGAAGTCAGTCGAGCACCCAACCCTTTACT GTTTTATTGTTCGCCGTCCGAAGCATCTCGAACGTGTATCGTTCTCACAA CTCAAGGGACTGAAAACCCTCTACCCTCCCTCGACATCGGCTTCATTTGA CCATTTAACCATTTGGTAATAGTGAGCTTGTTTGCCTTCACGGCTACCAT AACTGTTATAGAGTATAATAGAGTATAGGCTACAGCATAGACTACAGCAC AAGGACGCTTGAACATAAACAAACATCGGTCCTGCCTTCCTTCCCCATGC GACGCGTTTGTTTCGCAGGAGGTAGATGGCGGCGTGGCCACAATGGCGGA GACACTTTTGCACCACGTACTGGGGCCGTTCAAGGAAGAACTCGATCTCT CTCCGCTCGAAAAGGCGACAAACAAACGACAATAA
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Coding sequence (CDS) from alignment at H-elongata_contig70320:882..3166-

>mRNA_H-elongata_contig70320.14690.1 ID=mRNA_H-elongata_contig70320.14690.1|Name=mRNA_H-elongata_contig70320.14690.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1254bp|location=Sequence derived from alignment at H-elongata_contig70320:882..3166- (Himanthalia elongata Himel1 dioecious)
TCCACCACCCGTGCGAGGCAGCAATTCATCGAGGCGCGCGGGGGAAAACA
CCTTCGGTTCAAGAAAGGCTACAAGAACGTTATCGATAAGGCCATTCAAC
TTAACGAAGAGTCCACCACCCGTGCGAGGCAGCAATTCATCGAGGCGCGC
GGGGGAAAACACCTTCGGTTCAAGAAAGGCTACAAGAACGTTATCGATAA
GGCCATTCAACTTAACGAAGAGGGTGTCGACTGCCAACTGGCCATCGAAA
CTTCAGGGCATGCCGCTTTCAAGGAAAATATGATGCTTGATGACGGAGCG
TATCTCGCGCTCAAGGGTGTCGACTGCCAACTGGCCATCGAAACTTCAGG
GCATGCCGCTTTCAAGGAAAATATGATGCTTGATGACGGAGCGTATCTCG
CGCTCAAGGTGCTGGTGGAGATCGCGAAGCAGGGAAAGGGGTTCGATCTC
GGCGCCTCGATCCAAGATCTTGCTGAGGTGCTGGTGGAGATCGCGAAGCA
GGGAAAGGGGTTCGATCTCGGCGCCTCGATCCAAGATCTTGCTGAGCCAA
TGGAATCGACCGAATTTCGCCTTCGAGTGTCGGACTCCGTCGATACTGCG
ACCATGTTTGAACGAACGCTCGCGGCGACACAGCCAATGGAATCGACCGA
ATTTCGCCTTCGAGTGTCGGACTCCGTCGATACTGCGACCATGTTTGAAC
GAACGCTCGCGGCGACACAGGCGGCTGTTGGGCGATTGAGCCACTGGGAG
ACGGAGAAGGTGAATTTCGAGGGGCTACGGGTCGTCGTGGATGAAGGCGA
AGGCAAAGCGGGCTGGTTGCTCAACCGCATGTCACTGCACGAGCCCATCG
TGATATTTACGGTGGAGTCGGCGGCTGTTGGGCGATTGAGCCACTGGGAG
ACGGAGAAGGTGAATTTCGAGGGGCTACGGGTCGTCGTGGATGAAGGCGA
AGGCAAAGCGGGCTGGTTGCTCAACCGCATGTCACTGCACGAGCCCATCG
TGATATTTACGGTGGAGTCGGAGGTAGATGGCGGCGTGGCCACAATGGCG
GAGACACTTTTGCACCACGTACTGGGGCCGTTCAAGGAAGAACTCGATCT
CTCTCCGCTCGAAAAGGCGACAAACAAACGACAATAAGAGGTAGATGGCG
GCGTGGCCACAATGGCGGAGACACTTTTGCACCACGTACTGGGGCCGTTC
AAGGAAGAACTCGATCTCTCTCCGCTCGAAAAGGCGACAAACAAACGACA
ATAA
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