mRNA_H-elongata_contig70278.14684.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig70278.14684.1 vs. uniprot
Match: D8LIX8_ECTSI (Putative Glutathione S-transferase putative Glutathione S-transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIX8_ECTSI) HSP 1 Score: 373 bits (957), Expect = 1.030e-127 Identity = 180/232 (77.59%), Postives = 202/232 (87.07%), Query Frame = 1
Query: 4 TSLAASFNPFDGLGKSVGNMFSGATGSVPDDFEDKAPSWESLETLLQERQTKEEKDEGVLRGRGYGPTSALAGLRLFDAPEGTEPRVTLYRDHAAWCPYCEKVWLQLEEKRIPYKVEKVPMRCYGDKPSWFRQISPSGAIPVAQIDGRIISESNVIMQVLEATFPDNNPLLPAATSPLAVRVDPLLRLEREIFSAWFRWLTSSGTNSASFVAAADKVNEALGEGGGPYFLGE 699
++LAASFNPF GLGKSV +M +GATGSVP DFEDKAPSWE LE +L+ERQT EE++ LR RGYGPTSALA LRLFDAPEGTEPRVTLYRDHA WCPYCEKVWL LEEKRIPY+V+KVPMRCYGDKP WF ++SPSGA+PVA+IDGRIISESNVIMQVLEATF +NNPLLPA SP A R + LL LEREIFSAWFRW+TSS SA+F A+ADKV +AL +GGGPYFLG+
Sbjct: 60 STLAASFNPFAGLGKSVNSMLAGATGSVPADFEDKAPSWERLEAMLEERQTPEEREAVALRERGYGPTSALANLRLFDAPEGTEPRVTLYRDHAGWCPYCEKVWLLLEEKRIPYRVKKVPMRCYGDKPRWFSEVSPSGAVPVAEIDGRIISESNVIMQVLEATFTENNPLLPAPGSPQAGRAESLLGLEREIFSAWFRWITSSNPTSAAFEASADKVEKALKDGGGPYFLGK 291
BLAST of mRNA_H-elongata_contig70278.14684.1 vs. uniprot
Match: A0A6U2EXV2_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U2EXV2_HEMAN) HSP 1 Score: 256 bits (653), Expect = 4.580e-79 Identity = 126/194 (64.95%), Postives = 147/194 (75.77%), Query Frame = 1
Query: 103 DKAPSWESLETLLQERQTKEEKDEGVLRGRGYGPTSALAGLRLFDAPEGTEPRVTLYRDHAAWCPYCEKVWLQLEEKRIPYKVEKVPMRCYGDKPSWFRQISPSGAIPVAQIDGRIISESNVIMQVLEATFPDNNPLLPAATSPLAVRVDPLLRLEREIFSAWFRWLTSS----GTNSASFVAAADKVNEALGE 672
DKAPSW L+T+L+++QT+EE+D G T +LA LR+FDAP+GTEPRVTLYRD AAWCPYCEKVWLQLEEKRIPYKVEKV MRCYGDKP WF ++ PSG IPVA+IDGR+I+ESN IMQ LE TFPD+NPL P A+ P A RV LLRLEREIFSAWFRWL SS +F D+V+ L +
Sbjct: 100 DKAPSWTDLKTMLEKQQTQEERDFRSQLASGRSKTHSLATLRMFDAPDGTEPRVTLYRDVAAWCPYCEKVWLQLEEKRIPYKVEKVNMRCYGDKPDWFMRMQPSGGIPVAKIDGRVITESNDIMQALEDTFPDHNPLTPDASDPQAPRVRGLLRLEREIFSAWFRWLVSSTRAGDAQQKNFEGLMDRVDAELAQ 293
BLAST of mRNA_H-elongata_contig70278.14684.1 vs. uniprot
Match: A0A4D9D8Z5_9STRA (GST N-terminal domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D8Z5_9STRA) HSP 1 Score: 252 bits (643), Expect = 8.690e-78 Identity = 133/239 (55.65%), Postives = 159/239 (66.53%), Query Frame = 1
Query: 10 LAASFNPFDGLGKSVGNMFSGAT-GSVP-----DDFEDKAPSWESLETLLQERQTKEEKDEGVLRGRGYGPTSALAGLRLFDAPEGTEPRVTLYRDHAAWCPYCEKVWLQLEEKRIPYKVEKVPMRCYGDKPSWFRQISPSGAIPVAQIDGRIISESNVIMQVLEATFPDNNPLLPAATSPLAVRVDPLLRLEREIFSAWFRWLT-SSGTNSAS---FVAAADKVNEALGEGGGPYFLG 696
L S LG M SG GS P DF+D APSW L+ L +RQT EE+ LR G GP S+ A +RLFDAP+G EPRVTLYRD AAWCPYCEKVW+ LEEKRIPY+V+KVPMRCYG KP+WF ++S +G +PV ++DG ++ ES+VI+Q LE FP+ PLLP A+ P A V PLLRLERE+FS W RWLT S+ TN S F +V AL E GGPYFLG
Sbjct: 47 LKPSLTRHSSLGGMFTQMLSGMVKGSAPPPAGMSDFKDPAPSWADLKASLSQRQTPEERGLPDLRAAGRGPPSSKAEIRLFDAPDGYEPRVTLYRDTAAWCPYCEKVWMYLEEKRIPYRVKKVPMRCYGQKPAWFSRLSATGLLPVMELDGDVVIESDVIIQTLEDKFPEAVPLLPLASDPDAAAVGPLLRLERELFSGWLRWLTGSTSTNERSKMVFEGVLGRVEAALRERGGPYFLG 285
BLAST of mRNA_H-elongata_contig70278.14684.1 vs. uniprot
Match: A0A7S0M898_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0M898_9CRYP) HSP 1 Score: 236 bits (603), Expect = 7.770e-73 Identity = 131/244 (53.69%), Postives = 157/244 (64.34%), Query Frame = 1
Query: 40 LGKSVGNMFSGATGSV-------PDD----FEDKAPSWESLETLLQERQTKEEKDEGVLRGRGYGPTSALAGLRLFDAPEGTEPRVTLYRDHAAWCPYCEKVWLQLEEKRIPYKVEKVPMRCYGDKPSWFRQISPSGAIPVAQIDGRIISESNVIMQVLEATFPDNNPLLPAATSPLAVRVDPLLRLEREIFSAWFRWL-TSSGTNSA------SFVAAADK-------VNEALGEGGGPYFLG 696
LG +G + S G + PDD ED APSW L+++L++ QT+EE+ G G +A+A +RLF AP+GTEPRV LYRD+AAWCPYCEKVW+ LEEK+IPYKVEKV MRCYGDKP WF +ISP G IPVA+IDGR+ISESN IMQ LE FP +LPAA P RV PLLRLER+IFSAWFRWL T S A S + D+ + A G G G +FLG
Sbjct: 61 LGGIIGGLTSVLRGGMKSAPNTNPDDPSARSEDTAPSWGELKSMLEDSQTEEERRFRSELAAGRGNANAMASIRLFGAPDGTEPRVLLYRDYAAWCPYCEKVWIMLEEKKIPYKVEKVNMRCYGDKPDWFMRISPGGGIPVAKIDGRVISESNDIMQALEDDFPSYRAMLPAAGDPHGPRVAPLLRLERQIFSAWFRWLVTPSREGDAMQLGFESLLTQVDRELQQARDMAAAAGAGPGGFFLG 304
BLAST of mRNA_H-elongata_contig70278.14684.1 vs. uniprot
Match: A0A7S0I190_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0I190_9CRYP) HSP 1 Score: 224 bits (570), Expect = 2.060e-70 Identity = 113/197 (57.36%), Postives = 137/197 (69.54%), Query Frame = 1
Query: 151 QTKEEKDEGVLRGRGYGPTSALAGLRLFDAPEGTEPRVTLYRDHAAWCPYCEKVWLQLEEKRIPYKVEKVPMRCYGDKPSWFRQISPSGAIPVAQIDGRIISESNVIMQVLEATFPDNNPLLPAATSPLAVRVDPLLRLEREIFSAWFRWLTSSGTNSAS----FVAAADKVNEALGEGG----------GPYFLGE 699
QT+EE+ G GPT+ A +RLFDAP+GTEPRV LYRD AAWCPYCEKVWL LEEKR+PY+VEKV MRCYGDKP WF ++ PSG IPVA++DGR+I+ESN IMQ LE FP N P+LPA++ P A RV LLRLER+IFS+WFRWL S + S F A +V++ L E G +FLG+
Sbjct: 13 QTQEERSWSSTVASGRGPTNHQASIRLFDAPDGTEPRVILYRDKAAWCPYCEKVWLHLEEKRVPYRVEKVNMRCYGDKPDWFMRMQPSGGIPVAKVDGRVITESNDIMQALEDVFPQN-PMLPASSDPQAPRVGKLLRLERQIFSSWFRWLVSPSRSGDSQQINFEALLSEVDQQLKEANDIAVANGHQEGRFFLGD 208
BLAST of mRNA_H-elongata_contig70278.14684.1 vs. uniprot
Match: A0A6U6AAK3_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A6U6AAK3_GUITH) HSP 1 Score: 230 bits (587), Expect = 4.000e-69 Identity = 123/241 (51.04%), Postives = 155/241 (64.32%), Query Frame = 1
Query: 31 FDGLGKSVGNMFSGATGSVPDD----FEDKAPSWESLETLLQERQTKEEKDEGVLRGRGYGPTSALAGLRLFDAPEGTEPRVTLYRDHAAWCPYCEKVWLQLEEKRIPYKVEKVPMRCYGDKPSWFRQISPSGAIPVAQIDGRIISESNVIMQVLEATFPDNNPLLPAATSPLAVRVDPLLRLEREIFSAWFRWLTSSG----TNSASFVAAADKVNEALGEGG----------GPYFLGE 699
F GL + + G S DD ++D+APSWE L+ L QT EE+ + G GP + A +RLF+A + TEPRV LYRD AAWCPYCEKVWL LEEKR+PY+VEKV MRCYGDKP WF ++ PSG IPVA+IDG++I+ESN IMQ LE FP N P+LPA++ P A RV LLRLER+IFS+WFRWL S + +F + +V+E L E G +FLG+
Sbjct: 89 FGGLVEGMDKFLRGGGESSSDDPNSPWKDQAPSWEDLQQKLASLQTAEERSWPSVVASGRGPANHQASVRLFEASDDTEPRVILYRDKAAWCPYCEKVWLHLEEKRVPYRVEKVNMRCYGDKPDWFMRMQPSGGIPVAKIDGQVITESNDIMQTLEDVFPQN-PMLPASSDPQAPRVGKLLRLERQIFSSWFRWLVSPSRFGDSQQINFESLLSQVDEELKEANDIAVANGHKEGRFFLGD 328
BLAST of mRNA_H-elongata_contig70278.14684.1 vs. uniprot
Match: A0A7S4B4Q9_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B4Q9_CHRCT) HSP 1 Score: 222 bits (566), Expect = 1.520e-68 Identity = 119/233 (51.07%), Postives = 151/233 (64.81%), Query Frame = 1
Query: 16 ASFNPFDGLGKSVGNMFS-GATGSVPDDFEDKAPSWESLETLLQERQTKEEKDEGVLRGRGYGP-TSALAGLRLFDAPEGTEPRVTLYRDHAAWCPYCEKVWLQLEEKRIPYKVEKVPMRCYGDKPSWFRQISPSGAIPVAQIDGRIISESNVIMQVLEATFPDNNPLLPAATSPLAVRVDPLLRLEREIFSAWFRWLTSS---GTNSASFVAAADKVNEALGEGGGPYFLGE 699
A P GLG NM G+T S +D+APSW++L LL ++ + +E+ G P SALA +RLF E R+TLYRD AAWCPYCEKVWL LEEK++PY VEKV M CYGDKP+WF + PSG IPVA++DG++I ESN IM +E +P+ P+LP S AV V PLL LER++FS+WFRWLTS G +F+A D+V+ AL GGP+FLGE
Sbjct: 18 AMVKPGGGLGGMFQNMVKLGSTASSAAVVQDRAPSWDTLTALLHDQSSADERSFRQQLHDGTLPHASALAKMRLFGKSEADASRITLYRDTAAWCPYCEKVWLLLEEKQVPYMVEKVNMNCYGDKPAWFWAMQPSGGIPVAKVDGKVIRESNDIMMAIEQAYPER-PMLPREDSAKAVAVRPLLTLERQLFSSWFRWLTSGMNDGAQRHNFLALMDEVDAALAAQGGPFFLGE 249
BLAST of mRNA_H-elongata_contig70278.14684.1 vs. uniprot
Match: A0A7S4EUZ7_CHRCT (Hypothetical protein n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4EUZ7_CHRCT) HSP 1 Score: 222 bits (566), Expect = 1.070e-66 Identity = 119/233 (51.07%), Postives = 151/233 (64.81%), Query Frame = 1
Query: 16 ASFNPFDGLGKSVGNMFS-GATGSVPDDFEDKAPSWESLETLLQERQTKEEKDEGVLRGRGYGP-TSALAGLRLFDAPEGTEPRVTLYRDHAAWCPYCEKVWLQLEEKRIPYKVEKVPMRCYGDKPSWFRQISPSGAIPVAQIDGRIISESNVIMQVLEATFPDNNPLLPAATSPLAVRVDPLLRLEREIFSAWFRWLTSS---GTNSASFVAAADKVNEALGEGGGPYFLGE 699
A P GLG NM G+T S +D+APSW++L LL ++ + +E+ G P SALA +RLF E R+TLYRD AAWCPYCEKVWL LEEK++PY VEKV M CYGDKP+WF + PSG IPVA++DG++I ESN IM +E +P+ P+LP S AV V PLL LER++FS+WFRWLTS G +F+A D+V+ AL GGP+FLGE
Sbjct: 18 AMVKPGGGLGGMFQNMVKLGSTASSAAVVQDRAPSWDTLTALLHDQSSADERSFRQQLHDGTLPHASALAKMRLFGKSEADASRITLYRDTAAWCPYCEKVWLLLEEKQVPYMVEKVNMNCYGDKPAWFWAMQPSGGIPVAKVDGKVIRESNDIMMAIEQAYPER-PMLPREDSAKAVAVRPLLTLERQLFSSWFRWLTSGMNDGAQRHNFLALMDEVDAALAAQGGPFFLGE 249
BLAST of mRNA_H-elongata_contig70278.14684.1 vs. uniprot
Match: A0A0G4EGA8_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EGA8_VITBC) HSP 1 Score: 222 bits (566), Expect = 1.680e-66 Identity = 116/219 (52.97%), Postives = 148/219 (67.58%), Query Frame = 1
Query: 61 MFSGATGSVPDDFEDKAPSWESLETLLQERQTKEEKDEGVLRGRGYGP-TSALAGLRLFDAP-EGTEPRVTLYRDHAAWCPYCEKVWLQLEEKRIPYKVEKVPMRCYGDKPSWFRQISPSGAIPVAQIDGRIISESNVIMQVLEATFPDNNPLLPAATSPLAVRVDPLLRLEREIFSAWFRWLTSSGTNS---ASFVAAADKVNEALGE-GGGPYFLGE 699
+F + + P D+APSW L ++L T+EE+ +R +G GP + A +RLFD+ E RVTLYRD AAWCPYCEKVWLQLEEK+IPY+VEKVP+RCYG KP WF I P G +PV +IDG++I+ESN IMQ +E FPD+ PLLP + + V PLLRLER++FSAW WLTSSG + A FV D V++AL + GPYFLG+
Sbjct: 53 LFGKSAPNAPTLQNDRAPSWAELSSML----TQEERAFNAMRDQGRGPYPTPWASIRLFDSTDEKAADRVTLYRDSAAWCPYCEKVWLQLEEKQIPYRVEKVPLRCYGAKPRWFLDICPGGMLPVCKIDGQVITESNDIMQAIEERFPDHKPLLPKPGTEKSSAVGPLLRLERQLFSAWLGWLTSSGPSDRMKAQFVQTMDSVDKALDQFDDGPYFLGD 267
BLAST of mRNA_H-elongata_contig70278.14684.1 vs. uniprot
Match: A0A8J5XKW8_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XKW8_DIALT) HSP 1 Score: 217 bits (553), Expect = 1.440e-64 Identity = 113/198 (57.07%), Postives = 132/198 (66.67%), Query Frame = 1
Query: 103 DKAPSWESLETLLQERQTKEEKDEGVLRGRGYGPTSALAGLRLFDAPEGTEPRVTLYRDHAAWCPYCEKVWLQLEEKRIPYKVEKVPMRCYGDKPSWFRQISPSGAIPVAQIDGRIISESNVIMQVLEATFPDNNPLLPAATSPLAVRVDPLLRLEREIFSAWFRWLTSSGTNSASFVAAADKVNEALGEGGGPYFLG 696
D APSW+ L L + + + E + G G + + +RLFDAPEGTEPRV L+RD AAWCPYC+KVW LE KRIPYKV KVPM CYGDKP+ FR+ISPSGAIPVA IDGRII ESN IM LE FP P+LP A S A R L+ LER +FSAWF WL S+ S F AA ++V L GGP+FLG
Sbjct: 61 DAAPSWDELRVLSAKAGGERFRAEWDAQAVGRGAANHQSSIRLFDAPEGTEPRVELFRDTAAWCPYCQKVWCLLEAKRIPYKVSKVPMSCYGDKPAAFRRISPSGAIPVAIIDGRIIPESNDIMYALEEIFPQT-PMLPPAGSAEAARARELMALERTLFSAWFGWLRSAQDGSGRFEAAMERVCAELQRSGGPFFLG 257 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig70278.14684.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig70278.14684.1 >prot_H-elongata_contig70278.14684.1 ID=prot_H-elongata_contig70278.14684.1|Name=mRNA_H-elongata_contig70278.14684.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=233bp KTSLAASFNPFDGLGKSVGNMFSGATGSVPDDFEDKAPSWESLETLLQERback to top mRNA from alignment at H-elongata_contig70278:657..2764+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig70278.14684.1 ID=mRNA_H-elongata_contig70278.14684.1|Name=mRNA_H-elongata_contig70278.14684.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2108bp|location=Sequence derived from alignment at H-elongata_contig70278:657..2764+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig70278:657..2764+ >mRNA_H-elongata_contig70278.14684.1 ID=mRNA_H-elongata_contig70278.14684.1|Name=mRNA_H-elongata_contig70278.14684.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1398bp|location=Sequence derived from alignment at H-elongata_contig70278:657..2764+ (Himanthalia elongata Himel1 dioecious)back to top |