mRNA_H-elongata_contig7003.14657.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig7003.14657.1
Unique NamemRNA_H-elongata_contig7003.14657.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig7003.14657.1 vs. uniprot
Match: D8LQ20_ECTSI (Proteasome subunit alpha type n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ20_ECTSI)

HSP 1 Score: 342 bits (877), Expect = 7.660e-118
Identity = 165/170 (97.06%), Postives = 169/170 (99.41%), Query Frame = 1 
Query:    1 MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGILAKDGIVMAAERKVVSKLLAPSKTSEKTYRLYENASCVVAGLTADANLLINHARVSAQRYLYKYGEDMPLEQLVKEVCNYKQAYTQFGGLRPFGVSFLFTGWDQHHGFQLYHSDPSGNYGGWKATAIGANNQA 510
            MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGILAKDGI+MAAERKVVSKLLAPSKTSEKTYRLYENASCVVAGLTADANLL+NHARVSAQRYLY+YGE MPLEQLVKEVCNYKQAYTQFGGLRPFGVSFLFTGWD+HHGFQLYHSDPSGNYGGWKATAIGANNQA
Sbjct:    1 MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGILAKDGIIMAAERKVVSKLLAPSKTSEKTYRLYENASCVVAGLTADANLLVNHARVSAQRYLYQYGEQMPLEQLVKEVCNYKQAYTQFGGLRPFGVSFLFTGWDEHHGFQLYHSDPSGNYGGWKATAIGANNQA 170
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BLAST of mRNA_H-elongata_contig7003.14657.1 vs. uniprot
Match: A0A7S2XZ80_9STRA (Proteasome subunit alpha type n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZ80_9STRA)

HSP 1 Score: 298 bits (763), Expect = 1.750e-100
Identity = 143/170 (84.12%), Postives = 158/170 (92.94%), Query Frame = 1 
Query:    1 MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGILAKDGIVMAAERKVVSKLLAPSKTSEKTYRLYENASCVVAGLTADANLLINHARVSAQRYLYKYGEDMPLEQLVKEVCNYKQAYTQFGGLRPFGVSFLFTGWDQHHGFQLYHSDPSGNYGGWKATAIGANNQA 510
            MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGILA DGIVMAAER+ VSKLLAP+KTSEKTYR+ ++ + VVAGLTADAN+LI  ARV++QRYLY+Y E MP+EQL++ VCNYKQAYTQFGGLRPFGVSFLF GWD+H+GFQLY SDPSGNYGGWKATAIGANNQA
Sbjct:    1 MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGILATDGIVMAAERRTVSKLLAPAKTSEKTYRIDDHVAAVVAGLTADANILIQEARVASQRYLYQYQEPMPVEQLIERVCNYKQAYTQFGGLRPFGVSFLFAGWDKHYGFQLYQSDPSGNYGGWKATAIGANNQA 170
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BLAST of mRNA_H-elongata_contig7003.14657.1 vs. uniprot
Match: A0A836CL31_9STRA (Proteasome subunit alpha type n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL31_9STRA)

HSP 1 Score: 297 bits (760), Expect = 5.170e-100
Identity = 147/171 (85.96%), Postives = 157/171 (91.81%), Query Frame = 1 
Query:    1 MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGILAKD-GIVMAAERKVVSKLLAPSKTSEKTYRLYENASCVVAGLTADANLLINHARVSAQRYLYKYGEDMPLEQLVKEVCNYKQAYTQFGGLRPFGVSFLFTGWDQHHGFQLYHSDPSGNYGGWKATAIGANNQA 510
            MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGILA D GIV+AAERK VSKLLAPSKTSEKTY+L +  SCVVAGLTADAN+LIN AR++AQRYLY+Y E MP+EQLV+ VCN KQAYTQFGGLRPFGV+FLF GWD HHGFQLY SDPSGNYGGWKATAIGANNQA
Sbjct:    1 MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGILAGDNGIVLAAERKTVSKLLAPSKTSEKTYKLDDATSCVVAGLTADANILINQARLAAQRYLYQYQEAMPVEQLVQRVCNMKQAYTQFGGLRPFGVAFLFAGWDAHHGFQLYQSDPSGNYGGWKATAIGANNQA 171
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BLAST of mRNA_H-elongata_contig7003.14657.1 vs. uniprot
Match: A0A6V1N066_HETAK (Proteasome subunit alpha type n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1N066_HETAK)

HSP 1 Score: 288 bits (738), Expect = 1.110e-96
Identity = 136/170 (80.00%), Postives = 154/170 (90.59%), Query Frame = 1 
Query:    1 MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGILAKDGIVMAAERKVVSKLLAPSKTSEKTYRLYENASCVVAGLTADANLLINHARVSAQRYLYKYGEDMPLEQLVKEVCNYKQAYTQFGGLRPFGVSFLFTGWDQHHGFQLYHSDPSGNYGGWKATAIGANNQA 510
            M+RRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVG+LAKDGIVMAAER+ VSKLLAP+KTSEK YR+ ++ S VVAGLT+DAN+L+  AR+++QRYLY YG  MPLEQLV+ VCNYKQAYTQ+GGLRPFGV+F+F GWD+H GFQLYHSDPSGNY GW A AIGANNQA
Sbjct:    1 MSRRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGLLAKDGIVMAAERRTVSKLLAPAKTSEKVYRIDDHVSAVVAGLTSDANILLQQARLASQRYLYSYGAPMPLEQLVQRVCNYKQAYTQYGGLRPFGVAFMFAGWDEHFGFQLYHSDPSGNYSGWFANAIGANNQA 170
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BLAST of mRNA_H-elongata_contig7003.14657.1 vs. uniprot
Match: A0A7S3PYZ9_9STRA (Proteasome subunit alpha type n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PYZ9_9STRA)

HSP 1 Score: 283 bits (723), Expect = 5.990e-94
Identity = 135/170 (79.41%), Postives = 154/170 (90.59%), Query Frame = 1 
Query:    1 MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGILAKDGIVMAAERKVVSKLLAPSKTSEKTYRLYENASCVVAGLTADANLLINHARVSAQRYLYKYGEDMPLEQLVKEVCNYKQAYTQFGGLRPFGVSFLFTGWDQHHGFQLYHSDPSGNYGGWKATAIGANNQA 510
            MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGILA+DG+VMA+E+K+ S LLAPSKTSEKTY+L ++A+C VAGLTADAN+LI+ AR+ A RY Y+Y E +P+EQLV+ VCNYKQAYTQ+GGLRPFGV+FLF G+D HHGFQLY SDPSGNY GWKAT IGANNQA
Sbjct:    1 MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGILARDGVVMASEKKLTSGLLAPSKTSEKTYKLCQHAACNVAGLTADANILIDQARLRAGRYEYQYVEPIPMEQLVEHVCNYKQAYTQYGGLRPFGVAFLFAGYDHHHGFQLYQSDPSGNYSGWKATVIGANNQA 170
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BLAST of mRNA_H-elongata_contig7003.14657.1 vs. uniprot
Match: A0A7S1YQT7_9STRA (Proteasome subunit alpha type n=2 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A7S1YQT7_9STRA)

HSP 1 Score: 281 bits (720), Expect = 2.990e-93
Identity = 135/170 (79.41%), Postives = 153/170 (90.00%), Query Frame = 1 
Query:    1 MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGILAKDGIVMAAERKVVSKLLAPSKTSEKTYRLYENASCVVAGLTADANLLINHARVSAQRYLYKYGEDMPLEQLVKEVCNYKQAYTQFGGLRPFGVSFLFTGWDQHHGFQLYHSDPSGNYGGWKATAIGANNQA 510
            MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGILAKDG+VMA+ER+V S LLAP+KTSEKTY+L  +A+C VAGLTADAN+LI+ AR+ A RY Y+Y E +P+EQLV+ VCNYKQAYTQ+GGLRPFGV+FLF G+D+ HGFQLY SDPSGNY GWKAT IGANNQA
Sbjct:   25 MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGILAKDGVVMASERRVTSGLLAPAKTSEKTYKLCSHAACTVAGLTADANILIDEARLRAGRYEYQYQEHIPIEQLVEHVCNYKQAYTQYGGLRPFGVAFLFAGYDETHGFQLYQSDPSGNYSGWKATVIGANNQA 194
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BLAST of mRNA_H-elongata_contig7003.14657.1 vs. uniprot
Match: A0A7S1ZZL2_TRICV (Proteasome subunit alpha type (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZZL2_TRICV)

HSP 1 Score: 276 bits (705), Expect = 1.480e-92
Identity = 131/170 (77.06%), Postives = 151/170 (88.82%), Query Frame = 1 
Query:    1 MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGILAKDGIVMAAERKVVSKLLAPSKTSEKTYRLYENASCVVAGLTADANLLINHARVSAQRYLYKYGEDMPLEQLVKEVCNYKQAYTQFGGLRPFGVSFLFTGWDQHHGFQLYHSDPSGNYGGWKATAIGANNQA 510
            MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVG+LA+DGIVMA E++V S LLAP KTSEK Y+L ++++C VAGLTADAN+LI+ AR+ A RY Y+Y E +P+EQLV+ VCNYKQAYTQ+GGLRPFGV+FLF G+D+ HGFQLY SDPSGNY GWKAT IGANNQA
Sbjct:    1 MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGVLARDGIVMACEKRVTSGLLAPPKTSEKIYKLCDHSACTVAGLTADANILIDQARLRAGRYQYQYQESIPVEQLVEHVCNYKQAYTQYGGLRPFGVAFLFAGYDETHGFQLYQSDPSGNYSGWKATVIGANNQA 170
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BLAST of mRNA_H-elongata_contig7003.14657.1 vs. uniprot
Match: A0A7S3GVF6_9STRA (Proteasome subunit alpha type n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GVF6_9STRA)

HSP 1 Score: 276 bits (706), Expect = 1.950e-91
Identity = 131/170 (77.06%), Postives = 148/170 (87.06%), Query Frame = 1 
Query:    1 MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGILAKDGIVMAAERKVVSKLLAPSKTSEKTYRLYENASCVVAGLTADANLLINHARVSAQRYLYKYGEDMPLEQLVKEVCNYKQAYTQFGGLRPFGVSFLFTGWDQHHGFQLYHSDPSGNYGGWKATAIGANNQA 510
            MARRYD STTTFSPEGRLHQVEYAIEAINNAGTCVG+L+ DGIV+ AER+VVSKLLAPSKTSEKTY +  +   +VAGLTADAN+LIN +R+ +QRYLYKY E MP+EQ+VK VCNYKQAYTQ+GGLRPFG +FLF GWD + GFQLY +DPSGNY GWKAT IG NNQA
Sbjct:   17 MARRYDQSTTTFSPEGRLHQVEYAIEAINNAGTCVGLLSADGIVLTAERRVVSKLLAPSKTSEKTYTIDNHVVALVAGLTADANILINQSRLGSQRYLYKYQEPMPVEQVVKSVCNYKQAYTQYGGLRPFGTAFLFAGWDSNFGFQLYQTDPSGNYSGWKATVIGQNNQA 186
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BLAST of mRNA_H-elongata_contig7003.14657.1 vs. uniprot
Match: B8C0E7_THAPS (Proteasome subunit alpha type n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C0E7_THAPS)

HSP 1 Score: 276 bits (705), Expect = 2.340e-91
Identity = 132/170 (77.65%), Postives = 151/170 (88.82%), Query Frame = 1 
Query:    1 MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGILAKDGIVMAAERKVVSKLLAPSKTSEKTYRLYENASCVVAGLTADANLLINHARVSAQRYLYKYGEDMPLEQLVKEVCNYKQAYTQFGGLRPFGVSFLFTGWDQHHGFQLYHSDPSGNYGGWKATAIGANNQA 510
            MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGT VGILA+DG+VMA+ERKV S LLAP++TSEKTY+L  +A+C VAGLTADAN+LI+ AR+ A RY Y+Y E +P+E LV+ VCNYKQAYTQ+GGLRPFGV+FLF G+D+ HGFQLY SDPSGNY GWKAT IGANNQA
Sbjct:    1 MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTSVGILARDGVVMASERKVTSGLLAPARTSEKTYKLCPHATCTVAGLTADANILIDQARLRAGRYAYQYQEPIPIENLVEHVCNYKQAYTQYGGLRPFGVAFLFAGYDEQHGFQLYQSDPSGNYSGWKATVIGANNQA 170
[Close]
BLAST of mRNA_H-elongata_contig7003.14657.1 vs. uniprot
Match: A0A7S1UNW8_9STRA (Proteasome subunit alpha type n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UNW8_9STRA)

HSP 1 Score: 275 bits (702), Expect = 6.700e-91
Identity = 132/170 (77.65%), Postives = 151/170 (88.82%), Query Frame = 1 
Query:    1 MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGILAKDGIVMAAERKVVSKLLAPSKTSEKTYRLYENASCVVAGLTADANLLINHARVSAQRYLYKYGEDMPLEQLVKEVCNYKQAYTQFGGLRPFGVSFLFTGWDQHHGFQLYHSDPSGNYGGWKATAIGANNQA 510
            MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGILAKDGIVMA+ER++ S LLAP+KTSEKTY+L  +++C VAGLTADAN+LI+ AR+ A RY Y+Y E +P+EQLV+ VCNYKQ+YTQ+GGLRPFGV+FLF G+D   GFQLY SDPSGNY GWKAT IGANNQA
Sbjct:    1 MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGILAKDGIVMASERRITSGLLAPAKTSEKTYKLCNHSACNVAGLTADANILIDQARLRAGRYQYQYQEPIPVEQLVEHVCNYKQSYTQYGGLRPFGVAFLFAGYDDQFGFQLYQSDPSGNYSGWKATVIGANNQA 170
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7003.14657.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQ20_ECTSI7.660e-11897.06Proteasome subunit alpha type n=1 Tax=Ectocarpus s... [more]
A0A7S2XZ80_9STRA1.750e-10084.12Proteasome subunit alpha type n=1 Tax=Fibrocapsa j... [more]
A0A836CL31_9STRA5.170e-10085.96Proteasome subunit alpha type n=1 Tax=Tribonema mi... [more]
A0A6V1N066_HETAK1.110e-9680.00Proteasome subunit alpha type n=1 Tax=Heterosigma ... [more]
A0A7S3PYZ9_9STRA5.990e-9479.41Proteasome subunit alpha type n=1 Tax=Chaetoceros ... [more]
A0A7S1YQT7_9STRA2.990e-9379.41Proteasome subunit alpha type n=2 Tax=Lithodesmiac... [more]
A0A7S1ZZL2_TRICV1.480e-9277.06Proteasome subunit alpha type (Fragment) n=1 Tax=T... [more]
A0A7S3GVF6_9STRA1.950e-9177.06Proteasome subunit alpha type n=2 Tax=Spumella elo... [more]
B8C0E7_THAPS2.340e-9177.65Proteasome subunit alpha type n=1 Tax=Thalassiosir... [more]
A0A7S1UNW8_9STRA6.700e-9177.65Proteasome subunit alpha type n=1 Tax=Grammatophor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig7003contigH-elongata_contig7003:4583..7423 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score345.1
Seed ortholog evalue1.8e-92
Seed eggNOG ortholog2880.D8LQ20
KEGG koko:K02728
KEGG Pathwayko03050,map03050
KEGG ModuleM00337,M00340
GOsGO:0000502,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005773,GO:0005829,GO:0005839,GO:0005840,GO:0006508,GO:0006511,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010035,GO:0010038,GO:0010498,GO:0010499,GO:0012505,GO:0016020,GO:0016043,GO:0019538,GO:0019773,GO:0019941,GO:0022607,GO:0022626,GO:0030163,GO:0031597,GO:0032991,GO:0034515,GO:0034622,GO:0042175,GO:0042221,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043248,GO:0043632,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046686,GO:0050896,GO:0051603,GO:0065003,GO:0071704,GO:0071840,GO:0080129,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1905368,GO:1905369,GO:1990904
EggNOG free text desc.threonine-type endopeptidase activity
EggNOG OGsCOG0638@1,KOG0178@2759
EC3.4.25.1
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01002,ko03051
Hectar predicted targeting categoryother localisation
Exons4
Model size514
Cds size513
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig7003.14657.1prot_H-elongata_contig7003.14657.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig7003 4583..7423 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931098.5936084-CDS-H-elongata_contig7003:4582..46421622931098.5936084-CDS-H-elongata_contig7003:4582..4642Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7003 4583..4642 +
1691679697.3009684-CDS-H-elongata_contig7003:4582..46421691679697.3009684-CDS-H-elongata_contig7003:4582..4642Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7003 4583..4642 +
1622931098.6163287-CDS-H-elongata_contig7003:5431..55711622931098.6163287-CDS-H-elongata_contig7003:5431..5571Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7003 5432..5571 +
1691679697.3143997-CDS-H-elongata_contig7003:5431..55711691679697.3143997-CDS-H-elongata_contig7003:5431..5571Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7003 5432..5571 +
1622931098.6275651-CDS-H-elongata_contig7003:6475..66321622931098.6275651-CDS-H-elongata_contig7003:6475..6632Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7003 6476..6632 +
1691679697.325175-CDS-H-elongata_contig7003:6475..66321691679697.325175-CDS-H-elongata_contig7003:6475..6632Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7003 6476..6632 +
1622931098.6390843-CDS-H-elongata_contig7003:7267..74231622931098.6390843-CDS-H-elongata_contig7003:7267..7423Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7003 7268..7423 +
1691679697.3383162-CDS-H-elongata_contig7003:7267..74231691679697.3383162-CDS-H-elongata_contig7003:7267..7423Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7003 7268..7423 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig7003.14657.1

>prot_H-elongata_contig7003.14657.1 ID=prot_H-elongata_contig7003.14657.1|Name=mRNA_H-elongata_contig7003.14657.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=171bp
MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGILAKDGIVMAAERK
VVSKLLAPSKTSEKTYRLYENASCVVAGLTADANLLINHARVSAQRYLYK
YGEDMPLEQLVKEVCNYKQAYTQFGGLRPFGVSFLFTGWDQHHGFQLYHS
DPSGNYGGWKATAIGANNQAR
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mRNA from alignment at H-elongata_contig7003:4583..7423+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig7003.14657.1 ID=mRNA_H-elongata_contig7003.14657.1|Name=mRNA_H-elongata_contig7003.14657.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2841bp|location=Sequence derived from alignment at H-elongata_contig7003:4583..7423+ (Himanthalia elongata Himel1 dioecious)
ATGGCTCGGAGGTATGACAGCAGCACGACAACCTTCTCTCCCGAAGGTCG
ATTGCATCAGGTGAGGAGAGGACTGGTGGGACTTGGGGGAGAGGCGGGGG
GGCTGGTAGAGGGGGTTTACCTCGATCTTTTATGCACTGCATGTGAGCGC
AATAAAACATGTACACTGAAACGTCATTTGTCAATGACGCAAAGTACGTT
AAACAGGCAGCGGTCGATCAGAGCTTGGCGTTTGCGTGTTGAAGAGCAGC
GGGGGGAAGGCGGTTAGGCCTCCGGAGGTCTACAGGCGTCTGCCGTCGCA
AAACTCAGTAGTCGGGAAAGGGCAAACTAGTAACGTACAACGAACCCCGA
CTGTCAATCGTTTGAAGTCGAGAGGGTTCATCAACCTGTTCATGCAGACG
AGGGTAGGTCACCTGACGACGACCAGTGGTGATACTATACAGACGTTTGC
CCTATAATAGAAGCTTCGGCACCCGGATTCGATGACTCGGGGAGAGGTAA
AGCACCAAGCTGTCGCGGATGAGATATATGTGTTAATAGCAATTAGCACG
TAACCCACTGTTCTTCTAAAAGGTGGGCTAAACCTGAGCGCTCTCGGCCT
GTGAGTTGGTTCCAGCCGAATCTTCATAGTTTTGGTTGCCTTGCAGGCTT
TCAAACTCTTCTTTCTTCGCCCGGTATCTCGAATTGCCTGCGCAGGTGGC
CGTTGGTGTAGCCCGACGTTCAAGGTACACTTTTTTTATGATCGCTGCGC
TTGCCCTGCCTACCGCCGGAGGTTGTCGAAGGTGGTAGCGGTTTCCTATG
ACTTAGCTTGGAATTTCGTGAACCCTCGCTCTTTCGTTTTGACCCGAAGG
TTGAGTACGCAATCGAGGCAATCAACAACGCGGGAACTTGCGTGGGCATC
CTGGCGAAGGATGGGATCGTCATGGCGGCAGAGCGAAAGGTCGTGTCCAA
GCTCCTGGCTCCTTCCAAGACATCCGAGAAGACTTATCGGTGCGGTATCG
GTATCGACGTCAAACCGAGAGCCACCCGTGGCCGTTCTTGTCCGCGCGAT
TACCGGCATCAATCGTGACACGGATTGCGTGAGAATCCGAAACAACTTGT
TGATATCCGGAACGTTGTGCTGACATAGTAGTACCAAGACACCACTGAGG
ATTCCTTCCATGACCCTCAACCCCCCCCCCCCCCCCCCCCCCCCCCCTCC
TGGCGCTCGTCTGGATCCCGCTCCGCNNNNNNNNNNGTACGTTGTGCTCA
CACAGTAGCCCCCAGCCCCCCCTGTGTATTCCTTCCATGGCCCCCCCCCC
CCCCCCCCCCGCCCTCCCGTTTATGCGGTGTGTCCTGTGAACTCAGAGGC
CTCGGTCTAAGAGTCTTCTTTCTCTGTCTCTTCCCAAAGGGGTCAAGGGC
ATCATAGTATGTAGGATGTATGCTAAATAATGGATTGCTGGAACACCCTA
AAGTAATCATAGGCTAATAATAAGTGCTCCGCCGGGAGGATACATTCATG
AGCAGATTATAGTCTGCGCGTATCACACGTATACCGTTGCGTATGGGAGG
TGTGCGGGAGGTGCTTATTCTTTCTCATCGGAGTGTAGTCGTTCCCGATG
AATGAGCAAAACACTTATTTACCCCGCCGTGTCCAATTAAAACCCATGGA
TATATTCAGTTTGGTGTTGCAAACGCAAGGATGAGAACTAAAAGCTTTTA
TTAGTAGTACTGTATCATCCTTGGTAAAACACAAGCCCGGCCAGCGAAAA
CTCGGTGTAATGTCGCTTCGTCTCGGCATTGTTGGAATGCCTGATCTACT
GTGTCCGTTAGGGTACGGCATACACGCGTTTAACATAAGTACTCCCTACC
CCCCCCCCTTTCCCAAACGCCTTCCGTTAAATTAACTCCCAAGGTTGTAT
GAAAACGCCTCGTGTGTAGTGGCGGGGCTAACCGCAGATGCCAACTTGCT
GATCAACCACGCGAGAGTGTCGGCCCAGCGATACCTATACAAATACGGGG
AGGACATGCCGCTGGAGCAGCTTGTGAAGGAAGTCTGCAACTACAAACAG
GTGTGCATTTTCGTCGCTGCGAAGAACGGGCACCGCCTCCAGAGAATGCT
GGCCACTCACCTGCGGTCTTGTGTCTCCGGGTCTCAAGCGAACAACCGTT
TTTTTGTGTGTTCAGTGTTGTCCGTACGGTGGAGCGCTCGCGCTGGTGGT
TGGGTTTTCATGCTTCCCCCCCCCGAGCATGTTTTTTTCTCGAGGCCCGA
TCGAACGGGATCCACACGGCAGCCCGCGGCGAGACATGCAGGCCTTCGCG
AGCCCTTGATACCACCATTCACGGAGAAACAAGAGCCGGCCTTTAGAGAG
ACGTATCAGGCGCTTGTGTCGGCGAAAGCAGAGAGCTCACGTTAAACGGA
AAAGACAGATCTCGATATATCTGAAAACCTACGCGCAGCCGGCAGCCGCG
CCGCGCTCTACTGTTGAGTAGCTTGAAAACCGTTGCCCTCGAATGGAAGT
GACGCGGTTGCGCTGTGATATGATTTTATTGTAAACTAGTACGAGGCAAA
GCCCTTTATGACCCGGCTGACTGCATTGCGTTTTCGTGTTTAGACCTTGT
TTTGACGGCTCGCGTATGTGTGTGTGTATATATATGTGTGTGCGTGCCTC
GCGCGCGCCACCCTCGATTGACATCAACGCGCCAGGCTTACACACAGTTC
GGAGGCTTGCGGCCATTCGGGGTGTCCTTCCTCTTCACAGGGTGGGACCA
GCACCACGGCTTCCAGCTCTACCACAGCGACCCCAGCGGGAACTACGGCG
GCTGGAAGGCCACGGCGATCGGCGCGAACAATCAGGCGAGA
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Coding sequence (CDS) from alignment at H-elongata_contig7003:4583..7423+

>mRNA_H-elongata_contig7003.14657.1 ID=mRNA_H-elongata_contig7003.14657.1|Name=mRNA_H-elongata_contig7003.14657.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1026bp|location=Sequence derived from alignment at H-elongata_contig7003:4583..7423+ (Himanthalia elongata Himel1 dioecious)
ATGGCTCGGAGGTATGACAGCAGCACGACAACCTTCTCTCCCGAAGGTCG
ATTGCATCAGATGGCTCGGAGGTATGACAGCAGCACGACAACCTTCTCTC
CCGAAGGTCGATTGCATCAGGTTGAGTACGCAATCGAGGCAATCAACAAC
GCGGGAACTTGCGTGGGCATCCTGGCGAAGGATGGGATCGTCATGGCGGC
AGAGCGAAAGGTCGTGTCCAAGCTCCTGGCTCCTTCCAAGACATCCGAGA
AGACTTATCGGTTGAGTACGCAATCGAGGCAATCAACAACGCGGGAACTT
GCGTGGGCATCCTGGCGAAGGATGGGATCGTCATGGCGGCAGAGCGAAAG
GTCGTGTCCAAGCTCCTGGCTCCTTCCAAGACATCCGAGAAGACTTATCG
GTTGTATGAAAACGCCTCGTGTGTAGTGGCGGGGCTAACCGCAGATGCCA
ACTTGCTGATCAACCACGCGAGAGTGTCGGCCCAGCGATACCTATACAAA
TACGGGGAGGACATGCCGCTGGAGCAGCTTGTGAAGGAAGTCTGCAACTA
CAAACAGGTTGTATGAAAACGCCTCGTGTGTAGTGGCGGGGCTAACCGCA
GATGCCAACTTGCTGATCAACCACGCGAGAGTGTCGGCCCAGCGATACCT
ATACAAATACGGGGAGGACATGCCGCTGGAGCAGCTTGTGAAGGAAGTCT
GCAACTACAAACAGGCTTACACACAGTTCGGAGGCTTGCGGCCATTCGGG
GTGTCCTTCCTCTTCACAGGGTGGGACCAGCACCACGGCTTCCAGCTCTA
CCACAGCGACCCCAGCGGGAACTACGGCGGCTGGAAGGCCACGGCGATCG
GCGCGAACAATCAGGCGAGAGCTTACACACAGTTCGGAGGCTTGCGGCCA
TTCGGGGTGTCCTTCCTCTTCACAGGGTGGGACCAGCACCACGGCTTCCA
GCTCTACCACAGCGACCCCAGCGGGAACTACGGCGGCTGGAAGGCCACGG
CGATCGGCGCGAACAATCAGGCGAGA
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