mRNA_H-elongata_contig6997.14642.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig6997.14642.1
Unique NamemRNA_H-elongata_contig6997.14642.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig6997.14642.1 vs. uniprot
Match: D7FPE1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPE1_ECTSI)

HSP 1 Score: 205 bits (521), Expect = 3.680e-62
Identity = 104/164 (63.41%), Postives = 128/164 (78.05%), Query Frame = 1 
Query:  241 LALAVKAGRPSASAFCVMAASIKN-IHVCTNKSCRKMGSRTTLDTFRALAPP-DVDVIESGCQGKCGLGPNVLTKPMEEVYSGVSQPVTAAAIIEIDFAYAVPDALLGAFASVPEGDILYQRGLHVDALACYNKCINTRGAFDKNANALSVVKVKQSSAMRKVA 726
            L +AV    P+A AFC  + S K  +HVCTN SCRK GSR T+DTFRA APP D+ V+E+GCQG+CGLGPN+LT+P EEVY+GV+QP T AAIIEIDF   V D L+GAF  V +GD+L++RGL  +ALACYN+CI+T GAF+ + NALSV KVKQSSAMR +A
Sbjct:   20 LFMAVSPAAPAAVAFCSSSMSTKGTVHVCTNTSCRKAGSRWTVDTFRAFAPPGDIKVLETGCQGRCGLGPNILTRPSEEVYNGVAQPATVAAIIEIDFGVPVADTLVGAFGHVSKGDVLFKRGLFAEALACYNQCIDTAGAFEGSTNALSVAKVKQSSAMRLLA 183
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BLAST of mRNA_H-elongata_contig6997.14642.1 vs. uniprot
Match: A0A7S2V0W4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0W4_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 3.560e-18
Identity = 43/113 (38.05%), Postives = 68/113 (60.18%), Query Frame = 1 
Query:  304 IKNIHVCTNKSCRKMGSRTTLDTFRALAPPDVDVIESGCQGKCGLGPNVLTKPMEEVYSGVSQPVTAAAIIEIDFAYAVPDALLGAFASVPEGDILYQRGLHVDALACYNKCI 642
            I++I +C N++CRK G+  T + F A+ PP++ +  +GCQGKCG GPNV  +P  + Y+GV QP T AAI+EI     V D ++  +    + D L ++     AL  Y++ +
Sbjct:   21 IQSISICNNRNCRKDGASETYEVFEAMTPPEMQISFTGCQGKCGSGPNVRVEPGAKDYAGVHQPATVAAILEIALGVVVDDVVVERYTDKMKADKLLKQRQPKKALEMYSQAL 133
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BLAST of mRNA_H-elongata_contig6997.14642.1 vs. uniprot
Match: UPI0009C00CAB (uncharacterized protein LOC18437633 isoform X2 n=1 Tax=Amborella trichopoda TaxID=13333 RepID=UPI0009C00CAB)

HSP 1 Score: 73.9 bits (180), Expect = 3.530e-12
Identity = 34/73 (46.58%), Postives = 44/73 (60.27%), Query Frame = 1 
Query:  304 IKNIHVCTNKSCRKMGSRTTLDTFRALAPPDVDVIESGCQGKCGLGPNVLTKPMEEVYSGVSQPVTAAAIIEI 522
            +K I VC NKSCRK+GSR TL+    LAPP++ V    C G+CG GPN++  P EE  S    P   A ++ I
Sbjct:   43 VKEIRVCLNKSCRKLGSRETLELMSDLAPPEISVKSCSCLGRCGSGPNLVLLPAEEFVSHCDTPAKIADLLAI 115
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BLAST of mRNA_H-elongata_contig6997.14642.1 vs. uniprot
Match: W1PQI6_AMBTC (Uncharacterized protein n=1 Tax=Amborella trichopoda TaxID=13333 RepID=W1PQI6_AMBTC)

HSP 1 Score: 73.9 bits (180), Expect = 4.770e-12
Identity = 34/73 (46.58%), Postives = 44/73 (60.27%), Query Frame = 1 
Query:  304 IKNIHVCTNKSCRKMGSRTTLDTFRALAPPDVDVIESGCQGKCGLGPNVLTKPMEEVYSGVSQPVTAAAIIEI 522
            +K I VC NKSCRK+GSR TL+    LAPP++ V    C G+CG GPN++  P EE  S    P   A ++ I
Sbjct:   43 VKEIRVCLNKSCRKLGSRETLELMSDLAPPEISVKSCSCLGRCGSGPNLVLLPAEEFVSHCDTPAKIADLLAI 115
[Close]
BLAST of mRNA_H-elongata_contig6997.14642.1 vs. uniprot
Match: R0I0F3_9BRAS (Uncharacterized protein n=6 Tax=Camelineae TaxID=980083 RepID=R0I0F3_9BRAS)

HSP 1 Score: 71.6 bits (174), Expect = 2.550e-11
Identity = 37/91 (40.66%), Postives = 52/91 (57.14%), Query Frame = 1 
Query:  304 IKNIHVCTNKSCRKMGSRTTLDTFRALAPPDVDVIESGCQGKCGLGPNVLTKPMEEVYSGVSQPVTAAAII--------EIDFAYAVPDAL 552
            +K I VCTN++CR+ GS   L+T  ALAPP++ V  SGC G+CG GPN++  P   +    + P  AA I+        E   ++ V DAL
Sbjct:   18 VKEIRVCTNRTCRRQGSFQILETLTALAPPELRVTPSGCLGRCGAGPNLVALPQGLILRHCATPSRAAEILFSLCGDGREASSSFVVTDAL 108
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BLAST of mRNA_H-elongata_contig6997.14642.1 vs. uniprot
Match: A0A7S3B8R8_9VIRI (Hypothetical protein (Fragment) n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3B8R8_9VIRI)

HSP 1 Score: 71.6 bits (174), Expect = 4.060e-11
Identity = 36/66 (54.55%), Postives = 42/66 (63.64%), Query Frame = 1 
Query:  319 VCTNKSCRKMGSRTTLDTFRALAPPDVDVIESGCQGKCGLGPNVLTKPMEEVYSGVSQPVTAAAII 516
            VCTNK+CRK GSR+TL  F ALAP DV V  +GC GKCG GPNV+  P       VS    AA ++
Sbjct:  131 VCTNKACRKQGSRSTLAAFEALAPEDVTVQSTGCLGKCGAGPNVVLCPSGLKVGHVSTAAHAARLL 196
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BLAST of mRNA_H-elongata_contig6997.14642.1 vs. uniprot
Match: A0A061S794_9CHLO (Tetratricopeptide repeat-containing protein isoform 3 n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061S794_9CHLO)

HSP 1 Score: 71.2 bits (173), Expect = 4.300e-11
Identity = 45/110 (40.91%), Postives = 58/110 (52.73%), Query Frame = 1 
Query:  313 IHVCTNKSCRKMGSRTTLDTFRALAPPDVDVIESGCQGKCGLGPNVLTKPMEEVYSGVSQPVTAAAIIEIDFAYAVPDALLGAFASVPEGDILYQRGLHVDALACYNKCI 642
            + VCTN++CRK G++  L   + L   +V VIESGC GKCG GPNV   P   V   VS P   A I+      AV DA+L A      G  L   G    A++C+N+ I
Sbjct:   44 VRVCTNRTCRKQGAKQILRLTQDLCIENVKVIESGCMGKCGNGPNVGILPPGVVLGHVSTPRLLARILSELCDVAVDDAVLKATELRLRGTSLANAGDLQGAISCWNEAI 153
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BLAST of mRNA_H-elongata_contig6997.14642.1 vs. uniprot
Match: A0A087HAE3_ARAAL (Uncharacterized protein n=2 Tax=Arabis TaxID=50451 RepID=A0A087HAE3_ARAAL)

HSP 1 Score: 70.5 bits (171), Expect = 6.670e-11
Identity = 38/92 (41.30%), Postives = 53/92 (57.61%), Query Frame = 1 
Query:  301 SIKNIHVCTNKSCRKMGSRTTLDTFRALAPPDVDVIESGCQGKCGLGPNVLTKPMEEVYSGVSQPVTAAAII--------EIDFAYAVPDAL 552
            S+K + VCTN++CRK GS   L+T  +LAPPD+ V  +GC G+CG GPN++  P   +    + P  AA I+        E   + AV DAL
Sbjct:   17 SVKELRVCTNRTCRKQGSFQILETLTSLAPPDLRVSPTGCLGRCGSGPNLVALPQGLLLRHCATPSRAAEIMLSLCGDGREASSSSAVTDAL 108
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BLAST of mRNA_H-elongata_contig6997.14642.1 vs. uniprot
Match: A0A388M9V0_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388M9V0_CHABU)

HSP 1 Score: 72.0 bits (175), Expect = 9.130e-11
Identity = 40/119 (33.61%), Postives = 61/119 (51.26%), Query Frame = 1 
Query:  289 VMAASIKNIHVCTNKSCRKMGSRTTLDTFRALAPPDVDVIESGCQGKCGLGPNVLTKPMEEVYSGVSQPVTAAAIIEIDFAYAVPDALLGAFASVPEGDILYQRGLHVDALACYNKCIN 645
            V ++ +  I VC+N++CRK GS TTL   R L PPDV V   GC G+CG GPN++  P   + +  +  V  A ++E     + PD  L A     +G +    G    A   +++ I+
Sbjct:  453 VTSSRVGEIRVCSNRTCRKEGSATTLQLLRDLCPPDVSVDTCGCLGRCGSGPNLVLVPTGMIINHCNSAVHVARLLERQCGVSDPDTNLRALDLNNQGTVALDNGDVARACDLFSQAIS 571
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BLAST of mRNA_H-elongata_contig6997.14642.1 vs. uniprot
Match: A0A2G5CVZ4_AQUCA (Uncharacterized protein n=2 Tax=Aquilegia coerulea TaxID=218851 RepID=A0A2G5CVZ4_AQUCA)

HSP 1 Score: 70.1 bits (170), Expect = 1.260e-10
Identity = 32/68 (47.06%), Postives = 41/68 (60.29%), Query Frame = 1 
Query:  313 IHVCTNKSCRKMGSRTTLDTFRALAPPDVDVIESGCQGKCGLGPNVLTKPMEEVYSGVSQPVTAAAII 516
            I VC NK+CRK GSR TL+   +LAPP V VI  GC GKCG GPN++  P     +  + P   A ++
Sbjct:   49 IRVCVNKTCRKQGSRETLEILSSLAPPHVSVISCGCLGKCGSGPNLVFLPQAVFVNHCATPARTAQVL 116
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6997.14642.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPE1_ECTSI3.680e-6263.41Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2V0W4_9STRA3.560e-1838.05Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
UPI0009C00CAB3.530e-1246.58uncharacterized protein LOC18437633 isoform X2 n=1... [more]
W1PQI6_AMBTC4.770e-1246.58Uncharacterized protein n=1 Tax=Amborella trichopo... [more]
R0I0F3_9BRAS2.550e-1140.66Uncharacterized protein n=6 Tax=Camelineae TaxID=9... [more]
A0A7S3B8R8_9VIRI4.060e-1154.55Hypothetical protein (Fragment) n=1 Tax=Prasinoder... [more]
A0A061S794_9CHLO4.300e-1140.91Tetratricopeptide repeat-containing protein isofor... [more]
A0A087HAE3_ARAAL6.670e-1141.30Uncharacterized protein n=2 Tax=Arabis TaxID=50451... [more]
A0A388M9V0_CHABU9.130e-1133.61Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]
A0A2G5CVZ4_AQUCA1.260e-1047.06Uncharacterized protein n=2 Tax=Aquilegia coerulea... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig6997contigH-elongata_contig6997:462..3369 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score74.3
Seed ortholog evalue7.1e-11
Seed eggNOG ortholog3218.PP1S138_35V6.2
GOsGO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0008022,GO:0008150,GO:0009987,GO:0030544,GO:0031072,GO:0051087
EggNOG free text desc.tetratricopeptide repeat-containing protein
EggNOG OGs2CBQC@1,2QPZN@2759,37Q5C@33090,3GE4H@35493
COG Functional cat.S
Best tax levelStreptophyta
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal anchor
Ec32 ortholog descriptionThioredoxin-like fold
Ec32 orthologEc-14_004590.1
Exons5
Model size744
Cds size597
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig6997.14642.1prot_H-elongata_contig6997.14642.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig6997 609..3369 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931096.9137518-UTR-H-elongata_contig6997:461..6081622931096.9137518-UTR-H-elongata_contig6997:461..608Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6997 462..608 +
1691679696.5257335-UTR-H-elongata_contig6997:461..6081691679696.5257335-UTR-H-elongata_contig6997:461..608Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6997 462..608 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931096.9296637-CDS-H-elongata_contig6997:608..8061622931096.9296637-CDS-H-elongata_contig6997:608..806Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6997 609..806 +
1691679696.5372283-CDS-H-elongata_contig6997:608..8061691679696.5372283-CDS-H-elongata_contig6997:608..806Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6997 609..806 +
1622931096.9478254-CDS-H-elongata_contig6997:2009..20921622931096.9478254-CDS-H-elongata_contig6997:2009..2092Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6997 2010..2092 +
1691679696.5467527-CDS-H-elongata_contig6997:2009..20921691679696.5467527-CDS-H-elongata_contig6997:2009..2092Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6997 2010..2092 +
1622931096.967956-CDS-H-elongata_contig6997:2343..24341622931096.967956-CDS-H-elongata_contig6997:2343..2434Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6997 2344..2434 +
1691679696.556684-CDS-H-elongata_contig6997:2343..24341691679696.556684-CDS-H-elongata_contig6997:2343..2434Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6997 2344..2434 +
1622931096.9793444-CDS-H-elongata_contig6997:2676..28211622931096.9793444-CDS-H-elongata_contig6997:2676..2821Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6997 2677..2821 +
1691679696.5759835-CDS-H-elongata_contig6997:2676..28211691679696.5759835-CDS-H-elongata_contig6997:2676..2821Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6997 2677..2821 +
1622931096.995836-CDS-H-elongata_contig6997:3289..33691622931096.995836-CDS-H-elongata_contig6997:3289..3369Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6997 3290..3369 +
1691679696.5898745-CDS-H-elongata_contig6997:3289..33691691679696.5898745-CDS-H-elongata_contig6997:3289..3369Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6997 3290..3369 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig6997.14642.1

>prot_H-elongata_contig6997.14642.1 ID=prot_H-elongata_contig6997.14642.1|Name=mRNA_H-elongata_contig6997.14642.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=199bp
MSLRDNQRPSPARYRLWRTTIFAAIITTPSFLALAVKAGRPSASAFCVMA
ASIKNIHVCTNKSCRKMGSRTTLDTFRALAPPDVDVIESGCQGKCGLGPN
VLTKPMEEVYSGVSQPVTAAAIIEIDFAYAVPDALLGAFASVPEGDILYQ
RGLHVDALACYNKCINTRGAFDKNANALSVVKVKQSSAMRKVANNMREG
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mRNA from alignment at H-elongata_contig6997:462..3369+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig6997.14642.1 ID=mRNA_H-elongata_contig6997.14642.1|Name=mRNA_H-elongata_contig6997.14642.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2908bp|location=Sequence derived from alignment at H-elongata_contig6997:462..3369+ (Himanthalia elongata Himel1 dioecious)
CAACTTTTTCACGCAAGAGACATCCTCGACTCCCCTGCTACACGTTCCGA
TCATCAGGGAGCGTGTCGCTGAACAGGTTTTGCAGCTGGCGGAAGACATA
TCGATTCCTGTGCTGAAAACAGCAGGCTTTCATCACCTATCCATCTCATG
AGTTTAAGAGATAATCAACGCCCGTCTCCCGCGCGGTATCGGCTCTGGAG
AACGACAATCTTCGCGGCGATTATCACTACGCCCTCATTTTTAGCTCTTG
CAGTCAAGGCTGGCAGACCCTCTGCGTCCGCTTTCTGCGTAATGGCAGCT
AGCATAAAAAATATTCATGTTTGCACGAACAAATCATGCCGGAAGGTGAG
TTGCCGTCTAGACAGGCGGCCTTGGCCCTCTCATCACAACCCCTCCCACA
TACACATGAGCCCCCCGTTGTGCATCGACGGGGGGCAAAATATTGGAGTT
GGCGTCTAGCACCCATGGGGAAATCATTGCGTGTATTTCAGGGATTCGTT
GGATAGCACGCCCACTTTACCCCTCTTGCACTCTTCCTCTTGTTGATACA
AAACTTGATGGGGTCACAGACCACTACTAAGAACTTTTAGCTTGTATATT
TATTTGTACCACGTGGAATGCCGTTGGATACGTAGTGTTGGACTCCCCAG
AGATGATGTGTTGTGTACATCACGCGTTAAAATTTGGGCGGCATAGTGGT
TGACTGGGGTTTATGACCCTCTCTTTTTCTTTCTTCCCTTCAGTTAAAAA
TCATCTAAAAGACCTTGCTTTTACTGTCCACTCCCCTCTAGATTAGGCCA
TAATATGCTTATGACGATTTTGTCCTTAAATGTAGTAAAAATGTCCACAT
TCGAACCTGACGATAGTTGGTCGGTCCCCTGGACTACACCTCTTATGGGG
CTAAGAAGGCGTGGATGTTCGGAGGGTTCTAATGAGCTCAGATGTTTTTA
ATCATAATACCTGGTACATGCTTACGCACTTGAAGTTGTAGTAGTGGCTA
GAGTTCTCATACCTTTCAGTAGGTCCTTCGACACCACCTCAAAGGGCTGC
TCACCGAACATGCCCAATGCGATATATTACTGCAGCGATTGTGCTTTTAG
GGTGTTTTGCTCAAGTTTCGCCCTTGGCAATGATCTCTCAATGCACATCC
CTCCGCGATGCTCATGTTGGATCATGATGGATCATGTGCTTCTGCTGTAC
GCTAAGGGTATAGTGAAACTCATTTGAAGGTAACTCTTGGCCCAAATAAC
TTCGGCGATTATTTTCTAGGGGGTGGGTCTTATCCTAATGAGAGTATACG
TGCTTGCATAGCAGTACAAAGGGGTCACATCATCAGACGTGGAAAATCTT
CCAAGTACCATGTATTTTGTATCAGGTTTGGTACCTCTTGTGGCCCTTGT
GGGTACTCCGAAGTCCCAAAGCGTAGTTCAGGAGACCATCATGCCATCGT
CGGGTTCACCGAATACCGACTATGCTGAGTATTATTATTATGCTTTATTA
CAAGGATATGCAAAAAATTGACGCCTCCTTCTCGTTCCACTGCCACAGAT
GGGTTCTCGCACCACGCTGGATACGTTCAGGGCGCTTGCGCCGCCGGATG
TCGATGTTATCGAGAGTGGTTGCCAGGGAAAGTGAGGAGGGAGGTTCCAT
GCTCAATGAACGATATGCGTAGAGATGCAGCTGTAGCAGCTAGAATCTTG
CTCGGCAGCAGATCGGTCATCCTAAACCCAGGAACTTCGTGTATAAGGAG
TCGTTAACAAGATGCAGCGCATGGAGCTGCAGAGGTAGAGCAGTACCCCT
ATCCCGAACGCCTAATACCACGTACTGTGGGCATCGATACTCAAAACGGT
TTCCCCCACGGCTGTGATTTATCTGCATGTAGGTGTGGCCTGGGACCCAA
CGTGCTCACGAAACCGATGGAAGAGGTGTACAGCGGTGTATCACAACCAG
TTACAGCCGCCGCGATCATCGAGGCAAGCATCCAAAGGCAGAATAAAACA
TTCAGCTACTTGGTACTATGCCGAGGTATGGTGCCTTGGGATAGCGAAAA
ATTCCTCTTACTTCGCCCTCCCTACATCATGGTGAGAGCGCATCTCCCGT
GTTACCCCCGACAAGAGCTAACGCTTTTCTCCTACGATGTGCGCTTTTTT
CACTTCATCGCGGCCGTCTCAACGGCTTGTCGTTTGATTCGCCCCCCCCA
CACACGGTGAAACAGATTGATTTCGCGTACGCCGTTCCAGATGCTCTTTT
GGGGGCCTTCGCCAGCGTCCCGGAGGGGGACATACTATACCAACGGGGCT
TACATGTCGATGCCCTAGCGTGCTACAACAAGTGCATCAACACGCGGGGG
GCTTTCGATAGTGCGTACCCGCGCCGTTTCATGAGATTTTTTTTCGTGTC
TGGTTGTATAAGCGGTGCCTGCAAGCGTACCTCGGGATAACCCTCGTCCG
CAAGCAGTTTGACCCCATATGCGGAGCCGCCTCCCACTCGATACGCGTAC
GTTTTGTGTCAGAAAGACGCCCGCAGATCCGAACGTCAAGACGAGCAAAT
AATCTGAACCGAGCAATGAAGTCGCTTGCAACTCTCGCAGATGACTATTC
CTGATATGCACATTGTTCGAGTACTGTGCACGACAAATTGGTTCTGCAAA
GAGATGGTCGCTGGCGGACCGCATGTCGTCAACGGCAAAATATGTTTGGG
TATCATGGCTTACTGAAGGATTGTGCAACAGGCAGTTGTACGGGCTGCGT
GGCTCGTCGAATCAAAACACCTCAAGACACGCCCATCCCAATTCCATGCC
TGTTCTCGTTCTAACTACCTGGCTTCAGAAAACGCGAACGCGTTGAGCGT
AGTTAAGGTGAAGCAGTCTAGCGCGATGCGAAAGGTGGCCAACAACATGC
GCGAGGGT
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Coding sequence (CDS) from alignment at H-elongata_contig6997:462..3369+

>mRNA_H-elongata_contig6997.14642.1 ID=mRNA_H-elongata_contig6997.14642.1|Name=mRNA_H-elongata_contig6997.14642.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1194bp|location=Sequence derived from alignment at H-elongata_contig6997:462..3369+ (Himanthalia elongata Himel1 dioecious)
ATGAGTTTAAGAGATAATCAACGCCCGTCTCCCGCGCGGTATCGGCTCTG
GAGAACGACAATCTTCGCGGCGATTATCACTACGCCCTCATTTTTAGCTC
TTGCAGTCAAGGCTGGCAGACCCTCTGCGTCCGCTTTCTGCGTAATGGCA
GCTAGCATAAAAAATATTCATGTTTGCACGAACAAATCATGCCGGAAGAT
GAGTTTAAGAGATAATCAACGCCCGTCTCCCGCGCGGTATCGGCTCTGGA
GAACGACAATCTTCGCGGCGATTATCACTACGCCCTCATTTTTAGCTCTT
GCAGTCAAGGCTGGCAGACCCTCTGCGTCCGCTTTCTGCGTAATGGCAGC
TAGCATAAAAAATATTCATGTTTGCACGAACAAATCATGCCGGAAGATGG
GTTCTCGCACCACGCTGGATACGTTCAGGGCGCTTGCGCCGCCGGATGTC
GATGTTATCGAGAGTGGTTGCCAGGGAAAATGGGTTCTCGCACCACGCTG
GATACGTTCAGGGCGCTTGCGCCGCCGGATGTCGATGTTATCGAGAGTGG
TTGCCAGGGAAAGTGTGGCCTGGGACCCAACGTGCTCACGAAACCGATGG
AAGAGGTGTACAGCGGTGTATCACAACCAGTTACAGCCGCCGCGATCATC
GAGGTGTGGCCTGGGACCCAACGTGCTCACGAAACCGATGGAAGAGGTGT
ACAGCGGTGTATCACAACCAGTTACAGCCGCCGCGATCATCGAGATTGAT
TTCGCGTACGCCGTTCCAGATGCTCTTTTGGGGGCCTTCGCCAGCGTCCC
GGAGGGGGACATACTATACCAACGGGGCTTACATGTCGATGCCCTAGCGT
GCTACAACAAGTGCATCAACACGCGGGGGGCTTTCGATAATTGATTTCGC
GTACGCCGTTCCAGATGCTCTTTTGGGGGCCTTCGCCAGCGTCCCGGAGG
GGGACATACTATACCAACGGGGCTTACATGTCGATGCCCTAGCGTGCTAC
AACAAGTGCATCAACACGCGGGGGGCTTTCGATAAAAACGCGAACGCGTT
GAGCGTAGTTAAGGTGAAGCAGTCTAGCGCGATGCGAAAGGTGGCCAACA
ACATGCGCGAGGGTAAAACGCGAACGCGTTGAGCGTAGTTAAGGTGAAGC
AGTCTAGCGCGATGCGAAAGGTGGCCAACAACATGCGCGAGGGT
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