mRNA_H-elongata_contig69883.14636.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig69883.14636.1 vs. uniprot
Match: D7FPL9_ECTSI (Polyribonucleotide nucleotidyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPL9_ECTSI) HSP 1 Score: 164 bits (416), Expect = 1.960e-45 Identity = 82/91 (90.11%), Postives = 88/91 (96.70%), Query Frame = 1
Query: 1 RLYLHYEFPPYCVNETGKIGGVNRRMVGHGSLAERSVLPVMPDTETFPYTTRVSAEVTMSNGSSSMATTCATSLALMDAGVPVSAPVGGIS 273
RLYLHYEFPPYCVNETG++G VNRRMVGHG+LAER+VL VMP+TETFPYTTRVSAEVTMSNGSSSMAT CATSLALMDAGVPVS+PVGGIS
Sbjct: 406 RLYLHYEFPPYCVNETGRVGLVNRRMVGHGNLAERAVLSVMPETETFPYTTRVSAEVTMSNGSSSMATACATSLALMDAGVPVSSPVGGIS 496
BLAST of mRNA_H-elongata_contig69883.14636.1 vs. uniprot
Match: A0A4D9CRD5_9STRA (Polyribonucleotide nucleotidyltransferase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CRD5_9STRA) HSP 1 Score: 136 bits (343), Expect = 2.440e-35 Identity = 64/91 (70.33%), Postives = 79/91 (86.81%), Query Frame = 1
Query: 1 RLYLHYEFPPYCVNETGKIGGVNRRMVGHGSLAERSVLPVMPDTETFPYTTRVSAEVTMSNGSSSMATTCATSLALMDAGVPVSAPVGGIS 273
+ +LHY+FPPY VNETGK+ G NRRMVGHG+LAER++LPV+P ++ FPYT R+++EVT SNGSSSMA+ CA SLALMDAGVPV APV G+S
Sbjct: 465 KAFLHYDFPPYSVNETGKVFGSNRRMVGHGALAERAILPVLPSSDVFPYTIRITSEVTASNGSSSMASACAASLALMDAGVPVKAPVAGVS 555
BLAST of mRNA_H-elongata_contig69883.14636.1 vs. uniprot
Match: F0WH72_9STRA (Polyribonucleotide nucleotidyltransferase n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WH72_9STRA) HSP 1 Score: 136 bits (342), Expect = 3.200e-35 Identity = 61/88 (69.32%), Postives = 78/88 (88.64%), Query Frame = 1
Query: 10 LHYEFPPYCVNETGKIGGVNRRMVGHGSLAERSVLPVMPDTETFPYTTRVSAEVTMSNGSSSMATTCATSLALMDAGVPVSAPVGGIS 273
LHYEFPPYCVNETG++GG+NRRMVGHG+LAE+++LP++P E FPYT R+++E+T S+GSSSMAT C SLAL+DAGVP+ AP+ GIS
Sbjct: 474 LHYEFPPYCVNETGRLGGINRRMVGHGALAEKAILPILPSIEEFPYTIRMTSEITGSDGSSSMATICGVSLALLDAGVPIEAPIAGIS 561
BLAST of mRNA_H-elongata_contig69883.14636.1 vs. uniprot
Match: A0A024G5H3_9STRA (Polyribonucleotide nucleotidyltransferase n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G5H3_9STRA) HSP 1 Score: 135 bits (341), Expect = 4.160e-35 Identity = 60/88 (68.18%), Postives = 78/88 (88.64%), Query Frame = 1
Query: 10 LHYEFPPYCVNETGKIGGVNRRMVGHGSLAERSVLPVMPDTETFPYTTRVSAEVTMSNGSSSMATTCATSLALMDAGVPVSAPVGGIS 273
LHYEFPPYCVNETG++GG+NRRM+GHG+LAE+++LP++P T FPYT R+++E+T S+GSSSMAT C SLAL+DAGVP+ AP+ GIS
Sbjct: 420 LHYEFPPYCVNETGRLGGINRRMIGHGALAEKAILPILPSTTEFPYTIRMTSEITGSDGSSSMATICGVSLALLDAGVPIEAPIAGIS 507
BLAST of mRNA_H-elongata_contig69883.14636.1 vs. uniprot
Match: K3WQA1_GLOUD (Polyribonucleotide nucleotidyltransferase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WQA1_GLOUD) HSP 1 Score: 132 bits (332), Expect = 6.850e-34 Identity = 61/88 (69.32%), Postives = 76/88 (86.36%), Query Frame = 1
Query: 10 LHYEFPPYCVNETGKIGGVNRRMVGHGSLAERSVLPVMPDTETFPYTTRVSAEVTMSNGSSSMATTCATSLALMDAGVPVSAPVGGIS 273
LHYEFPPYCVNETG++GGVNRRM+GHG+LAE++++PV+P + FPYT R+++E S+GSSSMAT C SLALMDAGVP+ APV GIS
Sbjct: 358 LHYEFPPYCVNETGRVGGVNRRMIGHGALAEKALVPVIPSIDQFPYTVRMTSETMGSDGSSSMATVCGVSLALMDAGVPIKAPVAGIS 445
BLAST of mRNA_H-elongata_contig69883.14636.1 vs. uniprot
Match: A0A8K1CU08_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CU08_PYTOL) HSP 1 Score: 131 bits (329), Expect = 1.870e-33 Identity = 59/88 (67.05%), Postives = 76/88 (86.36%), Query Frame = 1
Query: 10 LHYEFPPYCVNETGKIGGVNRRMVGHGSLAERSVLPVMPDTETFPYTTRVSAEVTMSNGSSSMATTCATSLALMDAGVPVSAPVGGIS 273
LHYEFPPYCVNETG++GG+NRRMVGHG+LAE++++PV+P + FPYT R+++E S+GSSSMAT C ++ALMDAGVP+ APV GIS
Sbjct: 489 LHYEFPPYCVNETGRVGGINRRMVGHGALAEKAIVPVIPSIDEFPYTVRMTSETMGSDGSSSMATVCGVTMALMDAGVPIKAPVAGIS 576
BLAST of mRNA_H-elongata_contig69883.14636.1 vs. uniprot
Match: A0A5D6Y279_9STRA (Polyribonucleotide nucleotidyltransferase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y279_9STRA) HSP 1 Score: 130 bits (326), Expect = 4.750e-33 Identity = 59/88 (67.05%), Postives = 75/88 (85.23%), Query Frame = 1
Query: 10 LHYEFPPYCVNETGKIGGVNRRMVGHGSLAERSVLPVMPDTETFPYTTRVSAEVTMSNGSSSMATTCATSLALMDAGVPVSAPVGGIS 273
LHYEFPPYCVNETG++GGVNRRM+GHG+LAE++++PV+P + FPYT R+++E S+GSSSMA C SLALMDAGVP+ +PV GIS
Sbjct: 487 LHYEFPPYCVNETGRVGGVNRRMIGHGALAEKALVPVIPSIDEFPYTVRMTSETMSSDGSSSMAAVCGVSLALMDAGVPIKSPVAGIS 574
BLAST of mRNA_H-elongata_contig69883.14636.1 vs. uniprot
Match: A0A3F2S3N1_9STRA (Polyribonucleotide nucleotidyltransferase n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S3N1_9STRA) HSP 1 Score: 129 bits (324), Expect = 8.900e-33 Identity = 60/88 (68.18%), Postives = 75/88 (85.23%), Query Frame = 1
Query: 10 LHYEFPPYCVNETGKIGGVNRRMVGHGSLAERSVLPVMPDTETFPYTTRVSAEVTMSNGSSSMATTCATSLALMDAGVPVSAPVGGIS 273
LHYEFPP+CVNETG++GG NRRM+GHG+LAE++VLPV+P FPYT R+++EV S+GSSSMAT C SLALMDAGVP+S+ V GI+
Sbjct: 492 LHYEFPPFCVNETGRVGGANRRMIGHGALAEKAVLPVLPSVTEFPYTVRMTSEVVGSDGSSSMATVCGVSLALMDAGVPISSAVAGIA 579
BLAST of mRNA_H-elongata_contig69883.14636.1 vs. uniprot
Match: H3G590_PHYRM (Polyribonucleotide nucleotidyltransferase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G590_PHYRM) HSP 1 Score: 126 bits (317), Expect = 6.990e-32 Identity = 59/88 (67.05%), Postives = 73/88 (82.95%), Query Frame = 1
Query: 10 LHYEFPPYCVNETGKIGGVNRRMVGHGSLAERSVLPVMPDTETFPYTTRVSAEVTMSNGSSSMATTCATSLALMDAGVPVSAPVGGIS 273
LHYEFPP+CVNETG++GG NRRM+GHG+LAE++VLP++P FPYT R+++EV S+GSSSMAT C SLALMDAGVPV V GI+
Sbjct: 393 LHYEFPPFCVNETGRVGGTNRRMIGHGALAEKAVLPILPSVTEFPYTVRMTSEVVGSDGSSSMATVCGVSLALMDAGVPVRRAVAGIA 480
BLAST of mRNA_H-elongata_contig69883.14636.1 vs. uniprot
Match: A0A2D4C0M0_PYTIN (Polyribonucleotide nucleotidyltransferase n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C0M0_PYTIN) HSP 1 Score: 126 bits (317), Expect = 7.790e-32 Identity = 59/88 (67.05%), Postives = 75/88 (85.23%), Query Frame = 1
Query: 10 LHYEFPPYCVNETGKIGGVNRRMVGHGSLAERSVLPVMPDTETFPYTTRVSAEVTMSNGSSSMATTCATSLALMDAGVPVSAPVGGIS 273
LHYEFPPYCVNETG++ GVNRRMVGHG+LAE++++PV+P + FPYT R+++E S+GSSSMAT C ++ALMDAGVP+ APV GIS
Sbjct: 491 LHYEFPPYCVNETGRMSGVNRRMVGHGALAEKALVPVIPAIDEFPYTIRMTSETMGSDGSSSMATVCGVTMALMDAGVPIKAPVAGIS 578 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig69883.14636.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig69883.14636.1 >prot_H-elongata_contig69883.14636.1 ID=prot_H-elongata_contig69883.14636.1|Name=mRNA_H-elongata_contig69883.14636.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=95bp RLYLHYEFPPYCVNETGKIGGVNRRMVGHGSLAERSVLPVMPDTETFPYTback to top mRNA from alignment at H-elongata_contig69883:1601..2829+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig69883.14636.1 ID=mRNA_H-elongata_contig69883.14636.1|Name=mRNA_H-elongata_contig69883.14636.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1229bp|location=Sequence derived from alignment at H-elongata_contig69883:1601..2829+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig69883:1601..2829+ >mRNA_H-elongata_contig69883.14636.1 ID=mRNA_H-elongata_contig69883.14636.1|Name=mRNA_H-elongata_contig69883.14636.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=570bp|location=Sequence derived from alignment at H-elongata_contig69883:1601..2829+ (Himanthalia elongata Himel1 dioecious)back to top |