mRNA_H-elongata_contig6967.14616.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig6967.14616.1
Unique NamemRNA_H-elongata_contig6967.14616.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig6967.14616.1 vs. uniprot
Match: D8LS07_ECTSI (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS07_ECTSI)

HSP 1 Score: 139 bits (349), Expect = 8.600e-32
Identity = 108/281 (38.43%), Postives = 130/281 (46.26%), Query Frame = 1 
Query:    1 IREIGLTGVDLVRAMTVDEGEMNGLHGVTRKARASCVDFKFDPMATFQEKPLGRGFEPYPPPXXXXXXXXXPNXXXXXXXXXXDGKSAGRKRRRGIIPWLSWWGRNDQEIFPEEMSMSSDEPSTSASYPSGAIVADGEEIAVPSCGESASHDDL--SRAFCSVSVEAGPVVEAVMTGSASGGDAGVEAAEAGASVSEGAWEATETRTGPG---ARGGQVVRACELNPSCSICLFEYYLDEEVTLLPCGHLYHTECIDIWMSDHVDCPYCRADINVWATIGG 828
            IRE GL+GV+LVRA+ VD+     L GV+RKARA C+DFK+DP   F+E+  GRGFE YP          X  XXXXXXXXXX                                                              G + + + L   R              A  +G +   + GV +       +E           P      G QV+RA ELN SCS+CLF Y++DE VTLLPCGHLYHTECIDIWM DHVDCPYCRAD+NVW   GG
Sbjct:   98 IRETGLSGVELVRALAVDDPGGVRLRGVSRKARAMCIDFKYDPEGVFRERSAGRGFEMYPTQRPGGGASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----XXXXXXXXXXXXXXXXXXXXXXXXGANDTEETLITRRXXXXXXXXXXXXSAAKPSGVSGSANEGVSSNSNNPDAAELGQPXXXXXXXPAYLERDGRQVIRASELNASCSVCLFGYFVDEAVTLLPCGHLYHTECIDIWMRDHVDCPYCRADMNVWCNSGG 374
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BLAST of mRNA_H-elongata_contig6967.14616.1 vs. uniprot
Match: D8LAX1_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAX1_ECTSI)

HSP 1 Score: 77.8 bits (190), Expect = 2.170e-11
Identity = 30/57 (52.63%), Postives = 40/57 (70.18%), Query Frame = 1 
Query:  640 VVRACELNPSCSICLFEYYLDEEVTLLPCGHLYHTECIDIWMSDHVDCPYCRADINV 810
            VVR  EL   C+ICL +Y   EEV +LPC H++H EC+D+W+  H  CPYC+ D+NV
Sbjct:  313 VVRVSELPDVCAICLGQYATGEEVHVLPCLHIFHAECLDVWIRGHPSCPYCKGDLNV 369
[Close]
BLAST of mRNA_H-elongata_contig6967.14616.1 vs. uniprot
Match: A0A6H5JT04_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT04_9PHAE)

HSP 1 Score: 77.8 bits (190), Expect = 2.920e-11
Identity = 30/57 (52.63%), Postives = 40/57 (70.18%), Query Frame = 1 
Query:  640 VVRACELNPSCSICLFEYYLDEEVTLLPCGHLYHTECIDIWMSDHVDCPYCRADINV 810
            VVR  EL   C+ICL +Y   EEV +LPC H++H EC+D+W+  H  CPYC+ D+NV
Sbjct:  407 VVRVSELPDVCAICLGQYATGEEVHVLPCLHIFHAECLDVWICGHPSCPYCKGDLNV 463
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BLAST of mRNA_H-elongata_contig6967.14616.1 vs. uniprot
Match: A0A7S2HAW0_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HAW0_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 1.100e-9
Identity = 28/47 (59.57%), Postives = 34/47 (72.34%), Query Frame = 1 
Query:  664 PSCSICLFEYYLDEEVTLLPCGHLYHTECIDIWMSDHVDCPYCRADI 804
            PSCSICL EY   E +T LPCGH+YH EC+  W+S+HV CP C  D+
Sbjct:  372 PSCSICLCEYEEGESLTRLPCGHVYHEECVSAWVSNHVRCPLCNYDL 418
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BLAST of mRNA_H-elongata_contig6967.14616.1 vs. uniprot
Match: A0A7S1VRK2_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VRK2_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 1.150e-9
Identity = 26/47 (55.32%), Postives = 34/47 (72.34%), Query Frame = 1 
Query:  664 PSCSICLFEYYLDEEVTLLPCGHLYHTECIDIWMSDHVDCPYCRADI 804
            PSC+ICL EY   E++  LPCGH+YH EC+D W ++HV CP C  D+
Sbjct:  148 PSCTICLGEYEEGEKLVKLPCGHVYHEECVDSWTTNHVRCPLCNFDL 194
[Close]
BLAST of mRNA_H-elongata_contig6967.14616.1 vs. uniprot
Match: D8SNW3_SELML (RING-type domain-containing protein (Fragment) n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SNW3_SELML)

HSP 1 Score: 64.3 bits (155), Expect = 2.480e-9
Identity = 23/48 (47.92%), Postives = 35/48 (72.92%), Query Frame = 1 
Query:  664 PSCSICLFEYYLDEEVTLLP-CGHLYHTECIDIWMSDHVDCPYCRADI 804
            P C++CL ++  +E+V LLP CGHL+H +CID+W+  H  CP CR ++
Sbjct:   28 PECTVCLLQFEENEQVRLLPDCGHLFHADCIDMWLETHSTCPLCRRNL 75
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BLAST of mRNA_H-elongata_contig6967.14616.1 vs. uniprot
Match: A0A7R9Z645_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z645_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 4.430e-9
Identity = 30/58 (51.72%), Postives = 37/58 (63.79%), Query Frame = 1 
Query:  664 PSCSICLFEYYLDEEVTLLPCGHLYHTECIDIWMSDHVDCPYCRADINVWATIGGHAA 837
            PSCSICL +Y   E +  LPCGH+YH EC+  W+S+HV CP C  D+      GGH A
Sbjct:  332 PSCSICLGDYEEGERLIRLPCGHVYHEECVSAWVSNHVRCPLCNYDLEA----GGHEA 385
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BLAST of mRNA_H-elongata_contig6967.14616.1 vs. uniprot
Match: A0A804JMS8_MUSAM ((wild Malaysian banana) hypothetical protein n=1 Tax=Musa acuminata subsp. malaccensis TaxID=214687 RepID=A0A804JMS8_MUSAM)

HSP 1 Score: 68.9 bits (167), Expect = 6.930e-9
Identity = 28/54 (51.85%), Postives = 40/54 (74.07%), Query Frame = 1 
Query:  670 CSICLFEYYLDEEVTLLP-CGHLYHTECIDIWMSDHVDCPYCRADINVWATIGG 828
            C++CL E+  D+E+ LLP C HL+HT+CID+W++ HV CP CRA++   AT  G
Sbjct:  143 CAVCLSEFDDDDELRLLPRCSHLFHTDCIDVWLASHVTCPVCRANLAEPATADG 196
[Close]
BLAST of mRNA_H-elongata_contig6967.14616.1 vs. uniprot
Match: A0A0D3E8S7_BRAOL (RING-type domain-containing protein n=8 Tax=Brassica TaxID=3705 RepID=A0A0D3E8S7_BRAOL)

HSP 1 Score: 64.3 bits (155), Expect = 1.270e-8
Identity = 26/48 (54.17%), Postives = 35/48 (72.92%), Query Frame = 1 
Query:  670 CSICLFEYYLDEEVTL-LPCGHLYHTECIDIWMSDHVDCPYCRADINV 810
            C++CL EY  DE + L LPCGH++H +C+DIW+S    CP CRAD+ V
Sbjct:   87 CAVCLNEYKEDEMLRLILPCGHVFHVDCVDIWLSYRSTCPICRADVIV 134
[Close]
BLAST of mRNA_H-elongata_contig6967.14616.1 vs. uniprot
Match: A0A7S2UAS3_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UAS3_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 1.930e-8
Identity = 26/57 (45.61%), Postives = 35/57 (61.40%), Query Frame = 1 
Query:  634 GQVVRACELNPSCSICLFEYYLDEEVTLLPCGHLYHTECIDIWMSDHVDCPYCRADI 804
            G    A E  PSCSICL EY + + +  LPCGH+YH +C+  W  +HV CP C  ++
Sbjct:  315 GLTTIALEEAPSCSICLSEYEVGDSMVKLPCGHVYHADCVSAWTQNHVRCPLCNFNL 371
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6967.14616.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LS07_ECTSI8.600e-3238.43RING-type domain-containing protein n=2 Tax=Ectoca... [more]
D8LAX1_ECTSI2.170e-1152.63RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JT04_9PHAE2.920e-1152.63RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A7S2HAW0_9STRA1.100e-959.57Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S1VRK2_9STRA1.150e-955.32Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
D8SNW3_SELML2.480e-947.92RING-type domain-containing protein (Fragment) n=3... [more]
A0A7R9Z645_9STRA4.430e-951.72Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A804JMS8_MUSAM6.930e-951.85(wild Malaysian banana) hypothetical protein n=1 T... [more]
A0A0D3E8S7_BRAOL1.270e-854.17RING-type domain-containing protein n=8 Tax=Brassi... [more]
A0A7S2UAS3_9STRA1.930e-845.61Hypothetical protein n=1 Tax=Attheya septentrional... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig6967contigH-elongata_contig6967:1317..7006 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score125.6
Seed ortholog evalue5.1e-26
Seed eggNOG ortholog2880.D8LS07
KEGG koko:K22378
GOsGO:0001664,GO:0003674,GO:0003824,GO:0004842,GO:0005102,GO:0005109,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0007154,GO:0007165,GO:0007166,GO:0007267,GO:0008150,GO:0008152,GO:0008283,GO:0009056,GO:0009057,GO:0009966,GO:0009968,GO:0009987,GO:0010498,GO:0010646,GO:0010648,GO:0016020,GO:0016021,GO:0016055,GO:0016567,GO:0016740,GO:0019538,GO:0019787,GO:0019941,GO:0022603,GO:0023051,GO:0023052,GO:0023057,GO:0030111,GO:0030163,GO:0030178,GO:0031224,GO:0031226,GO:0032446,GO:0032801,GO:0035567,GO:0036211,GO:0038018,GO:0043112,GO:0043161,GO:0043170,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051239,GO:0051603,GO:0051716,GO:0060070,GO:0060071,GO:0060828,GO:0061630,GO:0061659,GO:0065007,GO:0070647,GO:0071704,GO:0071944,GO:0072089,GO:0090090,GO:0090175,GO:0140096,GO:0198738,GO:1901564,GO:1901565,GO:1901575,GO:1905114,GO:1905330,GO:2000026,GO:2000027,GO:2000050,GO:2000051
EggNOG free text desc.ubiquitin-protein transferase activity
EggNOG OGsKOG0800@1,KOG0800@2759
EC2.3.2.27
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko04121
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionZinc finger, RING/FYVE/PHD-type
Ec32 orthologEc-08_001660.1
Exons6
Model size2031
Cds size1131
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig6967.14616.1prot_H-elongata_contig6967.14616.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig6967 1359..6148 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931094.264299-UTR-H-elongata_contig6967:1316..13581622931094.264299-UTR-H-elongata_contig6967:1316..1358Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6967 1317..1358 +
1691679695.415921-UTR-H-elongata_contig6967:1316..13581691679695.415921-UTR-H-elongata_contig6967:1316..1358Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6967 1317..1358 +
1622931094.3936334-UTR-H-elongata_contig6967:6148..70061622931094.3936334-UTR-H-elongata_contig6967:6148..7006Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6967 6149..7006 +
1691679695.4868948-UTR-H-elongata_contig6967:6148..70061691679695.4868948-UTR-H-elongata_contig6967:6148..7006Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6967 6149..7006 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931094.2805436-CDS-H-elongata_contig6967:1358..14091622931094.2805436-CDS-H-elongata_contig6967:1358..1409Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6967 1359..1409 +
1691679695.4264474-CDS-H-elongata_contig6967:1358..14091691679695.4264474-CDS-H-elongata_contig6967:1358..1409Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6967 1359..1409 +
1622931094.2986085-CDS-H-elongata_contig6967:2302..24901622931094.2986085-CDS-H-elongata_contig6967:2302..2490Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6967 2303..2490 +
1691679695.4359589-CDS-H-elongata_contig6967:2302..24901691679695.4359589-CDS-H-elongata_contig6967:2302..2490Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6967 2303..2490 +
1622931094.3211722-CDS-H-elongata_contig6967:2977..30381622931094.3211722-CDS-H-elongata_contig6967:2977..3038Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6967 2978..3038 +
1691679695.4454405-CDS-H-elongata_contig6967:2977..30381691679695.4454405-CDS-H-elongata_contig6967:2977..3038Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6967 2978..3038 +
1622931094.3365707-CDS-H-elongata_contig6967:3636..40411622931094.3365707-CDS-H-elongata_contig6967:3636..4041Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6967 3637..4041 +
1691679695.4554248-CDS-H-elongata_contig6967:3636..40411691679695.4554248-CDS-H-elongata_contig6967:3636..4041Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6967 3637..4041 +
1622931094.361592-CDS-H-elongata_contig6967:4564..48471622931094.361592-CDS-H-elongata_contig6967:4564..4847Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6967 4565..4847 +
1691679695.4659781-CDS-H-elongata_contig6967:4564..48471691679695.4659781-CDS-H-elongata_contig6967:4564..4847Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6967 4565..4847 +
1622931094.376235-CDS-H-elongata_contig6967:6005..61481622931094.376235-CDS-H-elongata_contig6967:6005..6148Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6967 6006..6148 +
1691679695.476709-CDS-H-elongata_contig6967:6005..61481691679695.476709-CDS-H-elongata_contig6967:6005..6148Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6967 6006..6148 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig6967.14616.1

>prot_H-elongata_contig6967.14616.1 ID=prot_H-elongata_contig6967.14616.1|Name=mRNA_H-elongata_contig6967.14616.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=377bp
MTVDEGEMNGLHGVTRKARASCVDFKFDPMATFQEKPLGRGFEPYPPPPE
ATAEAEAPNSPDGDGDDGDDGKSAGRKRRRGIIPWLSWWGRNDQEIFPEE
MSMSSDEPSTSASYPSGAIVADGEEIAVPSCGESASHDDLSRAFCSVSVE
AGPVVEAVMTGSASGGDAGVEAAEAGASVSEGAWEATETRTGPGARGGQV
VRACELNPSCSICLFEYYLDEEVTLLPCGHLYHTECIDIWMSDHVDCPYC
RADINVWATIGGHAAANGAGAGSSPNRAGPETAAAVSGRVFTAPVSAVPA
SAGASTTILRARPALPVEVARETDADSREVDIPLAAGWRFGLPEGCRPIG
WCCDFGHPFSGRQARRPARTAHLSTP*
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mRNA from alignment at H-elongata_contig6967:1317..7006+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig6967.14616.1 ID=mRNA_H-elongata_contig6967.14616.1|Name=mRNA_H-elongata_contig6967.14616.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5690bp|location=Sequence derived from alignment at H-elongata_contig6967:1317..7006+ (Himanthalia elongata Himel1 dioecious)
ATTCGAGAAATTGGTTTGACGGGGGTCGACCTCGTTCGTGCCATGACCGT
CGACGAGGGCGAGATGAACGGCCTGCACGGGGTTACGAGAAAGGTACGTT
AACACGCCTTCGTGCCTTCCACGATAATGCCGCCGTTGCTCTGCTGATAT
GTTTTGTGTGAGTTGTGATTTACTGCAAGAATGGATCAGAAGATTCAAGC
GTACATTGGAACGAAACAACTCGGCCTGGCTGCTGCTGCTGCTGCTGCTG
TAGAGAGCGGTGGAACATCGCATTCTGCGTCGTCTGTGATGGATGCCCGG
TTTGGGTTTTAGTGTTTGTTGGGAGGGGGGTTTGGGGGAGGGGAGGAGAG
GAGTCAACTTAACCCTTATGGAACTCGATCTGTTTGTTAGATACTAAATT
CAATACAAAAAATGAAATCCAGTTCCAAAAGGATGAATCTCACTAAAGAA
AACCTCCTATTTTTTTCTCTTCTCTACGGCACTTTCCGAGAAGTGCTTTT
ACCGCGAGCTGGGCGTTGCATTATGTCCTCCAACATGTTATCTTCTCTGT
AGTAGTAATATTAGTACTACTAATATGAATACTACTATACTGGAGGGTTT
CTGCAAAATATTATCTTCTCTATCGTCATAATATTACTACGAATATTAAT
AATACTGTGCTGTAGGGTGCTCTATTAAAGCCATCCAGCCCCCCCGCCGT
CAGATGGACCAATATTCAATACATGATGGATGGAGCGGAGCACGAAGTAA
CATGGCGAGGTATACACGCACGTCTTGAAAAAAGAACCCCATCCTGTCAT
GTCCAAAACTTGAACACTGTTTTTTAGGACGCATTCTCCCGCCTTTCACA
CACACACACACACACACACACACCCGTTAAAATAAATGTGTCTGCTTGAC
TTCACCCTCTGCCCCCTCCCACCCCGTTTACCATTGATATTGATCCAATC
GTGCAAACCTACCTCGTGTTAAAAATGTCTAAACAGGCGAGGGCCTCATG
CGTCGACTTCAAGTTTGACCCTATGGCGACCTTCCAAGAGAAACCGCTCG
GTCGAGGCTTCGAGCCTTACCCTCCACCGCCCGAGGCAACGGCCGAGGCC
GAAGCGCCAAACTCCCCCGACGGTGATGGCGATGACGGCGATGACGGGAA
ATCTGCAGGGAGGAAGCGCCGGAGGTACTGAAAGCTTGGATTAAGACAGC
AGGGGGACACATGCGTGACCCTTGTTGATAGCGCAATAATTTGATGTCGG
GATGGAAGCAGGGAGGATCTTCTGGGCGAAACGCTTAATTTCAGCTCTAA
TTCCAGCCGTCATACTCGCGTATTATCTATTTCACTTCTTATGTTTGATA
CAGCTGTAAGACACGTATACACACCGAATAGTCGTGTACGAATATAAATG
CAAAGGCAGTGTACTCATAATATCATATTTGAAATTGGCAACGCTCTTTT
GAGCCTGCGCGTGCGGGAACGACGTGTCTGTGTCCGTTTTGCACCATGAT
GTGTACCTATAAACCTTCTTGTGTCTGGCGTTATCACAGAGTAAACGTGT
TTCACGAGATAGCATGTCTGTATCTTACGCGGTGCCTCGCAAGTCTAACA
CGCATGATCCTCTCCTCAACCCTTCTACCCCTTGTCCCTGTCCCTCCTCG
CTCGCGTGCAGGGGAATTATCCCGTGGCTCTCGTGGTGGGGTAGAAACGA
CCAAGAGATCTTTCCCGAGGAGGTGCGTAGTAGTTGTCGCTTGCGGGCAG
AGACTGACCTGCTTTACTCTGCTTTACTTTGCTCTTTTAACGTACAACAG
TGCGACGATTGGTGCTCTCCTGTAGAACCTCTAATTGTTGCCCCAATACC
TGATATAATTGCGGTTTAACGGCCGCGCGGGGCTCTACTAGGTATATATT
CATGGGTGCACGAGAAAAAACGAAAACGAATCGGTAAAACGTTTTTGAGC
GCCACCATCTCTAACGAATTGGGGGCTTCTCTTTGTCCCCGTCGGGATCA
GGGGATCAGGGGAGAGGAAGGAGTGTTGCCTATGTTTTATCAGGGGGTGG
GGAGGTGGGGAGGTCAATTTACTGATCTGTATAATGATGTATTGCGTCAT
TCGCCCATTCATCCACGGTCGGATCATGAATGATTCCAAGGGACGAGTGG
TTCTTATGAATAGTCACGACTTGAATTTCCTTTTCTCGCGGATCTAATCA
ATCGACCCACTCACACCGCGGCGCCTCTGGTGAACGGCGGTGTCCTGCAC
TTGTTACCCGCTTTGATTTTTCAATGCCTTCCGTCTGCCACACGGAATCC
ACGATGTCGACGGCCCTCAGATGAGCATGAGCAGCGACGAGCCGAGTACC
TCCGCCTCCTACCCCTCTGGTGCGATCGTTGCCGACGGCGAAGAGATTGC
CGTCCCCTCGTGCGGTGAAAGCGCCTCCCATGACGATCTCAGCAGGGCTT
TCTGTAGTGTTTCGGTGGAGGCGGGGCCAGTGGTGGAAGCTGTGATGACG
GGGTCAGCGTCAGGAGGAGATGCTGGAGTGGAAGCAGCCGAGGCGGGGGC
GTCTGTCTCGGAGGGCGCGTGGGAGGCAACAGAGACGAGGACCGGCCCCG
GTGCCAGGGGTGGGCAGGTTGTGCGTGCGTGTGAGCTGAATCCGTCTTGT
TCCATCTGCCTTTTTGAGTACTACCTGGACGAGGAGGTTACGCTTCTGCC
GTGCGGGCACCTCTATCACACCGAGGTTCGTCCGTCCTAACAGCGGAGCC
GAGATGGAGATGGATGAAATTTGTTTTTTGCCGGAGAAGGGCTGGGGTGT
GGCCTTGAGTCGACAGACTCTTGGAATATGAATGTTTGAGATTTGTGCGA
GAGTTGAGATCCGGTCTCGTTGTAGATTTTAGTTTGAAGGCTTTTAGGTG
TGTACCTTCTCACCTAGCCTCTCTTTTCTTCAGCAAAATAACACCGAAAG
TTCTGACACCATCGTGTAGCCAGGTGGTTGTTGCCTTATCAAAGGAGCTT
TAAAATACCGGTACATTGGTTCCGTGGTCGTATATTGCTGAGCGAGATCA
TTTTACCACACAAGGTAGTGGGCGGTTTTGCTGTGCTGCGTTCTCATTAC
ATTCCCCTGGTTGTTCTCCGATGCTCGTCCTCACCTACCTGTGCCCTCGA
ATATTCCGTTGTTCGTCGCCGTCGCCGCCCGCTGCCTGCGCTTTGTTTTT
TGCGCGGGCCATGCGCCTTCTTCCCGTGACATCCGCGCGAAACCAAAGTG
TATCGACATATGGATGAGCGATCACGTGGACTGTCCGTACTGCCGTGCGG
ACATCAACGTCTGGGCAACCATTGGAGGCCACGCAGCGGCAAACGGAGCC
GGCGCAGGAAGCTCTCCCAACCGGGCGGGGCCCGAAACTGCCGCCGCTGT
TTCCGGTAGAGTCTTTACCGCTCCTGTTTCAGCCGTCCCCGCATCTGCCG
GTGCCTCAACCACTATCCTCCGCGCGAGACCGGCATTACCAGTAGAGGTG
GCGAGGGAGACCGACGCAGATTCGCGAGAAGGTGACGAGTAGGGAAACTC
TGTTGTTTTTTTATCGTGCTAATATTTGGAGTCTTAAGGTGAAAGAATGC
GGCAGCGGAGGATCTAGGAGTCCTCAAAAACCCTTGATTCTTGGGAATAA
AGCCTCTTCGTGGAGGCGCCGTGGTATATGCTTCGAGCTCGTGATAAATT
TGAGAATGGAGGCGATGCGCTTGAAAGAGTATTGGAGTGGACAGCTACTA
GAGTAAGGCGCGGTGTTGGATATTAGGTTTTTTTTTTGTTCTTCCCCGGC
GAAGGGAGGCGTGCAGGAGGAGAAAAGGAGGTTTAGAGCTACTAGAGTAA
GGCGCGGTGTTGCATATTAGTTTTTTTTTGTTTTTTCCCGGCGAAGGGAG
GCGTGCAGGAGGAGGGGAGGAGGTTTAGGGTCAGTTGGTCCCCACGTATG
ACCCTCGGGAGTCGTGCACGAAGTTGTTCTTTAAGCGATATACCCGTATT
TCCCAAGAAGAGAGGCGTCTATGAATAGTTTTCTCCGGTGTTCCACAAAA
GTTGGAGGACGTCACGGCAGATTTTTATTTTTTATGTTGTTGTGTCAGGC
TGCTGCTGCTGCAGGTACTGTCTATTACCGACCGTACCAGCGGTGTTTCC
TCCGTGGTCAGTTTGAGGGGGAGGGTGTCGTATGCGAAATAAGGTTTTGA
GTCCCTTGTGTCAAGCGTGATAATATTAATAATACTGGTGGTGTAACCGT
CGTTTTTTGGTCGCCAGGTTTTTAATTAAAATTGTTGTGTAATGACGACA
AGAGGAGGGAAAAGACCTGGGGAGGGAATTGGAAAGGACAAGGGTGTCGT
GGCGAAAAGCTATTAATAGTTTCTAGCGGAAAGTTTGTCGAAGACCGCGA
CTCGTGGTAGCCCCCCATCCCGGCTGCCTCCTCCTCACTCTGAATCCACA
TACTGGTTTGAAAATGAGTTGGGCTCGAGGGCGGCTTGTATATCTAGTGG
AGGCGCTGTACACAAGCAAGCGATGTTGTGAAGCTACGTAGTCTTATCTT
TATATATATAGTGTGTGTTCGACGGGTGTGCTCCCCCGTATCCCGTTCCC
TCCCGTTGTCCGATTGAAGATGTGCGTTCCTCGTTTTTTCCCTCTGGCTT
GGCCTGCCTACCCCGCATGATGCTCTGCTCTGCTGGCAGTTGATATCCCC
CTCGCGGCCGGTTGGCGATTCGGTTTGCCTGAAGGCTGCCGACCCATTGG
ATGGTGCTGCGACTTTGGTCACCCTTTTAGCGGTAGGCAAGCTCGAAGGC
CGGCGCGGACCGCACATCTCTCGACACCCTGAAGGTCCGCTACGATATCG
CCTCCGGTGTTGCCATGTTTGCTAGTGCGCAAGTATAAAATCAAATGGCA
AGCCACTCAGCGCAAATGCGGTAGATAGTAGGTAGGTTAGAGTCTGTTTG
CCTGTGGCGTTCTGTTTTTTTTCGTGTGACGAAAGACGCGAAAATTATTT
CATTCGACGGTGGGAAACCAAGAAAACGTTTTGTGATATTTGGATCGTGT
CTGCTTTTAGGGAATCGGCTGTGGGCGATTTTTTTCTGGTTATTGTGTAG
TAAGAGTGTTTTCGGTGCGCGTTATCTTGTGTGGAGGTTTGATGAATCAT
TTTCAGCGAGAGCGTAAAACACCCTATGGAACCTCGATTTGTTTTTTAAA
GACTAAATTCAATATAAAAGTTGAAATTCAGTTCCAAAAGGGTTTAGCGT
CGTTTGGCGTTGTGATGGAAGAAGCAGTGACTTTGCTTAGGTGCTACGGC
GCATTAGTGTACCCCCCCCCCCTCCGCCTGTGTGTATTTGATGTGTACGT
GTGTAAGGCATATTGTGTGTGTGTGTTTTTATTTATGTGTTTGGCTTTTT
ACACGAGATCGTACAAGGTAAAACAGGAGGTTAGCGAAATTATTGAGAAC
GAAGGGAAATGGTAAGGGGGGGTATTTGGGGACGCGTTGAGAATATTGCT
TTTTTTGGTTTCCATGTGAACGTTATTGTTGATTGTTTTTTAACAGGATC
AACAGGATATAATATATATATATATACATATATGGGCACCTTCGTAACAC
TCGAGGGGTATATATCGTCCGTTCCGATGTGTGACGTTGGCTTGGAATGG
TGAGAAGCGAGGCGATCATTTGGGCGGTTCGATCTTTCGC
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Coding sequence (CDS) from alignment at H-elongata_contig6967:1317..7006+

>mRNA_H-elongata_contig6967.14616.1 ID=mRNA_H-elongata_contig6967.14616.1|Name=mRNA_H-elongata_contig6967.14616.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2262bp|location=Sequence derived from alignment at H-elongata_contig6967:1317..7006+ (Himanthalia elongata Himel1 dioecious)
ATGACCGTCGACGAGGGCGAGATGAACGGCCTGCACGGGGTTACGAGAAA
GATGACCGTCGACGAGGGCGAGATGAACGGCCTGCACGGGGTTACGAGAA
AGGCGAGGGCCTCATGCGTCGACTTCAAGTTTGACCCTATGGCGACCTTC
CAAGAGAAACCGCTCGGTCGAGGCTTCGAGCCTTACCCTCCACCGCCCGA
GGCAACGGCCGAGGCCGAAGCGCCAAACTCCCCCGACGGTGATGGCGATG
ACGGCGATGACGGGAAATCTGCAGGGAGGAAGCGCCGGAGGCGAGGGCCT
CATGCGTCGACTTCAAGTTTGACCCTATGGCGACCTTCCAAGAGAAACCG
CTCGGTCGAGGCTTCGAGCCTTACCCTCCACCGCCCGAGGCAACGGCCGA
GGCCGAAGCGCCAAACTCCCCCGACGGTGATGGCGATGACGGCGATGACG
GGAAATCTGCAGGGAGGAAGCGCCGGAGGGGAATTATCCCGTGGCTCTCG
TGGTGGGGTAGAAACGACCAAGAGATCTTTCCCGAGGAGGGGAATTATCC
CGTGGCTCTCGTGGTGGGGTAGAAACGACCAAGAGATCTTTCCCGAGGAG
ATGAGCATGAGCAGCGACGAGCCGAGTACCTCCGCCTCCTACCCCTCTGG
TGCGATCGTTGCCGACGGCGAAGAGATTGCCGTCCCCTCGTGCGGTGAAA
GCGCCTCCCATGACGATCTCAGCAGGGCTTTCTGTAGTGTTTCGGTGGAG
GCGGGGCCAGTGGTGGAAGCTGTGATGACGGGGTCAGCGTCAGGAGGAGA
TGCTGGAGTGGAAGCAGCCGAGGCGGGGGCGTCTGTCTCGGAGGGCGCGT
GGGAGGCAACAGAGACGAGGACCGGCCCCGGTGCCAGGGGTGGGCAGGTT
GTGCGTGCGTGTGAGCTGAATCCGTCTTGTTCCATCTGCCTTTTTGAGTA
CTACCTGGACGAGGAGGTTACGCTTCTGCCGTGCGGGCACCTCTATCACA
CCGAGATGAGCATGAGCAGCGACGAGCCGAGTACCTCCGCCTCCTACCCC
TCTGGTGCGATCGTTGCCGACGGCGAAGAGATTGCCGTCCCCTCGTGCGG
TGAAAGCGCCTCCCATGACGATCTCAGCAGGGCTTTCTGTAGTGTTTCGG
TGGAGGCGGGGCCAGTGGTGGAAGCTGTGATGACGGGGTCAGCGTCAGGA
GGAGATGCTGGAGTGGAAGCAGCCGAGGCGGGGGCGTCTGTCTCGGAGGG
CGCGTGGGAGGCAACAGAGACGAGGACCGGCCCCGGTGCCAGGGGTGGGC
AGGTTGTGCGTGCGTGTGAGCTGAATCCGTCTTGTTCCATCTGCCTTTTT
GAGTACTACCTGGACGAGGAGGTTACGCTTCTGCCGTGCGGGCACCTCTA
TCACACCGAGTGTATCGACATATGGATGAGCGATCACGTGGACTGTCCGT
ACTGCCGTGCGGACATCAACGTCTGGGCAACCATTGGAGGCCACGCAGCG
GCAAACGGAGCCGGCGCAGGAAGCTCTCCCAACCGGGCGGGGCCCGAAAC
TGCCGCCGCTGTTTCCGGTAGAGTCTTTACCGCTCCTGTTTCAGCCGTCC
CCGCATCTGCCGGTGCCTCAACCACTATCCTCCGCGCGAGACCGGCATTA
CCAGTAGAGGTGGCGAGGGAGACCGACGCAGATTCGCGAGAAGTGTATCG
ACATATGGATGAGCGATCACGTGGACTGTCCGTACTGCCGTGCGGACATC
AACGTCTGGGCAACCATTGGAGGCCACGCAGCGGCAAACGGAGCCGGCGC
AGGAAGCTCTCCCAACCGGGCGGGGCCCGAAACTGCCGCCGCTGTTTCCG
GTAGAGTCTTTACCGCTCCTGTTTCAGCCGTCCCCGCATCTGCCGGTGCC
TCAACCACTATCCTCCGCGCGAGACCGGCATTACCAGTAGAGGTGGCGAG
GGAGACCGACGCAGATTCGCGAGAAGTTGATATCCCCCTCGCGGCCGGTT
GGCGATTCGGTTTGCCTGAAGGCTGCCGACCCATTGGATGGTGCTGCGAC
TTTGGTCACCCTTTTAGCGGTAGGCAAGCTCGAAGGCCGGCGCGGACCGC
ACATCTCTCGACACCCTGATTGATATCCCCCTCGCGGCCGGTTGGCGATT
CGGTTTGCCTGAAGGCTGCCGACCCATTGGATGGTGCTGCGACTTTGGTC
ACCCTTTTAGCGGTAGGCAAGCTCGAAGGCCGGCGCGGACCGCACATCTC
TCGACACCCTGA
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