mRNA_H-elongata_contig69581.14606.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig69581.14606.1 vs. uniprot
Match: D7FH74_ECTSI (Cyclin N-terminal domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH74_ECTSI) HSP 1 Score: 182 bits (463), Expect = 3.310e-54 Identity = 84/151 (55.63%), Postives = 115/151 (76.16%), Query Frame = 1
Query: 1 MAVPGQFCALRKVKKTLVPATVQEVYEFMKHFFVKTHISSECSVICLIYIERLMQVARVPLLESTWRPIIFCALLLASKMWQDVSCWNGEFSAVYPDYNVKRIDKLEMRFLEALGWDLNVSRTIYAKYYFYLRSKSGEITFRRRYKTLLQV 453
MA+PG LR+V+ TV E+YEF+K F K +SSECS++CLIY+ERLM+ ARVPLL TW+P++ C LLLASK+WQD+S WN EFS VYP+Y++K I++LE+ FL A+ WD+++S ++YAKYYF LRS + + FRRRY +LQ+
Sbjct: 152 MALPGVMFTLREVRSPPKAPTVDEIYEFIKTLFNKAQLSSECSLVCLIYVERLMETARVPLLPGTWKPVLLCGLLLASKVWQDLSSWNVEFSTVYPEYSLKNINRLELLFLGAMKWDMSISSSLYAKYYFALRSLTEKEDFRRRYNRVLQI 302
BLAST of mRNA_H-elongata_contig69581.14606.1 vs. uniprot
Match: A0A6H5JJI4_9PHAE (Cyclin N-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJI4_9PHAE) HSP 1 Score: 182 bits (462), Expect = 8.390e-52 Identity = 84/151 (55.63%), Postives = 115/151 (76.16%), Query Frame = 1
Query: 1 MAVPGQFCALRKVKKTLVPATVQEVYEFMKHFFVKTHISSECSVICLIYIERLMQVARVPLLESTWRPIIFCALLLASKMWQDVSCWNGEFSAVYPDYNVKRIDKLEMRFLEALGWDLNVSRTIYAKYYFYLRSKSGEITFRRRYKTLLQV 453
MA+PG LR+V+ TV E+YEF+K F K +SSECS++CLIY+ERLM+ ARVPLL TW+P++ C LLLASK+WQD+S WN EFS VYP+Y++K I++LE+ FL A+ WD+++S ++YAKYYF LRS + + FRRRY +LQ+
Sbjct: 400 MALPGVMFTLREVRSPPKAPTVDEIYEFIKTLFNKAQLSSECSLVCLIYVERLMETARVPLLPGTWKPVLLCGLLLASKVWQDLSSWNVEFSTVYPEYSLKSINRLELLFLGAMKWDMSISSSLYAKYYFALRSLTEKEDFRRRYNRVLQI 550
BLAST of mRNA_H-elongata_contig69581.14606.1 vs. uniprot
Match: A0A7S1G1W2_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G1W2_9STRA) HSP 1 Score: 158 bits (400), Expect = 7.970e-47 Identity = 69/131 (52.67%), Postives = 99/131 (75.57%), Query Frame = 1
Query: 61 TVQEVYEFMKHFFVKTHISSECSVICLIYIERLMQVARVPLLESTWRPIIFCALLLASKMWQDVSCWNGEFSAVYPDYNVKRIDKLEMRFLEALGWDLNVSRTIYAKYYFYLRSKSGEITFRRRYKTLLQV 453
T +E+Y F +H F K +S+ECS++CL+Y+ERLM+VA + LL + WRPI+ C +L+ASK+WQD+S WN EFS VYP Y++ +++LE FL+ L WDL +S ++YAKYYF LRS S + FRRRY +++ V
Sbjct: 10 TAEEIYNFARHLFTKAQLSAECSIVCLVYVERLMEVAGLLLLGTNWRPILLCGMLMASKVWQDLSSWNVEFSTVYPQYSLASVNRLERAFLQTLRWDLYISGSVYAKYYFALRSMSEKKNFRRRYISMMAV 140
BLAST of mRNA_H-elongata_contig69581.14606.1 vs. uniprot
Match: A0A1E7FWS6_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FWS6_9STRA) HSP 1 Score: 162 bits (411), Expect = 1.000e-46 Identity = 78/149 (52.35%), Postives = 106/149 (71.14%), Query Frame = 1
Query: 1 MAVPGQFCALRKVKKTLVPATVQEVYEFMKHFFVKTHISSECSVICLIYIERLMQVARVPLLESTWRPIIFCALLLASKMWQDVSCWNGEFSAVYPDYNVKRIDKLEMRFLEALGWDLNVSRTIYAKYYFYLRSKSGEITFRRRYKTLL 447
MA PG LRKV+ + E+Y+F + F +SSECS++CLIY+ERLM++A+VPLL TWRPI CALLLASK+WQD+S WN EFS+VYP ++++ I+KLE+ FL + WDL +S + YAKYYF LRS + FR+RY ++
Sbjct: 125 MARPGMVYGLRKVQVMYRIPSETEIYDFAQQLFQSVQLSSECSIVCLIYVERLMEIAKVPLLACTWRPIFMCALLLASKVWQDLSSWNIEFSSVYPQFSLESINKLELNFLRNVKWDLYISSSSYAKYYFALRSLVEKQDFRQRYNRMV 273
BLAST of mRNA_H-elongata_contig69581.14606.1 vs. uniprot
Match: A0A7S4J8M4_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J8M4_9STRA) HSP 1 Score: 167 bits (423), Expect = 3.880e-45 Identity = 79/149 (53.02%), Postives = 105/149 (70.47%), Query Frame = 1
Query: 1 MAVPGQFCALRKVKKTLVPATVQEVYEFMKHFFVKTHISSECSVICLIYIERLMQVARVPLLESTWRPIIFCALLLASKMWQDVSCWNGEFSAVYPDYNVKRIDKLEMRFLEALGWDLNVSRTIYAKYYFYLRSKSGEITFRRRYKTLL 447
MA PG LR++K T E+YEF F +SSECS++CLIYIERLM+VARVPL+ STWRP+ C LLLASK+WQD+S WN EF++VYP ++++ I++LE FL + WDL +S ++YAKYYF LRS + FRRRY ++
Sbjct: 926 MARPGAVYGLRRIKDDCSAPTTNEIYEFGHRLFKSVQLSSECSIVCLIYIERLMEVARVPLVSSTWRPVFMCGLLLASKVWQDLSSWNIEFASVYPQFSLEAINRLEATFLRTVKWDLYISSSLYAKYYFALRSLLEKQDFRRRYNRMV 1074
BLAST of mRNA_H-elongata_contig69581.14606.1 vs. uniprot
Match: A0A7S4AGI0_9STRA (Hypothetical protein n=2 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AGI0_9STRA) HSP 1 Score: 164 bits (416), Expect = 1.820e-44 Identity = 81/151 (53.64%), Postives = 105/151 (69.54%), Query Frame = 1
Query: 1 MAVPGQFCALRKVKKTLVPATVQEVYEFMKHFFVKTHISSECSVICLIYIERLMQVARVPLLESTWRPIIFCALLLASKMWQDVSCWNGEFSAVYPDYNVKRIDKLEMRFLEALGWDLNVSRTIYAKYYFYLRSKSGEITFRRRYKTLLQV 453
MA PG LRKVK T E+Y+F F +SSECS++CLIY+ERLM+VA+VPLL TWRPI C LLLASK+WQD+S WN EFS+VYP ++++ I+KLE+ FL + WDL +S + YAKYYF LRS + FR+RY ++ V
Sbjct: 574 MARPGMVYGLRKVKVHYKIPTETEIYDFGHQLFKSVQLSSECSIVCLIYVERLMEVAKVPLLACTWRPIFMCGLLLASKVWQDLSSWNIEFSSVYPQFSLEAINKLELNFLRHVKWDLYISSSCYAKYYFALRSLVEKQDFRQRYNRMVGV 724
BLAST of mRNA_H-elongata_contig69581.14606.1 vs. uniprot
Match: K0S4R6_THAOC (Cyclin N-terminal domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S4R6_THAOC) HSP 1 Score: 164 bits (416), Expect = 2.060e-44 Identity = 77/149 (51.68%), Postives = 106/149 (71.14%), Query Frame = 1
Query: 1 MAVPGQFCALRKVKKTLVPATVQEVYEFMKHFFVKTHISSECSVICLIYIERLMQVARVPLLESTWRPIIFCALLLASKMWQDVSCWNGEFSAVYPDYNVKRIDKLEMRFLEALGWDLNVSRTIYAKYYFYLRSKSGEITFRRRYKTLL 447
MA PG ++RK+K T E+YEF F K +SSECS++CLIY+E+LM+VA+VPL+ TWRPI C LLLASK+WQD+S WN EF++VYP +++ I+KLE+ FL+ + WDL +S ++YAKYYF LRS + FR RY ++
Sbjct: 599 MARPGVVYSMRKIKVVHTTPTTDEIYEFAHQLFKKVQLSSECSIVCLIYVEKLMEVAKVPLVAETWRPIFMCGLLLASKVWQDLSSWNIEFASVYPQFSLDAINKLEVLFLKHIKWDLYISSSLYAKYYFALRSLLEKSDFRSRYNGMV 747
BLAST of mRNA_H-elongata_contig69581.14606.1 vs. uniprot
Match: A0A7S3P0N5_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P0N5_9STRA) HSP 1 Score: 163 bits (413), Expect = 2.840e-44 Identity = 78/149 (52.35%), Postives = 105/149 (70.47%), Query Frame = 1
Query: 1 MAVPGQFCALRKVKKTLVPATVQEVYEFMKHFFVKTHISSECSVICLIYIERLMQVARVPLLESTWRPIIFCALLLASKMWQDVSCWNGEFSAVYPDYNVKRIDKLEMRFLEALGWDLNVSRTIYAKYYFYLRSKSGEITFRRRYKTLL 447
MA G L+KV+K + E+Y+F F +SSECS++CLIYIERLM+VA+VPLL STWRPI+ C LLLASK+WQD+S WN EF+ VYP Y++ I +LE++FL + WDL +S T+YAKYYF LR+ + FR+RY ++
Sbjct: 500 MARGGMVGGLKKVRKKHEIPSESEIYDFAHRLFKSVQLSSECSIVCLIYIERLMEVAKVPLLASTWRPIVMCGLLLASKVWQDLSSWNIEFATVYPQYSLNAIHRLELQFLRMVKWDLYISSTLYAKYYFALRALVSKQDFRQRYNRMV 648
BLAST of mRNA_H-elongata_contig69581.14606.1 vs. uniprot
Match: A0A024GT47_9STRA (Cyclin N-terminal domain-containing protein n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024GT47_9STRA) HSP 1 Score: 158 bits (399), Expect = 4.970e-44 Identity = 75/142 (52.82%), Postives = 99/142 (69.72%), Query Frame = 1
Query: 28 LRKVKKTLVPATVQEVYEFMKHFFVKTHISSECSVICLIYIERLMQVARVPLLESTWRPIIFCALLLASKMWQDVSCWNGEFSAVYPDYNVKRIDKLEMRFLEALGWDLNVSRTIYAKYYFYLRSKSGEITFRRRYKTLLQV 453
+ KV V+E++ F +H F K +S EC+++CLIYIERLM+ A VPLL +TW+PI+ C LLLASK+WQD+S WN EF+ +YP Y + I++LE FL + WDL VS T+YAKYYF LRS S + FRRRY +QV
Sbjct: 230 MEKVTSKAHVPNVEEIFRFCQHLFQKAQLSPECTIVCLIYIERLMEQADVPLLAATWKPIVLCGLLLASKVWQDLSSWNVEFNCIYPQYPLTCINRLERLFLNQIQWDLYVSATVYAKYYFALRSLSEKKDFRRRYNYTMQV 371
BLAST of mRNA_H-elongata_contig69581.14606.1 vs. uniprot
Match: A0A835YNR4_9STRA (Cyclin N-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNR4_9STRA) HSP 1 Score: 160 bits (405), Expect = 5.650e-44 Identity = 75/150 (50.00%), Postives = 110/150 (73.33%), Query Frame = 1
Query: 4 AVPGQFCALRKVKKTLVPATVQEVYEFMKHFFVKTHISSECSVICLIYIERLMQVARVPLLESTWRPIIFCALLLASKMWQDVSCWNGEFSAVYPDYNVKRIDKLEMRFLEALGWDLNVSRTIYAKYYFYLRSKSGEITFRRRYKTLLQV 453
A+P A+ KV+ +V+ +YEF++ F + +SSECS++CLIYIERLM+VA VPLL +TW+P++ C LLLASK+WQD+S WN EFS VYP+++++ I++LE +L + WDL +S ++YAKYYF LRS + FRRRY ++Q+
Sbjct: 338 ALPCSAFAMAKVETEPTAPSVEAIYEFIRTLFNRACLSSECSLVCLIYIERLMEVAAVPLLATTWKPVVLCGLLLASKVWQDLSSWNVEFSTVYPEFSLRSINRLEHVYLAQVQWDLYISASLYAKYYFALRSLAEGRDFRRRYNCVVQI 487 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig69581.14606.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig69581.14606.1 >prot_H-elongata_contig69581.14606.1 ID=prot_H-elongata_contig69581.14606.1|Name=mRNA_H-elongata_contig69581.14606.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=152bp MAVPGQFCALRKVKKTLVPATVQEVYEFMKHFFVKTHISSECSVICLIYIback to top mRNA from alignment at H-elongata_contig69581:1917..3034- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig69581.14606.1 ID=mRNA_H-elongata_contig69581.14606.1|Name=mRNA_H-elongata_contig69581.14606.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1118bp|location=Sequence derived from alignment at H-elongata_contig69581:1917..3034- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig69581:1917..3034- >mRNA_H-elongata_contig69581.14606.1 ID=mRNA_H-elongata_contig69581.14606.1|Name=mRNA_H-elongata_contig69581.14606.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=912bp|location=Sequence derived from alignment at H-elongata_contig69581:1917..3034- (Himanthalia elongata Himel1 dioecious)back to top |