mRNA_H-elongata_contig69458.14596.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig69458.14596.1
Unique NamemRNA_H-elongata_contig69458.14596.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig69458.14596.1 vs. uniprot
Match: A0A6H5JZ76_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JZ76_9PHAE)

HSP 1 Score: 271 bits (694), Expect = 1.190e-85
Identity = 130/158 (82.28%), Postives = 144/158 (91.14%), Query Frame = 1
Query:    1 CSMCFAQNITLSRDQYGVAYLPGFVGLNNLKSTDFVNVVLHSLAHIPPLRDFFVEPANYKDSKAPLVHAFGEVIRRVWSPSNFKSAVSPHEFIQAVSYASKKRFRPGIQSEAVDFLTWLLNSLHQGLGGTRKVGT-VIFQTFQGLVEVKTLTKKKVRV 471
            C     +N TLSRDQYGVAYLPGFVGLNNLK TDFVNVVLH+LAH+PPLR+FFVEP NYKDSK+ LVHAFGEV+RR+WSPSNFKSAVSPHEFIQAVSYASKKRFRPG+Q+EA+DFL WLLNSLHQGLGGTRK G+ V+FQTFQGLVEV+TLTKKK  +
Sbjct:  182 CIAALDKNTTLSRDQYGVAYLPGFVGLNNLKCTDFVNVVLHALAHVPPLRNFFVEPDNYKDSKSTLVHAFGEVVRRIWSPSNFKSAVSPHEFIQAVSYASKKRFRPGVQAEAIDFLAWLLNSLHQGLGGTRKAGSSVVFQTFQGLVEVETLTKKKATI 339          
BLAST of mRNA_H-elongata_contig69458.14596.1 vs. uniprot
Match: A0A835Z9Q1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9Q1_9STRA)

HSP 1 Score: 212 bits (539), Expect = 6.170e-64
Identity = 103/150 (68.67%), Postives = 125/150 (83.33%), Query Frame = 1
Query:   19 QNITLSRDQYGVAYLPGFVGLNNLKSTDFVNVVLHSLAHIPPLRDFFVEPANYKDSKAPLVHAFGEVIRRVWSPSNFKSAVSPHEFIQAVSYASKKRFRPGIQSEAVDFLTWLLNSLHQGLGGTRK--VGT-VIFQTFQGLVEVKTLTKK 459
            +N TL+RDQYGVAYLPGFVGLNNL STD++NV LH+LAH+ PLRDFF++P NY   K+PLV AFGEVIRR+WS  NFKSAVSPHEF+QAVS AS KRF  G Q+E +DF++WLLNSLH GLGG++K   GT +I +TFQGLV V T+T++
Sbjct:   91 RNTTLARDQYGVAYLPGFVGLNNLTSTDYLNVTLHALAHVAPLRDFFLDPTNYAGCKSPLVLAFGEVIRRLWSHDNFKSAVSPHEFLQAVSIASNKRFHVGQQAECIDFMSWLLNSLHVGLGGSKKKKAGTSIIHKTFQGLVHVHTMTRE 240          
BLAST of mRNA_H-elongata_contig69458.14596.1 vs. uniprot
Match: A0A7S2V118_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V118_9STRA)

HSP 1 Score: 190 bits (482), Expect = 2.960e-57
Identity = 103/200 (51.50%), Postives = 123/200 (61.50%), Query Frame = 1
Query:   19 QNITLSRDQYGVAYLPGFVGLNNLKSTDFVNVVLHSLAHIPPLRDFFVEPANYKDSKAPLVHAFGEVIRRVWSPSNFKSAVSPHEFIQAVSYASKKRFRPGIQSEAVDFLTWLLNSLHQGLGGTRKVG----------------------------------------------------TVIFQTFQGLVEVKTLTKKK 462
            QN TL+RD YGV+YLPGFVGLNNLKSTDFVNVVL +LAH+ PLRDFF++P NY  S++ LVH FGEV+R++WS  NFKS VSPHEF+Q V+ ASKKRFR G Q+E +DFL WLL+SLH GLGG  ++                                                     TVI Q FQG+V VKTLT+KK
Sbjct:  109 QNTTLARDVYGVSYLPGFVGLNNLKSTDFVNVVLQALAHVTPLRDFFLQPQNYHLSRSQLVHRFGEVMRKMWSKDNFKSCVSPHEFVQEVTVASKKRFRIGQQAECIDFLAWLLHSLHVGLGGHPRLEQAGVMDVEEXXXXXXXXXXXXXXXXXXXXXXXXXXXLRPEDLLGITPPAEGPTVIQQCFQGVVHVKTLTRKK 308          
BLAST of mRNA_H-elongata_contig69458.14596.1 vs. uniprot
Match: X5IAE6_9STRA (Ubiquitin specific peptidase 39 n=1 Tax=Ciliophrys infusionum TaxID=38824 RepID=X5IAE6_9STRA)

HSP 1 Score: 196 bits (497), Expect = 1.880e-56
Identity = 92/150 (61.33%), Postives = 117/150 (78.00%), Query Frame = 1
Query:   22 NITLSRDQYGVAYLPGFVGLNNLKSTDFVNVVLHSLAHIPPLRDFFVEPANYKDSKAPLVHAFGEVIRRVWSPSNFKSAVSPHEFIQAVSYASKKRFRPGIQSEAVDFLTWLLNSLHQGLGGTRKVGTVIFQTFQGLVEVKTLTKKKVRV 471
            N TL+RD +GV YLPGF+GLNNLK TD+VNVV+H+LAH+ PLRDFF+   NY++SK+ LVH FGE++R++WS  N+KS VSPHE +Q V+ ASK+RF  G QSE V+FL+WLLNSLH GLGGTRK  ++I + FQG V V T  +K   V
Sbjct:  194 NTTLARDIFGVTYLPGFIGLNNLKKTDYVNVVVHALAHVTPLRDFFLRSQNYENSKSQLVHRFGELMRKIWSKHNYKSCVSPHELVQEVTVASKRRFVIGKQSECVEFLSWLLNSLHFGLGGTRKDKSIIHEVFQGKVRVTTRQRKTAAV 343          
BLAST of mRNA_H-elongata_contig69458.14596.1 vs. uniprot
Match: A0A5D6Y3K6_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y3K6_9STRA)

HSP 1 Score: 189 bits (481), Expect = 5.980e-55
Identity = 90/153 (58.82%), Postives = 121/153 (79.08%), Query Frame = 1
Query:   19 QNITLSRDQYGVAYLPGFVGLNNLKSTDFVNVVLHSLAHIPPLRDFFVEPANY-KDSKAPLVHAFGEVIRRVWSPSNFKSAVSPHEFIQAVSYASKKRFRPGIQSEAVDFLTWLLNSLHQGLGGTRKVGTVIFQT-FQGLVEVKTLTKKKVRV 471
            QN  L++D +GV+YLPGF+GLNNLK+TD+VNVV+ +LAHIPPLRDFF++  +    S++ LVH FGE++R++WSP NFK+ +SPHEF+Q VS +SKKRF  G Q+E+V+FL+WLLN LH+GLGG+ K G+ I  T FQG VEV T+ + K  V
Sbjct:  126 QNRILAQDAFGVSYLPGFIGLNNLKNTDYVNVVVQALAHIPPLRDFFLQATDVVASSRSQLVHRFGELLRKMWSPHNFKNTISPHEFVQEVSVSSKKRFHVGTQNESVEFLSWLLNELHRGLGGSSKPGSSIVHTCFQGFVEVTTIDEAKAAV 278          
BLAST of mRNA_H-elongata_contig69458.14596.1 vs. uniprot
Match: A0A067BSI9_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BSI9_SAPPC)

HSP 1 Score: 187 bits (475), Expect = 3.850e-54
Identity = 87/149 (58.39%), Postives = 118/149 (79.19%), Query Frame = 1
Query:   22 NITLSRDQYGVAYLPGFVGLNNLKSTDFVNVVLHSLAHIPPLRDFFVEPANYK----DSKAPLVHAFGEVIRRVWSPSNFKSAVSPHEFIQAVSYASKKRFRPGIQSEAVDFLTWLLNSLHQGLGGTRKVGT-VIFQTFQGLVEVKTLT 453
            N  L++D +GV+YLPGF+GLNNLK TD+V+VVLH+LAH+PPLRD+F+EPANY      +K+ LV  FGE++R++WSP N K+ +SPHE +Q +S ASKKRF  G Q +A++FL+W LN LH+G+GGTRK G+ +I   FQG V+VKTL+
Sbjct:  127 NRKLAQDSFGVSYLPGFIGLNNLKKTDYVSVVLHALAHVPPLRDYFLEPANYMAAVAKTKSSLVVRFGEMMRKMWSPHNIKNTISPHEIVQEISVASKKRFHIGEQKDALEFLSWFLNELHRGVGGTRKQGSSIIHDVFQGTVQVKTLS 275          
BLAST of mRNA_H-elongata_contig69458.14596.1 vs. uniprot
Match: A0A7S3ZYB1_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZYB1_9STRA)

HSP 1 Score: 188 bits (477), Expect = 3.960e-54
Identity = 86/145 (59.31%), Postives = 113/145 (77.93%), Query Frame = 1
Query:   28 TLSRDQYGVAYLPGFVGLNNLKSTDFVNVVLHSLAHIPPLRDFFVEPANYKDSKAPLVHAFGEVIRRVWSPSNFKSAVSPHEFIQAVSYASKKRFRPGIQSEAVDFLTWLLNSLHQGLGGTRKVGT-VIFQTFQGLVEVKTLTKK 459
            TL+RD +GVAYLPGF GLNNLK TD++NVV+H LAH+ PLRDFF++P NYKD  +PLV  FG ++R++WS  NFKS VSPHE +Q V+ ASK RF+ G  ++A DFL WLLN LH+ LGGT++ G+ +I   FQG + V+TL++K
Sbjct:  192 TLARDVHGVAYLPGFCGLNNLKKTDYINVVVHQLAHVRPLRDFFLDPRNYKDRPSPLVREFGALLRKIWSRDNFKSVVSPHELVQEVTRASKLRFKIGTSADAADFLGWLLNQLHRDLGGTKRPGSSIIHDVFQGSIRVETLSRK 336          
BLAST of mRNA_H-elongata_contig69458.14596.1 vs. uniprot
Match: F0YC17_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YC17_AURAN)

HSP 1 Score: 189 bits (479), Expect = 1.510e-52
Identity = 89/145 (61.38%), Postives = 112/145 (77.24%), Query Frame = 1
Query:   28 TLSRDQYGVAYLPGFVGLNNLKSTDFVNVVLHSLAHIPPLRDFFVEPANYKDSKAPLVHAFGEVIRRVWSPSNFKSAVSPHEFIQAVSYASKKRFRPGIQSEAVDFLTWLLNSLHQGLGGTRKVGT-VIFQTFQGLVEVKTLTKK 459
            TL+RD +GVAYLPGF GLNNLK TD+VNVV+H+LAH+ PLRDFF+ P NY    APLVH FGE++R++WS  NFKS +SPHE +Q ++ ASK RF+ G  S+A DFL W LN LH+ LGGTRK G+ VI   FQG V V+TL+++
Sbjct:  139 TLARDVHGVAYLPGFCGLNNLKKTDYVNVVVHALAHVAPLRDFFLRPENYAHCPAPLVHKFGELLRKLWSRDNFKSVISPHELVQEITVASKLRFQIGETSDAADFLVWFLNELHRSLGGTRKRGSSVIHDAFQGDVRVETLSRR 283          
BLAST of mRNA_H-elongata_contig69458.14596.1 vs. uniprot
Match: A0A1V9Z9V5_9STRA (U4/U6.U5 tri-snRNP-associated protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z9V5_9STRA)

HSP 1 Score: 182 bits (463), Expect = 2.010e-52
Identity = 85/148 (57.43%), Postives = 114/148 (77.03%), Query Frame = 1
Query:   22 NITLSRDQYGVAYLPGFVGLNNLKSTDFVNVVLHSLAHIPPLRDFFVEPANYKDS----KAPLVHAFGEVIRRVWSPSNFKSAVSPHEFIQAVSYASKKRFRPGIQSEAVDFLTWLLNSLHQGLGGTRKVGT-VIFQTFQGLVEVKTL 450
            N  L++D +GV+YLPGFVGLNNLK TD+++VVLH+LAH+PPLRD+F+EP NY  +    K+ LV  FGE+IR++WSP N K+ +SPHE +Q +S ASKKRFR G Q + ++FL+W LN LH+G+GGT+  G+ +I Q FQG V V TL
Sbjct:  121 NKKLAQDSFGVSYLPGFVGLNNLKKTDYISVVLHALAHVPPLRDYFLEPVNYMPAVAKTKSVLVVRFGEMIRKMWSPHNIKNTISPHEIVQEISVASKKRFRIGEQKDGLEFLSWFLNELHRGIGGTKTPGSSIIHQVFQGTVRVNTL 268          
BLAST of mRNA_H-elongata_contig69458.14596.1 vs. uniprot
Match: A0A8K1FFF5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FFF5_PYTOL)

HSP 1 Score: 182 bits (462), Expect = 3.940e-52
Identity = 86/150 (57.33%), Postives = 119/150 (79.33%), Query Frame = 1
Query:   19 QNITLSRDQYGVAYLPGFVGLNNLKSTDFVNVVLHSLAHIPPLRDFFVEPAN-YKDSKAPLVHAFGEVIRRVWSPSNFKSAVSPHEFIQAVSYASKKRFRPGIQSEAVDFLTWLLNSLHQGLGGTRKVGT-VIFQTFQGLVEVKTLTKKK 462
            +N  L++D +GV+YLPGF+GLNNLK TD++NVV+ +LAH+PPLRDFF+  +N    SK+ LV  FGE++R++WSP NFK+ +SPHEF+Q VS +S KRF  G Q+E+V+FL+WLLN LH+GLGG+ K G+ +I + FQGL+EVKT  + K
Sbjct:  127 ENRLLAQDAFGVSYLPGFIGLNNLKHTDYINVVVQALAHVPPLRDFFLLSSNTVGKSKSSLVLRFGELLRKMWSPHNFKNTISPHEFVQEVSVSSNKRFHVGQQNESVEFLSWLLNELHRGLGGSHKRGSSIIHKCFQGLIEVKTTDETK 276          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig69458.14596.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JZ76_9PHAE1.190e-8582.28Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z9Q1_9STRA6.170e-6468.67Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2V118_9STRA2.960e-5751.50Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
X5IAE6_9STRA1.880e-5661.33Ubiquitin specific peptidase 39 n=1 Tax=Ciliophrys... [more]
A0A5D6Y3K6_9STRA5.980e-5558.82Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A067BSI9_SAPPC3.850e-5458.39Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A7S3ZYB1_9STRA3.960e-5459.31Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
F0YC17_AURAN1.510e-5261.38Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A1V9Z9V5_9STRA2.010e-5257.43U4/U6.U5 tri-snRNP-associated protein n=1 Tax=Achl... [more]
A0A8K1FFF5_PYTOL3.940e-5257.33Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig69458contigH-elongata_contig69458:207..3016 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score271.6
Seed ortholog evalue2.4e-70
Seed eggNOG ortholog2880.D8LCL6
Preferred nameUSP39
KEGG koko:K12847
KEGG Pathwayko03040,map03040
KEGG ModuleM00354
GOsGO:0000245,GO:0000375,GO:0000377,GO:0000398,GO:0003674,GO:0003824,GO:0004842,GO:0004843,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0006139,GO:0006396,GO:0006397,GO:0006464,GO:0006508,GO:0006511,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008234,GO:0008380,GO:0009056,GO:0009057,GO:0009987,GO:0010467,GO:0010498,GO:0016043,GO:0016070,GO:0016071,GO:0016567,GO:0016579,GO:0016740,GO:0016787,GO:0019538,GO:0019783,GO:0019787,GO:0019941,GO:0022607,GO:0022613,GO:0022618,GO:0030163,GO:0031146,GO:0031974,GO:0031981,GO:0032446,GO:0034622,GO:0034641,GO:0036211,GO:0036459,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043632,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045292,GO:0046483,GO:0051603,GO:0065003,GO:0070011,GO:0070013,GO:0070646,GO:0070647,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0101005,GO:0140096,GO:1901360,GO:1901564,GO:1901565,GO:1901575
EggNOG free text desc.spliceosomal complex assembly
EggNOG OGsKOG2026@1,KOG2026@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03041
Hectar predicted targeting categoryother localisation
Exons4
Model size477
Cds size471
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig69458.14596.1prot_H-elongata_contig69458.14596.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig69458 207..3010 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931092.5717218-CDS-H-elongata_contig69458:206..3081622931092.5717218-CDS-H-elongata_contig69458:206..308Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig69458 207..308 -
1691679694.7148328-CDS-H-elongata_contig69458:206..3081691679694.7148328-CDS-H-elongata_contig69458:206..308Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig69458 207..308 -
1622931092.5899978-CDS-H-elongata_contig69458:659..8361622931092.5899978-CDS-H-elongata_contig69458:659..836Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig69458 660..836 -
1691679694.728874-CDS-H-elongata_contig69458:659..8361691679694.728874-CDS-H-elongata_contig69458:659..836Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig69458 660..836 -
1622931092.608095-CDS-H-elongata_contig69458:1641..17281622931092.608095-CDS-H-elongata_contig69458:1641..1728Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig69458 1642..1728 -
1691679694.7380722-CDS-H-elongata_contig69458:1641..17281691679694.7380722-CDS-H-elongata_contig69458:1641..1728Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig69458 1642..1728 -
1622931092.6245918-CDS-H-elongata_contig69458:2905..30101622931092.6245918-CDS-H-elongata_contig69458:2905..3010Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig69458 2906..3010 -
1691679694.7487428-CDS-H-elongata_contig69458:2905..30101691679694.7487428-CDS-H-elongata_contig69458:2905..3010Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig69458 2906..3010 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931092.6396797-UTR-H-elongata_contig69458:3010..30161622931092.6396797-UTR-H-elongata_contig69458:3010..3016Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig69458 3011..3016 -
1691679694.757296-UTR-H-elongata_contig69458:3010..30161691679694.757296-UTR-H-elongata_contig69458:3010..3016Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig69458 3011..3016 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig69458.14596.1

>prot_H-elongata_contig69458.14596.1 ID=prot_H-elongata_contig69458.14596.1|Name=mRNA_H-elongata_contig69458.14596.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=157bp
MCFAQNITLSRDQYGVAYLPGFVGLNNLKSTDFVNVVLHSLAHIPPLRDF
FVEPANYKDSKAPLVHAFGEVIRRVWSPSNFKSAVSPHEFIQAVSYASKK
RFRPGIQSEAVDFLTWLLNSLHQGLGGTRKVGTVIFQTFQGLVEVKTLTK
KKVRVFD
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mRNA from alignment at H-elongata_contig69458:207..3016-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig69458.14596.1 ID=mRNA_H-elongata_contig69458.14596.1|Name=mRNA_H-elongata_contig69458.14596.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2810bp|location=Sequence derived from alignment at H-elongata_contig69458:207..3016- (Himanthalia elongata Himel1 dioecious)
TGTTCGATGTGCTTTGCGCAGAACATCACCCTCTCTAGGGATCAGTACGG CGTCGCCTACCTGCCCGGATTCGTCGGCCTCAATAACCTCAAGTCGACGG ACTTCGTGAACGTGAGATCAGGGGACGGACAAACGAACTAATTAACTAAC TAACCAGAGATCTAACTAACTGCCTCGCTAACTAGAGATATAATTAACTG ACTAACTAGAGATCTAACTGACTAACTAAAGCTAACTAGAGATCTAACTA GCTGACTAGCTAGAGCTAACGAGAGAGCTAACTGACTAACTAACTAGATA GCTAACTAACTAACTGACTAATTAGAAAGATAACTAGAGAAATAACTGAC TAACTAGAGCTAACTGACTAACTAACCAGAGATCTAAAACTAACTGAGTA ACTAAGAGTTTACTAGCGAAATAATTGACTAATTAACCAGATATATAATT AGTCGACTAACTAGAGTTAACTGACTGACTAACTAGAGCTAAGTAAAGGG ATAACTGGCTAATAAACTAGAGAGCTAACTAAATTCCGCATGCAGTTGTT GTTGTTGTTGTTGGTCACACATTTAGCAGAAGGTCAACCGTATTTGGTTG CCTTCTGCTCGTGGTCAGCTGAACAGGGAAAATAATTTTCCCCTGTCCCC GTAGCAGTAGAGGGTCGGTTAGGCCGCCAAGGACTCGAGGGGGATGGGAG GGATGGCATAGAATCGTGTTACCAGGCACCCAAGGACACACCTACCGACA TGAAAGCACGTACTGCATGCATGTTCGTGCTTTCGAAAACAAGAAATTAT TGTATATATTTATAGTTATCTTTAAAATAGCCAATGTACGTAAGTTAATC TAGACATTCCGTTTGGCCGCGTTCCTTTTTTGAATTCTAATATATCTGTA TAGCATATTATATACATTTATCGTGGTTGCCTCCTAACCCCTATGGAACT CGATCCGTTTTTTCTATACTAAATTCAATATAAACTTGAAATTCAATATA AAACTTGAAATTCAGTTTCAGCTCTGACCGTTACCCCCTTTTTCTATCGC CTCTCTCGCTAGTGGAAACCCTGCCCTTTTCTGTATCGCGATTTTATTTG TGCCCTTGCTCTCTCAATTATTGTGGCATTGTGGCCTTGCCTTTGAAAAC GCTCGGACCTTTCTCCTCCCCCACCCTGCCATATATTTTCTCTGCATTTT TTTTTTTACATTTTTGTCCAATTTGTAACCGTCGGGGATTTTTTTTGTAT TTTCGTCCTTTTCGTAATTATTTGTTTTTTGAGTAAAGGTGGTCCTGCAC TCGCTGGCGCACATCCCACCCCTTCGGGACTTTTTTGTGGAGCCCGCTAA CTACAAGGACAGCAAGGCCCCTCTGGTAAGCTCTCGGCTTCCCTGTCCTC TTAAGCTACTGTGCAATTCAGTACGACTGTGCGGTGTTTTTGGTTTTGAC AATAAAAGAAGAAAAAAAATGCAACAATTCCTTCCCCCACCTCCCTTCGA CTTTTTCTTTTAACCCTTTTGGAACTGAATTTCAAGTTTTATATTGAATT TAGCATAGAGAAAAATATATGCAGTTCTATAGGGGTTAAAATATTTTATA CTGAAAATCAGCTTCGACCATAAAATCAGGTTTCTTGGTTTGCAGGTTTA CGTTATAAATTTTATGTGTAGTAATGTTTGTGCTTTGGCGTGAGTCACAT CTCCCATTTTCGCGTCCTTTTCACTTTTTATGAGGAACCCAAATAGACAA TAATTGTAGTTTTCGCGTCGAAATTGATTCAATCAAGACATATATTCGTT GATCTAAACTTTGTTTCATTGACCCGATGCAAATGGTAAGGGATCAATTC AACACATACAGCCTCCGATACTGTCTGTGACTGTTATCGCACATTCCCAG TCGAACCATAGTGGGTGTGGGAAAAGAGAGGCGTACAATAGTTGGTCCAC GGGGTTGTTACCTGTACCTGAATAGTTTTGTTTTTTCCGAGGGTCAAATT CGATCGTGTTAAATAGCAGAATTGGATTTCATACCTCAAAAACCTGTTTC ATATCCAATCCGAGGCTCTTTTTCCAGTCCCTTAAAAGATGACTTTACTG TAAAAAATAAAATAACTAACTAACCAACGTAACCTTCCCCCTACCCACCT CCCATTGGCGACACCTCCTTAAACCCGCAGGTTCACGCTTTCGGCGAGGT CATTCGACGCGTGTGGTCTCCCAGCAACTTCAAGAGCGCGGTGTCCCCGC ACGAGTTCATCCAGGCGGTTTCCTACGCCTCCAAGAAGCGTTTCCGCCCC GGGATACAGTCGGAGGCGGTAGACTTTTTGACCTGGTTGCTCAATTCTCT CCACCAGGTGCAGGGTGTTTGTCCCCTTATGAAGGTTCTTTATATCCCTC TCGTTGCGAAGGTGGTAACGATTTGGCATAGGCAGGCGAAAACGGATAAA GGCAGGGTAGGGTAGGAAGAAGAAAAAATGTACACCACCCTTGCCAAAAA CGATTGGCCGTCGGTGATCGCTCCGCGAGAAGCGATGCATCATCTTTCCA ACGACGCGTGGTCCAAGGGTTTGGCAGCTATGAACTATTAATGACAGCTG AGGCACGCAAAGCTTGAGTGTGTGCCCCGCTCCGCACACGCCGTGTCATG CCTGATCCATGATGTGTCGGTGTTGGTGTGTTCTCTACGGCATGGCATGG CATGGCAGGGCCTGGGGGGCACACGGAAGGTCGGGACGGTAATATTTCAG ACGTTTCAGGGGCTGGTGGAGGTGAAAACGCTCACCAAGAAGAAGGTGCG CGTGTTTGAT
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Coding sequence (CDS) from alignment at H-elongata_contig69458:207..3016-

>mRNA_H-elongata_contig69458.14596.1 ID=mRNA_H-elongata_contig69458.14596.1|Name=mRNA_H-elongata_contig69458.14596.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=942bp|location=Sequence derived from alignment at H-elongata_contig69458:207..3016- (Himanthalia elongata Himel1 dioecious)
ATGTGCTTTGCGCAGAACATCACCCTCTCTAGGGATCAGTACGGCGTCGC
CTACCTGCCCGGATTCGTCGGCCTCAATAACCTCAAGTCGACGGACTTCG
TGAACATGTGCTTTGCGCAGAACATCACCCTCTCTAGGGATCAGTACGGC
GTCGCCTACCTGCCCGGATTCGTCGGCCTCAATAACCTCAAGTCGACGGA
CTTCGTGAACGTGGTCCTGCACTCGCTGGCGCACATCCCACCCCTTCGGG
ACTTTTTTGTGGAGCCCGCTAACTACAAGGACAGCAAGGCCCCTCTGGTG
GTCCTGCACTCGCTGGCGCACATCCCACCCCTTCGGGACTTTTTTGTGGA
GCCCGCTAACTACAAGGACAGCAAGGCCCCTCTGGTTCACGCTTTCGGCG
AGGTCATTCGACGCGTGTGGTCTCCCAGCAACTTCAAGAGCGCGGTGTCC
CCGCACGAGTTCATCCAGGCGGTTTCCTACGCCTCCAAGAAGCGTTTCCG
CCCCGGGATACAGTCGGAGGCGGTAGACTTTTTGACCTGGTTGCTCAATT
CTCTCCACCAGGTTCACGCTTTCGGCGAGGTCATTCGACGCGTGTGGTCT
CCCAGCAACTTCAAGAGCGCGGTGTCCCCGCACGAGTTCATCCAGGCGGT
TTCCTACGCCTCCAAGAAGCGTTTCCGCCCCGGGATACAGTCGGAGGCGG
TAGACTTTTTGACCTGGTTGCTCAATTCTCTCCACCAGGGCCTGGGGGGC
ACACGGAAGGTCGGGACGGTAATATTTCAGACGTTTCAGGGGCTGGTGGA
GGTGAAAACGCTCACCAAGAAGAAGGTGCGCGTGTTTGATGGCCTGGGGG
GCACACGGAAGGTCGGGACGGTAATATTTCAGACGTTTCAGGGGCTGGTG
GAGGTGAAAACGCTCACCAAGAAGAAGGTGCGCGTGTTTGAT
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