mRNA_H-elongata_contig68893.14529.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_H-elongata_contig68893.14529.1
Unique Name	mRNA_H-elongata_contig68893.14529.1
Type	mRNA
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)

Homology

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BLAST of mRNA_H-elongata_contig68893.14529.1 vs. uniprot
Match: D7FKB4_ECTSI (B30.2/SPRY domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKB4_ECTSI)

HSP 1 Score: 262 bits (669), Expect = 9.750e-78
Identity = 187/436 (42.89%), Postives = 217/436 (49.77%), Query Frame = 1

Query:   10 PRQRLGFRDSILGGDFRKLFQLIEEMPSGFDCSPL----VRSGDRGAVAAEAGE--EERKGWEXXXXXGGK--------------------------------------DVLAGDFWVKGVVREAMK-----------GRRRMRCVPGGWERGLLEQDEETGRGSGELVAVQVEYHGGIGVGNRCVRADLPLPSTVLRDRTSPGVRSHLASQLAASPLALFRWLLTKMASKTAMAAGRYATGAWGGSRAGGARGIDPAEALV-------EAVPRGAAFANNRLGNSSGIHAAGASAAA-------------AAGPGRRLVRAASMPGAWCRGVGGAHRGRGVREENLPRPLCFPVALSVNGGSVVDVTPRLVSYFEITIGSPRLEHPHSIPDCVAVGLSKSGFPLKNKMPGWDSRSYGYHSDDGGAFHDAGSMLFK 1092
            PR RL FRDSILG DFRKLF LIE+MP+GFDCS L      SG   A  A+A E  ++    E     G                                        +  AGDF ++GV R   K                                      G+ VA+QVE+ GG+GVGNRCVRADLPLPSTVLR+RT  G RS LA  L  SPLALFRWLL KMA+                + +GGA                  AV  G    +    N+    A G + AA             AA  G R  RA+S+P     G G +  G+   +  LPR LCFPVAL   G  VVDVTPRLVSYFE+TI +PRL+ PH IPDC+AVG+S+S FPLK KMPGWDSRSYGYHSDDGGAFHDAGSMLFK
Sbjct:  129 PRSRLHFRDSILGCDFRKLFPLIEQMPTGFDCSLLRGGSPASGANNADGADAQEPDDDNHQQEANNHEGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAPEEAEEKAGDFVIRGVRRRPAKRPLSPGVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGD-VALQVEFRGGLGVGNRCVRADLPLPSTVLRERTGAGARSSLARHLETSPLALFRWLLAKMAA----------------TASGGAXXXXXXXXXXXXXXXXXSAVHPGLVGDHQFQHNAQQQQAGGVAFAAPGAMLQAGLGQDGAAATGERRRRASSLPSGGPDGAGASGGGQHGEKPKLPRVLCFPVAL---GRGVVDVTPRLVSYFEVTIIAPRLDAPHPIPDCIAVGVSESRFPLKGKMPGWDSRSYGYHSDDGGAFHDAGSMLFK 544

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BLAST of mRNA_H-elongata_contig68893.14529.1 vs. uniprot
Match: A0A835ZEA9_9STRA (B30.2/SPRY domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEA9_9STRA)

HSP 1 Score: 134 bits (337), Expect = 9.450e-31
Identity = 113/350 (32.29%), Postives = 148/350 (42.29%), Query Frame = 1

Query:   43 LGGDFRKLFQLIEEMPSGFDCSPLVRSGDRGAVAAEAGEEERKGWEXXXXXGGKDVLAGDFWVKGVVREAMKGRRRMRCVPGGWERGLLEQDEETGRGSGELVAVQVEYHGGIGVGNRCVRADLPLPSTVLRDRTSPGVRSHLASQLAASPLALFRWLLTKMASKTAMAAGRYATGAWGGSRAGGARGIDPAEALVEAVPRGAAFANNRLGNSSGIHAAGASAAAAAGPGRRLVRAASMPGAWCRGVGGAHRGRGVREENLPRPLCFPVALSVNGGSVVDVTPRLVSYFEITIGSPRLEHPHSIPDCVAVGLSKSGFPLKNKMPGWDSRSYGYHSDDGGAFHDAGSMLFK 1092
            LG  F +L+ LIEE PSGF+CS L  +  R  + A+A EE  +                   VK   + A                           G+G   A+ VEY GG+G+GNRCVR D P PS  + +R S   RS      AA PLAL   LL     +   A G ++  A  G+          A AL+ A   GA+           +HAA                                          P P   P+  +      VD + R+VSYFE++I          +P+C+A+GLS+  F L+ KMPGWDS SYGYHSDDGGAFH+AGSMLF+
Sbjct: 1102 LGPHFLELYPLIEEYPSGFNCSALD-ADSRSTIHADADEEPVE-------------------VKTGAKSA---------------------------GAGTKTALLVEYTGGVGLGNRCVRTDAPFPSPRIWERRSLAARSARHGA-AAGPLALMYKLL-----RAVHAGGSHSAAATPGA-------ASAALALLGATTCGAS-----------VHAA---------------------------------------ATTPLPFSTPIWTAPG---TVDASARVVSYFEVSIAPRTGARGAGVPECIAIGLSEEQFTLQGKMPGWDSCSYGYHSDDGGAFHNAGSMLFR 1338

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BLAST of mRNA_H-elongata_contig68893.14529.1 vs. uniprot
Match: A0A7S1GNI7_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GNI7_CYCTE)

HSP 1 Score: 99.0 bits (245), Expect = 2.880e-19
Identity = 54/106 (50.94%), Postives = 65/106 (61.32%), Query Frame = 1

Query:  796 RGRGVREENLPRPLCFP-VALSVNGGSVVDVTPRLVSYFEITIGSPRLEHPHS---------IPDCVAVGLSKSGFPLKNKMPGWDSRSYGYHSDDGGAFHDAGSM 1083
            RGR  R+E  PRP   P V   V+   VVDV+PRLVSYFEITI       P+          + DCVA+G+S   F  +++MPGWDSRSYGYH DDGG FH +G M
Sbjct:  241 RGRQQRQEP-PRPFVSPFVTNDVDDDKVVDVSPRLVSYFEITILEDTPAFPNQPVVTPMDPQVADCVAIGVSTQEFSCQSRMPGWDSRSYGYHGDDGGIFHASGEM 345

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BLAST of mRNA_H-elongata_contig68893.14529.1 vs. uniprot
Match: A0A7S2JZ83_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JZ83_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 1.690e-18
Identity = 54/110 (49.09%), Postives = 62/110 (56.36%), Query Frame = 1

Query:  772 CRGVGGAHRGRGVREENLPRPLCFPVALSVNGGSVVDVTPRLVSYFEITIGSP-----RLEHPHSIPDCVAVGLSKSGFPLKNKMPGWDSRSYGYHSDDGGAFHDAGSML 1086
            CRG   A  G G    N  RP   P  +  NG   ++ TPRLV Y+E+T+  P     +   P    +CVAVGLS S FP   KMPGWDS SYGYHSDDGG FH  G ML
Sbjct:  243 CRGAKDASEGFGFTGPNAMRPFVAPYVMK-NGQ--LNCTPRLVVYYEVTLVPPTRNQSQAASPRRTTECVAVGLSTSNFPHYAKMPGWDSFSYGYHSDDGGIFHAQGDML 349

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BLAST of mRNA_H-elongata_contig68893.14529.1 vs. uniprot
Match: A0A1Z5JW83_FISSO (B30.2/SPRY domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JW83_FISSO)

HSP 1 Score: 84.3 bits (207), Expect = 3.050e-14
Identity = 44/110 (40.00%), Postives = 60/110 (54.55%), Query Frame = 1

Query:  811 REENLPRPLCFPVALSVNGGSVVDVTPRLVSYFEITIGSPRLE----------------HPHSIPDCVAVGLSKSGFPLKNKMPGWDSRSYGYHSDDGGAFHDAGSMLFK 1092
            RE    RP   P  L ++G   V +TPRL+SYFE++I SPR +                 P S  DC+ +G+    F   N+M GWD +S+GYHSDDGG +H+ G M+ K
Sbjct:  256 RERPFWRPFVAPF-LDMDG---VHLTPRLISYFEVSIESPREDVPAIPFRFTNHLNGPLRPRSEGDCIVIGVGTRKFHFSNRMAGWDDQSFGYHSDDGGVYHNQGQMIRK 361

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BLAST of mRNA_H-elongata_contig68893.14529.1 vs. uniprot
Match: A0A1Z5JU39_FISSO (B30.2/SPRY domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JU39_FISSO)

HSP 1 Score: 84.0 bits (206), Expect = 4.330e-14
Identity = 46/107 (42.99%), Postives = 61/107 (57.01%), Query Frame = 1

Query:  814 EENLP--RPLCFPVALSVNGGS-VVDVTPRLVSYFEITIGSPRLEHPHSIP-------------DCVAVGLSKSGFPLKNKMPGWDSRSYGYHSDDGGAFHDAGSML 1086
            EE+LP  RP   P    +  G  VV+++PRL+SYFE++I S  ++   S               +C AVGL+   F L ++MPGWDS S+GYH DDGG FH  G ML
Sbjct:  269 EEDLPEWRPFVSPFVTKMEEGRPVVNLSPRLISYFEVSIMSAPVDETTSNAARVLHHGFFRFEQECTAVGLANEYFALHSRMPGWDSCSFGYHGDDGGIFHKTGHML 375

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BLAST of mRNA_H-elongata_contig68893.14529.1 vs. uniprot
Match: A0A7S0PIR2_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0PIR2_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 2.050e-13
Identity = 39/80 (48.75%), Postives = 51/80 (63.75%), Query Frame = 1

Query:  877 VDVTPRLVSYFEITIGSPRLE----------HPHSIPDCVAVGLSKSGFPLKNKMPGWDSRSYGYHSDDGGAFHDAGSML 1086
            ++VTPRLV+Y+E+TI   R E             ++ DCVAVG++   F  K+KMPGWD+ SYGYH DDGG FH  G M+
Sbjct:  289 INVTPRLVAYYEVTIHEKRSEDGALGTNIISEEENLIDCVAVGIATDRFNEKHKMPGWDNFSYGYHGDDGGIFHARGDMV 368

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BLAST of mRNA_H-elongata_contig68893.14529.1 vs. uniprot
Match: A0A1Z5JU35_FISSO (B30.2/SPRY domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JU35_FISSO)

HSP 1 Score: 80.5 bits (197), Expect = 5.900e-13
Identity = 38/89 (42.70%), Postives = 53/89 (59.55%), Query Frame = 1

Query:  877 VDVTPRLVSYFEITIGSPRLEHPHSIP-----------------DCVAVGLSKSGFPLKNKMPGWDSRSYGYHSDDGGAFHDAGSMLFK 1092
            V +TPRL+SYFE++I SP+L+ P  IP                 DC+ +G+    F   N+M GWD +S+GYHSDDGG +H+ G M+ K
Sbjct:  276 VHLTPRLISYFEVSIESPQLDVPE-IPLRFANHWNGPRRPRLEGDCIVIGVGTRKFHFSNRMAGWDDQSFGYHSDDGGVYHNQGQMIRK 363

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BLAST of mRNA_H-elongata_contig68893.14529.1 vs. uniprot
Match: K0SCU3_THAOC (B30.2/SPRY domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SCU3_THAOC)

HSP 1 Score: 80.5 bits (197), Expect = 8.630e-13
Identity = 48/104 (46.15%), Postives = 58/104 (55.77%), Query Frame = 1

Query:  829 RPLCFPVALSVNGGS-VVDVTPRLVSYFEITI---------GSPRLE----------HPHSIP-DCVAVGLSKSGFPLKNKMPGWDSRSYGYHSDDGGAFHDAG 1077
            RP   P  LS  G S +VDVTPRLV+YFE+TI          +PR +          H   +  +CVAVGLS + F  ++ MPGWD  SYGYH DDGG FH  G
Sbjct:  524 RPFVAPTVLSDYGESLIVDVTPRLVAYFEVTIFPYQGDTIGTTPREDEGGVDNQEGQHVRRVRHECVAVGLSTAQFRDQSNMPGWDGNSYGYHGDDGGIFHGLG 627

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BLAST of mRNA_H-elongata_contig68893.14529.1 vs. uniprot
Match: A0A7S1YBN1_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YBN1_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 3.260e-12
Identity = 51/135 (37.78%), Postives = 60/135 (44.44%), Query Frame = 1

Query:  772 CRGVGGAHRGRGVREENLPRPLCFPVALSVNGGSVVDVTPRLVSYFEITIGSPRLEHPHSIPD------------------------------CVAVGLSKSGFPLKNKMPGWDSRSYGYHSDDGGAFHDAGSML 1086
            CRG  G   G G      P      VA  VN  S   +TPRLVSY+E++I    LE P ++ D                              CVAVGLS + F    +MPGWD  S+GYH DDGG FH  G ML
Sbjct:  346 CRGAAGVVGGNGKVSSTTPF-----VAPYVNARSKTILTPRLVSYYEVSI----LEKPTTVDDTEPPALVRARIMNDNXXXXXXXXXXRTAYDCVAVGLSTANFSTHGRMPGWDHLSWGYHGDDGGLFHGCGDML 471

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig68893.14529.1 vs. uniprot

BLAST of mRNA_H-elongata_contig68893.14529.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FKB4_ECTSI	9.750e-78	42.89	B30.2/SPRY domain-containing protein n=2 Tax=Ectoc...	[more]
A0A835ZEA9_9STRA	9.450e-31	32.29	B30.2/SPRY domain-containing protein n=1 Tax=Tribo...	[more]
A0A7S1GNI7_CYCTE	2.880e-19	50.94	Hypothetical protein n=1 Tax=Cyclophora tenuis Tax...	[more]
A0A7S2JZ83_9STRA	1.690e-18	49.09	Hypothetical protein n=1 Tax=Leptocylindrus danicu...	[more]
A0A1Z5JW83_FISSO	3.050e-14	40.00	B30.2/SPRY domain-containing protein n=1 Tax=Fistu...	[more]
A0A1Z5JU39_FISSO	4.330e-14	42.99	B30.2/SPRY domain-containing protein n=2 Tax=Fistu...	[more]
A0A7S0PIR2_9STRA	2.050e-13	48.75	Hypothetical protein n=1 Tax=Leptocylindrus aporus...	[more]
A0A1Z5JU35_FISSO	5.900e-13	42.70	B30.2/SPRY domain-containing protein n=1 Tax=Fistu...	[more]
K0SCU3_THAOC	8.630e-13	46.15	B30.2/SPRY domain-containing protein n=1 Tax=Thala...	[more]
A0A7S1YBN1_9STRA	3.260e-12	37.78	Hypothetical protein n=1 Tax=Grammatophora oceanic...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig68893	contig	H-elongata_contig68893:524..2517 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	263.8
Seed ortholog evalue	1.2e-67
Seed eggNOG ortholog	2880.D7FKB4
EggNOG free text desc.	protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway
EggNOG OGs	KOG1477@1,KOG1477@2759
COG Functional cat.	F
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
Hectar predicted targeting category	other localisation
Ec32 ortholog description	SPRY domain
Ec32 ortholog	Ec-05_005570.1
Exons	4
Model size	1095
Cds size	1095
Stop	1
Start	0

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig68893.14529.1	prot_H-elongata_contig68893.14529.1	Himanthalia elongata Himel1 dioecious	polypeptide	H-elongata_contig68893 524..2517 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622931085.0110226-CDS-H-elongata_contig68893:523..706	1622931085.0110226-CDS-H-elongata_contig68893:523..706	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig68893 524..706 -
1691679691.7796657-CDS-H-elongata_contig68893:523..706	1691679691.7796657-CDS-H-elongata_contig68893:523..706	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig68893 524..706 -
1622931085.0287952-CDS-H-elongata_contig68893:1213..1572	1622931085.0287952-CDS-H-elongata_contig68893:1213..1572	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig68893 1214..1572 -
1691679691.7931435-CDS-H-elongata_contig68893:1213..1572	1691679691.7931435-CDS-H-elongata_contig68893:1213..1572	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig68893 1214..1572 -
1622931085.0575938-CDS-H-elongata_contig68893:1719..1912	1622931085.0575938-CDS-H-elongata_contig68893:1719..1912	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig68893 1720..1912 -
1691679691.8050857-CDS-H-elongata_contig68893:1719..1912	1691679691.8050857-CDS-H-elongata_contig68893:1719..1912	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig68893 1720..1912 -
1622931085.1511757-CDS-H-elongata_contig68893:2157..2517	1622931085.1511757-CDS-H-elongata_contig68893:2157..2517	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig68893 2158..2517 -
1691679691.815783-CDS-H-elongata_contig68893:2157..2517	1691679691.815783-CDS-H-elongata_contig68893:2157..2517	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig68893 2158..2517 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at H-elongata_contig68893:524..2517-
coding sequence from alignment at H-elongata_contig68893:524..2517-

protein sequence of mRNA_H-elongata_contig68893.14529.1

>prot_H-elongata_contig68893.14529.1 ID=prot_H-elongata_contig68893.14529.1|Name=mRNA_H-elongata_contig68893.14529.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=365bp
IRRPRQRLGFRDSILGGDFRKLFQLIEEMPSGFDCSPLVRSGDRGAVAAE
AGEEERKGWEEEEEEGGKDVLAGDFWVKGVVREAMKGRRRMRCVPGGWER
GLLEQDEETGRGSGELVAVQVEYHGGIGVGNRCVRADLPLPSTVLRDRTS
PGVRSHLASQLAASPLALFRWLLTKMASKTAMAAGRYATGAWGGSRAGGA
RGIDPAEALVEAVPRGAAFANNRLGNSSGIHAAGASAAAAAGPGRRLVRA
ASMPGAWCRGVGGAHRGRGVREENLPRPLCFPVALSVNGGSVVDVTPRLV
SYFEITIGSPRLEHPHSIPDCVAVGLSKSGFPLKNKMPGWDSRSYGYHSD
DGGAFHDAGSMLFK*

mRNA from alignment at H-elongata_contig68893:524..2517-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_H-elongata_contig68893.14529.1 ID=mRNA_H-elongata_contig68893.14529.1|Name=mRNA_H-elongata_contig68893.14529.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1994bp|location=Sequence derived from alignment at H-elongata_contig68893:524..2517- (Himanthalia elongata Himel1 dioecious)
ATCCGCCGGCCGCGTCAACGACTGGGCTTCCGCGACTCCATCCTGGGCGG
CGACTTTCGCAAGCTGTTCCAGCTAATCGAGGAGATGCCGTCGGGCTTCG
ACTGCTCGCCGTTGGTCCGAAGCGGCGACCGCGGGGCGGTTGCGGCTGAG
GCAGGCGAAGAGGAAAGGAAGGGTTGGGAGGAGGAGGAGGAGGAGGGGGG
GAAGGATGTCTTGGCCGGGGATTTTTGGGTCAAGGGGGTGGTGAGGGAGG
CGATGAAAGGGCGGAGGCGGATGAGATGTGTCCCCGGAGGGTGGGAGCGG
GGTCTCTTGGAACAGGATGAGGAAACAGGACGTGGTTCGGGGGAGCTTGT
TGCCGTCCAGGTTCGTTCAAAAAGAAAAAGCAGCAGCCGCAGCATTGAAC
TGATCTATCTATCTAAGAGGGAAGGGGGGTACCGTATATAAATTATGTAT
GCGCACGAAAATATTTTGCTTGTGTGGTGATGGCAAGACGGCCCGAGAAA
AAAAAATAGGAAGGGGACGACGACTCGCCGTCTTTTTCCAAAACGCGAAG
GCTTGATTTCTTCTTCGTACACACACTGTTTTATGTATATATCCACAATT
TTCAGGTGGAGTACCACGGCGGAATCGGCGTCGGCAACCGCTGCGTGCGC
GCGGACCTTCCCCTGCCGAGCACCGTCCTCCGCGACCGGACGTCTCCCGG
CGTCAGGTCTCACCTCGCCAGCCAACTCGCCGCCTCTCCCTTAGCCCTTT
TCCGCTGGCTCCTGACGAAGATGGCGTCGAAGACGGCAATGGCGGCTGGT
GGCGGCATAGGAGGCCGGACACGGAGGACAGTAGGCGGTGGTGCCGCGTA
CAACCCCACCCCATCCTCGGCAGTGGTAGCTTCAGCTGCATTTGCGATCG
CTGCTGATACTGGCTTCGAAGCCGCAATCCTTGGGGCGGAAGAAGGAAGA
TACGCGACGGGCGCCTGGGGTGGGAGCCGAGCCGGTGGCGCGCGGGGTAT
TGACCCAGCGGAGGCGTTAGTAGAGGCAGTACCGCGTGGAGCAGCCTTCG
CGAACAACCGCCTTGGTAATTCTTCGGGGATTCATGCTGCTGGTGCTTCC
GCCGCTGCCGCTGCCGGCCCGGGCAGGCGTCTAGTGCGTGCGGCTTCGAT
GCCGGGCGCTTGGTGCCGTGGCGTTGGTGGTGCTCACCGAGGACGAGGGG
TTCGCGAGGAGAACTTGCCCCGGCCTTTGTGCTTTCCGGTTGCGTTGAGC
GTCAACGGTGGGAGTGTGGTTGACGTCACCCCCAGACTCGTTAGCTACTT
CGAGGTGAGTGGGTAGATGTGGGTGGGTGGGTGTCCGCGTGCATGCCGCG
TCACCTTGAGAAATGTACACGAGGGTCTTTTCACTGTAAGAACAAATCGT
TGAACTTGTAGTGTAAACGTGGACCGAGCATTATAGCGTGAGGAGGAAGG
GTGTCTCAGCCGTTGCGTAGGACATCTTTTAAGCGCCACCTGGCCCACTA
ACTGCTGCGGTTTGAAGTCAGCTCTGAAGAAGTAGCGCTGCTGCCCCATG
ATATTTTTTCCACCCTCCGCCTTCGGTTGGTCTGCCCTCTCCTTTTCCCC
TCAATGACACCGTCACCAACTTGACTGGAACTCCTTCATTCATTTTTAAC
TCCCTCCTGAAAAGTTGTTACCCCTCCCCCCTCTCTTTCCTTTAAAACCA
AATAGATACATTTCAACCTGCCTCCGCCCCAAGCAACAAGAAACAACAAA
ACCCCCCCAAGAAAATCCCTTCTTTTTTTACGCGCCTCCTGTTTTCGTTT
GTTTTTTTAAGATCACGATCGGCTCCCCGAGGTTGGAACACCCCCACTCC
ATCCCCGACTGTGTTGCCGTAGGGCTGAGCAAGTCGGGTTTCCCGCTAAA
GAACAAGATGCCCGGCTGGGATTCTCGTTCGTACGGCTACCACAGCGACG
ACGGGGGTGCTTTTCACGACGCCGGGAGCATGCTCTTTAAGTGA

Coding sequence (CDS) from alignment at H-elongata_contig68893:524..2517-

>mRNA_H-elongata_contig68893.14529.1 ID=mRNA_H-elongata_contig68893.14529.1|Name=mRNA_H-elongata_contig68893.14529.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2190bp|location=Sequence derived from alignment at H-elongata_contig68893:524..2517- (Himanthalia elongata Himel1 dioecious)
ATCCGCCGGCCGCGTCAACGACTGGGCTTCCGCGACTCCATCCTGGGCGG
CGACTTTCGCAAGCTGTTCCAGCTAATCGAGGAGATGCCGTCGGGCTTCG
ACTGCTCGCCGTTGGTCCGAAGCGGCGACCGCGGGGCGGTTGCGGCTGAG
GCAGGCGAAGAGGAAAGGAAGGGTTGGGAGGAGGAGGAGGAGGAGGGGGG
GAAGGATGTCTTGGCCGGGGATTTTTGGGTCAAGGGGGTGGTGAGGGAGG
CGATGAAAGGGCGGAGGCGGATGAGATGTGTCCCCGGAGGGTGGGAGCGG
GGTCTCTTGGAACAGGATGAGGAAACAGGACGTGGTTCGGGGGAGCTTGT
TGCCGTCCAGATCCGCCGGCCGCGTCAACGACTGGGCTTCCGCGACTCCA
TCCTGGGCGGCGACTTTCGCAAGCTGTTCCAGCTAATCGAGGAGATGCCG
TCGGGCTTCGACTGCTCGCCGTTGGTCCGAAGCGGCGACCGCGGGGCGGT
TGCGGCTGAGGCAGGCGAAGAGGAAAGGAAGGGTTGGGAGGAGGAGGAGG
AGGAGGGGGGGAAGGATGTCTTGGCCGGGGATTTTTGGGTCAAGGGGGTG
GTGAGGGAGGCGATGAAAGGGCGGAGGCGGATGAGATGTGTCCCCGGAGG
GTGGGAGCGGGGTCTCTTGGAACAGGATGAGGAAACAGGACGTGGTTCGG
GGGAGCTTGTTGCCGTCCAGGTGGAGTACCACGGCGGAATCGGCGTCGGC
AACCGCTGCGTGCGCGCGGACCTTCCCCTGCCGAGCACCGTCCTCCGCGA
CCGGACGTCTCCCGGCGTCAGGTCTCACCTCGCCAGCCAACTCGCCGCCT
CTCCCTTAGCCCTTTTCCGCTGGCTCCTGACGAAGATGGCGTCGAAGACG
GCAATGGCGGCTGGTGGAGTACCACGGCGGAATCGGCGTCGGCAACCGCT
GCGTGCGCGCGGACCTTCCCCTGCCGAGCACCGTCCTCCGCGACCGGACG
TCTCCCGGCGTCAGGTCTCACCTCGCCAGCCAACTCGCCGCCTCTCCCTT
AGCCCTTTTCCGCTGGCTCCTGACGAAGATGGCGTCGAAGACGGCAATGG
CGGCTGGAAGATACGCGACGGGCGCCTGGGGTGGGAGCCGAGCCGGTGGC
GCGCGGGGTATTGACCCAGCGGAGGCGTTAGTAGAGGCAGTACCGCGTGG
AGCAGCCTTCGCGAACAACCGCCTTGGTAATTCTTCGGGGATTCATGCTG
CTGGTGCTTCCGCCGCTGCCGCTGCCGGCCCGGGCAGGCGTCTAGTGCGT
GCGGCTTCGATGCCGGGCGCTTGGTGCCGTGGCGTTGGTGGTGCTCACCG
AGGACGAGGGGTTCGCGAGGAGAACTTGCCCCGGCCTTTGTGCTTTCCGG
TTGCGTTGAGCGTCAACGGTGGGAGTGTGGTTGACGTCACCCCCAGACTC
GTTAGCTACTTCGAGGAAGATACGCGACGGGCGCCTGGGGTGGGAGCCGA
GCCGGTGGCGCGCGGGGTATTGACCCAGCGGAGGCGTTAGTAGAGGCAGT
ACCGCGTGGAGCAGCCTTCGCGAACAACCGCCTTGGTAATTCTTCGGGGA
TTCATGCTGCTGGTGCTTCCGCCGCTGCCGCTGCCGGCCCGGGCAGGCGT
CTAGTGCGTGCGGCTTCGATGCCGGGCGCTTGGTGCCGTGGCGTTGGTGG
TGCTCACCGAGGACGAGGGGTTCGCGAGGAGAACTTGCCCCGGCCTTTGT
GCTTTCCGGTTGCGTTGAGCGTCAACGGTGGGAGTGTGGTTGACGTCACC
CCCAGACTCGTTAGCTACTTCGAGATCACGATCGGCTCCCCGAGGTTGGA
ACACCCCCACTCCATCCCCGACTGTGTTGCCGTAGGGCTGAGCAAGTCGG
GTTTCCCGCTAAAGAACAAGATGCCCGGCTGGGATTCTCGTTCGTACGGC
TACCACAGCGACGACGGGGGTGCTTTTCACGACGCCGGGAGCATGCTCTT
TAAGTGAATCACGATCGGCTCCCCGAGGTTGGAACACCCCCACTCCATCC
CCGACTGTGTTGCCGTAGGGCTGAGCAAGTCGGGTTTCCCGCTAAAGAAC
AAGATGCCCGGCTGGGATTCTCGTTCGTACGGCTACCACAGCGACGACGG
GGGTGCTTTTCACGACGCCGGGAGCATGCTCTTTAAGTGA