mRNA_H-elongata_contig6886.14525.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig6886.14525.1 vs. uniprot
Match: D7FTH1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTH1_ECTSI) HSP 1 Score: 785 bits (2028), Expect = 9.270e-264 Identity = 437/800 (54.62%), Postives = 565/800 (70.62%), Query Frame = 3
Query: 444 IATVIIDAPLYDTRLGNDGGCDPTGCTGGLTRDGNIVTEDSRWSCAPELGSSGSTCSITYSLSSSLFIDAINIAMYKGDERTRTIDAYVDGVIVTSWTSSGTTLDFEAVAL-GVTGTSIELRGVLENSEWLSIMEVEIMVVPNGSAPTSAXXXXX---------------TRVLEPVGLIPLAYTSSSTRARERYYAKDNDVSTSWTCD----DSTNSNGDCKLIFNLFWYRHIKQVKIALSNGADAAMDMKIGTAWYSDDPYEMFVESSGTTTDFETYEFDVFTNRIVVAG-YVTGDESIAIAEVEFIEEVFVGEMPVVAFATPYESGDGSLDTVTMNGFEWWSESDDALDEEVVFKLVKWSSLTRVDLQFPTGETYLFELHLYTEEDGANDPFTTFTGLESEDISEWQSFAVELDGDQTVTEVRLIMKGTGSGASGFYLLDARFIATTANNPTDTYRVGSPRIEEWPGTLYPEFVGEGRSDQEAIMGAICAVKKASFDGVDCVGEDDSATGTVTLPMGDYYVNGNIFMKSGVFLNGDSSIDDSPYTTEIYLEDGAAGNTDIDAIIVVDGVTDAVIGQIWIEGLYDPDTSDETSAVAGLGSTAISITNSQNIVYNDAWVGNMDGDCLVIRNSQMISIDAGPYDEEYKPSRIASNRGIGLLVDGSENVYIRRHSIYDNGEAGINIIGSTNFTFDATIGES--------EGDGYVGSLDGQQPIEVIVESSNRVTFQDMKVTSANEPVMTVSADSSDVFFNNCGFSSVDSGTCVIQTEDPSVVTAEDD-ELVLVDTCYVKV 2753
+ +V + A LYD L DGGCDP+GC TRDG++ SRWSCAP+LG CSI+Y L ++ +D + +AM+KG ER T++ VD +V +WTSSGTT FEA+ + G +G +E+ GVL++SEWLSI+E EIM++ +G++PT XXXX T L+PVGLIPLA T ++ E+Y+ KD D+STSWTC ++ + DC L FN+F +RHIKQVKIAL +GA+ A+DM+I A Y E+FV SSGTT FET+EFD FT+ + +AG + +G +SI+I+EVEF+EE+ GE+ VV F PY++GDG T + FEW SESD+A+D + F L ++ + V+LQFP GETY FEL LY D ++ +TFTGLES D WQ F + D VTEV +IMKGTGSGA GF L +ARF+ T +NP++T+ VGS +E W YP+FV EG DQ+AIMGAICAVKKASFDGVDCVG DD+ATG V++PMG+++V+GNIFMKSGV+L+ SIDDSPYTT+I LEDGAAG TD AIIV+DG++DA + ++WI G YD +TS++T AV GLGS +SIT S NI A V + DGD LV+R+S+M++IDAGPYDEEY+P I +RG G++VD S++V+IRR++ DNG AGI++ GS NFTF+ATI + EG+G VGSLDGQQPIEVIVESS V FQDMKV S N+PVMTVS SS V F+NCGFS+V+SGTCVIQT+ S VT DD EL L TCYVKV
Sbjct: 362 LGSVTVGASLYDPSLAVDGGCDPSGCVADNTRDGDLSAA-SRWSCAPKLGGE---CSISYDLGTAYDLDEVRLAMFKGTERQVTMEVRVDDALVITWTSSGTTDGFEAIDMSGTSGQVLEITGVLDDSEWLSIIEAEIMLLEDGASPTPTTXXXXXXXXXXXXXXXXXSTTGTLQPVGLIPLASTGGTSL--EKYHIKDGDMSTSWTCSGDPQEADDPYYDCILQFNMFSHRHIKQVKIALPDGAERAVDMRIA-APYDASFGEVFVTSSGTTDGFETFEFDYFTDVVSIAGVFTSGGQSISISEVEFVEEIQDGEVSVVDFDAPYDNGDGLWTGATTDAFEWSSESDEAMDRTLSFVLNSYALMEAVELQFPVGETYKFELTLY---DDGDEIVSTFTGLESVDSEGWQRFELGTI-DDPVTEVTIIMKGTGSGAPGFKLANARFLGTAIDNPSNTFYVGSTYVESWRSDRYPDFVAEGTGDQKAIMGAICAVKKASFDGVDCVGGDDAATGEVSMPMGEWFVDGNIFMKSGVYLDASFSIDDSPYTTDIILEDGAAGKTDTAAIIVMDGISDARLSEVWIYGHYDSETSNDTPAVDGLGSVGLSITGSTNITCRYASVYSSDGDALVVRDSEMVNIDAGPYDEEYRPWTIGQSRGTGIVVDSSDSVWIRRYTTSDNGIAGIHVSGSNNFTFEATIADECWTDDCVLEGEGNVGSLDGQQPIEVIVESSTLVKFQDMKVQSVNDPVMTVSG-SSGVSFDNCGFSNVESGTCVIQTDATSEVTTGDDPELSLDGTCYVKV 1149
BLAST of mRNA_H-elongata_contig6886.14525.1 vs. uniprot
Match: A0A6H5KH45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH45_9PHAE) HSP 1 Score: 755 bits (1950), Expect = 1.300e-254 Identity = 426/802 (53.12%), Postives = 553/802 (68.95%), Query Frame = 3
Query: 444 IATVIIDAPLYDTRLGNDGGCDPTGCTGGLTRDGNIVTEDSRWSCAPELGSSGSTCSITYSLSSSLFIDAINIAMYKGDERTRTIDAYVDGVIVTSWTSSGTTLDFEAVAL-GVTGTSIELRGVLENSEWLSIMEVEIMVVPNGSAPTSAXXXXX---------------TRVLEPVGLIPLAYTSSSTRARERYYAKDNDVSTSWTCD----DSTNSNGDCKLIFNLFWYRHIKQVKIALSNGADAAMDMKIGTAWYSDDPY--EMFVESSGTTTDFETYEFDVFTNRIVVAGYVTGD-ESIAIAEVEFIEEVFVGEMPVVAFATPYESGDGSLDTVTMNGFEWWSESDDALDEEVVFKLVKWSSLTRVDLQFPTGETYLFELHLYTEEDGANDPFTTFTGLESEDISEWQSFAVELDGDQTVTEVRLIMKGTGSGASGFYLLDARFIATTANNPTDTYRVGSPRIEEWPGTLYPEFVGEGRSDQEAIMGAICAVKKASFDGVDCVGEDDSATGTVTLPMGDYYVNGNIFMKSGVFLNGDSSIDDSPYTTEIYLEDGAAGNTDIDAIIVVDGVTDAVIGQIWIEGLYDPDTSDETSAVAGLGSTAISITNSQNIVYNDAWVGNMDGDCLVIRNSQMISIDAGPYDEEYKPSRIASNRGIGLLVDGSENVYIRRHSIYDNGEAGINIIGSTNFTFDATIGES--------EGDGYVGSLDGQQPIEVIVESSNRVTFQDMKVTSANEPVMTVSADSSDVFFNNCGFSSVDSGTCVIQTEDPSVVTAEDD-ELVLVDTCYVKV 2753
+ +V A YD RL DGGCDP+GC TRDG++ T SRWSCAP LG C+I+Y L ++ +D + +AM+KG ER ++ VD +VT+WTSSGTT FEA+ L G G +E+ GVL++SEWLSI+E EIMV+ +G++P XXX T L+PVGLIPLA T ++ ERY+ KD D+STSWTC ++ +++ DC L F++F +R+IKQVKIAL +GA+ A+DM+I + S+ E+FV SSGTT FETY+FD FTN + +AG T +SI+I+EVEF+EE+ GE+ VV F TPY GD T + F W SESD A+DE++ F L ++ + V+LQFP GETY FEL LY +ED + +TFTG ES D WQ F + D VTE+ ++MKGTGS A GF L +ARF T +NP+DT+ VGS + EW YP+FV EG DQ+AIMGAICAVKKASFDGVDCVG DD+ATG V++PMG+++V+GNIFMKSGV L+ SIDDSPYTT+I LEDGAAG TD A+IV+D +++A + WI G YD +TS++T V GLGS +SIT S NI DA V + DGD LV+R+SQMI+ID+GPYD++Y P I +RG G++VD S++V++RR++ YDNG AGI++ GS NFTF+ATI + EG+G VGSLDGQQPIEV+VESS V FQDMKV S N+PV+ VS SS V F+NCGFS+V++GTCVIQT+ S VT DD EL L TCYVKV
Sbjct: 175 LGSVTAGASFYDPRLAVDGGCDPSGCVVDNTRDGDLSTA-SRWSCAPTLGGE---CTISYDLGTAYDLDELRLAMFKGTERQVSMKVRVDDALVTTWTSSGTTDGFEAIDLSGTWGQVLEITGVLDDSEWLSIIEAEIMVLEDGASPMPTTPXXXXXXXXXXXXXXXTSTTGTLQPVGLIPLASTGGTSL--ERYHVKDGDMSTSWTCSGNPQETADTSYDCILQFSMFCHRNIKQVKIALPDGAERAVDMRIAAPYSSNSASFEEIFVTSSGTTDGFETYDFDHFTNYVSIAGVFTSSGQSISISEVEFVEEIQDGEVSVVDFETPYY-GDALWPGATTDAFVWASESDAAIDEKLSFVLKSYAVMEAVELQFPIGETYKFELTLYDDED---EIVSTFTGFESVDSEGWQRFELGTI-DDPVTEIAIVMKGTGSEAPGFKLANARFFGTAIDNPSDTFYVGSTYVTEWNSDRYPDFVAEGTGDQKAIMGAICAVKKASFDGVDCVGGDDAATGEVSMPMGEWFVDGNIFMKSGVHLHAWFSIDDSPYTTDIILEDGAAGKTDTAAMIVMDNISNARLSNTWIIGNYDSETSNDTPTVHGLGSVGLSITGSTNITCIDASVYSSDGDALVVRDSQMINIDSGPYDDDYLPWTIGQSRGTGIVVDSSDSVWVRRYTTYDNGVAGIHVSGSNNFTFEATIADKCWGEDCVLEGEGNVGSLDGQQPIEVVVESSTLVKFQDMKVQSVNDPVIVVSG-SSGVSFDNCGFSNVETGTCVIQTDTTSEVTTGDDPELSLDGTCYVKV 964
BLAST of mRNA_H-elongata_contig6886.14525.1 vs. uniprot
Match: A0A6H5KL74_9PHAE (F5/8 type C domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KL74_9PHAE) HSP 1 Score: 742 bits (1916), Expect = 5.940e-247 Identity = 412/794 (51.89%), Postives = 543/794 (68.39%), Query Frame = 3
Query: 444 IATVIIDAPLYDTRLGNDGGCDPTGCTGGLTRDGNIVTEDSRWSCAPELGSSGSTCSITYSLSSSLFIDAINIAMYKGDERTRTIDAYVDGVIVTSWTSSGTTLDFEAVALGVT--GTSIELRGVLENSEWLSIMEVEIMVVPN--------GSAPTSAXXXXXTRVLEPVGLIPLA-YTSSSTRARERYYAKDNDVSTSWTCDDSTNSNGDCKLIFNLFWYRHIKQVKIALSNGADAAMDMKIGTAWYSDDPY----EMFVESSGTTTDFETYEFDVFTNRIVVAG-YVTGDESIAIAEVEFIEEVFVGEMPVVAFATPYESGDGSLDTVTMNGFEWWSESDDALDEEVVFKLVKWSSLTRVDLQFPTGETYLFELHLYTEEDGANDPFTTFTGLESEDISEWQSFAVE--LDGDQTVTEVRLIMKGTGSGASGFYLLDARFIATTANNPTDTYRVGSPRIEEWPGTL--YPEFVGEGRSDQEAIMGAICAVKKASFDGVDCVGEDDSATGTVTLPMGDYYVNGNIFMKSGVFLNGDSSIDDSPYTTEIYLEDGAAGNTDIDAIIVVDGVTDAVIGQIWIEGLYDPDTSDETSAVAGLGSTAISITNSQNIVYNDAWVGNMDGDCLVIRNSQMISIDAGPYDEEYKPSRIASNRGIGLLVDGSENVYIRRHSIYDNGEAGINIIGSTNFTFDATIGESE--GDGYVGSLDGQQPIEVIVESSNRVTFQDMKVTSANEPVMTVSADSSDVFFNNCGFSSVDSGTCVIQTEDPSVVT--AEDDELVLVDTCYVKV 2753
I V A L+D L D GCDP+GCT GLTRDG+ T SRWSCAP+LG G +C+I+Y L + I +AMYKGDER T + VDGV+VT+WTSSGTT+ E++ T G +E+ GVL +SEWLSI+E I V P+ GS P A L VGL+PLA T +++KD D STSWTC T +C L F+LF +RHIKQVKIAL +GA+ A+DM+I Y D+ E +V SSGTT +FETY+FDVFTN I+++G + + ++I+I+EVEF+EE+ GE+ + + TP D +D T + F+W ++SDDA+ V F+L ++ + V+++FP G+TY F+L L ++ + T TG ES D ++WQSF + LD DQ +TE+ ++++GTGSGA GF +LD R + T +NPTDT VGS IE W G YP+FV EG DQ+ IM AIC VKKASFDGVDCVG DD+ATGTV LP G +YV+GNIFMKSGVFL+G S +DSPY T I LE+GAAG TDIDA++V+DG+++A+ IWI G YDPDTS++T AV GLGST +S+ S NI DA + +DGD LV+R+S MISIDAG Y+E Y P +AS+RG GL+VD +++Y+RRH++Y+NG AGI+I+G+ NFTFDATIGE G+G VG+LDGQQPI+VI+ESS VTF D++V S+N+P+M VS DSS V FNN G S V++ CVIQ +DPS VT A++DEL L +CYVKV
Sbjct: 373 IGAVTTTATLFDPSLLADNGCDPSGCTAGLTRDGDYATS-SRWSCAPKLGGDGDSCTISYDLGQVYNLAQIRLAMYKGDERQVTAEVRVDGVLVTTWTSSGTTVGAESILFSDTTSGQVVEVTGVLGDSEWLSIIETLIYVWPDTAPTPSTTGSTPAPAPITPVGE-LTAVGLLPLADCTGCFGEDLPPFHSKDGDFSTSWTCVGGT----ECTLRFDLFSWRHIKQVKIALPDGAERAVDMRIAGR-YDDELAAAFAEAYVTSSGTTDEFETYDFDVFTNEILISGVFTSASQTISISEVEFMEELQAGEIQISEWNTPL--ADARVDGPTTDAFDWTTDSDDAIGRTVEFELAWYAMVDAVEIKFPVGDTYKFDLEL-NDDQIRGEILKTITGFESADTADWQSFDLSQHLDADQFLTEINIVVQGTGSGAPGFAMLDIRVMGTAIDNPTDTVYVGSTFIERWTGLTDRYPDFVAEGTGDQKIIMEAICTVKKASFDGVDCVGGDDAATGTVVLPQGSWYVDGNIFMKSGVFLDGSFS-EDSPYFTGIILEEGAAGKTDIDAMVVMDGISNAMTDNIWIRGHYDPDTSNDTPAVPGLGSTGLSVVGSTNITLRDAEIRFLDGDALVVRDSNMISIDAGEYEELYSPWSLASSRGTGLIVDSCDSIYVRRHTLYENGVAGIHIVGTNNFTFDATIGEESTVGEGNVGNLDGQQPIDVIIESSTLVTFNDLRVQSSNDPIMMVS-DSSTVSFNNLGLSLVEADACVIQADDPSTVTIDADEDELTLDGSCYVKV 1154
BLAST of mRNA_H-elongata_contig6886.14525.1 vs. uniprot
Match: A0A6H5KFA6_9PHAE (F5/8 type C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KFA6_9PHAE) HSP 1 Score: 731 bits (1886), Expect = 2.260e-242 Identity = 410/813 (50.43%), Postives = 539/813 (66.30%), Query Frame = 3
Query: 426 LYNTRLIAT----VIIDAPLYDTRLGNDGGCDPTGCTGGLTRDGNIVTEDSRWSCAPELGSSGSTCSITYSLSSSLFIDAINIAMYKGDERTRTIDAYVDGVIVTSWTSSGTTLDFEAVALGVT--GTSIELRGVLENSEWLSIMEVEIMVVPNG-----SAPTSAXXXXXTRV-------------LEPVGLIPLAYTSSSTRARERYYAKDNDVSTSWTCD-DSTNSNGD------CKLIFNLFWYRHIKQVKIALSNGADAAMDMKIGTAWYSDDPYEMFVESSGTTTDFETYEFDVFTNRIVVAG-YVTGDESIAIAEVEFIEEVFVGEMPVVAFATPYESGDGSLDTVTMNGFEWWSESDDALDEEVVFKLVKWSSLTRVDLQFPTGETYLFELHLYTEEDGANDPFTTFTGLESEDISEWQSFAVELDGDQTVTEVRLIMKGTGSGASGFYLLDARFIATTANNPTDTYRVGSPRIEEWPGTLYPEFVGEGRSDQEAIMGAICAVKKASFDGVDCVGEDDSATGTVTLPMGDYYVNGNIFMKSGVFLNGDSSIDDSPYTTEIYLEDGAAGNTDIDAIIVVDGVTDAVIGQIWIEGLYDPDTSDETSAVAGLGSTAISITNSQNIVYNDAWVGNMDGDCLVIRNSQMISIDAGPYDEEYKPSRIASNRGIGLLVDGSENVYIRRHSIYDNGEAGINIIGSTNFTFDATIGE---SEGDGYVGSLDGQQPIEVIVESSNRVTFQDMKVTSANEPVMTVSADSSDVFFNNCGFSSVDSGTCVIQTEDPSVVT--AEDDELVLVDTCYVKV 2753
LY+ + I T V A L+D L D GCDP GCTG LTRDG++ T+ SRW+CAP LG C I+Y L +D + +A+Y GD R RTI+ +VDG +VT+WTSSGTT FE++AL T GT +EL+GVL++SEWLSI+E EIMV P AP + V L+PVGL PLA + S +RY KD D +TSWTC D T N + C+L F L +YRH+KQVK+AL++GA+ ++DM++ +S E FV SSGTT FETY+FD + I +A + + ESI+I+EVE +EEV GE P+ F+TPY++GDG + T +GFEW S S++A+D+ + L + ++T + L FP G+TY F++ L+ DG + +TT TGLES +Q VT + + MKGTGSGA GF +LDA + T +NP+DT+ VGS IE W G YP+FVG G DQ AI GAIC VKK ++DGV+CV DD+ATGTV L G YYVNGNIFM+SGV L G S DD P+TT+I LE+GA GNTDIDAI+V+DG+ DA I ++WI+G YDP+T D SAV+GLGS +S+ NSQNI + GD LV+R+S +++IDAG YDEEY P I + G GL+VD S+++++RR + Y+N AG++I+GS NFTF+ATI SEG+G VGS+DGQQPIEVIV +S+ VTFQDMKV S N+PVMT++ DS+ V F N G+S+V SGTC IQT+DPS VT A++DELVL TCYVKV
Sbjct: 360 LYSAKEIGTQDTTVTTTADLFDPDLAVDNGCDPAGCTGALTRDGDM-TDTSRWACAPSLGG---VCFISYDLGREFGLDEVRVALYNGDIRVRTINVFVDGALVTTWTSSGTTNGFESIALPDTASGTVVELQGVLDDSEWLSIIETEIMVWPQNVVTPPPAPAATVPPATAPVQPVTPPSPLPAADLQPVGLTPLAIGNESPL--DRYATKDGDFTTSWTCTGDPTEPNDEGITYYQCELFFGLVYYRHVKQVKVALADGAERSVDMRLAGR-FSSSIAEEFVTSSGTTNGFETYDFDYKASYIRIAAVFSSPGESISISEVEIMEEVVEGEAPIDIFSTPYDNGDGLWNEPTTDGFEWSSNSNEAIDQSLTLSLAGYHTVTELQLMFPEGDTYKFDVTLFNNLDGTGEAYTTITGLESXXXXXXXXXXXXXXANQYVTSIGIEMKGTGSGAPGFAMLDALVLGTKIDNPSDTFHVGSTFIEYWGGDGYPDFVGSGSGDQNAINGAICGVKKGTYDGVNCVDVDDTATGTVDLSWGAYYVNGNIFMQSGVLLLG-SFGDDDPHTTDIVLEEGAEGNTDIDAIVVMDGIRDAWIEKVWIQGNYDPET-DGISAVSGLGSACLSVVNSQNITCEGVDIRYCSGDALVVRDSTLVNIDAGRYDEEYLPWTIGLSGGTGLIVDTSDSIWVRRTTFYENAVAGLHIMGSNNFTFEATIASEEGSEGEGNVGSVDGQQPIEVIVGTSSLVTFQDMKVQSVNDPVMTIT-DSTTVSFTNGGYSNVPSGTCTIQTDDPSTVTIDADEDELVLEGTCYVKV 1162
BLAST of mRNA_H-elongata_contig6886.14525.1 vs. uniprot
Match: D7FZZ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZZ4_ECTSI) HSP 1 Score: 594 bits (1532), Expect = 2.460e-192 Identity = 364/797 (45.67%), Postives = 471/797 (59.10%), Query Frame = 3
Query: 450 TVIIDAPLYDTRLGNDGGCDPTGCTGGLTRDGNIVTEDSRWSCAPELGSSGSTCSITYSLSSSLFIDAINIAMYKGDERTRTIDAYVDGVIVTSWTSSGTTLDFEAVAL--GVTGTSIELRGVLENSEWLSIMEVEIMVVPNG-----------------SAPTSAXXXXXTRVLEPVGLIPLAYTSSSTRARERYYAKDNDVSTSWTCDDSTNSNG-------DCKLIFNLFWYRHIKQVKIALSNGADAAMDMKIGTAWYSDDPYEMFVESSGTTTDFETYEFDVFTNRIVVAG-YVTGDESIAIAEVEFIEEVFVGEMPVVAFATPYESGDGSLDTVTMNGFEWWSESDDALDEEVVFKLVKWSSLTRVDLQFPTGETYLFELHLYTEEDGANDPFTTFTGLESEDISEWQSFAVELDGDQTVTEVRLIMKGTGSGASGFYLLDARFIATTANNPTDTYRVGSPRIEEWPGTLYPEFVGEGRSDQEAIMGAICAVKKASFDGVDCVGEDDSATGTVTLPMGDYYVNGNIFMKSGVFLNGDSSIDDSPYTTEIYLEDGAAGNTDIDAIIVVDGVTDAVIGQIWIEGLYDPDTSDETSAVAGLGSTAISITNSQNIVYNDAWVGNMDGDCLVIRNSQMISIDAGPYDEEYKPSRIASNRGIGLLVDGSENVYIRRHSIYDNGEAGINIIGSTNFTFDATIGESEGDGYVGSLDGQQPIEVIVESSNRVTFQDMKVTSANEPVMTVSADSSDVFFNNCGFSSVDSGTCVIQTEDPSVVTAE--DDELVLVDTCYVKV 2753
TV A L+D L D GCDP GCT LTRDG+ + SRWSCA LG G+ CSI+Y L +D + +A+Y GD R RTID VDGV+V +WTSSGTT FE++A GV+GT I L+GVL++SEWLSI+E EIMV P T++ L+PVGLIPLA S +R AKD D+STSWTC +C L+F+L + RHIKQVKIAL++GA+ A+DM I Y P E+ V SSGTT ETY+ D T+ + ++G + + +SI+I+EVEF+EEV GE+ L+T + ++W FEL L+ G ++P+ T TGLE +E+QS + Q VT + + ++G SG S F L+DAR + T +NPTDT+ VGS I EW G P+FVG+G DQ AI AICAVKK ++DGVDCVG DDSATGTV L G+Y+V+GNIFMKSGVFL G DDSPY +I+LE+GA GNTD+DA+IV+DG++DA IG +WI GLYDPDTS+++ AV GLGST +SI +SQNI D WV DGD +V+R+S +++IDAG YDE YK + G + + + IY +GS G VGSL+GQQPIEVIVE S+ + FQ+M V S N+PVMT+S DS+ V F N G SV SGTC+IQT+DPS VT + +DEL+L TCYVKV
Sbjct: 250 TVTTTADLFDPALAIDNGCDPAGCTAALTRDGD-TGDASRWSCATNLGGEGAVCSISYDLGREFGLDELRVALYNGDIRVRTIDVSVDGVLVATWTSSGTTDGFESIAFPDGVSGTVINLQGVLDDSEWLSIIETEIMVWPQNVVTPPPTPATTAXXXXXQPATTSPIPTPVGDLQPVGLIPLATGDGSLL--DRCAAKDGDLSTSWTCTGDPREVSPQGILYYECSLLFDLVYTRHIKQVKIALADGAERAVDMSISRG-YGTTPEEL-VTSSGTTDGLETYDVDYRTSSVRISGDFSSPGQSISISEVEFVEEVVDGEV--------------LLETSYFDDYDW-----------------------------------NFELSLFNRIGGTDEPYATLTGLEITGTAEYQSIDLTGFAGQYVTSIAVHVEG--SGGSEFPLIDARILGTKIDNPTDTFYVGSTFIPEWYGHGDPDFVGQGTGDQNAINAAICAVKKGTYDGVDCVGMDDSATGTVVLAFGEYHVDGNIFMKSGVFLKGRYRFDDSPYNIDIFLEEGAPGNTDVDAMIVMDGISDARIGDLWIHGLYDPDTSNDSPAVPGLGSTGVSIVDSQNITCADTWVDFCDGDAMVVRSSSVVNIDAGYYDE-YKAT------GWRVCTSWTPTTLPSKPPIY---------VGSQ--------------GQVGSLEGQQPIEVIVEGSSLINFQEMWVRSVNDPVMTIS-DSTAVSFTNDGSYSVASGTCIIQTDDPSTVTIDPDEDELILEGTCYVKV 959
BLAST of mRNA_H-elongata_contig6886.14525.1 vs. uniprot
Match: D7FUI8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUI8_ECTSI) HSP 1 Score: 238 bits (607), Expect = 9.640e-65 Identity = 199/573 (34.73%), Postives = 280/573 (48.87%), Query Frame = 3
Query: 1134 MKIG---TAWYSDDPYEMFVESSGTTTDFETYEFDVFTNRIVVAGYVTGDESIAIAEVEFIEEVFVGEMPVVAFATPYESGDGSLDTVTMNGFEWWSESDDALDEEVVFKLVKWSSLTRVDLQFPTGETYLFELHLYTEEDGANDPFTTFTGLESEDISEWQSFAVELDGDQTVTEVRLIMKGTGSGASGFYLLDARFIATTANNPTDTYRVGSPRIEEWPGTLYPEFVGEGRSDQEAIMGAICAVKKASFDGVDCVGEDDSATGTVTLPMGDYYVNGNIFMKSGVFLNGDSS-----IDDSPYTT-EIYLEDGAAGNTDIDAIIVVDGVTDAVIGQIWIEGLYDPDTSDETSAVAGLGSTAISITNS------------QNIVYNDAWVGNMDGDCLVIRNSQMISIDAGPYDE-------EY--KPSRIASNRGIGLLVDGSENVYIRRHSIYDNGEAGINIIGSTNFTFDATIGES-EGDGYVGSLDGQQPIEVIVESSNRVTFQDMKVTSANEPVMTVSADSSDVFFNNCGFSSVDSGTCVIQTEDPSVVT--AEDDELVLVDTCYVKV 2753
M++G T+W + E FV SSGTT FETY+FD + + +A + EFI + E P T +GFEW S+S++A+ + L + ++ E H G +D F QSF + DQ VT + + MKGTGSGA GF +LD + +NP+DT+ VGS IE W G P+FVG G DQ AI GAICAVKK +FDGVDC+ D++ATGTV L +V + S L SS +D ++ + + + ID + + + D V+ ++ L + + ++++ L ++ + S QN+ + GD LV+R+S ++SIDAG YDE +Y KP + +R +GL + +V +R G G F + EG G VGS+DGQQPIEVIVESS+ V FQD V S N+PVMT++ DS+ V F N G+S+V SGTC IQ +DPS VT A++DELVL TCYVKV
Sbjct: 1 MRLGGRFTSWIA----EEFVMSSGTTDGFETYDFDYKASSVRIAAVFSSPG-------EFIS---ISEEP------------------TTDGFEWSSDSNEAISRTLFLSLAGY---------------FMAERHGR----GVHDHHAGF-----------QSFDLTGFADQYVTSIGIEMKGTGSGAPGFAVLDPMVLGAKIDNPSDTFYVGSTFIEFWSGNGLPDFVGTGSGDQNAINGAICAVKKGTFDGVDCIDMDETATGTVDLS----WVRTSWTATSSCSLAFSSSANRRRVDPRELSSRDRHRQQSRRIWPRIDLPLGCE-LPDFVVARLT---LMEMPVTAFSASLHSLPKASLCLVPSVPPLHRSMPNTLQNVTCEGVDIRYCSGDALVVRDSTLVSIDAGRYDEHEGVPSVDYRPKPRHRSDSRHVGLRLSSPAHVTRQRRG-------GSPHHGLEQFYLRSNHRRGPEGAGNVGSVDGQQPIEVIVESSSLVKFQDKPVQSVNDPVMTIT-DSTTVSFTNGGYSNVPSGTCTIQADDPSTVTIDADEDELVLEGTCYVKV 495
BLAST of mRNA_H-elongata_contig6886.14525.1 vs. uniprot
Match: D7FL48_ECTSI (Leucine rich repeat carbohydrate binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL48_ECTSI) HSP 1 Score: 161 bits (408), Expect = 5.440e-38 Identity = 119/324 (36.73%), Postives = 169/324 (52.16%), Query Frame = 3
Query: 453 VIIDAPLYDTRLGNDGGCDPTGCTGGLTRDGNIVTEDSRWSCAPELGSSGSTCSITYSLSSSLFIDAINIAMYKGDERTRTIDAYVDGVIVTSWTSSGTTLDFEAVALGVTGTSIELRGVLENSEWLSIMEVEIMVVPNGSAP-------------TSAXXXXXTRVLEPVGLIPLAYTSSSTRARERYYAKDNDVS--TSWTCDDSTNSNGDCKLIFNLFWYRHIKQVKIALSNG------ADAAMDMKIGTAWYSDDPYEMFVESSGTTTDFETYEFDVFTNRIV-VAGYVTGD-ESIAIAEVEFIEEVFVGEMPVVAFATP 1355
V +AP++D R GC P GC G TRDG I +++SRWSCAP L SS S C+ITY+L ++A+ IA+Y+GD RTRTID VDG SWTSSGTT DFE++ LGV G +EL G L++ EWLSI+EVEI+V T+ R+ + VG P T++ TR D D+S + W+C + G C + ++L I ++++A+ G A+D + T W SSGTT+ FE+ + T ++V + G D E ++I E E + V+ G P + TP
Sbjct: 34 VTTEAPVFDDRATLPYGCPPAGCVGANTRDG-ITSDESRWSCAPSLDSSDSGCTITYTLEDEQHLEALKIALYQGDTRTRTIDISVDGNYAFSWTSSGTTSDFESIDLGVDGKVVELVGDLQDWEWLSILEVEILVDDGDDGSEVDVVEAGELGTVTATADLYDDRLGDTVGCDPEGCTAALTR--------DGDMSEDSRWSC--APELGGLCSISYDLGAEYSIDELQLAMYQGDTRVRTVGVAVDGDLVTTW----------TSSGTTSGFESVDMSGATGQVVTITGAELSDSEWLSIVETEIM--VYNGVAPPPSPTTP 334
BLAST of mRNA_H-elongata_contig6886.14525.1 vs. uniprot
Match: A0A6H5L1V3_9PHAE (F5/8 type C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L1V3_9PHAE) HSP 1 Score: 159 bits (401), Expect = 4.660e-37 Identity = 116/336 (34.52%), Postives = 173/336 (51.49%), Query Frame = 3
Query: 429 YNTRLIATVIIDAPLYDTRLGNDGGCDPTGCTGGLTRDGNIVTEDSRWSCAPELGSSGSTCSITYSLSSSLFIDAINIAMYKGDERTRTIDAYVDGVIVTSWTSSGTTLDFEAVALGVTGTSIELRGVLENSEWLSIMEVEIMV-----------------VPNGSAPTSAXXXXXTRVLEPVGLIPLAYTSSSTRARERYYAKDNDVS--TSWTCDDSTNSNGDCKLIFNLFWYRHIKQVKIALSNG------ADAAMDMKIGTAWYSDDPYEMFVESSGTTTDFETYEFDVFTNRIV-VAGYVTGDES-IAIAEVEFIEEVFVGEMPVVAFATP 1355
Y + +V +A ++DTR GC P GC TRDG++ +++SRWSC P L +SGS CSIT++L ++ I IA+YKGD RTRTID YVDG +T+WTSSGTT FE+V L G +EL G L + EWLSI+EVEI V T+ TR+ + VG P T++ TR D D+S + W+C + G C + ++L +++Q+++ + G D ++D + T W SSGTTT+FE+ + ++V ++G D ++I E E + V+ G+ P + TP
Sbjct: 25 YEAGTVMSVTPEASVFDTRSTLPYGCPPDGCVAANTRDGDM-SDESRWSCRPSLDASGSGCSITFTLEKVEYLGDIRIALYKGDTRTRTIDMYVDGRHITTWTSSGTTTGFESVLLMDQGQVVELVGDLNDDEWLSILEVEIDVDDGIVDDDTVVVLDVVEAAEMGTVTATADLYDTRLGDTVGCDPEGCTAALTR--------DGDMSEGSRWSC--APKLGGPCSISYDLGAEYNVEQLRLRMYRGDSRTRTVDVSVDGALVTTW----------TSSGTTTEFESVDLSGAYGQVVTISGSNQADSQWLSIIETEIM--VYEGDAPAPSPTTP 337
BLAST of mRNA_H-elongata_contig6886.14525.1 vs. uniprot
Match: D7FSQ6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSQ6_ECTSI) HSP 1 Score: 160 bits (405), Expect = 2.650e-36 Identity = 191/781 (24.46%), Postives = 330/781 (42.25%), Query Frame = 3
Query: 531 LTRDGNIVTEDSRWSCAPELGSSGSTCSITYSLSSSLFIDAINIAMYKGDERTRTIDAYVDGVI-VTSWTSSGTTLDFEAVALGVTGTSIELRGVLENSEWLSIMEVEIMVVPNGSAPTSAXXXXXTRV-------------LEPVGLIPLAYTSSST---------------------RARERYYAKDNDVS--TSWTCD-----DSTNSNGDCKLIFNLFWYRHIKQVKIALSNGADAAMDMKIGTAWYSDDPYEMFVESSGTTTDFETYEFDVFTNRI-VVAGYVTGDESIAIAEVEFIEEVFVG----EMPVVAFATPYESGDGSLDTVTMNGFEWWSESDDALDEEVVFKL----------VKWSSLTRVDLQFPTGETYLFELHLYTEEDGANDPFTTFTGLESEDISEWQSFAVELDGDQTVTEVRLIMKGTGSGASGF---YLLDARFIATTANNPTDTYRVGSPRIEEWPGTLYPEFVGEGRSDQEAIMGAICAVKKASFDGVDCVGEDDSATGTVTLPMGDYYVNGNIFMKSGVFLNGDSSIDDSPYTTEIYLEDGAAGNTDIDAIIVVDGVTDAVIGQIWIEGLYDPDTSDETSAVAGLGSTAISITNSQNIVYNDAWVGNMDGDCLVIRNSQMISIDAGPYDEEYKPSRIASNRGIGLLVDGSENVYIRRHSIYDNGEAGINIIGSTNFTFD---ATIGESEGDGYVGSLDGQQPIEVIVE-SSNRVTFQDMKVTSANEPVMTVSADSSDVFFNNC-GFSSVDSGTCVI 2678
LT DG+ T+ S W+C SS C ITY L + + + IA + ++ G V S+ SG L+ LG G GVL + + V I VP+G RV L+P G++PLA + S+ YY KD D+S + WTC + ++N DC L+ +L ++R+++Q++ A G + + I T S SSG +TD++T++ +V TN I +V + D+ I I E+ +E +G +PV ++ + GDG D + +SD+ + F + V S++T V L+FP+ ++F + Y E + + FT D E + + D ++ V + + T + ++D + + +P + V + + W + P+ +G+G SDQE IM IC K +FDG DCVGE D ++ +++ G Y+++G +F+KSGV L+G + P T + L + DA+IV+DGVT + ++IE P T D T LG+ + + SQ++ + +S+ IS+ D EY+ + VDG ++ + AG+ I S N + + E ++ G Q V++ +S+ + FQD + + + + + + +N G+ + +SG C+I
Sbjct: 216 LTLDGD-ATDGSSWACL----SSEGACEITYDLQAVESLQQLRIAFSTNTDAGAKLNVLAAGESGVFSYVRSG--LEAGGRPLGSDGLQT-FGGVLALARY-----VRIEAVPSGEGGAIVINEVELRVGDAPVRPVSEKAWLQPTGMLPLAADTGSSGHPNFDNREPSAGGCDSPAHFEGCHVYYIKDGDMSDDSRWTCGPLAAGNLVSNNEDCHLMLSLNYFRYVRQIQFAFHMGDEQYNEFSIETVVSS-------AISSGDSTDYQTFDIEVHTNEIRLVPVFQRVDQWIGIKEMVILETKEMGFINGTLPVFDYSYWFPRGDGGDDDSS-------GDSDEDVPTRFEFHMPRPEDYFQFRVPPSTVTAVKLRFPSDRQFVFRVS-YDEIETDEEIVEEFTSAGGPDTMETFTLSAPADVERFVY-ITAVSGPTFESQPDYPTLRVIDFQIVGEIKKDPGH-FEVVTTTMTVW--RVVPDIIGDGVSDQEEIMTTICETKGGAFDGTDCVGELDDSSVHISMKNGHYFLDGPVFLKSGVTLSGGDYSYNEPSRTYLVLHNHTRLE---DAVIVIDGVTGGEVDSVYIEH-QTPMTGDITPGT--LGNLCLEVRGSQDLKLAEIDCHQARTGAARFVDSKNISVSV-IRDGEYETGNF-------MEVDGVDDFHFEGIPEV----AGLRIEDSNNVVLQGGASNVYEVPTPVFLPPTGGDQAASVVITGASSGIVFQDCSIYAGGDTAPVLMESTEPLTLDNILGYEAAESGDCII 946
BLAST of mRNA_H-elongata_contig6886.14525.1 vs. uniprot
Match: A0A6H5JDS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDS6_9PHAE) HSP 1 Score: 145 bits (367), Expect = 1.000e-31 Identity = 156/621 (25.12%), Postives = 278/621 (44.77%), Query Frame = 3
Query: 978 YYAKDNDVSTSWTCDD----STNSNGDCKLIFNLFWYRHIKQVKIALSNGADAAMDMKIGT-----AWYSDDPYEMFVESSGTTTDFETYEFDVFTNRIVVA---GYVTGDESIAIAEVEFIE----EVFVGEMPVVAFATPYESGDGSLDTVTMNGFEWWSESDDALDEEVVFKLVKWSSLTRVDLQFPTGETYLFELHLYTEEDGANDPFTTFTGLESEDISEWQSFAV----ELDGDQTVTEVRLIMKGTGSGASGFYLLDARFIATTANNPTDTYRVGSPRIEEWPGTLYPEFVGEGRSDQEAIMGAICAVKKASFDGVDCVGEDDSATGTVTLPMGDYYVNGNIFMKSGVFLNGDSSIDDSPYTTEIYLEDGAAGN-TDIDAIIVVDGVTDAVIGQIWIEGLYDPDTSDETSAVAGLGSTAISITNSQNIVYNDAWVGNMDGDCLVIRNSQMIS---------IDAGPYDEEYKPSRI---ASNRGIGLLVDGSENVYIRRHSIYDNGEAGINIIGSTNFTFDATIGESEGDGYVGSLDGQQPIEVIVES-SNRVTFQDMKVTSANEPVMTVSADSSDVFFNNCGFSSVDSGTCVIQTEDPSVVTAEDDELVLVDT 2738
+Y KD ++ + WTC S ++ DC L F+L ++R+I+Q++IA G + I W + P + SS +D++T++ V TN I + G +T + I I E+ F+E + G +PV + S D + E D ++ + V S++T + ++FP +++F + E DG + FT+ G ++ W++F + E+D V V ++D + + P V + IE W + P+ +GEG S+Q+ +M AIC K ++FDG+DCVGE D + T+ L GDYY++G IF+KSGVF++GD D+ P + L DG + T DA++VVDG T A + + DP T D +G+T +++ NSQ+I +++ + + +S+ +S ++ G Y E + + A G+L+D ++ G++ + F + G Q V+V S+ + FQ+ V + EP + V + N ++ + G C+++ + + ++D +V V T
Sbjct: 392 FYIKDENMDSRWTCGPLVAGSDRNSWDCDLEFSLNYFRYIRQIQIAFYTGDGEHNEFSIEAYTAAGEWVTVVPSAI---SSEDGSDYQTFDVAVHTNMIRLLPKFGQIT--DFIGIKELVFLEKRKKDFIEGTIPVFSTRIRSTSNDDEEEDGADVDIPTRFEFDLQIEGNYIDMNVPPSTVTALRMRFPADRSFVFMV----EYDGIVEEFTSAGGPKT-----WETFTLSTPAEVDFGLEVVAVTGPTFDHIPDYPALRVVDLQVVGELRKEP-GYIDVVTTTIETWG--VVPDVIGEGVSEQKTVMKAICEAKGSTFDGIDCVGELDDSEVTIKLQFGDYYIDGPIFLKSGVFIDGDWK-DEYPTFCWLVLYDGDSNTVTGEDAMVVVDGATGAELYGLAFVRKEDP-TGDIVPGT--VGNTNLAVRNSQDIRFSEMGLFSGRNGGATFTDSRNMSAFIFYNGDGLETGNYMELTRVDDVHFRALPNMSGVLIDTCNDIVFE----------GVDEFAIPSAYFSPPV-----------AGGDQTANVVVTGDSSGIVFQNFIVAAGAEPRILVESTEPLTLDNVIRYTDAEIGDCIVEVPEGT----DEDFVVQVRT 966 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6886.14525.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig6886.14525.1 >prot_H-elongata_contig6886.14525.1 ID=prot_H-elongata_contig6886.14525.1|Name=mRNA_H-elongata_contig6886.14525.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=697bp MYKGDERTRTIDAYVDGVIVTSWTSSGTTLDFEAVALGVTGTSIELRGVLback to top mRNA from alignment at H-elongata_contig6886:1502..9423+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig6886.14525.1 ID=mRNA_H-elongata_contig6886.14525.1|Name=mRNA_H-elongata_contig6886.14525.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=7922bp|location=Sequence derived from alignment at H-elongata_contig6886:1502..9423+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig6886:1502..9423+ >mRNA_H-elongata_contig6886.14525.1 ID=mRNA_H-elongata_contig6886.14525.1|Name=mRNA_H-elongata_contig6886.14525.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=4182bp|location=Sequence derived from alignment at H-elongata_contig6886:1502..9423+ (Himanthalia elongata Himel1 dioecious)back to top |