mRNA_H-elongata_contig6881.14519.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig6881.14519.1 vs. uniprot
Match: D7FQA0_ECTSI (PPM-type phosphatase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQA0_ECTSI) HSP 1 Score: 445 bits (1144), Expect = 9.790e-150 Identity = 221/304 (72.70%), Postives = 248/304 (81.58%), Query Frame = 1
Query: 31 NGHMGASMGSAKHEDFLAPGYPSVSSGTFSKESPFLCKEHPTNEDRAIRFDDMVSTLSLAPQGTRGPLACLYGVFDGHGGEGASQFVANHLHHLIGRSPYYESIDYPADEALASAVEDGIASVEQAYTDWARRSGDNSGCCACVVAIRGSVLCAANVGDCQAILITEKGTHVPLSRPHRASSIDEKARITKSGGRVIHGRAMGVLEPSRVIGDIDIKRNCPNVVISQPYVMVRSIHYKRGQGSSFLVVASDGVWDSLAPTKVSELVKASFVKQKTPHQASQELVMAARWAGSGDDVTAVVVRLG 942
N H +M S + ED L PGYP V S TFS SPFLC EHPTNEDRA+ FDDMVS L LAP GTRGPLACL+GVFDGHGG+GAS+FVANHLHHLIGRS +YESIDYPADEALASAVE+G+ASVEQAYTDW++RSGD SGCCACVVAIRGSVLCAANVGDCQAILIT+KG V LSRPHRA +DEKARI +GG+V+ GR MGVLEPSRVIGD DIKR P VI++PYV+VRS+ Y RGQ S LVVASDGVWD + VS+LV + KQK P Q S+ELV AAR AGSGDD+T V+ +LG
Sbjct: 35 NTHERGNMASMEQEDPLPPGYPCVRSSTFSSASPFLCPEHPTNEDRALVFDDMVSVLKLAPTGTRGPLACLFGVFDGHGGDGASKFVANHLHHLIGRSAFYESIDYPADEALASAVEEGVASVEQAYTDWSKRSGDTSGCCACVVAIRGSVLCAANVGDCQAILITDKGAIVSLSRPHRAVDLDEKARIRSNGGKVVQGRVMGVLEPSRVIGDYDIKRTWPGCVIAEPYVLVRSLPYTRGQEPSILVVASDGVWDFMTQASVSKLVTEAIRKQKDPRQVSKELVAAAREAGSGDDITVVIAKLG 338
BLAST of mRNA_H-elongata_contig6881.14519.1 vs. uniprot
Match: A0A836CMW2_9STRA (Phosphatase 2C-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMW2_9STRA) HSP 1 Score: 138 bits (348), Expect = 2.220e-33 Identity = 92/246 (37.40%), Postives = 135/246 (54.88%), Query Frame = 1
Query: 244 YGVFDGHGGEGASQFVANHLHHLIGRSPYYESIDYPADEALASAVEDGIASVEQAYTDWARRSGDNSGCCACVVAIRGSVLCAANVGDCQAIL-ITEKGTHVPLSRPHRASSIDEKARITKSGGRVIHGRAMGVLEPSRVIGDIDIKRNCPNVVISQPYV--MVRSIHYKRGQGSS----------FLVVASDGVWDSLAPTKVSELVKASF-VKQKTPHQAS--QELVMAARWAGSGDDVTAVVV 933
+ VFDGHGG SQ++A++L + + + + L A+ + E Y D A + D+SG C V +C ANVGDC A+L + +HV LS HR+ +E RI +GG VI+ RA GVLEPSR IGD+D+KR+C V + PY+ +V + +G++ FL+ ASDG+WD +A V +L K S V +K P +++ ++LV AA G+ DD TA+VV
Sbjct: 9 FAVFDGHGGSRCSQWLADNLEEDLRCADSWRQEGLTLPKRLKGALVQALKRAEYKYLDLAFKESDHSGACVVVGLYCEGHVCVANVGDCLAVLYLPGADSHVDLSVAHRSRQPEEARRIEAAGGLVINNRAFGVLEPSRSIGDLDLKRHCRGAVTADPYIREVVIPPPQQPAEGAAKKKPALQEAPFLLFASDGLWDVVAAPVVVDLTKKSLKVWRKKPAKSNPARQLVRAAIRHGTMDDTTAIVV 254
BLAST of mRNA_H-elongata_contig6881.14519.1 vs. uniprot
Match: A0A7S3XLZ6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XLZ6_HETAK) HSP 1 Score: 132 bits (332), Expect = 4.730e-31 Identity = 91/255 (35.69%), Postives = 131/255 (51.37%), Query Frame = 1
Query: 241 LYGVFDGHGGEGASQFVANHL-----HHLIGRSPYYESIDYPADEALASAVEDGIASVEQAYTDWARRSGDNSGCCACVVAIRGSVLCAANVGDCQAILITEKGTHVPLSRPHRASSIDEKARITKSGGRVIHGRAMGVLEPSRVIGDIDIKRNCPNVVISQPYVMVRSIHYKRGQGSS----FLVVASDGVWDSLAPTKVSELVKASFVKQK---------------TPHQASQELVMAARWAGSGDDVTAVVV 933
++ V DGHGG G + F+ ++L HH + E+ L + V + I SV+ +T +A D SG C V + +C ANVGDC +L G S+ HR + E RI K+G + GR G+L PSR +GD+D++ P V+++PYV V + GQGSS FL++ASDG+WDS+ T ++ VK + K+K TP A + LV AA+ GS DD+ AVVV
Sbjct: 20 IFSVIDGHGGPGCADFLQSNLTDRIKHHFATKCSQGET-SLGLGAVLTACVSEAICSVDADFTKYAESVNDYSGACFVVALCYSNTICFANVGDCLGVLYNSTGKIKLPSQVHRCTIQKEIQRIAKAGAPLRDGRLGGLLVPSRSVGDLDVRLAYPGAVVAEPYVAVLELEV--GQGSSHRRPFLLLASDGIWDSMQTTAAAKHVKRTL-KEKGWDLGAFHSDEGIELTPDPA-KSLVEAAKKLGSVDDIAAVVV 269
BLAST of mRNA_H-elongata_contig6881.14519.1 vs. uniprot
Match: F2UJ13_SALR5 (PPM-type phosphatase domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UJ13_SALR5) HSP 1 Score: 128 bits (322), Expect = 1.640e-28 Identity = 92/290 (31.72%), Postives = 139/290 (47.93%), Query Frame = 1
Query: 148 HPTNEDRAIRFDDMVSTLSLAPQ----GTRGPLACLYGVFDGHGGEGASQFVANHLHH----LIGRSPYYESIDYPADEALASAVEDGIASVEQAYTDWARRSGDNSGCCACVVAIRGSVLCAANVGDCQAILITEKGTHVP-------LSRPHRASSIDEKARITKSGGRVI-HGRAMGVLEPSRVIGDIDIKRNCPNVVIS----------QPYVMVRSIHYKRGQGSSFLVVASDGVWDSLAPTKVSELVKASFVKQKTPHQASQELVMAARWAGSGDDVTAVVVRL 939
H NED+A +D+ + GT ++ VFDGHGG AS++ HLH L+ RS Y D+ + A+ + E + +WA++ + +G CA V I+G + N GD +A++I + P L+ H + E+ RI K+GGR+ G GVL P+R GDID+K + VVI PYV+ S+LV+ASDG+WD ++ V L ++ ++P + + EL AR GS DD+T +VVRL
Sbjct: 120 HEANEDKATIIEDLFKEFPPKHEHEYNGTPQQKLSVFAVFDGHGGYEASEWAQTHLHQHLSDLLWRSNY--------DDKITDALHHSFKATEDGFCEWAKKKKNMAGSCATCVVIKGRKVFCGNAGDSKAMIIRQVRKQTPKAADRSDLNHRHGSHLKSERVRIKKAGGRIAPDGSVYGVLFPTRGFGDIDVKADGRPVVICTPDGAGFDKWSPYVLDTDT-------VSYLVIASDGLWDFVSDKDVEALT----MQYQSPKEIAVELTKEARMGGSEDDITIIVVRL 390
BLAST of mRNA_H-elongata_contig6881.14519.1 vs. uniprot
Match: A0A1V9YQT7_9STRA (Protein phosphatase 2C n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YQT7_9STRA) HSP 1 Score: 125 bits (313), Expect = 1.070e-27 Identity = 87/238 (36.55%), Postives = 129/238 (54.20%), Query Frame = 1
Query: 235 ACLYGVFDGHGGEGASQFVANHLHHLIGRSPYYESIDYPADEALASAVEDGIASVEQAYTDWARRSGDNSGCCACVVAIRGSVLCAANVGDCQAILITEKGTHVPLSRPHRASSIDEKARITKSGGRVIHG---RAMGVLEPSRVIGDIDIKRNCPNVVISQPYVMVRSIHYKRGQGSSFLVVASDGVWDSLAPTKVSELVKASFVKQKTPHQASQELVMAARWAGSGDDVTAVVVRL 939
A YGVFDGHGG+GAS++ A L + + P Y YP + A+ G ++ YT A R + G A V +G+ L ANVGD +AIL+ + G V LS H+ + DE+ R+T GG VI R G+L SR IGD +K VI++P + ++R +FLV+ASDGVWD L+ +V+ LV ++ + H A++ ++ A GS D++ A+V+ L
Sbjct: 89 ASFYGVFDGHGGDGASEYCAEMLCANVTQDPMYTQ--YPKE-----ALTKGFLRTDEDYTQLANRRNRDDGTTAVTVLAQGNTLYVANVGDSRAILVKKDGEAVALSTDHKPNRPDERERVTNMGGHVIFWGVWRVEGILAVSRAIGDRMLKP----YVIAEPEIT----QHERTADDAFLVLASDGVWDVLSNAEVARLV----LQADSIHLAAKTVMEYAYQRGSLDNICAMVIDL 307
BLAST of mRNA_H-elongata_contig6881.14519.1 vs. uniprot
Match: A0A1W0A3K5_9STRA (Phosphatase 2C n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A3K5_9STRA) HSP 1 Score: 124 bits (311), Expect = 1.700e-27 Identity = 84/240 (35.00%), Postives = 128/240 (53.33%), Query Frame = 1
Query: 229 PLACLYGVFDGHGGEGASQFVANHLHHLIGRSPYYESIDYPADEALASAVEDGIASVEQAYTDWARRSGDNSGCCACVVAIRGSVLCAANVGDCQAILITEKGTHVPLSRPHRASSIDEKARITKSGGRVIHG---RAMGVLEPSRVIGDIDIKRNCPNVVISQPYVMVRSIHYKRGQGSSFLVVASDGVWDSLAPTKVSELVKASFVKQKTPHQASQELVMAARWAGSGDDVTAVVVRL 939
P A YGVFDGHGG+GAS++ A L I + P Y+ YP + A+ G + Y +A R + G A V +G+ + ANVGD +AIL+ + G V LS H+ + DE+ R+T GG VI R G+L SR IGD +K VI++P + ++R +F+++ASDGVWD L +V+ L ++ ++ AS+ ++ A GS D++ A+V+ L
Sbjct: 78 PNASFYGVFDGHGGDGASEYCAEMLCDNIMQDPMYQQ--YPKE-----ALTKGFLRTDAEYVQYANRRNRDDGTTAVTVLAKGNTIYVANVGDSRAILVKKNGEVVALSTDHKPNRADERERVTNMGGHVIFWGVWRVEGILAVSRAIGDRMLKP----YVIAEPEIT----QHERSDDDAFIILASDGVWDVLPNDEVARLA----LQAESVQLASKTIMEYAYQRGSLDNICAMVIDL 298
BLAST of mRNA_H-elongata_contig6881.14519.1 vs. uniprot
Match: A0A7S0QGW5_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QGW5_9CRYP) HSP 1 Score: 125 bits (314), Expect = 3.460e-26 Identity = 101/278 (36.33%), Postives = 145/278 (52.16%), Query Frame = 1
Query: 157 NEDRAI--RFDDMVST-LSLAPQG-TRGPLACLYGVFDGHGGEGASQFVANHL-HHLIGRSPYYESIDYPADEALASAVEDGIASVEQAYTDWARRSGDNSGCCA-CVVAIRGS---VLCAANVGDCQAILITE----KGTHVPLSRPHRASSIDEKARITKSGGRVIHGRAMGVLEPSRVIGDIDIKRNCPNVVISQPYVMVRSIHYKRGQGSSFLVVASDGVWDSLAPTKVSELVKASFVKQKTPHQASQELVMA------ARWAGSGDDVTAVVV 933
NEDRA+ F DMVS L A G +R ++ VFDGHGG+GAS+ NHL +++ + D+AL A G A E+ + A +GD SG CA CVV L AAN+GDC+A++ K V ++ RA + DEK RI +GG+V+ RA+G L PSR +GD K CP VI+ P V RS ++ +L++ASDG+WD L ++ E++ K++ P A++ L A A+ DD+T + V
Sbjct: 675 NEDRALMGEFADMVSAPLKAALLGKSRSKQMPVFAVFDGHGGDGASEHAKNHLVPNVVEALEAQHAAGAEGDDALREAYAAGFARTEEQLRERAASTGDRSGTCAVCVVVWEQDGVFTLHAANLGDCRAMVARRDDSGKLVGVRVTDDQRAVTPDEKRRIEAAGGKVVDNRALGDLIPSRSLGDFKTKDKCPGAVIATPDV--RS--FELTGRDRWLLLASDGLWDDLKVDRIMEILS----KERDPKAANKALSSAVIRKCGAKQHKPKDDLTIISV 944
BLAST of mRNA_H-elongata_contig6881.14519.1 vs. uniprot
Match: A0A024TH63_9STRA (PPM-type phosphatase domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TH63_9STRA) HSP 1 Score: 120 bits (300), Expect = 6.820e-26 Identity = 94/271 (34.69%), Postives = 136/271 (50.18%), Query Frame = 1
Query: 145 EHPTNEDRAIRFDDMVSTLSLAPQGTRGPLACLYGVFDGHGGEGASQFVANHLHHLIGRSPYYESIDYPADEALASAVEDGIASVEQAYTDWARRSGDNSGCCACVVAIRGSVLCAANVGDCQAILITEKGTHVPLSRPHRASSIDEKARITKSGGRVIHG---RAMGVLEPSRVIGDIDIKRNCPNVVISQPYVMVRSIHYKRGQGSSFLVVASDGVWDSLAPTKVSELVKASFVKQKTPHQASQELVMAARWAGSGDDVTAVVVRLG*G 948
+ P EDR +V TL+ P T YGVFDGHGG+GAS++ L I P + D LA + G ++ Y A R + G A V +RG + AANVGD +A+LI + G VPLS H+ + DE+ R+ GG VI R G+L SR IGD +K VI++P + + R +V+ASDGVWD L+ + V+ LV ++ +TP A++ ++ + GS D++ A+VV L G
Sbjct: 66 KRPYMEDRHT----VVGTLNGDPWST------FYGVFDGHGGDGASEYCVASLCSNITADPAFAH-----DPKLA--LSRGFVKTDKDYIQLADRYNKDDGTTAIGVLVRGDAIYAANVGDSRAVLIKKNGDAVPLSSDHKPNRPDERERVNSMGGHVIFWGVWRVEGILAVSRAIGDRMLKP----YVIAEPEI----VETTRSDEDQCIVLASDGVWDVLSNSDVARLV----LQSETPQLAAKTIMEYSFQRGSQDNICALVVDLSRG 307
BLAST of mRNA_H-elongata_contig6881.14519.1 vs. uniprot
Match: T0RBY4_SAPDV (PPM-type phosphatase domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0RBY4_SAPDV) HSP 1 Score: 119 bits (297), Expect = 1.590e-25 Identity = 82/238 (34.45%), Postives = 129/238 (54.20%), Query Frame = 1
Query: 235 ACLYGVFDGHGGEGASQFVANHLHHLIGRSPYYESIDYPADEALASAVEDGIASVEQAYTDWARRSGDNSGCCACVVAIRGSVLCAANVGDCQAILITEKGTHVPLSRPHRASSIDEKARITKSGGRVIHG---RAMGVLEPSRVIGDIDIKRNCPNVVISQPYVMVRSIHYKRGQGSSFLVVASDGVWDSLAPTKVSELVKASFVKQKTPHQASQELVMAARWAGSGDDVTAVVVRL 939
A YGVFDGHGG+GAS++ A L + + + P Y YP + A+ G ++ YT A R + G A V + + ANVGD +A+LI + G + LS H+ + DE+ R+T GG VI R G+L SR IGD +K VI++P + ++R ++LV+ASDGVWD L+ +V+ +V ++ + H A++ ++ +A GS D++ A+V+ L
Sbjct: 95 ASFYGVFDGHGGDGASEYCAEVLCNNVIQDPMYAK--YPKE-----ALTKGFLRTDEDYTQVANRRNRDDGTTAVTVLAQRDTIYVANVGDSRAVLIKKDGDAIALSNDHKPNRPDERERVTNMGGHVIFWGVWRVEGILAVSRAIGDRMLKP----YVIAEPEIT----EHERCADDAYLVLASDGVWDVLSNAEVARMV----LQADSIHLAAKTIMESAYQRGSLDNICAMVLDL 313
BLAST of mRNA_H-elongata_contig6881.14519.1 vs. uniprot
Match: A0A0H5R981_9EUKA (PPM-type phosphatase domain-containing protein (Fragment) n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5R981_9EUKA) HSP 1 Score: 116 bits (291), Expect = 9.840e-25 Identity = 82/248 (33.06%), Postives = 119/248 (47.98%), Query Frame = 1
Query: 250 VFDGHGGEGASQFVANHLHHLIGRSPYYESIDYPADEALASAVEDGIASVEQA-----------YTDWARRSGDNSGCCACVVAIRGSVLCAANVGDCQAILITEKGTHVPLSRPHRASSIDEKARITKSGGRVIHGRAMGVLEPSRVIGDIDIKRNCPNVVISQPYV--MVRSIHYKRGQGSSFLVVASDGVWDSLAPTKVSELVKASFV----KQKTPHQASQELVMAARWAGSGDDVTAVVVRLG 942
V DGH G AS F +HL + R A + L + DGI +++ A + ARRS SG C IRG L AN GDC + + H + + H A+ IDE R+ +GG + R MG+L PSR GD D++ +CP +I P + +V + Q F+V+ SDGV+D+L+ + +VK S + K A+++LV A S DDVTA+V+ G
Sbjct: 124 VSDGHDGAEASSFAHDHLTWNVHR----------ALQVLEDTLPDGICTIDHALHHAFFTTDNQFCQKARRSSCTSGACVLAATIRGRHLALANAGDCGVVYHDNEAQHGLVCKRHSAADIDEANRVRLAGGFIRGARVMGILSPSRGFGDTDVRDSCPGSIIPDPDIRSIVIPLIKDTEQSPVFIVMGSDGVFDTLSLDAIVSIVKRSLLLHRNKPNRAEIAARKLVRQCA-ASSDDDVTAIVICFG 360 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6881.14519.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig6881.14519.1 >prot_H-elongata_contig6881.14519.1 ID=prot_H-elongata_contig6881.14519.1|Name=mRNA_H-elongata_contig6881.14519.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=302bp MGASMGSAKHEDFLAPGYPSVSSGTFSKESPFLCKEHPTNEDRAIRFDDMback to top mRNA from alignment at H-elongata_contig6881:2629..9420+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig6881.14519.1 ID=mRNA_H-elongata_contig6881.14519.1|Name=mRNA_H-elongata_contig6881.14519.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6792bp|location=Sequence derived from alignment at H-elongata_contig6881:2629..9420+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig6881:2629..9420+ >mRNA_H-elongata_contig6881.14519.1 ID=mRNA_H-elongata_contig6881.14519.1|Name=mRNA_H-elongata_contig6881.14519.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1812bp|location=Sequence derived from alignment at H-elongata_contig6881:2629..9420+ (Himanthalia elongata Himel1 dioecious)back to top |