mRNA_H-elongata_contig68707.14506.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig68707.14506.1 vs. uniprot
Match: D7FZG6_ECTSI (Acetyl-CoA carboxylase, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZG6_ECTSI) HSP 1 Score: 311 bits (798), Expect = 5.630e-97 Identity = 147/168 (87.50%), Postives = 158/168 (94.05%), Query Frame = 1
Query: 46 KVWFPDSAYKTAQAINDFNRGENLPLMIFANWRGFSGGTRDMYGEILKFGAQIVDALVNYKHPVFVYIPPNGELRGGAWVVIDPTINEEVMEMYADVESRGGILEPPGICEVKFRAPDQMMKMHELDPILLGLDADLKVVGSEEDEQALKQQIKTREEVLFPMYLQVS 549
+VWFPDSAYKTAQAINDFNRGENLPLMIFANWRGFSGGTRDMYGEILKFGAQIVDALV YKHPVFVYIPPNGELRGGAWVVIDPTIN++VMEMYAD ESRGGILEPPGICEVKFRA DQ+ KMHELDP+L GLD D+ + GSEEDEQALK+QIK+RE+ L PMYLQV+
Sbjct: 757 QVWFPDSAYKTAQAINDFNRGENLPLMIFANWRGFSGGTRDMYGEILKFGAQIVDALVAYKHPVFVYIPPNGELRGGAWVVIDPTINDQVMEMYADAESRGGILEPPGICEVKFRAADQITKMHELDPVLQGLDGDVPMAGSEEDEQALKKQIKSREDALLPMYLQVA 924
BLAST of mRNA_H-elongata_contig68707.14506.1 vs. uniprot
Match: A0A6H5L0S0_9PHAE (Acetyl-CoA carboxylase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0S0_9PHAE) HSP 1 Score: 305 bits (781), Expect = 9.870e-93 Identity = 148/173 (85.55%), Postives = 157/173 (90.75%), Query Frame = 1
Query: 46 KVWFPDSAYKTAQAINDFNRGENLPLMIFANWRGFSGGTRDMYGEILKFGAQIVDALVNYKHPVFVYIPPNGELRGGAWVVIDPTINEE-----VMEMYADVESRGGILEPPGICEVKFRAPDQMMKMHELDPILLGLDADLKVVGSEEDEQALKQQIKTREEVLFPMYLQVS 549
+VWFPDSAYKTAQAINDFNRGENLPLMIFANWRGFSGGTRDMYGEILKFGAQIVDALV YKHPVFVYIPPNGELRGGAWVVIDPTIN++ VMEMYAD ESRGGILEPPGICEVKFRA DQ+ KMHELDPIL GLD D+ + GSEEDEQALK+QIK+RE L PMYLQV+
Sbjct: 1810 QVWFPDSAYKTAQAINDFNRGENLPLMIFANWRGFSGGTRDMYGEILKFGAQIVDALVAYKHPVFVYIPPNGELRGGAWVVIDPTINDQARAHRVMEMYADAESRGGILEPPGICEVKFRAADQITKMHELDPILQGLDGDVPMAGSEEDEQALKKQIKSRENALLPMYLQVA 1982
BLAST of mRNA_H-elongata_contig68707.14506.1 vs. uniprot
Match: A0A836CCC4_9STRA (Acetyl-CoA carboxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCC4_9STRA) HSP 1 Score: 298 bits (764), Expect = 1.910e-90 Identity = 141/168 (83.93%), Postives = 154/168 (91.67%), Query Frame = 1
Query: 46 KVWFPDSAYKTAQAINDFNRGENLPLMIFANWRGFSGGTRDMYGEILKFGAQIVDALVNYKHPVFVYIPPNGELRGGAWVVIDPTINEEVMEMYADVESRGGILEPPGICEVKFRAPDQMMKMHELDPILLGLDADLKVVGSEEDEQALKQQIKTREEVLFPMYLQVS 549
+VWFPDSAYKTAQAINDFN GENLPL+IFANWRGFSGGTRDM+GEILKFGAQIVDALV YKHPVFVYIPPNGELRGGAWVV+DPTINEEVMEMYAD +SRGGILEPPGICEVKFRAPDQ++KMH+LD IL LDADL+V + ED ALK+QIK RE+ L PMYLQV+
Sbjct: 1758 QVWFPDSAYKTAQAINDFNHGENLPLIIFANWRGFSGGTRDMFGEILKFGAQIVDALVAYKHPVFVYIPPNGELRGGAWVVVDPTINEEVMEMYADTDSRGGILEPPGICEVKFRAPDQVLKMHQLDVILRSLDADLEVAATPEDAAALKKQIKEREDALLPMYLQVA 1925
BLAST of mRNA_H-elongata_contig68707.14506.1 vs. uniprot
Match: A0A7S0EW76_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0EW76_9CRYP) HSP 1 Score: 271 bits (692), Expect = 1.810e-88 Identity = 129/168 (76.79%), Postives = 144/168 (85.71%), Query Frame = 1
Query: 46 KVWFPDSAYKTAQAINDFNRGENLPLMIFANWRGFSGGTRDMYGEILKFGAQIVDALVNYKHPVFVYIPPNGELRGGAWVVIDPTINEEVMEMYADVESRGGILEPPGICEVKFRAPDQMMKMHELDPILLGLDADLKVVGSEEDEQALKQQIKTREEVLFPMYLQVS 549
+VWFPDSAYKTAQAI DFNRGENLPL+IFANWRGFSGGTRDMY EILKFG+ IVD L YKHPVFVY+PPNGELRGGAWVV+DPTINEE+MEMYADV+SRGGILEPPGICEVK+RAPDQ+ MH LDP L LDA L SEE + +K+QIK RE L P+YLQ++
Sbjct: 27 QVWFPDSAYKTAQAIEDFNRGENLPLIIFANWRGFSGGTRDMYNEILKFGSMIVDGLRTYKHPVFVYLPPNGELRGGAWVVVDPTINEEMMEMYADVQSRGGILEPPGICEVKYRAPDQIKTMHRLDPELQELDAKLDKATSEEAAK-IKEQIKKRENTLMPLYLQIA 193
BLAST of mRNA_H-elongata_contig68707.14506.1 vs. uniprot
Match: A0A4D9D5Z2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D5Z2_9STRA) HSP 1 Score: 271 bits (693), Expect = 3.140e-86 Identity = 126/168 (75.00%), Postives = 145/168 (86.31%), Query Frame = 1
Query: 46 KVWFPDSAYKTAQAINDFNRGENLPLMIFANWRGFSGGTRDMYGEILKFGAQIVDALVNYKHPVFVYIPPNGELRGGAWVVIDPTINEEVMEMYADVESRGGILEPPGICEVKFRAPDQMMKMHELDPILLGLDADLKVVGSEEDEQALKQQIKTREEVLFPMYLQVS 549
+VW+PDSA+KTAQAI DFNRGENLPL+IFANWRGFSGGTRDM+GEILKFGA+IVDAL Y+HPVFVYIPPNGELRGGAWVVIDPTINEE+MEMYAD +SRGGILEPPGICEVKFR DQ+ MH LDP++ LD +L+ +E+D L QQ+K REE L P+Y QV+
Sbjct: 214 QVWYPDSAFKTAQAIEDFNRGENLPLIIFANWRGFSGGTRDMFGEILKFGAKIVDALRTYRHPVFVYIPPNGELRGGAWVVIDPTINEEMMEMYADKDSRGGILEPPGICEVKFRNADQVSAMHRLDPVIQALDGELQNAKTEQDAAKLTQQLKEREEALLPLYTQVA 381
BLAST of mRNA_H-elongata_contig68707.14506.1 vs. uniprot
Match: A0A0B4L7Y6_9STRA (Acetyl-CoA carboxylase n=1 Tax=Nannochloropsis oculata TaxID=43925 RepID=A0A0B4L7Y6_9STRA) HSP 1 Score: 278 bits (711), Expect = 2.570e-83 Identity = 130/168 (77.38%), Postives = 147/168 (87.50%), Query Frame = 1
Query: 46 KVWFPDSAYKTAQAINDFNRGENLPLMIFANWRGFSGGTRDMYGEILKFGAQIVDALVNYKHPVFVYIPPNGELRGGAWVVIDPTINEEVMEMYADVESRGGILEPPGICEVKFRAPDQMMKMHELDPILLGLDADLKVVGSEEDEQALKQQIKTREEVLFPMYLQVS 549
+VW+PDSA+KTAQAI DFNRGENLPLMIFANWRGFSGGTRDMYGEILKFGA+IVDAL Y+HPVFVYIPPNGELRGGAWVVIDPTINEE+MEMYAD +SRGGILEPPGICEVKFRA DQ+ MH LDP++ LD +L+ +E D LKQQ+K REE L P+Y+QV+
Sbjct: 1844 QVWYPDSAFKTAQAIEDFNRGENLPLMIFANWRGFSGGTRDMYGEILKFGAKIVDALRTYRHPVFVYIPPNGELRGGAWVVIDPTINEEMMEMYADKDSRGGILEPPGICEVKFRAADQISAMHRLDPVIQALDGELQNAKTEADAIKLKQQLKEREEALLPLYMQVA 2011
BLAST of mRNA_H-elongata_contig68707.14506.1 vs. uniprot
Match: A0A7S2F2I2_9STRA (Acetyl-CoA carboxylase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F2I2_9STRA) HSP 1 Score: 276 bits (707), Expect = 8.850e-83 Identity = 131/168 (77.98%), Postives = 146/168 (86.90%), Query Frame = 1
Query: 46 KVWFPDSAYKTAQAINDFNRGENLPLMIFANWRGFSGGTRDMYGEILKFGAQIVDALVNYKHPVFVYIPPNGELRGGAWVVIDPTINEEVMEMYADVESRGGILEPPGICEVKFRAPDQMMKMHELDPILLGLDADLKVVGSEEDEQALKQQIKTREEVLFPMYLQVS 549
+VW+PDSAYKTAQAINDF RGENLPL+IFANWRGFSGGTRDM GEILKFG+ IVDALV Y+HPVFVYIPPN ELRGGAWVVIDPTINEEVMEMYAD ESRGGILEPPGICEVKFR DQ+ KMH+LDPIL LD + +G+E+D ++K QIK RE L P+YLQV+
Sbjct: 1801 QVWYPDSAYKTAQAINDFGRGENLPLIIFANWRGFSGGTRDMAGEILKFGSMIVDALVKYEHPVFVYIPPNAELRGGAWVVIDPTINEEVMEMYADEESRGGILEPPGICEVKFRERDQLNKMHQLDPILASLDEESDAIGNEDDLGSIKAQIKERETQLLPLYLQVA 1968
BLAST of mRNA_H-elongata_contig68707.14506.1 vs. uniprot
Match: L1JJM5_GUITC (Acetyl-CoA carboxylase n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JJM5_GUITC) HSP 1 Score: 271 bits (693), Expect = 6.750e-81 Identity = 129/168 (76.79%), Postives = 144/168 (85.71%), Query Frame = 1
Query: 46 KVWFPDSAYKTAQAINDFNRGENLPLMIFANWRGFSGGTRDMYGEILKFGAQIVDALVNYKHPVFVYIPPNGELRGGAWVVIDPTINEEVMEMYADVESRGGILEPPGICEVKFRAPDQMMKMHELDPILLGLDADLKVVGSEEDEQALKQQIKTREEVLFPMYLQVS 549
+VWFPDSAYKTAQAI DFNRGENLPL+IFANWRGFSGGTRDMY EILKFG+ IVD L YKHPVFVY+PPNGELRGGAWVV+DPTINEE+MEMYADV+SRGGILEPPGICEVK+RAPDQ+ MH LDP L LDA L +EE Q +K+QIK RE L P+YLQ++
Sbjct: 1762 QVWFPDSAYKTAQAIEDFNRGENLPLIIFANWRGFSGGTRDMYNEILKFGSMIVDGLRTYKHPVFVYLPPNGELRGGAWVVVDPTINEEMMEMYADVQSRGGILEPPGICEVKYRAPDQIKTMHRLDPELQELDAKLDKATAEEAAQ-IKEQIKKRENTLMPLYLQIA 1928
BLAST of mRNA_H-elongata_contig68707.14506.1 vs. uniprot
Match: I2CQP5_NANGC (Acetyl-CoA carboxylase n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQP5_NANGC) HSP 1 Score: 270 bits (690), Expect = 1.710e-80 Identity = 125/168 (74.40%), Postives = 145/168 (86.31%), Query Frame = 1
Query: 46 KVWFPDSAYKTAQAINDFNRGENLPLMIFANWRGFSGGTRDMYGEILKFGAQIVDALVNYKHPVFVYIPPNGELRGGAWVVIDPTINEEVMEMYADVESRGGILEPPGICEVKFRAPDQMMKMHELDPILLGLDADLKVVGSEEDEQALKQQIKTREEVLFPMYLQVS 549
+VW+PDSA+KTAQA+ DFNRGENLPL+IFANWRGFSGGTRDM+GEILKFGA+IVDAL Y+HPVFVYIPPNGELRGGAWVVIDPTINEE+MEMYAD +SRGGILEPPGICEVKFR DQ+ MH LDP++ LD +L+ +E+D L QQ+K REE L P+Y QV+
Sbjct: 1846 QVWYPDSAFKTAQAMEDFNRGENLPLIIFANWRGFSGGTRDMFGEILKFGAKIVDALRTYRHPVFVYIPPNGELRGGAWVVIDPTINEEMMEMYADKDSRGGILEPPGICEVKFRNADQVSAMHRLDPVIQALDGELQNAKTEQDAAKLTQQLKEREEALLPLYTQVA 2013
BLAST of mRNA_H-elongata_contig68707.14506.1 vs. uniprot
Match: A0A7S0M2Y7_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0M2Y7_9CRYP) HSP 1 Score: 265 bits (677), Expect = 3.840e-80 Identity = 124/168 (73.81%), Postives = 142/168 (84.52%), Query Frame = 1
Query: 46 KVWFPDSAYKTAQAINDFNRGENLPLMIFANWRGFSGGTRDMYGEILKFGAQIVDALVNYKHPVFVYIPPNGELRGGAWVVIDPTINEEVMEMYADVESRGGILEPPGICEVKFRAPDQMMKMHELDPILLGLDADLKVVGSEEDEQALKQQIKTREEVLFPMYLQVS 549
+VWFPDSAYKTAQAI DFNRGENLPL+IFANWRGFSGGTRDM+ EILKFG+ IVDAL Y+HPVF+Y+PPNGELRGGAWVV+DPTINE++MEMYAD ESRGGILEPPGICEVKFR DQ+ MH LDP+LL LDA L + +LK+QI REE L P+YLQ++
Sbjct: 651 QVWFPDSAYKTAQAIEDFNRGENLPLIIFANWRGFSGGTRDMFNEILKFGSMIVDALRTYQHPVFIYLPPNGELRGGAWVVVDPTINEQMMEMYADRESRGGILEPPGICEVKFRKQDQVKAMHRLDPVLLDLDAKLGANKDVIEISSLKKQIAAREETLLPLYLQIA 818 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig68707.14506.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig68707.14506.1 >prot_H-elongata_contig68707.14506.1 ID=prot_H-elongata_contig68707.14506.1|Name=mRNA_H-elongata_contig68707.14506.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=184bp DLPSPAAAATCCSRAKVWFPDSAYKTAQAINDFNRGENLPLMIFANWRGFback to top mRNA from alignment at H-elongata_contig68707:744..2497+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig68707.14506.1 ID=mRNA_H-elongata_contig68707.14506.1|Name=mRNA_H-elongata_contig68707.14506.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1754bp|location=Sequence derived from alignment at H-elongata_contig68707:744..2497+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig68707:744..2497+ >mRNA_H-elongata_contig68707.14506.1 ID=mRNA_H-elongata_contig68707.14506.1|Name=mRNA_H-elongata_contig68707.14506.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1104bp|location=Sequence derived from alignment at H-elongata_contig68707:744..2497+ (Himanthalia elongata Himel1 dioecious)back to top |