mRNA_H-elongata_contig68681.14502.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig68681.14502.1 vs. uniprot
Match: D7G3V3_ECTSI (Protein N-methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3V3_ECTSI) HSP 1 Score: 158 bits (400), Expect = 5.730e-47 Identity = 92/147 (62.59%), Postives = 102/147 (69.39%), Query Frame = 1
Query: 16 RNYPEGNQAYISYGLKSNDELLQFYGFVEADCPSDTFVAGDIAIKMGVPD-----PDKRRRDIKDADVVSKKALEGLRLLL-VNVGAGKDDAVVWGALRRVCEAELESVRPRA--VDGDGETTVRERLALKFRREKASVLQEAIQNL 432
+ Y EG QAYISYGLKSNDELLQFYGFVEADCP+DTFV D+A +GVP P K + A+VV+ + LE LR LL GAG D+ VW ALR VCEAEL VRP A GD TVRERLAL FRREKASVL EAI+NL
Sbjct: 3 KGYREGEQAYISYGLKSNDELLQFYGFVEADCPADTFVLDDVAKSLGVPGAKGGAPTKEVVIRRGAEVVNAETLEDLRALLGAEEGAGGGDSTVWTALRTVCEAELSHVRPDAQGTAGDAGRTVRERLALAFRREKASVLDEAIRNL 149
BLAST of mRNA_H-elongata_contig68681.14502.1 vs. uniprot
Match: A0A6H5KDV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDV2_9PHAE) HSP 1 Score: 155 bits (392), Expect = 4.010e-42 Identity = 91/147 (61.90%), Postives = 100/147 (68.03%), Query Frame = 1
Query: 16 RNYPEGNQAYISYGLKSNDELLQFYGFVEADCPSDTFVAGDIAIKMGVPD-----PDKRRRDIKDADVVSKKALEGLRLLL-VNVGAGKDDAVVWGALRRVCEAELESVRPRA--VDGDGETTVRERLALKFRREKASVLQEAIQNL 432
R Y EG QAYISYGLKSNDELLQFYGFVEADCP+DT+V D+A +GVP P K + A+VVS + LE LR LL G G D+ VW ALR VCEAEL VRP A GD TVRERLA FRREKASVL EAI+NL
Sbjct: 362 RGYREGEQAYISYGLKSNDELLQFYGFVEADCPADTYVLDDVAKSLGVPGAKGGAPTKEVVIRRGAEVVSAETLENLRALLGAAEGPGGGDSAVWTALRTVCEAELSQVRPDAQGAAGDAGRTVRERLASAFRREKASVLDEAIRNL 508
BLAST of mRNA_H-elongata_contig68681.14502.1 vs. uniprot
Match: A0A7S0EHX7_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0EHX7_9CRYP) HSP 1 Score: 67.4 bits (163), Expect = 2.900e-10 Identity = 50/146 (34.25%), Postives = 71/146 (48.63%), Query Frame = 1
Query: 19 NYPEGNQAYISYGLKSNDELLQFYGFVEADCPSDTFVAGDIAIKMGVPDPDKRRRDIKDADVVSKKALEGLRLLLVNVGAGKDDAVVWGALRRVCEAELESVRPRAVDGDGETTVRER--------LALKFRREKASVLQEAIQNL 432
++ G Q +ISYG +SND+LLQ+YGFVE D D + D K+ + VS K L+ + +D+A A++ V E EL+S P +D D E +R R LAL FR K +LQ+ +QNL
Sbjct: 352 DFSVGEQVFISYGDRSNDQLLQYYGFVEMDNIHDLYEVADFEGKLRSKGGQRASEPAVKTAYVSSKGLDEASMTKAK-SMFQDEASARRAVKEVLEQELQSF-PTTLDED-EVALRSRSALQTSFPLALSFRVSKKRLLQQVLQNL 494
BLAST of mRNA_H-elongata_contig68681.14502.1 vs. uniprot
Match: A0A7S4T5D2_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4T5D2_9DINO) HSP 1 Score: 59.7 bits (143), Expect = 1.490e-7 Identity = 50/155 (32.26%), Postives = 73/155 (47.10%), Query Frame = 1
Query: 22 YPEGNQAYISYG-LKSNDELLQFYGFVEADCPSDTFV-------------AGD-IAIKMGVPDPDKRRRDIKDADVVSKKALEGLRLLLVNVG-----AGKDDAVVWGALRRVCEAELESV-----RPRAVDGDGETTVRERLALKFRREKASVL 411
+ EG+Q I+YG +SND LLQ+YGFVE DCP D + AGD + +++ PD+ K+++ L LL + G + +A+ W A+ CEAEL+ + A+D G V A +FR EK VL
Sbjct: 375 FQEGDQVCINYGERRSNDALLQYYGFVERDCPHDVYCMDLLAHLDSEAASAGDTLEVELSRTGPDQ-------------KSMDELCQLLASDGGESPTSAATEALAWKAVALACEAELQRLPAGEAHELAMDVPGPAGV----AARFRAEKEKVL 512
BLAST of mRNA_H-elongata_contig68681.14502.1 vs. uniprot
Match: A0A7S3AC26_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3AC26_9RHOD) HSP 1 Score: 57.8 bits (138), Expect = 2.110e-7 Identity = 41/141 (29.08%), Postives = 74/141 (52.48%), Query Frame = 1
Query: 22 YPEGNQAYISYGLKSNDELLQFYGFVEADCPSDTFVAGDIAIKMGVPDPDKRRRDIKDADVVSKKALEGLRLLLVNVGAGKDDAVVWGA------LRRVCEAELESVRPRAVDGDGETTVRERLALKFRREKASVLQEAIQ 426
Y +G Q +ISYG +SND+LLQ+YGFVE + P D +V G+ ++ + D D+ D + + L + K + ++G +VC ELE++ P ++ D E ++ +A++FR +K +L + ++
Sbjct: 50 YKKGEQVFISYGDRSNDQLLQYYGFVEENNPHDVYVVGE-TLQSVLDSLDIDSADLSDQEKEYGPVVLFRSTLNFDTSVQKSVSKLFGEEGIKHFAEQVCLRELENM-PTTLEED-EGLKKKSIAVQFRIQKKRLLTDILK 187
BLAST of mRNA_H-elongata_contig68681.14502.1 vs. uniprot
Match: A0A7S0G0K1_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G0K1_9RHOD) HSP 1 Score: 56.6 bits (135), Expect = 2.450e-7 Identity = 41/141 (29.08%), Postives = 72/141 (51.06%), Query Frame = 1
Query: 37 QAYISYGLKSNDELLQFYGFVEADCPSDTFVAGD-IAIKMGVPDPDKRRRDIKDAD------VVSKKALEGLRLLLVNVGAGKDDAVVWGALRRVCEAELESVRPRAVDGDGETTVRERLALKFRREKASVLQEAIQNLSG 438
Q +ISYG +SND+LLQ+YGFVE D P D +V G+ + I + D D D+ D + V+ + + + +V + + +VC +EL ++R + +G + A++FR +K +L + ++N G
Sbjct: 2 QVFISYGDRSNDQLLQYYGFVEEDNPHDVYVVGETLLIVLDSLDIDSA--DLSDQEKEYGPVVLFRSTFNFDKSVQSSVSKLFGEEGIKPFAEQVCLSELANMRTTLEEDEG--LKKRSTAVQFRIQKKKLLSDILKNARG 138
BLAST of mRNA_H-elongata_contig68681.14502.1 vs. uniprot
Match: A0A7S0AKD2_9DINO (Hypothetical protein (Fragment) n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0AKD2_9DINO) HSP 1 Score: 56.6 bits (135), Expect = 2.540e-7 Identity = 39/125 (31.20%), Postives = 56/125 (44.80%), Query Frame = 1
Query: 22 YPEGNQAYISYGLK-SNDELLQFYGFVEADCPSDTF--------------VAGDIAIKMGVPDPDKRRRDIKDADVVSKKALEGLRLLLVNVGAGKDDA-------VVWGALRRVCEAELESVRP 330
+ G+Q I+YG K SND LLQ+YGFVE DCP D + + +++ PD+R D L L+ AG+D+A + W A+ CEAEL+ + P
Sbjct: 27 FDAGDQVCINYGEKRSNDTLLQYYGFVERDCPHDVYSMDILQHLDPEASSAGTTLWVELSRTGPDRRSMD---------------ELCLLLADAGEDEASSPLTEALAWRAVALACEAELQRLPP 136
BLAST of mRNA_H-elongata_contig68681.14502.1 vs. uniprot
Match: A0A7S3EP57_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EP57_9RHOD) HSP 1 Score: 57.8 bits (138), Expect = 6.320e-7 Identity = 41/141 (29.08%), Postives = 74/141 (52.48%), Query Frame = 1
Query: 22 YPEGNQAYISYGLKSNDELLQFYGFVEADCPSDTFVAGDIAIKMGVPDPDKRRRDIKDADVVSKKALEGLRLLLVNVGAGKDDAVVWGA------LRRVCEAELESVRPRAVDGDGETTVRERLALKFRREKASVLQEAIQ 426
Y +G Q +ISYG +SND+LLQ+YGFVE + P D +V G+ ++ + D D+ D + + L + K + ++G +VC ELE++ P ++ D E ++ +A++FR +K +L + ++
Sbjct: 305 YKKGEQVFISYGDRSNDQLLQYYGFVEENNPHDVYVVGE-TLQSVLDSLDIDSADLSDQEKEYGPVVLFRSTLNFDTSVQKSVSKLFGEEGIKHFAEQVCLRELENM-PTTLEED-EGLKKKSIAVQFRIQKKRLLTDILK 442
BLAST of mRNA_H-elongata_contig68681.14502.1 vs. uniprot
Match: L1JUG0_GUITC (Rubis-subs-bind domain-containing protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JUG0_GUITC) HSP 1 Score: 57.4 bits (137), Expect = 8.320e-7 Identity = 49/151 (32.45%), Postives = 76/151 (50.33%), Query Frame = 1
Query: 19 NYPEGNQAYISYGLKSNDELLQFYGFVEADCPSDTFVAGDIAIKMGVPDPDKRRRDIKDADVVSKKAL---EGLRLLLVNVGAG--KDDAVVWGALRRVCEAELESVRPRAVDGDGETTVRER--------LALKFRREKASVLQEAIQNL 432
N+ G+Q +ISYG +SND+LLQ+YGFVE D D + D+ K+ +++ ++V SK A +GL +N D+A A++ + + EL S P ++ D E +R R LAL FR K +L + +Q L
Sbjct: 256 NFNVGDQVFISYGDRSNDQLLQYYGFVEMDNVHDLYEIADLDGKL------RKKGGKGGSEVGSKDAYVSPKGLDEESMNRAKSLFPDEASARQAVKEILQDELNSF-PTTLEED-EVALRSRSALQSSFPLALSFRVSKKRLLHQVLQQL 398
BLAST of mRNA_H-elongata_contig68681.14502.1 vs. uniprot
Match: A0A2K3DH51_CHLRE (SET domain-containing protein n=3 Tax=Chlamydomonas TaxID=3052 RepID=A0A2K3DH51_CHLRE) HSP 1 Score: 57.4 bits (137), Expect = 8.880e-7 Identity = 22/42 (52.38%), Postives = 32/42 (76.19%), Query Frame = 1
Query: 16 RNYPEGNQAYISYGLKSNDELLQFYGFVEADCPSDTFVAGDI 141
R++ +G Q +I+YG +SND L+Q+YGF EAD P DT+V D+
Sbjct: 330 RDFKKGEQVFITYGAQSNDSLMQYYGFAEADNPQDTYVISDV 371 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig68681.14502.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig68681.14502.1 >prot_H-elongata_contig68681.14502.1 ID=prot_H-elongata_contig68681.14502.1|Name=mRNA_H-elongata_contig68681.14502.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=149bp MFEPQRNYPEGNQAYISYGLKSNDELLQFYGFVEADCPSDTFVAGDIAIKback to top mRNA from alignment at H-elongata_contig68681:890..2878- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig68681.14502.1 ID=mRNA_H-elongata_contig68681.14502.1|Name=mRNA_H-elongata_contig68681.14502.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1989bp|location=Sequence derived from alignment at H-elongata_contig68681:890..2878- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig68681:890..2878- >mRNA_H-elongata_contig68681.14502.1 ID=mRNA_H-elongata_contig68681.14502.1|Name=mRNA_H-elongata_contig68681.14502.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=894bp|location=Sequence derived from alignment at H-elongata_contig68681:890..2878- (Himanthalia elongata Himel1 dioecious)back to top |