mRNA_H-elongata_contig68586.14497.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig68586.14497.1
Unique NamemRNA_H-elongata_contig68586.14497.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig68586.14497.1 vs. uniprot
Match: D7FKJ4_ECTSI (Inositol-1-monophosphatase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKJ4_ECTSI)

HSP 1 Score: 191 bits (485), Expect = 1.330e-57
Identity = 93/129 (72.09%), Postives = 114/129 (88.37%), Query Frame = 1
Query:    1 SRCIDQVLTAAIGAAGEAGALMKSKIGAEIQKTKFNPKDLLTEVDAECQRIVEGVVAKEFPDHALLGEENVEPGAEASAAALEEAL-GEQGSDWLWIVDPIDGTTNFVHGMPLSAVSIGVAYKGQLVVG 384
            S+ + +VL AA+ AA EAGALMK+K+GA++ KTKFNPKDLLTEVD +CQR++E VV+K+FPDHALLGEENVEPGAEAS  AL +AL G   ++WLW+VDPIDGTTNFVHG+PLSAVSIGVAY+G++VVG
Sbjct:   67 SQTLSEVLAAAVHAASEAGALMKAKVGADVLKTKFNPKDLLTEVDGQCQRVIEKVVSKQFPDHALLGEENVEPGAEASTVALSDALDGGGAAEWLWVVDPIDGTTNFVHGIPLSAVSIGVAYRGKVVVG 195          
BLAST of mRNA_H-elongata_contig68586.14497.1 vs. uniprot
Match: A0A1Y5I7K7_OSTTA (Uncharacterized protein n=1 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A1Y5I7K7_OSTTA)

HSP 1 Score: 158 bits (399), Expect = 7.590e-46
Identity = 81/131 (61.83%), Postives = 99/131 (75.57%), Query Frame = 1
Query:   10 IDQVLTAAIGAAGEAGALMKSKIGAEIQKTKFNPKDLLTEVDAECQRIVEGVVAKEFPDHALLGEENVEPGAEASAAALEEALGEQGSDWLWIVDPIDGTTNFVHGMPLSAVSIGVAYKGQLVVGELTREF 402
            +++VL AA+ AA E G +M  K+GAE+ KTK N +DLLTEVD E QRI+E  VA+EFP H  LGEE+V  G +AS+ AL E L E G DWLW+VDPIDGTTNFVHG+PLSA+SIGVAYKG+L V  +   F
Sbjct:   52 LERVLEAAVRAAQEGGTVMARKVGAEVIKTKANARDLLTEVDGEVQRIIEAKVAEEFPHHGFLGEESVAAGKDASSDALREVL-ETGPDWLWVVDPIDGTTNFVHGLPLSAISIGVAYKGELQVAVIMDPF 181          
BLAST of mRNA_H-elongata_contig68586.14497.1 vs. uniprot
Match: A0A096PA55_OSTTA (Inositol-1-monophosphatase n=1 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A096PA55_OSTTA)

HSP 1 Score: 157 bits (398), Expect = 7.030e-45
Identity = 81/131 (61.83%), Postives = 99/131 (75.57%), Query Frame = 1
Query:   10 IDQVLTAAIGAAGEAGALMKSKIGAEIQKTKFNPKDLLTEVDAECQRIVEGVVAKEFPDHALLGEENVEPGAEASAAALEEALGEQGSDWLWIVDPIDGTTNFVHGMPLSAVSIGVAYKGQLVVGELTREF 402
            +++VL AA+ AA E G +M  K+GAE+ KTK N +DLLTEVD E QRI+E  VA+EFP H  LGEE+V  G +ASA AL E L E G +WLW+VDPIDGTTNFVHG+PLSA+SIGVAYKG+L V  +   F
Sbjct:   52 LERVLEAAVRAAKEGGTVMARKVGAEVIKTKANARDLLTEVDGEVQRIIEAKVAEEFPHHGFLGEESVAAGKDASADALREVL-ETGPEWLWVVDPIDGTTNFVHGLPLSAISIGVAYKGELQVAVIMDPF 181          
BLAST of mRNA_H-elongata_contig68586.14497.1 vs. uniprot
Match: A4S7R2_OSTLU (Uncharacterized protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S7R2_OSTLU)

HSP 1 Score: 153 bits (387), Expect = 1.940e-44
Identity = 78/120 (65.00%), Postives = 94/120 (78.33%), Query Frame = 1
Query:   16 QVLTAAIGAAGEAGALMKSKIGAEIQKTKFNPKDLLTEVDAECQRIVEGVVAKEFPDHALLGEENVEPGAEASAAALEEALGEQGSDWLWIVDPIDGTTNFVHGMPLSAVSIGVAYKGQL 375
            +VL  A+GAA E G +M  K+GA++ KTK N +DLLTEVD E QRI+E  VA+ FP+H  LGEE+V  G +ASA AL + L  QG +WLWIVDPIDGTTNFVHGMPLSA+SIGVAYKG+L
Sbjct:   32 RVLEVAVGAAKEGGIIMARKVGADVIKTKVNARDLLTEVDGEVQRIIETRVAEAFPEHGFLGEESVAAGKDASADALRDVL-RQGPNWLWIVDPIDGTTNFVHGMPLSAISIGVAYKGEL 150          
BLAST of mRNA_H-elongata_contig68586.14497.1 vs. uniprot
Match: A0A7R9XPQ2_9CHLO (Inositol-1-monophosphatase n=1 Tax=Ostreococcus sp. 'lucimarinus' TaxID=242159 RepID=A0A7R9XPQ2_9CHLO)

HSP 1 Score: 153 bits (387), Expect = 4.330e-43
Identity = 78/120 (65.00%), Postives = 94/120 (78.33%), Query Frame = 1
Query:   16 QVLTAAIGAAGEAGALMKSKIGAEIQKTKFNPKDLLTEVDAECQRIVEGVVAKEFPDHALLGEENVEPGAEASAAALEEALGEQGSDWLWIVDPIDGTTNFVHGMPLSAVSIGVAYKGQL 375
            +VL  A+GAA E G +M  K+GA++ KTK N +DLLTEVD E QRI+E  VA+ FP+H  LGEE+V  G +ASA AL + L  QG +WLWIVDPIDGTTNFVHGMPLSA+SIGVAYKG+L
Sbjct:   68 RVLEVAVGAAKEGGIIMARKVGADVIKTKVNARDLLTEVDGEVQRIIETRVAEAFPEHGFLGEESVAAGKDASADALRDVL-RQGPNWLWIVDPIDGTTNFVHGMPLSAISIGVAYKGEL 186          
BLAST of mRNA_H-elongata_contig68586.14497.1 vs. uniprot
Match: A0A7S0N011_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0N011_9CHLO)

HSP 1 Score: 154 bits (390), Expect = 6.080e-43
Identity = 79/132 (59.85%), Postives = 98/132 (74.24%), Query Frame = 1
Query:   10 IDQVLTAAIGAAGEAGALMKSKIGAEIQKTKFNPKDLLTEVDAECQRIVEGVVAKEFPDHALLGEENVEPGAEASAAALEEALGEQGS-DWLWIVDPIDGTTNFVHGMPLSAVSIGVAYKGQLVVGELTREF 402
            +D+V+  AI AA E G ++  K+GA++ KTK NP+DLLTEVD E Q I+E  V + FP H  LGEE+V PG EAS AAL++ L +  S DWLWIVDPIDGTTNFV GMPLSA+SIGVAYKG++V G +   F
Sbjct:  123 LDKVIQVAIAAAKEGGEVISRKVGADVIKTKGNPQDLLTEVDGEVQEILERAVTEAFPAHGFLGEESVPPGPEASIAALDKILNDPNSPDWLWIVDPIDGTTNFVQGMPLSAISIGVAYKGEIVAGVILDPF 254          
BLAST of mRNA_H-elongata_contig68586.14497.1 vs. uniprot
Match: A0A7S2ZV69_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZV69_9RHOD)

HSP 1 Score: 145 bits (365), Expect = 8.390e-41
Identity = 74/122 (60.66%), Postives = 91/122 (74.59%), Query Frame = 1
Query:   19 VLTAAIGAAGEAGALMKSKIGAEIQKTKFNPKDLLTEVDAECQRIVEGVVAKEFPDHALLGEENVEPGAEASAAALEEALGEQGSDWLWIVDPIDGTTNFVHGMPLSAVSIGVAYKGQLVVG 384
            VL   I AA +A + M +++GAE++KTK N +DLLTEVD ECQ I+E  +  EFPDH +LGEE    G + S  ALE AL E+  +WLWIVDPIDGTTNFVHG P+SAVSIGV YKG+LV+G
Sbjct:   48 VLGVVIRAAEDAASHMMNRVGAEVEKTKINSRDLLTEVDPECQDIIEKHMRSEFPDHGILGEETTPSGRQNSVNALETALKEK--EWLWIVDPIDGTTNFVHGQPMSAVSIGVTYKGELVLG 167          
BLAST of mRNA_H-elongata_contig68586.14497.1 vs. uniprot
Match: A0A7S2ZX97_9RHOD (Inositol-1-monophosphatase n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZX97_9RHOD)

HSP 1 Score: 145 bits (365), Expect = 5.110e-40
Identity = 74/122 (60.66%), Postives = 91/122 (74.59%), Query Frame = 1
Query:   19 VLTAAIGAAGEAGALMKSKIGAEIQKTKFNPKDLLTEVDAECQRIVEGVVAKEFPDHALLGEENVEPGAEASAAALEEALGEQGSDWLWIVDPIDGTTNFVHGMPLSAVSIGVAYKGQLVVG 384
            VL   I AA +A + M +++GAE++KTK N +DLLTEVD ECQ I+E  +  EFPDH +LGEE    G + S  ALE AL E+  +WLWIVDPIDGTTNFVHG P+SAVSIGV YKG+LV+G
Sbjct:   48 VLGVVIRAAEDAASHMMNRVGAEVEKTKINSRDLLTEVDPECQDIIEKHMRSEFPDHGILGEETTPSGRQNSVNALETALKEK--EWLWIVDPIDGTTNFVHGQPMSAVSIGVTYKGELVLG 167          
BLAST of mRNA_H-elongata_contig68586.14497.1 vs. uniprot
Match: C1E7P1_MICCC (Inositol-1-monophosphatase n=2 Tax=Micromonas TaxID=38832 RepID=C1E7P1_MICCC)

HSP 1 Score: 143 bits (361), Expect = 1.420e-39
Identity = 77/127 (60.63%), Postives = 90/127 (70.87%), Query Frame = 1
Query:   22 LTAAIGAAGEAGALMKSKIGAEIQKTKFNPKDLLTEVDAECQRIVEGVVAKEFPDHALLGEENVEPGAEASAAALEEALGEQGSDWLWIVDPIDGTTNFVHGMPLSAVSIGVAYKGQLVVGELTREF 402
            L  A  AA    A+M  K+GA++ KTK N +DLLTEVD E QRI+E  VA  FP H  LGEE+V  G EA +AA+   L + G DWLWIVDPIDGTTNFVHGMPLSA+SIGVAYKG+L VG +   F
Sbjct:   25 LKVATDAAKLGAAVMLDKLGADVVKTKANARDLLTEVDPEVQRIIESSVADAFPTHGFLGEESVPGGWEAGSAAIARLL-DTGPDWLWIVDPIDGTTNFVHGMPLSAISIGVAYKGELQVGVIMDPF 150          
BLAST of mRNA_H-elongata_contig68586.14497.1 vs. uniprot
Match: A0A7S2RQ38_9STRA (Inositol-1-monophosphatase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RQ38_9STRA)

HSP 1 Score: 143 bits (360), Expect = 6.170e-39
Identity = 72/125 (57.60%), Postives = 92/125 (73.60%), Query Frame = 1
Query:   10 IDQVLTAAIGAAGEAGALMKSKIGAEIQKTKFNPKDLLTEVDAECQRIVEGVVAKEFPDHALLGEENVEPGAEASAAALEEALGEQGSDWLWIVDPIDGTTNFVHGMPLSAVSIGVAYKGQLVVG 384
            + QVL+ A  AA +AG L++  +G+E++KTK N +DLLTEVD   QR++E  V   FP H+ LGEE+V+PG  AS+ AL   L ++G DWLW+VDPIDGTTNF  GMPLS VSIGVAY+G L VG
Sbjct:   67 VQQVLSCAEAAARQAGGLIRDGVGSEVRKTKANSRDLLTEVDGAAQRLIEDYVYGHFPGHSFLGEESVDPGQAASSNALRAVL-DKGVDWLWVVDPIDGTTNFASGMPLSTVSIGVAYRGDLQVG 190          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig68586.14497.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKJ4_ECTSI1.330e-5772.09Inositol-1-monophosphatase n=2 Tax=Ectocarpus TaxI... [more]
A0A1Y5I7K7_OSTTA7.590e-4661.83Uncharacterized protein n=1 Tax=Ostreococcus tauri... [more]
A0A096PA55_OSTTA7.030e-4561.83Inositol-1-monophosphatase n=1 Tax=Ostreococcus ta... [more]
A4S7R2_OSTLU1.940e-4465.00Uncharacterized protein n=1 Tax=Ostreococcus lucim... [more]
A0A7R9XPQ2_9CHLO4.330e-4365.00Inositol-1-monophosphatase n=1 Tax=Ostreococcus sp... [more]
A0A7S0N011_9CHLO6.080e-4359.85Hypothetical protein n=1 Tax=Pyramimonas obovata T... [more]
A0A7S2ZV69_9RHOD8.390e-4160.66Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S2ZX97_9RHOD5.110e-4060.66Inositol-1-monophosphatase n=3 Tax=Rhodosorus mari... [more]
C1E7P1_MICCC1.420e-3960.63Inositol-1-monophosphatase n=2 Tax=Micromonas TaxI... [more]
A0A7S2RQ38_9STRA6.170e-3957.60Inositol-1-monophosphatase n=1 Tax=Rhizochromulina... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig68586contigH-elongata_contig68586:2043..3120 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score196.1
Seed ortholog evalue1.1e-47
Seed eggNOG ortholog2880.D7FKJ4
KEGG rclassRC00078
KEGG koko:K01092
KEGG ReactionR01185,R01186,R01187
KEGG Pathwayko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070
KEGG ModuleM00131
EggNOG free text desc.Inositol-1-monophosphatase
EggNOG OGsCOG0483@1,KOG2951@2759
EC3.1.3.25
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionpossible L-galactose-1-phosphate phosphatase
Ec32 orthologEc-12_001850.1
Exons2
Model size402
Cds size402
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931080.5629115-CDS-H-elongata_contig68586:2042..22191622931080.5629115-CDS-H-elongata_contig68586:2042..2219Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig68586 2043..2219 +
1691679689.9155853-CDS-H-elongata_contig68586:2042..22191691679689.9155853-CDS-H-elongata_contig68586:2042..2219Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig68586 2043..2219 +
1622931080.578258-CDS-H-elongata_contig68586:2895..31201622931080.578258-CDS-H-elongata_contig68586:2895..3120Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig68586 2896..3120 +
1691679689.9293172-CDS-H-elongata_contig68586:2895..31201691679689.9293172-CDS-H-elongata_contig68586:2895..3120Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig68586 2896..3120 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig68586.14497.1prot_H-elongata_contig68586.14497.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig68586 2043..3120 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig68586.14497.1

>prot_H-elongata_contig68586.14497.1 ID=prot_H-elongata_contig68586.14497.1|Name=mRNA_H-elongata_contig68586.14497.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=134bp
SRCIDQVLTAAIGAAGEAGALMKSKIGAEIQKTKFNPKDLLTEVDAECQR
IVEGVVAKEFPDHALLGEENVEPGAEASAAALEEALGEQGSDWLWIVDPI
DGTTNFVHGMPLSAVSIGVAYKGQLVVGELTREF
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mRNA from alignment at H-elongata_contig68586:2043..3120+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig68586.14497.1 ID=mRNA_H-elongata_contig68586.14497.1|Name=mRNA_H-elongata_contig68586.14497.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1078bp|location=Sequence derived from alignment at H-elongata_contig68586:2043..3120+ (Himanthalia elongata Himel1 dioecious)
TCTCGATGCATCGATCAGGTGCTCACCGCCGCGATAGGAGCGGCCGGCGA GGCCGGGGCGCTAATGAAGTCCAAGATTGGCGCCGAAATCCAAAAGACCA AGTTCAACCCTAAGGATCTTCTCACGGAAGTCGACGCCGAGTGCCAACGC ATCGTCGAGGGCGTCGTGGCGAAAGAGGTGCTACGTGCGCTACAAAGTGT GTTTTTTTTCTTCTTCTTCTTTCCTTTGTTCTGATGGGGGCAGATCAACG TGTTGTGAAGTCTCTCCTACCGCCAACGCTGCCCCATCCCGGCTGTGGCC CTGATGGGGGTCTATCTATTTGCATATCTCTCCCCCTCAGGGTCGTAGTG CATGAGCACGGAAAAGTCTCCTCGAGTACGATACATGTTAATTGTGTGTT AAGCGTCATCTTTTCTCTTGCCGAGTGTCAACCCCCTGACGTCGGGAGGG AGAAGCTGAGAGTGATGAAGGAGAAGGCAGGCCAAGACAGACAGGCAGCG ACGAGTGTGTCGATGTCGGTATGAGTCAAGATGCTACCAAAGTAGCTTTT TTTTCATTGTTTGATTGTTTGATTCTCTACCGTAGACAGTTCCATGTGCG ACCGTGCGACCTTCTCTCTTTGTAGGAGTGCGGTGGTACACCTTCGATGC ACCGTAGTCGTTACACATAATGACGTACACACAGCAAAATATAGTTGATC CCCCATTGGGAATAGAATAGATACCGCTATACCAATGCGTGTAGCCTAGA AAGACTAGCATAACCGGGGGGCTGAATTTGCGCGATTATGTGCAATTTAA TACATACACACACATATATATAAACACACTCCCTACTGTGGAACGTTTGA CAGTTTCCGGACCACGCTCTGCTTGGAGAGGAAAATGTCGAGCCCGGTGC AGAGGCGTCAGCGGCGGCGCTTGAGGAAGCCTTGGGAGAGCAAGGATCGG ACTGGCTGTGGATCGTGGATCCCATCGACGGAACCACGAACTTTGTGCAC GGGATGCCTCTAAGTGCCGTCTCCATCGGGGTGGCTTATAAGGGGCAGCT GGTGGTGGGTGAGCTGACCCGTGAATTT
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Coding sequence (CDS) from alignment at H-elongata_contig68586:2043..3120+

>mRNA_H-elongata_contig68586.14497.1 ID=mRNA_H-elongata_contig68586.14497.1|Name=mRNA_H-elongata_contig68586.14497.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=804bp|location=Sequence derived from alignment at H-elongata_contig68586:2043..3120+ (Himanthalia elongata Himel1 dioecious)
TCTCGATGCATCGATCAGGTGCTCACCGCCGCGATAGGAGCGGCCGGCGA
GGCCGGGGCGCTAATGAAGTCCAAGATTGGCGCCGAAATCCAAAAGACCA
AGTTCAACCCTAAGGATCTTCTCACGGAAGTCGACGCCGAGTGCCAACGC
ATCGTCGAGGGCGTCGTGGCGAAAGAGTCTCGATGCATCGATCAGGTGCT
CACCGCCGCGATAGGAGCGGCCGGCGAGGCCGGGGCGCTAATGAAGTCCA
AGATTGGCGCCGAAATCCAAAAGACCAAGTTCAACCCTAAGGATCTTCTC
ACGGAAGTCGACGCCGAGTGCCAACGCATCGTCGAGGGCGTCGTGGCGAA
AGAGTTTCCGGACCACGCTCTGCTTGGAGAGGAAAATGTCGAGCCCGGTG
CAGAGGCGTCAGCGGCGGCGCTTGAGGAAGCCTTGGGAGAGCAAGGATCG
GACTGGCTGTGGATCGTGGATCCCATCGACGGAACCACGAACTTTGTGCA
CGGGATGCCTCTAAGTGCCGTCTCCATCGGGGTGGCTTATAAGGGGCAGC
TGGTGGTGGGTGAGCTGACCCGTGAATTTTTTCCGGACCACGCTCTGCTT
GGAGAGGAAAATGTCGAGCCCGGTGCAGAGGCGTCAGCGGCGGCGCTTGA
GGAAGCCTTGGGAGAGCAAGGATCGGACTGGCTGTGGATCGTGGATCCCA
TCGACGGAACCACGAACTTTGTGCACGGGATGCCTCTAAGTGCCGTCTCC
ATCGGGGTGGCTTATAAGGGGCAGCTGGTGGTGGGTGAGCTGACCCGTGA
ATTT
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