mRNA_H-elongata_contig68546.14491.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig68546.14491.1 vs. uniprot
Match: D8LC20_ECTSI (Thaumatin-domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC20_ECTSI) HSP 1 Score: 260 bits (665), Expect = 1.400e-80 Identity = 116/189 (61.38%), Postives = 134/189 (70.90%), Query Frame = 1
Query: 292 DSECQELGAQE----VCGVYEERTEGGSSLTGSLLPNVCGRLVGWAGAHTACGSITKEGGTFPNDFPYDCALMARHGTFAQLYRCEGGVYSSHACYSMDAEDSCCGCPPWDDENGYCVSTNPDWLLTAYPWAQFFKSVCPTAYSFPRDDLSSMFSCSDAQSQEGTGEDSKNTQSYRIRFCPGSSEDQFY 846
D +CQ+ +++ CG+YEER+ GG+SLTGS +P VCG+ VGW GA T+CG+ K+G TFP FPY+C L RHGT QL RC G YS+ ACY + AEDSCCGCPPWD ENG CVSTNPDW A PWA FFKS CPTAYSFPRDD +SMF CSD + KNTQSY IRFCPG SE FY
Sbjct: 302 DGDCQDSASEKEGYAFCGIYEERSNGGASLTGSAIPGVCGKPVGWIGAQTSCGTTAKDGETFPGGFPYNCDLATRHGTIKQLVRCSGSTYSTQACYLVGAEDSCCGCPPWDIENGGCVSTNPDWTNAALPWANFFKSACPTAYSFPRDDRTSMFVCSDEATDNAATIAGKNTQSYLIRFCPGDSEQSFY 490
BLAST of mRNA_H-elongata_contig68546.14491.1 vs. uniprot
Match: A0A6H5K2P7_9PHAE (WSC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K2P7_9PHAE) HSP 1 Score: 170 bits (430), Expect = 4.290e-45 Identity = 101/277 (36.46%), Postives = 140/277 (50.54%), Query Frame = 1
Query: 70 DGANIPMEIQPIDPVSKKSGNF------CGTPGY-TQVSGELAACNWSF---APDAVEGFAQDLSPYTRVVWPRDEENTTPCTNDSECQELGAQEVCGVYEERTEGGSSLTGSLLPNVCGRLVGWAGAHTACGSITKEGGTFPNDFPYDCALMARHGTFAQLYRCEGGVYSSHACYSMDAEDSCCGCPPWDDEN--------GYCVSTNPDWLLTAYPWAQFFKSVCPTAYSFPRDDLSSMFSCSDAQSQEGTGEDSKNTQSYRIRFCPGSSEDQFY 846
DG N+PM I+P +PV S CG+PG ++ C WS+ PD + G ++DLS + R+V P D ENTT CT+D EC +CGV+ +R GS G + CG + W A AC ++G TFP+ P+ C G + +Y C G + H+ Y+ A+ + CGCP W+D C NP+W+ + PW K CPTAY+FP DD +S F+C D G G + NTQSY I FCPG +E +
Sbjct: 335 DGTNLPMMIEPDNPVFPNSTEQNIMKYQCGSPGAPVSHHSKIDGCTWSYETTVPD-LHG-SEDLSQFLRLVLPEDYENTTLCTSDWEC----TTGICGVHPQRWADGS-YKGGVEQGSCGEHIAWVTAGGACAGGWEDG-TFPDAHPFFCGSEVSGGMRSHMYGCYGTTLA-HSGYTPGADTTACGCPEWEDPPYNLMAPPISDCTGINPEWVELSMPWHAHQKRACPTAYTFPYDDQTSTFTCFD-----GDGPGNPNTQSYTITFCPGDTEKNMF 597
BLAST of mRNA_H-elongata_contig68546.14491.1 vs. uniprot
Match: L8GSW0_ACACA (Thaumatin domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GSW0_ACACA) HSP 1 Score: 114 bits (286), Expect = 8.470e-26 Identity = 79/262 (30.15%), Postives = 110/262 (41.98%), Query Frame = 1
Query: 70 DGANIPMEIQPIDPVSKKSGNFCGTPGYTQVSGELAACNWSFAPDAVEGFAQDLSPYTRVVWPRDEENTTPCTNDSECQELGAQEVCGVYEERTEGGSSLTGSLLPNVCGRLVGWAGAHTACGSITKEGGTFPNDFPYDCALMARHGTFAQLYRCEGGVYSSHACYSMDAEDSCCGCPPWDDEN-------GYCVSTNPDWLLTAYPWAQFFKSVCPTAYSFPRDDLSSMFSCSDAQSQEGTGEDSKNTQSYRIRFCPGSSE 834
+G NIP+ I P+ FCG PG + +C+W +P P VW ++ C++D EC EVCG L+ L N CG+ +G+ A CG + G P+DCA +R LY C G+ S CY A +CCGC W D C + NP W+ P + K CPT+Y++P DD+SS F+CS E G N Y + FCP + +
Sbjct: 172 NGINIPLAINPLTSARTNDPFFCGNPGALRPRTPTGSCSWDLSP-----------PSPHYVWVT--QDGRGCSSDRECS---GGEVCG-----------LSTPLTLN-CGKRLGYWTADQVCGMNSNYGA------PFDCAQYSR------LYGCTNGIDS---CYQPFATSTCCGCANWQDLGVPVPSSVTRCHAINPTWVKNVQPKLLWMKKACPTSYTYPYDDMSSTFTCS-----EMVG--GLNRVDYEVVFCPPAGD 383
BLAST of mRNA_H-elongata_contig68546.14491.1 vs. uniprot
Match: A0A8H7FZC7_9AGAM (Glutaredoxin domain-containing protein n=2 Tax=Athelia sp. TMB TaxID=2748771 RepID=A0A8H7FZC7_9AGAM) HSP 1 Score: 106 bits (265), Expect = 1.840e-22 Identity = 77/240 (32.08%), Postives = 107/240 (44.58%), Query Frame = 1
Query: 73 GANIPMEIQPIDPVSKKSGNF-CGTPGYTQVSGELAACNWSFAPDAVEGFAQDLSPYTRVVWPRDEENTTPCTNDSECQELGAQEVCGVYEERTEGGSSLTGSLLPNVCGRLVGWAGAHTACGSITKEGGTFPNDFPYDCALMARHGTF----AQLYRCEGGVYSSHACYSMDAEDSCCGCPPWDD---------ENGYCVSTNPDWLLTAYPWAQFFKSVCPTAYSFPRDDLSSMFSCS 750
G ++P I P P S + CG PG + S L A +W +VE Q ++P + T C+ DS+C G+ E CG+ + G +L VCG L G+ A + CG G T+ N CA +G + + Y C +S +CY A+ +CCGC W D CV+TNP W P QF K+ CP Y+FP DD+SS F+CS
Sbjct: 152 GVSVPFSITPESPNLDSSNPYTCGNPGSSSPSAGLGAASWKVTVPSVE--YQWVTPSSATP--------TTCSADSDC---GSGENCGLVY--SSGAFNL-------VCGALSGYWTAGSVCG--INGGTTYMN-----CASALTNGPYTGTDSAFYGCGD---TSGSCYQPGADTACCGCVNWQDVLASGAVPSSTELCVNTNPTWTSIVQPTIQFLKTGCPNCYTFPYDDMSSTFTCS 359
BLAST of mRNA_H-elongata_contig68546.14491.1 vs. uniprot
Match: A0A078B3L6_STYLE (Uncharacterized protein n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A078B3L6_STYLE) HSP 1 Score: 100 bits (249), Expect = 1.380e-20 Identity = 79/271 (29.15%), Postives = 115/271 (42.44%), Query Frame = 1
Query: 70 DGANIPMEIQPIDPVSKKSGNFCGTPGYTQVSGELAACNWSFAPDAVEGFAQDLSPYTRVVWPRDEENTTPCTNDSECQELGAQEVCGVYEERTEGGSSLTGSLLPNVCGRLVGWAGAHTACGSITKEGGTFPNDFPYDCA--LMARHGTFAQ--LYRCEGGVYSSHACYSMDAEDSCCGCPPWDDEN----GY-----CVSTNPDWLLTAYPWAQFFKSVCPTAYSFPRDDLSSMFSCSDAQSQEGTGEDSKNTQSYRIRFCPGSSEDQF 843
+G ++P+ P + V+ +S CGTPG + + +C+W P + + Y V C DS+CQ G + CG+ L+ CG +G+ A CG I G P++C L A + F +Y C G +CY A DSCCGC WD+E Y CV+ N W ++ K CPTAY++P DD+SS F+C Q G S N Y++ FCP + + F
Sbjct: 168 NGIHLPVSFGPTN-VAGQSAYKCGTPGAKHPNTNVGSCSWDLQPPS--------NDYNWVT-----AGGNHCNADSDCQ--GTK--CGLSFNPGHA------DLIQKTCGNHLGYWTADQVCGVIPSFGA------PFNCQDRLPAPYSGFNNWNMYLCVG----IGSCYQPGASDSCCGCVNWDEEGVDVPSYPYTEKCVNKNSAWNDRMKNTLKWMKKACPTAYTYPYDDISSTFTC---QHMNG----SVNIVDYQVTFCPQNEQSVF 397
BLAST of mRNA_H-elongata_contig68546.14491.1 vs. uniprot
Match: J9IX81_9SPIT (Thaumatin domain-containing protein n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9IX81_9SPIT) HSP 1 Score: 99.4 bits (246), Expect = 3.720e-20 Identity = 77/268 (28.73%), Postives = 111/268 (41.42%), Query Frame = 1
Query: 70 DGANIPMEIQPIDPVSKKSGNFCGTPGYTQVSGELAACNWSFAPDAVEGFAQDLSPYTRVVWPRDEENTTPCTNDSECQELGAQEVCGVYEERTEGGSSLTGSLLPNVCGRLVGWAGAHTACGSITKEGGTFPNDFPYDCA--LMARHG--TFAQLYRCEGGVYSSHACYSMDAEDSCCGCPPWDDEN---------GYCVSTNPDWLLTAYPWAQFFKSVCPTAYSFPRDDLSSMFSCSDAQSQEGTGEDSKNTQSYRIRFCPGSSE 834
+G ++P+ P + V +S CGTPG + + C+W+ P VE Y V C+ND +C G Q+ CG+ LL CGR +G+ A CG I G P++C L + + T LY C G +CY A CCGC WD+E C + NP W ++ K CPTAY++P DD+SS F+C + Q + Y+I FCP + +
Sbjct: 169 NGIHLPISFGPTN-VGPQSAYKCGTPGAKFPTTHVGGCDWNLQPPNVE--------YNFVT-----AGGNQCSNDGQC---GGQK-CGLSFNPGHA------DLLQRTCGRHLGYWSADQVCGLIPNFGA------PFNCQDRLPSPNDGLTNWNLYACVG----VGSCYQPGASQGCCGCVNWDEEGVNVPSFPETDRCKNQNPIWHDRVKDTLKWMKKACPTAYTYPYDDISSTFTCQNIQG-------GISQVDYQITFCPQNEQ 395
BLAST of mRNA_H-elongata_contig68546.14491.1 vs. uniprot
Match: A0A7S1MTE4_NEODS (Hypothetical protein n=1 Tax=Neobodo designis TaxID=312471 RepID=A0A7S1MTE4_NEODS) HSP 1 Score: 95.9 bits (237), Expect = 2.030e-19 Identity = 69/267 (25.84%), Postives = 107/267 (40.07%), Query Frame = 1
Query: 70 DGANIPMEIQPIDPVSKKSGN-------FCGTPGYTQVSGELAACNWSFAPDAVEGFAQDLSPYTRVVWPRDEENTTPCTNDSECQELGAQEVCGVYEERTEGGSSLTGSLLPNVCGRLVGWAGAHTACG-SITKEGGTFPNDFPYDCALMARHGTFAQLYRCEGGVYSSHACYSMDAEDSCCGCPPWDD----ENGYCVSTNPDWLLTAYPWAQFFKSVCPTAYSFPRDDLSSMFSC-SDAQSQEGTGEDSKNTQSYRIRFCPGSS 831
+GAN P+ + P+ P + + C PG + +W F A + L P E T C +D++C +VCG G L + ++CG L+G CG + GT + + G QL++C S C+ + ++CCGC WDD C + NP W A P + K CPT Y++P DD +S+F+C S+A + N SY + +CP +
Sbjct: 57 NGANFPLSVTPMSPTGTFAPDPHTPDAYHCRAPGSPFAVQDTPGASWHFQQGAAMT-NRSLLPMVSYT-----EGATTCESDADCS---GGDVCGTAMATLAGKKPLN-FVHSSICGALLGVWSRDELCGWTDAIHFGTCKDQITAPITMQV--GNVEQLFQCNPPFGQS--CFQKNVNEACCGCSVWDDFIPVHTANCTTFNPLWATIAKPHIEVLKRACPTCYTYPYDDATSLFTCWSNA---------THNENSYMVEWCPSGT 300
BLAST of mRNA_H-elongata_contig68546.14491.1 vs. uniprot
Match: A0A2E5DSG6_9PROT (Thaumatin domain-containing protein (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2E5DSG6_9PROT) HSP 1 Score: 90.1 bits (222), Expect = 6.910e-17 Identity = 79/279 (28.32%), Postives = 110/279 (39.43%), Query Frame = 1
Query: 58 RQHYD-----GANIPMEIQPIDPVSKKSGNF-CGTPGYTQVSGELAACNWSFAPDAVEGFAQDLSPYTRVVWPRD--EENTTPCTNDSECQELGAQEVCGVYEERTEGGSSLTGSLLPNVCGRLVGWAGAHTACGSITKEGGTF--PNDFPYDCALMARHGTFAQLYRCEGGVYSS---HACYSMDAEDSCCGCPPWDD-------ENGYCVST-NPDWLLTAYPWAQFFKSVCPTAYSFPRDDLSSMFSCSDAQSQEGTGEDSKNTQSYRIRFCPGSS 831
R YD G ++P+++ P +P + +F CGTPG S CNW+ A SP W E TT CT +CG+ + L VCG G+ A AC + + +F + + + LY C S ++CY DA D CCGC WD C +T N +W P Q+ K+ CP+ Y++P DD SS F CSD T + N+ Y I FCPG +
Sbjct: 146 RDFYDVEVINGFHMPIQVTPNNPFNVPGDDFNCGTPGNPAGSPGYGLCNWNNAIPP--------SPKHAYYWVSSGGPECTTTCTGGK---------LCGLDNK------------LNRVCGDFQGFWSADQACAVNANKAQEYFQCKNFLTNPPYPSNTYQLSALYGCVTPSASESILNSCYIFDAPD-CCGCANWDQFGITIPASTLACKNTSNLNWTQQVQPKIQWMKATCPSYYTYPYDDASSSFRCSD------TAAGNSNSVGYTITFCPGGN 388
BLAST of mRNA_H-elongata_contig68546.14491.1 vs. uniprot
Match: A0A098G403_9GAMM (Thaumatin domain-containing protein n=1 Tax=Legionella fallonii LLAP-10 TaxID=1212491 RepID=A0A098G403_9GAMM) HSP 1 Score: 76.3 bits (186), Expect = 6.990e-12 Identity = 72/287 (25.09%), Postives = 112/287 (39.02%), Query Frame = 1
Query: 70 DGANIPMEIQPI--DPVSKKSGNF-CGTPGYTQ---VSGELAACNWSFAPDAVEGFAQDLSPYTRVVWPRDEENTTPCTNDSECQELGAQEVCGVYEERTEGGSSLTGSLLPNVCGRLVGWAGAHTACGSITKEGGTFPNDFPYDCALMARHGTFAQLYR---CE----------GGVYSSHACYSMDAEDSCCGCPPW--DDENG-----------YCVS-TNPDWLLTAYPWAQFFKSVCPTAYSFPRDDLSSMFSCSDAQSQEGTGEDSKNTQSYRIRFCPGSS 831
+G +IP+ + P+ + + N+ CG PG + +CNW A + P T+ + + C ++ + A ++CG+ S CG +G+ A C S + T N F AL T A LY C Y S+ Y+ + +CCGC W E G C+S T+P W P Q+ K+ CP+AY++P DD +S FSC++ + N+ Y I FC G+S
Sbjct: 514 NGFHIPISMAPMYYSGIPATANNYTCGIPGGYNGGVTTNGFGSCNWDNA----------IPPSTKNGYYWVTGGGSSCNINTTTTQCPAGQLCGLN------------SSFNQTCGNFLGYWSADQVC-SQSNLSSTVSNYFLCKQALPGNFPTGATLYSLMACSVPTGSTNPTYNSCYLSYPNYTAEQIQTCCGCVDWWNSSETGGVAIGANSTAASCMSQTDPQWNQYVQPMIQWMKATCPSAYTYPFDDKTSGFSCTNNLPSQ------PNSTGYLITFCEGNS 771
BLAST of mRNA_H-elongata_contig68546.14491.1 vs. uniprot
Match: A0A0A2T7V2_9GAMM (Thaumatin domain-containing protein n=2 Tax=Legionella norrlandica TaxID=1498499 RepID=A0A0A2T7V2_9GAMM) HSP 1 Score: 75.5 bits (184), Expect = 1.270e-11 Identity = 75/300 (25.00%), Postives = 106/300 (35.33%), Query Frame = 1
Query: 70 DGANIPMEIQPI------DPVSKKSGNF-CGTPGYTQVSGELAACNWSFAPDAVEGFAQDLSPYTRVVWPRDEENTTPCT-NDSECQELGAQEVCGVYEERTEGGSSLTGSLLPNVCGRLVGWAGAHTACGSITKEGGTFP----------NDFPY--------DCALMA--RHGTFAQLYRCEGGVYSSHACYSMDAEDSCCGCPPW-------------DDENGYCVS-------TNPDWLLTAYPWAQFFKSVCPTAYSFPRDDLSSMFSCSDAQSQEGTGEDSKNTQSYRIRFCPG 825
+G +IP+ +QP+ + + N+ CG PG + ACNW+ A GF W NT T +S C A +CG+ + VCG +G+ A CGS N PY D L A + T + C Y+ + YS CCGC W + G C TN W P Q+ K CP+AY++P DD +S FSC++ + N+ Y + FCPG
Sbjct: 514 NGFHIPISMQPVYYQDSTTTIYATADNYNCGVPGKETIGNGFGACNWNNATVPGNGF----------YWVTGGGNTCSITATNSGCS---ATTLCGLDNNFNQ------------VCGNFLGYWSADQVCGSNNVPAAVLEYFKCNQPLPTNTTPYYPSGAVLSDLMLCAVPKGYTGPRYNTC----YNPYPSYSSTEIAQCCGCVDWWNPDQTNNVAIGANSNTGSCTQPGHSQPQTNAQWNQYVQPMLQWMKQACPSAYTYPFDDKTSGFSCTNNLPGQ------PNSAGYIVTFCPG 778 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig68546.14491.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig68546.14491.1 >prot_H-elongata_contig68546.14491.1 ID=prot_H-elongata_contig68546.14491.1|Name=mRNA_H-elongata_contig68546.14491.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=284bp RGLHQSGIYSYGKRFGFLRRQHYDGANIPMEIQPIDPVSKKSGNFCGTPGback to top mRNA from alignment at H-elongata_contig68546:422..3266- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig68546.14491.1 ID=mRNA_H-elongata_contig68546.14491.1|Name=mRNA_H-elongata_contig68546.14491.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2845bp|location=Sequence derived from alignment at H-elongata_contig68546:422..3266- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig68546:422..3266- >mRNA_H-elongata_contig68546.14491.1 ID=mRNA_H-elongata_contig68546.14491.1|Name=mRNA_H-elongata_contig68546.14491.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1704bp|location=Sequence derived from alignment at H-elongata_contig68546:422..3266- (Himanthalia elongata Himel1 dioecious)back to top |