mRNA_H-elongata_contig6847.14482.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig6847.14482.1 vs. uniprot
Match: A0A7S2V026_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V026_9STRA) HSP 1 Score: 491 bits (1264), Expect = 2.910e-171 Identity = 242/344 (70.35%), Postives = 284/344 (82.56%), Query Frame = 1
Query: 16 SYRIETLNRLAFPKGKAPKCDLSGQPATVACITPSITLYYATEEQAEQAWHGIMHKISPLIGSLRATPPIIGSEEERARREYTVHMSKRALIDLCQQEASKFLVQGRYDLAVPGAIQVRGNNINKRSPFCLCYGQALTFSKEVFGDGSIEMVPPYLLLSEANLGLGLLQNAEEFLSTANWSILKTPHCSNAIRSQLHRNFGKLHTAQNKLGEGLEDLTKDIYCSSLEVGPEHIDASAGYFLVANIFYAQRKVENSLAFYDKVVDIWYKFLSSVRDDTSLMENVSEVQLSEGMDMLARVFNIRVNLLGDTHIATGEARSTLGLLQAFMGNREAAVEHLMSASEIY 1047
+YRIE LN LAFPKGK PKC+L+G PA V C+T ITLYYAT+E AEQAWHGIM KISPL+G LRA I+GSE++RA+R+YT+ MSKRALIDLCQQEASKFLV GRY+LAVPGAIQ AL+FSKE+FGDGSIEMVPPYLLLSEANLGLG LQ AEEFL+ ANWS+LK P CSNAIRSQLHRNFGKL+TAQ+KL + L++L +DIY SSLEVGPEH+D SAGYFLVANIFY QRK++NSLAFYDKVVDIWYKFL+SVR+D L+ N E QL+EG+DML R+ N RVNLLG++HIA GEA+ TLGLL F+GN+E A E+L++AS++Y
Sbjct: 14 NYRIEPLNTLAFPKGKIPKCELTGLPARVQCVTEHITLYYATDEHAEQAWHGIMAKISPLLGPLRAPAKIVGSEDDRAKRDYTMQMSKRALIDLCQQEASKFLVAGRYELAVPGAIQ------------------ALSFSKEIFGDGSIEMVPPYLLLSEANLGLGRLQQAEEFLAMANWSVLKNPDCSNAIRSQLHRNFGKLYTAQDKLEDALKELAQDIYSSSLEVGPEHVDTSAGYFLVANIFYKQRKIQNSLAFYDKVVDIWYKFLASVRNDEELVRNFGEAQLTEGLDMLTRILNTRVNLLGESHIAVGEAKYTLGLLHLFLGNKEVAKENLVAASDVY 339
BLAST of mRNA_H-elongata_contig6847.14482.1 vs. uniprot
Match: D7FKI4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKI4_ECTSI) HSP 1 Score: 411 bits (1056), Expect = 1.400e-141 Identity = 211/260 (81.15%), Postives = 223/260 (85.77%), Query Frame = 1
Query: 175 MHKISPLIGSLRATPPIIGSEEERARREYTVHMSKRALIDLCQQEASKFLVQGRYDLAVPGAIQVRGNNINKRSPFCLCYGQALTFSKEVFGDGSIEMVPPYLLLSEANLGLGLLQNAEEFLSTANWSILKTPHCSNAIRSQLHRNFGKLHTAQNKLGEGLEDLTKDIYCSSLEVGPEHIDASAGYFLVANIFYAQRKVENSLAFYDKVVDIWYKFLSSVRDDTSLMENVSEVQLSEGMDMLARVFNIRVNLLGDTHIAT 954
MHKISPLIG LRATP IIGSEEERARREYTV MSKRALIDLCQQEASK LVQGRYDLAVPGAIQ AL FSKE+FGDGSIE VPPYLLLSEANLGLGLLQ+AE FLS ANWSILKTP CSNAIRSQLHRNFGKLHTAQNKL E L+DL+KD+YCSSLEVGPEHID SAG+FL+ANIFYAQRKVE+SLAFYDKVVDIWYKFL+SVR+D +L ENV + QLSEGMDML RV N RVNLLGDTHIAT
Sbjct: 1 MHKISPLIGPLRATPQIIGSEEERARREYTVQMSKRALIDLCQQEASKLLVQGRYDLAVPGAIQ------------------ALAFSKEIFGDGSIETVPPYLLLSEANLGLGLLQSAEGFLSMANWSILKTPECSNAIRSQLHRNFGKLHTAQNKLDEALDDLSKDVYCSSLEVGPEHIDTSAGFFLIANIFYAQRKVESSLAFYDKVVDIWYKFLASVRNDANLAENVGKAQLSEGMDMLTRVLNTRVNLLGDTHIAT 242
BLAST of mRNA_H-elongata_contig6847.14482.1 vs. uniprot
Match: A0A7S1XU96_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XU96_9STRA) HSP 1 Score: 413 bits (1062), Expect = 9.250e-140 Identity = 201/344 (58.43%), Postives = 261/344 (75.87%), Query Frame = 1
Query: 16 SYRIETLNRLAFPKGKAPKCDLSGQPATVACITPSITLYYATEEQAEQAWHGIMHKISPLIGSLRATPPIIGSEEERARREYTVHMSKRALIDLCQQEASKFLVQGRYDLAVPGAIQVRGNNINKRSPFCLCYGQALTFSKEVFGDGSIEMVPPYLLLSEANLGLGLLQNAEEFLSTANWSILKTPHCSNAIRSQLHRNFGKLHTAQNKLGEGLEDLTKDIYCSSLEVGPEHIDASAGYFLVANIFYAQRKVENSLAFYDKVVDIWYKFLSSVRDDTSLMENVSEVQLSEGMDMLARVFNIRVNLLGDTHIATGEARSTLGLLQAFMGNREAAVEHLMSASEIY 1047
SY+IE LN LA PKGK P+C+L+G+PA +T +TLYYATEE A+ AW GI++KI+ L+G LRA ++GSEE+R++REYT+HMSKRALIDLCQQEASKFLV GR +LA+PGA+Q AL F K+V+G+G+I+MVPPYLLL+EANL L LQ AEEFLS ANW++LK P CS+AIRSQLHRNFGKL++AQ + + L +L+KD+Y S+LEVGPEHID S GYF + N FY Q+++EN+LA +DKVV+IWYKFLSSVR + +E+ SE QL+EG+DML R+ +R LLG HIATGEA T+GLL FMG + A++ + +A ++Y
Sbjct: 39 SYKIEPLNTLACPKGKIPRCELTGEPANFELVTEYLTLYYATEEHAQAAWDGIVNKIAMLLGPLRAPAGLVGSEEDRSKREYTIHMSKRALIDLCQQEASKFLVAGRGELAIPGAVQ------------------ALAFCKDVYGEGAIQMVPPYLLLAEANLDLRRLQQAEEFLSLANWTVLKNPDCSSAIRSQLHRNFGKLYSAQERFADALRELSKDVYHSALEVGPEHIDTSVGYFHMGNAFYGQQRIENALAMFDKVVEIWYKFLSSVRAEPERVEDFSEAQLNEGLDMLNRILEMRAKLLGQGHIATGEANYTVGLLLLFMGKHQDALKQVQAAHDVY 364
BLAST of mRNA_H-elongata_contig6847.14482.1 vs. uniprot
Match: A0A7S2D7B2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D7B2_9STRA) HSP 1 Score: 402 bits (1032), Expect = 3.250e-136 Identity = 197/341 (57.77%), Postives = 256/341 (75.07%), Query Frame = 1
Query: 25 IETLNRLAFPKGKAPKCDLSGQPATVACITPSITLYYATEEQAEQAWHGIMHKISPLIGSLRATPPIIGSEEERARREYTVHMSKRALIDLCQQEASKFLVQGRYDLAVPGAIQVRGNNINKRSPFCLCYGQALTFSKEVFGDGSIEMVPPYLLLSEANLGLGLLQNAEEFLSTANWSILKTPHCSNAIRSQLHRNFGKLHTAQNKLGEGLEDLTKDIYCSSLEVGPEHIDASAGYFLVANIFYAQRKVENSLAFYDKVVDIWYKFLSSVRDDTSLMENVSEVQLSEGMDMLARVFNIRVNLLGDTHIATGEARSTLGLLQAFMGNREAAVEHLMSASEIY 1047
I LN LAFPKGK P+C+L+ ATV C T +TLYYA+ E AEQAW+GI+HKI+PL+GSLR + I+GSEE+RA+REY + MSKRALI CQ+EA+KFLV GRY+LA+PGAI A+TF K++ G+G++++VPPYL L+EANLGLG L +EEFLS ANWSILK P CS IRSQLHRNFG+L+ AQ KL + L +LTKD+YC SLE GPEH+ S GY+ +A IFY Q +VE +LAFYDKV+DIWYKFL+S+R D++L E++SE QL EG+DM+ + + RV LLGD HIA+ EA+ TLGLL F+G++++A + L +A +Y
Sbjct: 16 IRPLNTLAFPKGKHPRCELTDTMATVECETRHLTLYYASREHAEQAWYGIIHKIAPLLGSLRESQAIVGSEEDRAKREYALEMSKRALITPCQEEAAKFLVSGRYELAIPGAIF------------------AITFIKDIHGNGALDLVPPYLQLAEANLGLGRLGKSEEFLSLANWSILKNPDCSQVIRSQLHRNFGRLYLAQGKLDDALRELTKDVYCLSLEKGPEHVVTSGGYYHMAGIFYTQHRVECALAFYDKVIDIWYKFLASLRSDSTLAEDISESQLQEGVDMIKYIEHTRVKLLGDDHIASAEAKYTLGLLYIFIGDKKSAFDCLTAAEAVY 338
BLAST of mRNA_H-elongata_contig6847.14482.1 vs. uniprot
Match: F0Y022_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y022_AURAN) HSP 1 Score: 362 bits (929), Expect = 8.090e-123 Identity = 174/263 (66.16%), Postives = 209/263 (79.47%), Query Frame = 1
Query: 43 LAFPKGKAPKCDLSGQPATVACITPSITLYYATEEQAEQAWHGIMHKISPLIGSLRATPPIIGSEEERARREYTVHMSKRALIDLCQQEASKFLVQGRYDLAVPGAIQVRGNNINKRSPFCLCYGQALTFSKEVFGDGSIEMVPPYLLLSEANLGLGLLQNAEEFLSTANWSILKTPHCSNAIRSQLHRNFGKLHTAQNKLGEGLEDLTKDIYCSSLEVGPEHIDASAGYFLVANIFYAQRKVENSLAFYDKVVDIWYKFLSS 831
LAFPKGK P+C+L+G PA V C+TP ITLYYAT+E AE+AWHGIMHKI+PL+G LRA ++GSEE+RA+REYT+ MSK+ALIDLC QEASKFLV GRY+LA+PGAIQ AL F K++ G+G++EM+ PYL L+EANLGLG Q AEEFLS ANWSILK P CSN +RSQLHRNFGKL++AQ KL + L +L+ DIYCSSLE GPEHID SAGY+ A++FYAQ ++EN+LAFYDKVVDIWYKFL S
Sbjct: 1 LAFPKGKLPRCELTGLPAAVQCVTPHITLYYATKEHAEEAWHGIMHKIAPLLGPLRAPSVVVGSEEDRAKREYTMEMSKKALIDLCTQEASKFLVAGRYELALPGAIQ------------------ALAFLKDIHGEGAVEMIAPYLQLAEANLGLGRFQQAEEFLSLANWSILKNPDCSNNLRSQLHRNFGKLYSAQGKLDQALVELSHDIYCSSLEAGPEHIDTSAGYYHTASVFYAQHRIENALAFYDKVVDIWYKFLVS 245
BLAST of mRNA_H-elongata_contig6847.14482.1 vs. uniprot
Match: A0A836CPP5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPP5_9STRA) HSP 1 Score: 362 bits (930), Expect = 2.450e-121 Identity = 179/289 (61.94%), Postives = 221/289 (76.47%), Query Frame = 1
Query: 19 YRIETLNRLAFPKGKAPKCDLSGQPATVACITPSITLYYATEEQAEQAWHGIMHKISPLIGSLRATPPIIGSEEERARREYTVHMSKRALIDLCQQEASKFLVQGRYDLAVPGAIQVRGNNINKRSPFCLCYGQALTFSKEVFGDGSIEMVPPYLLLSEANLGLGLLQNAEEFLSTANWSILKTPHCSNAIRSQLHRNFGKLHTAQNKLGEGLEDLTKDIYCSSLEVGPEHIDASAGYFLVANIFYAQRKVENSLAFYDKVVDIWYKFLSSVRDDTSLMENVSEVQLSE 885
YRIETLNRLAFPKG+ P C+L+G PAT+ C+TP +TLYYAT E AEQAWHGIM +ISPL+G LR PIIGS+EER R+ V MSK+AL+DLCQQEASKFL QG Y+LAVPGAIQ AL F+++ +G S+EMVP YLLLS+ANLGL LQ+AEEFLS ANW +L+ P CS+A+RSQLH+NFGKL+ AQ KL + L++L+ +YCSS+EVGPEHI SAGYFL+A++FY QRKV +LAFYDKVVDIWYK L+S+ ++ + V E QL+E
Sbjct: 13 YRIETLNRLAFPKGQNPICELTGLPATIQCVTPHVTLYYATREHAEQAWHGIMRRISPLVGPLRNPAPIIGSKEERERKALVVEMSKKALVDLCQQEASKFLTQGNYELAVPGAIQAI----------------ALAFAQDAYGAQSLEMVPAYLLLSQANLGLARLQSAEEFLSLANWVVLRNPDCSSAVRSQLHQNFGKLYRAQGKLDKALQELSSHVYCSSVEVGPEHISTSAGYFLMADVFYTQRKVNTALAFYDKVVDIWYKLLASMCHGSA--DEVPEEQLAE 283
BLAST of mRNA_H-elongata_contig6847.14482.1 vs. uniprot
Match: A0A8J2WXE0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WXE0_9STRA) HSP 1 Score: 364 bits (934), Expect = 1.330e-120 Identity = 180/344 (52.33%), Postives = 239/344 (69.48%), Query Frame = 1
Query: 19 YRIETLNRLAFPKGKAPKCDLSGQPATVACITPSITLYYATEEQAEQAWHGIMHKISPLIGSLRATPPIIGSEEERARREYTVHMSKRALIDLCQQEASKFLVQGRYDLAVPGAIQVRGNNINKRSPFCLCYGQALTFSKEVFGDGSIEMVPPYLLLSEANLGLGLLQNAEEFLSTANWSILKTPHCSNAIRSQLHRNFGKLHTAQNKLGEGLEDLTKDIYCSSLEVGPEHIDASAGYFLVANIFYAQRKVENSLAFYDKVVDIWYKFLSSVRDDTSLMENVSEVQLSEGMDMLARVFNIRVNLLGDTHIATGEARSTLGLLQAFMG-NREAAVEHLMSASEIY 1047
Y++ + +A+PKG+AP C+++G PA + C T ITL+Y E AE++WHGIM KI+PL+G LR+ P +IGSEE+R +REYT+ +SK+AL+DLC QEA KFLV GR++LA+PGA Q + F E++GDG++E+V YL ++EAN+GL Q AE+FLS ANWSILK P SNA+RS+LHRNFGK++ A+ KL E L++L KDIYCSSL GPEH+DAS GYF A++FYAQ ++E++LAFYDKVVD WYKFL R D + +V E E +DML RV R LLGD H+ATGEA+ LGLL F G + A E + A++ Y
Sbjct: 17 YKLVDILPMAYPKGQAPVCEMTGLPAKIKCETEHITLFYNNRETAEESWHGIMGKIAPLLGPLRSPPNVIGSEEDRRKREYTLDLSKKALVDLCGQEADKFLVAGRFELALPGA------------------QQEMKFLTELYGDGAVELVAAYLRMAEANVGLARYQQAEQFLSMANWSILKNPDASNALRSKLHRNFGKVYAARGKLDEALDELAKDIYCSSLASGPEHVDASPGYFHAASVFYAQHRIEHALAFYDKVVDAWYKFLVQCRSDPDVGRDVGEAARREAVDMLRRVLATRAKLLGDAHVATGEAKYALGLLHLFNGTDLNEARELVKDAAQTY 342
BLAST of mRNA_H-elongata_contig6847.14482.1 vs. uniprot
Match: A0A2R5GGV2_9STRA (Zinc finger MYND domain-containing protein 12 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GGV2_9STRA) HSP 1 Score: 333 bits (853), Expect = 2.040e-109 Identity = 173/350 (49.43%), Postives = 231/350 (66.00%), Query Frame = 1
Query: 1 ESHQKSYRIETLNRLAFPKGKAPKCDLSGQPATVACITPSITLYYATEEQAEQAWHGIMHKISPLIGSLRATPPIIGSEEERARREYTVHMSKRALIDLCQQEASKFLVQGRYDLAVPGAIQVRGNNINKRSPFCLCYGQALTFSKEVFGDGSIEMVPPYLLLSEANLGLGLLQNAEEFLSTANWSILKTPHCSNAIRSQLHRNFGKLHTAQNKLGEGLEDLTKDIYCSSLEVGPEHIDASAGYFLVANIFYAQRKVENSLAFYDKVVDIWYKFLSSVRDDTSLMENVSEVQLSEGMDMLARVFNIRVNLLGDTHIATGEARSTLGLLQAFMGNR-EAAVEHLMSASEIY 1047
+S + YRIETLN L+ PKG C+L+G A V ITP +LYY ++E A +W GIMHK+ PL+ LRA P IIGSEEER +REY++ MSKRAL+DL Q+ A +FL++G Y+L++PGA+Q L+FSKEV+GD +I++VP YLLL++ +LG+ + +EFL ANWS+LKTP C N I++QL R FGKL A+ K E E L KDIY +SL GPEH+ S GYF +A +F AQ +VE +LA YDKVVDIWYK+LS+VR + +SE Q E M ML ++ ++R LGD HIATGEA TLGLL+ M + A + + +A +Y
Sbjct: 19 QSKVQGYRIETLNALSAPKGVRYVCELTGVAAGVKMITPFTSLYYGSKEDAILSWEGIMHKLLPLVSQLRAKPVIIGSEEERQKREYSILMSKRALVDLTQRIAQRFLIKGEYELSIPGAMQ------------------CLSFSKEVYGDDTIDLVPAYLLLAQCHLGMRNFRPVQEFLGLANWSVLKTPDCPNEIKAQLERTFGKLCAAEGKHAEAAEHLAKDIYWTSLASGPEHVKVSVGYFNLACVFDAQHRVEAALALYDKVVDIWYKYLSAVRMSGDDTDPLSEAQCEEAMQMLLKILDVRRQFLGDNHIATGEAHFTLGLLRLLMERELDVAKQSIATAHSLY 350
BLAST of mRNA_H-elongata_contig6847.14482.1 vs. uniprot
Match: A0A7S3JYP9_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JYP9_9STRA) HSP 1 Score: 332 bits (851), Expect = 2.210e-107 Identity = 171/362 (47.24%), Postives = 235/362 (64.92%), Query Frame = 1
Query: 19 YRIETLNRLAFPKGKAPKCDLSGQPATVACITPSITLYYATEEQAEQAWHGIMHKISPLIGSLRATPPIIGSEEERARREYTVHMSKRALIDLCQQEASKFLVQGRYDLAVPGAIQVRGNNINKRSPFCLCYGQALTFSKEVFGDGSIEMVPPYLLLSEANLGLGLLQNAEEFLSTANWSILKTPHCSNAIRSQLHRNFGKLHTAQNKLGEGLEDLTKDIYCSSLEVGPEHIDASAGYFLVANIFYAQRKVENSLAFYDKVVDIWYKFLSSVR--------------DDTSLMENVSEVQLSEGMDMLARVFNIRVNLLGDTHIATGEARSTLGLLQAFMGNREA-----AVEHLMSASEIY 1047
YRIE LN LAFPKG+ P+C+L+G ATVAC+TP +TLYY + + A++AW GIMHKI+PL+G LR P ++G+EE+RARR Y MSK+AL+DLC +EA KF++ G+Y+LAVP ++Q AL +++ +G I+ + P L+EA+LGL ++AE FL A+ I K P C+N IRS+LHR GKL+ AQNK + L +L KD+YC+SL GPE I + GYF A++FYAQ ++E +LAFYDK+VDIW+KFL++ + DD +L NVS QL+ DMLA+V R LLG+ HIA+ EA+ TLGLL F ++ A+ HL A +IY
Sbjct: 12 YRIEKLNSLAFPKGQLPRCELTGNAATVACVTPWLTLYYESTQHADEAWRGIMHKIAPLLGPLRKPPIVVGTEEDRARRAYAQEMSKKALVDLCVEEADKFILLGKYELAVPASLQ------------------ALNLLHDLYSEGCIQSLEPLSQLAEASLGLNRHKSAEIFLGRASCCIYKHPECTNEIRSKLHRQQGKLYLAQNKFDQALNELAKDVYCASLFYGPESIQVAPGYFYAASVFYAQHRIEQALAFYDKLVDIWFKFLANAQNKHANKNQSSFSTIDDNTLPNNVSRAQLALAADMLAKVHATRAKLLGNQHIASAEAKYTLGLLFLFQNPQDKSTIQIALLHLNEAKDIY 355
BLAST of mRNA_H-elongata_contig6847.14482.1 vs. uniprot
Match: A0A7S0HHB8_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HHB8_9EUKA) HSP 1 Score: 280 bits (715), Expect = 4.230e-89 Identity = 146/325 (44.92%), Postives = 210/325 (64.62%), Query Frame = 1
Query: 85 GQPATVACITPSITLYYATEEQAEQAWHGIMHKISPLIGSLRATPPIIGSEEERARREYTVHMSKRALIDLCQQEASKFLVQGRYDLAVPGAIQVRGNNINKRSPFCLCYGQALTFSKEVFGDGSIEMVPPYLLLSEANLGLGLLQNAEEFLSTANWSILKTPHCSNAIRSQLHRNFGKLHTAQNKLGEGLEDLTKDIYCSSLEVGPEHIDASAGYFLVANIFYAQRKVENSLAFYDKVVDIWYKFLSSV----RDDTSLMENVSEVQLSEGMDMLARVFNIRVNLLGDTHIATGEARSTLGLLQAFMGNREAAVEHLMSASEIY 1047
G+PA V+ ++P +++++A+ E A AW G++ K++ ++G L PP+ SEEER RR V +KRALI +C+ EA++ +VQGRY+LA+P A AL F ++G+G +E+VP L+L+EANLGL AE +L+ ANW +LKT +CSNA+RSQL RNFGKL+ +Q + E L L D+Y SSL VGPEHID S GYF + N+F+A +VEN+LA YDKVVDIWYK L+SV D + M +SE + SEG++ML+++ R +G+T++ATGE+ LGLL + G + A + +A IY
Sbjct: 1 GKPALVSLVSPFLSIHFASRELATHAWEGVIRKVAHVLGPLLTPPPLASSEEERHRRFEGVQATKRALIAMCRDEAARHVVQGRYELAIPAA------------------AYALRFGTSIYGEGRVELVPALLMLAEANLGLLHYGEAESYLTKANWVLLKTANCSNALRSQLRRNFGKLYASQGRYEEALRQLADDVYYSSLMVGPEHIDTSGGYFQLGNVFFAMNRVENALAMYDKVVDIWYKCLASVLAAKADGPAPM--LSEAKGSEGIEMLSQILKRREECVGETNLATGESSYILGLLHQYFGEVQQAQARMHAALGIY 305 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6847.14482.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig6847.14482.1 >prot_H-elongata_contig6847.14482.1 ID=prot_H-elongata_contig6847.14482.1|Name=mRNA_H-elongata_contig6847.14482.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=349bp ESHQKSYRIETLNRLAFPKGKAPKCDLSGQPATVACITPSITLYYATEEQback to top mRNA from alignment at H-elongata_contig6847:988..3369+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig6847.14482.1 ID=mRNA_H-elongata_contig6847.14482.1|Name=mRNA_H-elongata_contig6847.14482.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2382bp|location=Sequence derived from alignment at H-elongata_contig6847:988..3369+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig6847:988..3369+ >mRNA_H-elongata_contig6847.14482.1 ID=mRNA_H-elongata_contig6847.14482.1|Name=mRNA_H-elongata_contig6847.14482.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2094bp|location=Sequence derived from alignment at H-elongata_contig6847:988..3369+ (Himanthalia elongata Himel1 dioecious)back to top |