mRNA_H-elongata_contig68262.14451.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig68262.14451.1
Unique NamemRNA_H-elongata_contig68262.14451.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
[Close]
BLAST of mRNA_H-elongata_contig68262.14451.1 vs. uniprot
Match: D7FQE0_ECTSI (Polynucleotide adenylyltransferase (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQE0_ECTSI)

HSP 1 Score: 504 bits (1299), Expect = 2.550e-176
Identity = 237/287 (82.58%), Postives = 266/287 (92.68%), Query Frame = 1 
Query:    1 KQSVLRMLLGLVKDWSFKVAAQNGISREEVSPATLKTFGSYHLGVHTPEADIDVLCLAPRHCTRLAFFTSFCDMLDVHPEVEELFPVQEAYTPVIKFKAQGVNIDMLFCSLHYARLPSMCDVHIEEHLRFLDDAGVRSLNGVRVSELILTLVPNHGAFRTTLRAVKEWARRRGIYSNVLGCLGGVNWAILVAFVVQRYPNASPSVLMSKFFLMYHRWKWPNHVSLNELQSLKENSLAEG--FPMHTVWNPVTNPRDKAHLMPIITPAYPAMNSSYNVGEPQMRLIRQ 855
            +++VL MLL LVK+WS K+AA+ G+ +EEVSPATLKTFGSYHLGVHTP+ADIDVLCLAPRHC+R +FFTSFC +L  H E++ELFPV EAYTPVIKFKAQGV+IDMLFCSLHY +LP +C+VH++EHLR LDDAGVRSLNGVRV+ELIL+LVPNH AFRTTLRAVKEWARRRGIYSNVLGCLGGVNWAILVAFVVQRYPNASPSVL++KFFLMYHRWKWPNHVSLNELQSL+E ++ EG  FP+H VWNPV NPRDKAHLMPIITPAYPAMNSSYNVGEPQMRLIR+
Sbjct:   50 RKAVLLMLLKLVKEWSGKIAAEEGLDKEEVSPATLKTFGSYHLGVHTPDADIDVLCLAPRHCSRESFFTSFCQILRNHTEIDELFPVPEAYTPVIKFKAQGVSIDMLFCSLHYPKLPRLCNVHVQEHLRHLDDAGVRSLNGVRVAELILSLVPNHQAFRTTLRAVKEWARRRGIYSNVLGCLGGVNWAILVAFVVQRYPNASPSVLLTKFFLMYHRWKWPNHVSLNELQSLQETNVTEGHPFPLHAVWNPVANPRDKAHLMPIITPAYPAMNSSYNVGEPQMRLIRE 336
[Close]
BLAST of mRNA_H-elongata_contig68262.14451.1 vs. uniprot
Match: A0A6H5KWQ1_9PHAE (Polynucleotide adenylyltransferase (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ1_9PHAE)

HSP 1 Score: 510 bits (1313), Expect = 3.640e-174
Identity = 240/287 (83.62%), Postives = 267/287 (93.03%), Query Frame = 1 
Query:    1 KQSVLRMLLGLVKDWSFKVAAQNGISREEVSPATLKTFGSYHLGVHTPEADIDVLCLAPRHCTRLAFFTSFCDMLDVHPEVEELFPVQEAYTPVIKFKAQGVNIDMLFCSLHYARLPSMCDVHIEEHLRFLDDAGVRSLNGVRVSELILTLVPNHGAFRTTLRAVKEWARRRGIYSNVLGCLGGVNWAILVAFVVQRYPNASPSVLMSKFFLMYHRWKWPNHVSLNELQSLKENSLAEG--FPMHTVWNPVTNPRDKAHLMPIITPAYPAMNSSYNVGEPQMRLIRQ 855
            +Q+VLRMLL LVK+WS K+AA+ G+ +EEVS ATLKTFGSYHLGVHTP+ADIDVLCLAPRHC+R +FFTSFC +L  H E++ELFPV EAYTPVIKFKAQGV+IDMLFCSLHY +LP  C+VH+EEHLR+LDDAGVRSLNGVRV+ELIL+LVPNH AFRTTLRAVKEWARRRGIYSNVLGCLGGVNWAILVAFVVQRYPNASPSVL++KFFLMYHRWKWPNHVSLNELQSL+E +  EG  FP+HTVWNPV+NPRDKAHLMPIITPAYPAMNSSYNVGEPQMRLIR+
Sbjct:   50 RQAVLRMLLNLVKEWSGKIAAEEGLDKEEVSTATLKTFGSYHLGVHTPDADIDVLCLAPRHCSRESFFTSFCQILRNHTEIDELFPVPEAYTPVIKFKAQGVSIDMLFCSLHYPKLPRQCNVHVEEHLRYLDDAGVRSLNGVRVAELILSLVPNHEAFRTTLRAVKEWARRRGIYSNVLGCLGGVNWAILVAFVVQRYPNASPSVLLTKFFLMYHRWKWPNHVSLNELQSLQETNATEGHPFPLHTVWNPVSNPRDKAHLMPIITPAYPAMNSSYNVGEPQMRLIRE 336
[Close]
BLAST of mRNA_H-elongata_contig68262.14451.1 vs. uniprot
Match: A0A836C8Y5_9STRA (Poly(A) polymerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8Y5_9STRA)

HSP 1 Score: 350 bits (897), Expect = 5.130e-116
Identity = 173/287 (60.28%), Postives = 209/287 (72.82%), Query Frame = 1 
Query:    1 KQSVLRMLLGLVKDWSFKVAAQNGISREEV-SPATLKTFGSYHLGVHTPEADIDVLCLAPRHCTRLAFFTSFC-DMLDVHPEVEELFPVQEAYTPVIKFKAQGVNIDMLFCSLHYARLPSMCDVHIEEHLRFLDDAGVRSLNGVRVSELILTLVPNHGAFRTTLRAVKEWARRRGIYSNVLGCLGGVNWAILVAFVVQRYPNASPSVLMSKFFLMYHRWKWPNHVSLNELQSLKENSLAEGFPMHTVWNPVTNPRDKAHLMPIITPAYPAMNSSYNVGEPQMRLIRQ 855
            ++SV+  L  + + WS  +    GI  + V S ATL+TFGSY LGV+TP+ADID L L PRHC R  FF SFC D L    +V E+FPV EAYTPV+KFK + V +DMLFCSL +A+LP   DV  + HLR LD  GVRSLNGVRV+ELIL LVPN   FRT LRA+KEWARRRGIYSNVLGCLGGVNWAILVAFV Q+YPNA+PS L+ + F +Y +W WP  + +   +       AEG   H VWNP  + RD+AHLMPI+TPAYPAMNSSYNVGEPQ+RL+++
Sbjct:   61 RESVIADLEAMAQQWSKDLGRSRGIEEQAVQSVATLRTFGSYRLGVNTPDADIDCLLLCPRHCAREDFFNSFCRDYLATRDDVSEVFPVPEAYTPVMKFKMRDVPVDMLFCSLQHAQLPRPLDVQEDRHLRDLDAEGVRSLNGVRVAELILQLVPNQTTFRTALRAIKEWARRRGIYSNVLGCLGGVNWAILVAFVCQKYPNAAPSTLLHRLFRLYFKWSWPMPILITPTRE----EPAEGCTPHAVWNPKVDLRDRAHLMPIVTPAYPAMNSSYNVGEPQLRLLKE 343
[Close]
BLAST of mRNA_H-elongata_contig68262.14451.1 vs. uniprot
Match: A0A067CCL2_SAPPC (Poly(A) polymerase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CCL2_SAPPC)

HSP 1 Score: 306 bits (783), Expect = 6.450e-98
Identity = 158/289 (54.67%), Postives = 203/289 (70.24%), Query Frame = 1 
Query:    1 KQSVLRMLLGLVKDWSFKVAAQNGISREEVSPAT----LKTFGSYHLGVHTPEADIDVLCLAPRHCTRLAFFTSFCDMLDVHPEVEELFPVQEAYTPVIKFKAQGVNIDMLFCSLHYARLPSMCDVHIEEHLRFLDDAGVRSLNGVRVSELILTLVPNHGAFRTTLRAVKEWARRRGIYSNVLGCLGGVNWAILVAFVVQRYPNASPSVLMSKFFLMYHRWKWPNHVSLNEL-QSLKENSLAEGFPMHTVWNPVTNPRDKAHLMPIITPAYPAMNSSYNVGEPQMRLIR 852
            ++  L ++ GLV++W+   AA+ G++ EE  PAT    ++TFGSY LGVH+PEADID LCL PRHC R +FF +F   L  HPEV  +  V +AY PVIKFK  G++ID+LF +L+ A +P   DV   ++L  +D+ GVRSLNG RV+E+IL LVPN   FRTTL AVK WAR RGIYSNVLG LGGVNWAILVA V Q YP +    L++KFF +YH+W WPN + LN + +SL + S+         WNP  NPRD++HLMPIITPAYPAMNSSYNV E  + +++
Sbjct:   48 REKALDVVRGLVEEWATAEAAKLGVTLEE--PATCFSQIRTFGSYRLGVHSPEADIDTLCLMPRHCLRTSFFQTFPSRLQEHPEVASVQSVPDAYVPVIKFKLSGISIDLLFATLNVAAVPVDIDVLDVKYLVDVDEPGVRSLNGCRVAEMILQLVPNIEQFRTTLVAVKHWARMRGIYSNVLGFLGGVNWAILVARVCQLYPQSLAGTLLTKFFRVYHQWTWPNPILLNRIDESLGDLSIP-------TWNPKLNPRDRSHLMPIITPAYPAMNSSYNVLESTLAMMK 327
[Close]
BLAST of mRNA_H-elongata_contig68262.14451.1 vs. uniprot
Match: A0A1V9YEI6_9STRA (Poly(A) polymerase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YEI6_9STRA)

HSP 1 Score: 299 bits (765), Expect = 3.960e-95
Identity = 155/289 (53.63%), Postives = 199/289 (68.86%), Query Frame = 1 
Query:    1 KQSVLRMLLGLVKDWSFKVAAQNGISREEVSPAT----LKTFGSYHLGVHTPEADIDVLCLAPRHCTRLAFFTSFCDMLDVHPEVEELFPVQEAYTPVIKFKAQGVNIDMLFCSLHYARLPSMCDVHIEEHLRFLDDAGVRSLNGVRVSELILTLVPNHGAFRTTLRAVKEWARRRGIYSNVLGCLGGVNWAILVAFVVQRYPNASPSVLMSKFFLMYHRWKWPNHVSLNELQSLK-ENSLAEGFPMHTVWNPVTNPRDKAHLMPIITPAYPAMNSSYNVGEPQMRLIR 852
            ++  L  +  LV++W+   AA+ G++ E  +PAT    ++TFGSY LGVH+PEADID LCL PRHC R+ FF +F   L  HP V  +  V +AY PVIKFK  G++ID+LF +L  + +PS  DV   +HL  +D+ GVRSLNG RV+E+IL LVPN   FRTTL AVK WAR RGIYSNVLG LGGVNWAILVA V Q YP +    L++KF+ +YH+W WPN + LN L + + E ++A        WNP  NPRD+ HLMPIITPAYPAMNSSYNV E  + +++
Sbjct:   61 REKALGTVKSLVEEWAVDEAAKAGVTLE--APATRFSQVRTFGSYRLGVHSPEADIDTLCLMPRHCLRINFFQAFPSRLQAHPAVTGVQSVPDAYVPVIKFKVHGISIDLLFVTLALSAVPSDLDVLDSKHLVEVDEQGVRSLNGCRVAEMILQLVPNLEQFRTTLVAVKHWARMRGIYSNVLGFLGGVNWAILVARVCQLYPQSLAGPLLTKFYRVYHQWTWPNPILLNRLDAPQPELAIAS-------WNPKLNPRDRGHLMPIITPAYPAMNSSYNVLECTLHMMK 340
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BLAST of mRNA_H-elongata_contig68262.14451.1 vs. uniprot
Match: A0A8K1CNK2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CNK2_PYTOL)

HSP 1 Score: 295 bits (754), Expect = 2.260e-93
Identity = 146/287 (50.87%), Postives = 199/287 (69.34%), Query Frame = 1 
Query:    1 KQSVLRMLLGLVKDWSFKVAAQNGISREEV--SPATLKTFGSYHLGVHTPEADIDVLCLAPRHCTRLAFFTSFCDMLDVHPEVEELFPVQEAYTPVIKFKAQGVNIDMLFCSLHYARLPSMCDVHIEEHLRFLDDAGVRSLNGVRVSELILTLVPNHGAFRTTLRAVKEWARRRGIYSNVLGCLGGVNWAILVAFVVQRYPNASPSVLMSKFFLMYHRWKWPNHVSLNELQSLKENSLAEGFPMHTVWNPVTNPRDKAHLMPIITPAYPAMNSSYNVGEPQMRLIRQ 855
            +++VL  L  ++++++       G++ +        LKT+GSY L VH+PEADID LC+AP+HCTR +FF     +L+  P V+++  V +AYTPVI  K  G+ +D++F SL    +P   DV  ++HLR LD++ VRSLNGVRV+E IL LVP    FR+TL AVK WAR RGIYSN LG LGGVNWAILVA + Q YPNA P+ L++KFF +YH W WPN + L+    +  N+   GFP   VWNP+TNPRD+AHLMPIITPAYPAMNSSY+V +  ++++++
Sbjct:   52 RETVLAKLREVLQEYAVHEGCLKGMNEDAAMDKKVQLKTYGSYRLQVHSPEADIDTLCIAPKHCTRASFFQKVPILLEATPGVKQVLAVPDAYTPVINMKIDGIAVDLIFVSLPMESIPEDIDVLDDKHLRNLDESSVRSLNGVRVTERILQLVPRQDRFRSTLMAVKYWARLRGIYSNKLGFLGGVNWAILVARICQLYPNALPATLLAKFFRIYHLWAWPNPILLD----VASNTPNMGFP---VWNPMTNPRDRAHLMPIITPAYPAMNSSYSVTQATLQILKR 331
[Close]
BLAST of mRNA_H-elongata_contig68262.14451.1 vs. uniprot
Match: A0A2D4CC13_PYTIN (Polynucleotide adenylyltransferase (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CC13_PYTIN)

HSP 1 Score: 294 bits (752), Expect = 6.070e-93
Identity = 153/286 (53.50%), Postives = 194/286 (67.83%), Query Frame = 1 
Query:    1 KQSVLRMLLGLVKDWSFKVAAQNGISREEVSP--ATLKTFGSYHLGVHTPEADIDVLCLAPRHCTRLAFFTSFCDMLDVHPEVEELFPVQEAYTPVIKFKAQGVNIDMLFCSLHYARLPSMCDVHIEEHLRFLDDAGVRSLNGVRVSELILTLVPNHGAFRTTLRAVKEWARRRGIYSNVLGCLGGVNWAILVAFVVQRYPNASPSVLMSKFFLMYHRWKWPNHVSLNELQSLKENSLAEGFPMHTVWNPVTNPRDKAHLMPIITPAYPAMNSSYNVGEPQMRLIR 852
            ++ VL  L  ++++++       G+S E+       L+TFGSY LGVH PEADID LC+APRHCTR +FF     +L+    V+ L  + +A+ PVIKFK  G  +D+LF +L    +PS  ++  ++ LR LD+  VRSLNGVRV+E I+ LVPN   FRTTL  VK WAR RGIYSNVLG LGGVNWAILVA V Q YPNA P+ L+ KFF +YH W WPN V L+ +     NS   GF   TVWNP+TNPRD++HLMPIITPAYP+MNSSYNV    +R+IR
Sbjct:   55 RERVLSKLREVLQEYALHEGCLXGMSEEDAVSKLVQLRTFGSYRLGVHAPEADIDTLCIAPRHCTRTSFFQKVPILLEATAGVKHLHVISDAFVPVIKFKLMGFAVDLLFVALSMDSIPSDLNILDDQLLRDLDEQSVRSLNGVRVTERIIQLVPNGDHFRTTLTIVKHWARVRGIYSNVLGFLGGVNWAILVARVCQLYPNALPATLLGKFFRVYHLWSWPNPVLLDNVV----NSPNMGF---TVWNPMTNPRDRSHLMPIITPAYPSMNSSYNVLPCTLRMIR 333
[Close]
BLAST of mRNA_H-elongata_contig68262.14451.1 vs. uniprot
Match: A0A024TB13_9STRA (Poly(A) polymerase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TB13_9STRA)

HSP 1 Score: 289 bits (740), Expect = 8.030e-93
Identity = 148/284 (52.11%), Postives = 193/284 (67.96%), Query Frame = 1 
Query:    1 KQSVLRMLLGLVKDWSFKVAAQNGISREEVSPATLKTFGSYHLGVHTPEADIDVLCLAPRHCTRLAFFTSFCDMLDVHPEVEELFPVQEAYTPVIKFKAQGVNIDMLFCSLHYARLPSMCDVHIEEHLRFLDDAGVRSLNGVRVSELILTLVPNHGAFRTTLRAVKEWARRRGIYSNVLGCLGGVNWAILVAFVVQRYPNASPSVLMSKFFLMYHRWKWPNHVSLNELQSLKENSLAEGFPMHTVWNPVTNPRDKAHLMPIITPAYPAMNSSYNVGEPQMRLIR 852
            +++ L ++   V+ W+   A + G+  +  S   ++TFGSY LGVH+PEADID LCLAPRHC+RL FFTSF  +L    +V  +  + +AY PVIKF+  GV ID+LF +L  A +P   D+   + LR +D+ GVRSLNG RV+E+IL LVPN   FR TL AVK WAR RGIYSNVLG LGGVNWAILVA V Q YP +    L++KFF +YH+W WPN + LN +    +   AE   + + WNP   PRD+ HLMPIITPA+PAMNSSYNV +  +RL++
Sbjct:   49 RENALELVGAWVEQWAQNEATKRGLVVDATSLTQIRTFGSYRLGVHSPEADIDTLCLAPRHCSRLGFFTSFPLLLKHQAQVTSVHSIPDAYVPVIKFQVLGVAIDLLFVALDVASVPEDIDLLDPKTLRDVDEPGVRSLNGCRVAEMILQLVPNLDQFRLTLVAVKHWARMRGIYSNVLGFLGGVNWAILVARVCQLYPQSLAGTLLTKFFRVYHQWIWPNPILLNNIMD-DDGKHAELHHLQS-WNPKLYPRDRLHLMPIITPAFPAMNSSYNVLDCTLRLMQ 330
[Close]
BLAST of mRNA_H-elongata_contig68262.14451.1 vs. uniprot
Match: A0A6G0XG51_9STRA (Poly(A) polymerase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XG51_9STRA)

HSP 1 Score: 292 bits (747), Expect = 1.930e-92
Identity = 152/285 (53.33%), Postives = 194/285 (68.07%), Query Frame = 1 
Query:    1 KQSVLRMLLGLVKDWSFKVAAQNGISREEVSPAT-LKTFGSYHLGVHTPEADIDVLCLAPRHCTRLAFFTSFCDMLDVHPEVEELFPVQEAYTPVIKFKAQGVNIDMLFCSLHYARLPSMCDVHIEEHLRFLDDAGVRSLNGVRVSELILTLVPNHGAFRTTLRAVKEWARRRGIYSNVLGCLGGVNWAILVAFVVQRYPNASPSVLMSKFFLMYHRWKWPNHVSLNELQSLKENSLAEGFPMHTVWNPVTNPRDKAHLMPIITPAYPAMNSSYNVGEPQMRLIR 852
            ++ VL+M    V++W+   A + G+  ++++P T L+TFGSY LGVH+PEADID LCLAPRHC R AFFT+F  +L  H  V  +  + +AY PVIKFK   V ID+LF +L  A +P   D+   ++L  +D+ GVRSLNG RV+E+IL LVPN   FRTTL AVK WAR RGIYSNVLG LGG+NWAILVA V Q YP +    L++KFF +YH+W WPN + LN L    ++ L         WNP   PRD+ HLMPIITPAYPAMNSSYNV    +RL++
Sbjct:   49 REKVLKMTGEWVEEWADSEATKRGL--DKIAPFTQLRTFGSYRLGVHSPEADIDTLCLAPRHCIRTAFFTTFPSLLKQHECVSSIQSIPDAYVPVIKFKVDDVAIDLLFVTLDLAFVPKDIDLLDTKYLIDVDEPGVRSLNGCRVAEMILQLVPNVDQFRTTLVAVKHWARMRGIYSNVLGFLGGINWAILVARVCQLYPQSLAGTLLTKFFRVYHQWIWPNPILLNNLIDDAQSHLELNLQ---AWNPKLYPRDRLHLMPIITPAYPAMNSSYNVLNCTLRLMQ 328
[Close]
BLAST of mRNA_H-elongata_contig68262.14451.1 vs. uniprot
Match: A0A024TBD6_9STRA (Poly(A) polymerase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TBD6_9STRA)

HSP 1 Score: 289 bits (740), Expect = 2.690e-91
Identity = 148/284 (52.11%), Postives = 193/284 (67.96%), Query Frame = 1 
Query:    1 KQSVLRMLLGLVKDWSFKVAAQNGISREEVSPATLKTFGSYHLGVHTPEADIDVLCLAPRHCTRLAFFTSFCDMLDVHPEVEELFPVQEAYTPVIKFKAQGVNIDMLFCSLHYARLPSMCDVHIEEHLRFLDDAGVRSLNGVRVSELILTLVPNHGAFRTTLRAVKEWARRRGIYSNVLGCLGGVNWAILVAFVVQRYPNASPSVLMSKFFLMYHRWKWPNHVSLNELQSLKENSLAEGFPMHTVWNPVTNPRDKAHLMPIITPAYPAMNSSYNVGEPQMRLIR 852
            +++ L ++   V+ W+   A + G+  +  S   ++TFGSY LGVH+PEADID LCLAPRHC+RL FFTSF  +L    +V  +  + +AY PVIKF+  GV ID+LF +L  A +P   D+   + LR +D+ GVRSLNG RV+E+IL LVPN   FR TL AVK WAR RGIYSNVLG LGGVNWAILVA V Q YP +    L++KFF +YH+W WPN + LN +    +   AE   + + WNP   PRD+ HLMPIITPA+PAMNSSYNV +  +RL++
Sbjct:   49 RENALELVGAWVEQWAQNEATKRGLVVDATSLTQIRTFGSYRLGVHSPEADIDTLCLAPRHCSRLGFFTSFPLLLKHQAQVTSVHSIPDAYVPVIKFQVLGVAIDLLFVALDVASVPEDIDLLDPKTLRDVDEPGVRSLNGCRVAEMILQLVPNLDQFRLTLVAVKHWARMRGIYSNVLGFLGGVNWAILVARVCQLYPQSLAGTLLTKFFRVYHQWIWPNPILLNNIMD-DDGKHAELHHLQS-WNPKLYPRDRLHLMPIITPAFPAMNSSYNVLDCTLRLMQ 330
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig68262.14451.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQE0_ECTSI2.550e-17682.58Polynucleotide adenylyltransferase (Fragment) n=1 ... [more]
A0A6H5KWQ1_9PHAE3.640e-17483.62Polynucleotide adenylyltransferase (Fragment) n=1 ... [more]
A0A836C8Y5_9STRA5.130e-11660.28Poly(A) polymerase n=1 Tax=Tribonema minus TaxID=3... [more]
A0A067CCL2_SAPPC6.450e-9854.67Poly(A) polymerase n=2 Tax=Saprolegnia TaxID=4769 ... [more]
A0A1V9YEI6_9STRA3.960e-9553.63Poly(A) polymerase n=1 Tax=Achlya hypogyna TaxID=1... [more]
A0A8K1CNK2_PYTOL2.260e-9350.87Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4CC13_PYTIN6.070e-9353.50Polynucleotide adenylyltransferase (Fragment) n=1 ... [more]
A0A024TB13_9STRA8.030e-9352.11Poly(A) polymerase n=1 Tax=Aphanomyces invadans Ta... [more]
A0A6G0XG51_9STRA1.930e-9253.33Poly(A) polymerase n=1 Tax=Aphanomyces euteiches T... [more]
A0A024TBD6_9STRA2.690e-9152.11Poly(A) polymerase n=1 Tax=Aphanomyces invadans Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig68262contigH-elongata_contig68262:346..3047 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score504.2
Seed ortholog evalue3.9e-140
Seed eggNOG ortholog2880.D7FQE0
KEGG koko:K14376
KEGG Pathwayko03015,map03015
GOsGO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004652,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005847,GO:0005849,GO:0006139,GO:0006378,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0010468,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0017076,GO:0019219,GO:0019222,GO:0030145,GO:0030554,GO:0031123,GO:0031124,GO:0031323,GO:0031440,GO:0031974,GO:0031981,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0034641,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043631,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0050684,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0070013,GO:0070566,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363,GO:1903311
EggNOG free text desc.interspecies interaction between organisms
EggNOG OGsCOG5186@1,KOG2245@2759
EC2.7.7.19
COG Functional cat.A
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03019
Hectar predicted targeting categoryother localisation
Exons6
Model size855
Cds size837
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931075.8124402-CDS-H-elongata_contig68262:345..5041622931075.8124402-CDS-H-elongata_contig68262:345..504Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig68262 346..504 -
1691679687.8816345-CDS-H-elongata_contig68262:345..5041691679687.8816345-CDS-H-elongata_contig68262:345..504Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig68262 346..504 -
1622931075.8248804-CDS-H-elongata_contig68262:976..11531622931075.8248804-CDS-H-elongata_contig68262:976..1153Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig68262 977..1153 -
1691679687.8952754-CDS-H-elongata_contig68262:976..11531691679687.8952754-CDS-H-elongata_contig68262:976..1153Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig68262 977..1153 -
1622931075.8418248-CDS-H-elongata_contig68262:1337..14811622931075.8418248-CDS-H-elongata_contig68262:1337..1481Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig68262 1338..1481 -
1691679687.9096587-CDS-H-elongata_contig68262:1337..14811691679687.9096587-CDS-H-elongata_contig68262:1337..1481Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig68262 1338..1481 -
1622931075.861287-CDS-H-elongata_contig68262:1979..20751622931075.861287-CDS-H-elongata_contig68262:1979..2075Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig68262 1980..2075 -
1691679687.9279234-CDS-H-elongata_contig68262:1979..20751691679687.9279234-CDS-H-elongata_contig68262:1979..2075Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig68262 1980..2075 -
1622931075.8793242-CDS-H-elongata_contig68262:2378..25261622931075.8793242-CDS-H-elongata_contig68262:2378..2526Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig68262 2379..2526 -
1691679687.9417136-CDS-H-elongata_contig68262:2378..25261691679687.9417136-CDS-H-elongata_contig68262:2378..2526Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig68262 2379..2526 -
1622931075.895016-CDS-H-elongata_contig68262:2916..30291622931075.895016-CDS-H-elongata_contig68262:2916..3029Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig68262 2917..3029 -
1691679687.9519875-CDS-H-elongata_contig68262:2916..30291691679687.9519875-CDS-H-elongata_contig68262:2916..3029Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig68262 2917..3029 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931075.9100075-UTR-H-elongata_contig68262:3029..30471622931075.9100075-UTR-H-elongata_contig68262:3029..3047Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig68262 3030..3047 -
1691679687.9618356-UTR-H-elongata_contig68262:3029..30471691679687.9618356-UTR-H-elongata_contig68262:3029..3047Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig68262 3030..3047 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig68262.14451.1prot_H-elongata_contig68262.14451.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig68262 346..3029 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig68262.14451.1

>prot_H-elongata_contig68262.14451.1 ID=prot_H-elongata_contig68262.14451.1|Name=mRNA_H-elongata_contig68262.14451.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=279bp
MLLGLVKDWSFKVAAQNGISREEVSPATLKTFGSYHLGVHTPEADIDVLC
LAPRHCTRLAFFTSFCDMLDVHPEVEELFPVQEAYTPVIKFKAQGVNIDM
LFCSLHYARLPSMCDVHIEEHLRFLDDAGVRSLNGVRVSELILTLVPNHG
AFRTTLRAVKEWARRRGIYSNVLGCLGGVNWAILVAFVVQRYPNASPSVL
MSKFFLMYHRWKWPNHVSLNELQSLKENSLAEGFPMHTVWNPVTNPRDKA
HLMPIITPAYPAMNSSYNVGEPQMRLIRQ
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mRNA from alignment at H-elongata_contig68262:346..3047-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig68262.14451.1 ID=mRNA_H-elongata_contig68262.14451.1|Name=mRNA_H-elongata_contig68262.14451.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2702bp|location=Sequence derived from alignment at H-elongata_contig68262:346..3047- (Himanthalia elongata Himel1 dioecious)
AAACAGTCAGTCTTGAGGATGCTGTTAGGGCTGGTGAAGGACTGGAGCTT
CAAGGTCGCGGCGCAGAACGGCATCTCTCGGGAAGAAGTCTCCCCGGCCA
CCCTCAAGACCTTCGGCTCGTACCACCTCGGGTGAGAGGGATCGAGACAC
GGACAAATTGATACTGGTATATAATAGGGAGAGAGGAGGGAGTCGAGGTC
GACGGCGGAGGCAGACTATTGTCACTCTATACGGGAATATCTGCCGCTGC
ACTACCATGCCGTATGATGACAAAACCTCCCTTAAACTCTTGGAAAACTC
CCCCCTTCCCCTCCTCCGCTCCCGTGGAGGCGTGATCAACGATCTAACCA
AGGCATGTAAAAGTTGAGTATACCCCTCTCCCCCCACCCCCCCGGAAACA
TGCTAAGGAAGCTCAATTAGCTTATCCAGGCGGAAGATGTACAGTGGCAA
AAAGTACGTAGGCAAAAAAAAATGTTTCGCGGTTGCCACGTTTGTTGCTC
ATCGACGGCGACGTCTCCCAGGGTCCACACGCCGGAAGCGGATATTGACG
TGCTGTGCCTTGCGCCCCGTCACTGCACGAGGTTGGCATTCTTCACCTCT
TTCTGCGACATGCTTGACGTACATCCTGAGGTGGAGGAGTTGTTTCCCGT
ACAGGAGGCGTACACGCCGGTCAGTGGGATGCGGCTTGTGTGAGAGATGC
AAGCGAGGGATGGAAGAAAGCAGGAGAGGGGGCGGGGGGATAGTTGCCAG
AAGGTTCATATGTGTAACTCGACAAAAAAACGGTGCGCGACCCATCCGGA
GTAGGAAGTTGTGTAGTGTGGTGTGGTGTCTTCAAGCGAGGGTGACGTCT
ACACTGGGAGCTTGTCTGTTGACGGTGTCCGTTGGCAACAACAACCGTGT
CTAGTCTTAGGCTTGTCTTGTGCGACTTTTTATCGCAAGCATCCCTTGCC
CCGCCTCATGATTGTAACATAGGTGATTAAGTTCAAGGCGCAAGGAGTGA
ACATCGACATGCTGTTCTGCTCCCTTCATTACGCGCGCTTGCCCTCTATG
TGCGACGTCCACATCGAGGTAAGAGTTTTGTAGCAGCGTGTGCTCCGGCC
GTTTGTCGTCCCGTTTCGATGCTAGTCATTGGACATTGCGGTCGCCGTCC
TCCTTCCCTTATCCCCGGCGAACATCCGATAAAGCTTTTAAGCTATTTTT
AATACTTCGTGATCCAAGTGATAGGGGGCTCTTCTTCTGCAGGAAAAAAG
GCGACGCAACGCGAAACAGTTTAAGGTGTACCGTGCCCAATTTTACCAGA
CGGGGCTTGCCTCCGCGGTGCGGCACTTTCGGCGAAAACGCGGTTACGTG
ATCGATTGATCGATCTATCGGGATCGTCCCAACGCAACTGGCTGGGGTCG
AGGGGGGTAGGGGGAGTTATAAAGGAGCCCCCCCCCCCCTCCTCCACGAT
ATTTGTGTTCTATCATTTTGGATACCTCGCCGCCCCCGCGGCCTCCAAAT
CACTGAACGACCGAATCGCCCTAAACCTTCGAACGACGGGATGACGACGG
GACGATCACATACCAGGAACATCTGCGATTTCTGGACGATGCCGGAGTTC
GCAGTTTAAACGGCGTTCGGGTCTCGGAGCTTATTCTAACGCTAGTGCCG
AACCACGGCGCGTTCCGAACCACGTTGAGGGCGGTGAAGGAGTGGGCACG
ACGGCGGGGGGTGAGCTCTTCCTTTATTGCGGCATAATTATCTCTCCTAA
GTTTTGTTAATATGCCGCATGTTACCCAAGGGCACTGTTTTTGTGTTTTT
GATCGTAACTGCTTGTGAGTCTGCCGTTTTGTCTGAAGCTGATTGTTTCC
CGTTTGTGTGGTTATCTCTCTCGTCTTTCTTGGATGCCGGGAAGATCTAC
AGTAACGTCTTGGGGTGCCTCGGAGGCGTGAACTGGGCTATCCTCGTGGC
GTTCGTGGTGCAGAGGTACCCCAACGCCTCGCCCTCGGTGTTGATGAGCA
AGTTCTTCCTCATGTACCACCGCTGGAAGTGGCCCAACCATGTGTCGCTG
AACGAGCTGCAGAGCCTCAAGGTACTCGCGCTCGAGGCTTGACGTAAAGC
AAAAGAGCCAAGACGTCGTGCTCCTGTTGGCTGTAGCAGCAGCAGCGACG
AGATGCACGAGTATACACACTTGATATAATTTATTGTAGAAGCCCACTAC
TCTACATTCCATACTAATAATATATACTAGTGGAAGGTGAGGCAGGGTGG
TGGAGGGGTATGCATCAGTTACTGTTTCCGTGGCCGTCGCTGCCGGTTGT
CGTCTGTCGTTTGTCGGTCGGAAGAAAATATTCGCAAGGGAAAAGCGACC
TCGAGCAGCGACTGCGATTGTCACCATCACCGAGCTTGCGTCTGACAGTA
CCGTCTTGTACTATATCGTTGCGCTATAAGAGGTATGAAGGCGTTACAAC
GTGCGCGTTCCGTCGTTGCTCGCTCTCGCTGAAGCCTGAGTAAGGCGGCT
TTGCTTTGCTATGCTACACTGTTTGGCGCCGTACTGACCGCAGGAGAACA
GCTTAGCGGAGGGGTTTCCCATGCACACTGTCTGGAATCCGGTAACGAAC
CCTAGGGACAAGGCGCATCTCATGCCAATCATCACCCCGGCGTACCCCGC
CATGAACTCGAGCTACAACGTGGGAGAGCCTCAAATGCGCCTCATCAGAC
AG
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Coding sequence (CDS) from alignment at H-elongata_contig68262:346..3047-

>mRNA_H-elongata_contig68262.14451.1 ID=mRNA_H-elongata_contig68262.14451.1|Name=mRNA_H-elongata_contig68262.14451.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1674bp|location=Sequence derived from alignment at H-elongata_contig68262:346..3047- (Himanthalia elongata Himel1 dioecious)
ATGCTGTTAGGGCTGGTGAAGGACTGGAGCTTCAAGGTCGCGGCGCAGAA
CGGCATCTCTCGGGAAGAAGTCTCCCCGGCCACCCTCAAGACCTTCGGCT
CGTACCACCTCGGATGCTGTTAGGGCTGGTGAAGGACTGGAGCTTCAAGG
TCGCGGCGCAGAACGGCATCTCTCGGGAAGAAGTCTCCCCGGCCACCCTC
AAGACCTTCGGCTCGTACCACCTCGGGGTCCACACGCCGGAAGCGGATAT
TGACGTGCTGTGCCTTGCGCCCCGTCACTGCACGAGGTTGGCATTCTTCA
CCTCTTTCTGCGACATGCTTGACGTACATCCTGAGGTGGAGGAGTTGTTT
CCCGTACAGGAGGCGTACACGCCGGGTCCACACGCCGGAAGCGGATATTG
ACGTGCTGTGCCTTGCGCCCCGTCACTGCACGAGGTTGGCATTCTTCACC
TCTTTCTGCGACATGCTTGACGTACATCCTGAGGTGGAGGAGTTGTTTCC
CGTACAGGAGGCGTACACGCCGGTGATTAAGTTCAAGGCGCAAGGAGTGA
ACATCGACATGCTGTTCTGCTCCCTTCATTACGCGCGCTTGCCCTCTATG
TGCGACGTCCACATCGAGGTGATTAAGTTCAAGGCGCAAGGAGTGAACAT
CGACATGCTGTTCTGCTCCCTTCATTACGCGCGCTTGCCCTCTATGTGCG
ACGTCCACATCGAGGAACATCTGCGATTTCTGGACGATGCCGGAGTTCGC
AGTTTAAACGGCGTTCGGGTCTCGGAGCTTATTCTAACGCTAGTGCCGAA
CCACGGCGCGTTCCGAACCACGTTGAGGGCGGTGAAGGAGTGGGCACGAC
GGCGGGGGGAACATCTGCGATTTCTGGACGATGCCGGAGTTCGCAGTTTA
AACGGCGTTCGGGTCTCGGAGCTTATTCTAACGCTAGTGCCGAACCACGG
CGCGTTCCGAACCACGTTGAGGGCGGTGAAGGAGTGGGCACGACGGCGGG
GGATCTACAGTAACGTCTTGGGGTGCCTCGGAGGCGTGAACTGGGCTATC
CTCGTGGCGTTCGTGGTGCAGAGGTACCCCAACGCCTCGCCCTCGGTGTT
GATGAGCAAGTTCTTCCTCATGTACCACCGCTGGAAGTGGCCCAACCATG
TGTCGCTGAACGAGCTGCAGAGCCTCAAGATCTACAGTAACGTCTTGGGG
TGCCTCGGAGGCGTGAACTGGGCTATCCTCGTGGCGTTCGTGGTGCAGAG
GTACCCCAACGCCTCGCCCTCGGTGTTGATGAGCAAGTTCTTCCTCATGT
ACCACCGCTGGAAGTGGCCCAACCATGTGTCGCTGAACGAGCTGCAGAGC
CTCAAGGAGAACAGCTTAGCGGAGGGGTTTCCCATGCACACTGTCTGGAA
TCCGGTAACGAACCCTAGGGACAAGGCGCATCTCATGCCAATCATCACCC
CGGCGTACCCCGCCATGAACTCGAGCTACAACGTGGGAGAGCCTCAAATG
CGCCTCATCAGACAGGAGAACAGCTTAGCGGAGGGGTTTCCCATGCACAC
TGTCTGGAATCCGGTAACGAACCCTAGGGACAAGGCGCATCTCATGCCAA
TCATCACCCCGGCGTACCCCGCCATGAACTCGAGCTACAACGTGGGAGAG
CCTCAAATGCGCCTCATCAGACAG
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