mRNA_H-elongata_contig68244.14449.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig68244.14449.1
Unique NamemRNA_H-elongata_contig68244.14449.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig68244.14449.1 vs. uniprot
Match: A0A6H5J663_9PHAE (2-Hacid_dh_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J663_9PHAE)

HSP 1 Score: 462 bits (1188), Expect = 1.880e-161
Identity = 232/306 (75.82%), Postives = 268/306 (87.58%), Query Frame = 1
Query:    1 RLGPPAG-EAKIVVIAEKGDDSLVELERLPK--KATLLFHGLNMEDFSTPDGKRALAEANVFFVCEGNKDLLSQLLPLAPKLAWISSRSAGVDSLLFPELVENDGILLTNARGLFSSSLAEYCLLSCLYFAKDVDRWKRNQRERKWEKYTVTEILGSTLGVIGYGDIGQACARKAKAMGMKIIAQRRRPELSRGDGVADEVLGDGQVGDVIAKSDYVVVAAALTPESKGMVGAAELARAKPHTVIISIGRGPLIDEEAMTLALRDGRLRGAALDVFCVEPLPEDSPLWAMENVLLSSHNADLTATF 909
            RLGP AG +AK++V+A++GD +LVELERLP    A++LF G  +EDFSTP+ ++ALAEANV   C G KDLLS+L PLAPKLAWI SRSAGVDS LFPEL+E+D + LTNARGLFSSSLAE+ +LSCLYFAKDVDRWKRNQR+RKW+++ V+E+ G+TLGV+GYGDIGQA A KAKAMGMKIIAQRRRPELSRGDGVADEVLG GQVG+VIAKSDY++VAAALTPE+ GMVGAAELA A+PH VII+IGRGPLIDEEAMT  LRDGRLRGA+LDVFC EPLP +S LW +ENVLLS HNADLTA F
Sbjct:    6 RLGPAAGGQAKVIVVAKEGDPTLVELERLPNDGSASVLFRGATVEDFSTPEAQQALAEANVLLNCGGKKDLLSRLFPLAPKLAWIHSRSAGVDSALFPELIESDRVSLTNARGLFSSSLAEHAVLSCLYFAKDVDRWKRNQRDRKWDQFCVSEVFGTTLGVVGYGDIGQAAAVKAKAMGMKIIAQRRRPELSRGDGVADEVLGAGQVGEVIAKSDYILVAAALTPETTGMVGAAELAMARPHAVIINIGRGPLIDEEAMTQMLRDGRLRGASLDVFCKEPLPAESDLWGLENVLLSPHNADLTAHF 311          
BLAST of mRNA_H-elongata_contig68244.14449.1 vs. uniprot
Match: A0A6H5KFZ0_9PHAE (2-Hacid_dh_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KFZ0_9PHAE)

HSP 1 Score: 436 bits (1121), Expect = 2.820e-151
Identity = 221/304 (72.70%), Postives = 254/304 (83.55%), Query Frame = 1
Query:    1 RLGPPAGEAKIVVIAEKGDDSLVELERLPKKAT-LLFHGLNMEDFSTPDGKRALAEANVFFVCEGNKDLLSQLLPLAPKLAWISSRSAGVDSLLFPELVENDGILLTNARGLFSSSLAEYCLLSCLYFAKDVDRWKRNQRERKWEKYTVTEILGSTLGVIGYGDIGQACARKAKAMGMKIIAQRRRPELSRGDGVADEVLGDGQVGDVIAKSDYVVVAAALTPESKGMVGAAELARAKPHTVIISIGRGPLIDEEAMTLALRDGRLRGAALDVFCVEPLPEDSPLWAMENVLLSSHNADLTATF 909
            RLG  AG+A I+V+AE  D +LVELERLPK ++ +LF G  +E+FSTP+GKRALAEANV   C G KDLLSQL PLAPKLAW+ SR  GVD+ LFP LVE D + LTNARGLF+S+LAE+ +LSCLYFAKDVDRWKRNQ+ RKWE+Y V E+  +TLG+IGYGDIG+A A KAKAMGMKIIAQRRRPELS GDG+AD+V G GQVGDVIA+SDY++VAAALTP + GMVGA EL+RAKPH VIISIGRGPLIDE AMT  L+DGRLRGAALDVF  EPLP DSPLW +ENVLLS HNADL A +
Sbjct:    7 RLGSAAGQASIIVVAEADDPTLVELERLPKDSSEVLFRGSTIEEFSTPEGKRALAEANVLLNCIGTKDLLSQLFPLAPKLAWVHSRLVGVDAALFPALVEADHVSLTNARGLFASALAEHVVLSCLYFAKDVDRWKRNQKCRKWERYHVAEVSRTTLGIIGYGDIGRAAAVKAKAMGMKIIAQRRRPELSIGDGIADQVFGAGQVGDVIAQSDYILVAAALTPATMGMVGAEELSRAKPHAVIISIGRGPLIDEVAMTQMLQDGRLRGAALDVFTTEPLPTDSPLWGLENVLLSPHNADLAAHY 310          
BLAST of mRNA_H-elongata_contig68244.14449.1 vs. uniprot
Match: A0A835Z904_9STRA (D-isomer specific 2-hydroxyacid dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z904_9STRA)

HSP 1 Score: 355 bits (912), Expect = 1.100e-119
Identity = 185/294 (62.93%), Postives = 219/294 (74.49%), Query Frame = 1
Query:   28 KIVVIAEKGDDSLVELERLPKKATLLFHGLNMEDFSTPDGKRALAEANVFFVCEGNKDLLSQLLPLAPKLAWISSRSAGVDSLLFPELVENDGILLTNARGLFSSSLAEYCLLSCLYFAKDVDRWKRNQRERKWEKYTVTEILGSTLGVIGYGDIGQACARKAKAMGMKIIAQRRRPELSRGDGVADEVLGDGQVGDVIAKSDYVVVAAALTPESKGMVGAAELARAKPHTVIISIGRGPLIDEEAMTLALRDGRLRGAALDVFCVEPLPEDSPLWAMENVLLSSHNADLTATF 909
            KI ++A K DD+L EL+ LP  A ++  G   EDF+    K ALA   V   C G + L+S L P  P L W+ SR AGVD +LFPELV +  + LTNARGLFSS+LAEY  L+CLYFAKDVDRWK  QR+R WEK+ V EI G TLGV+GYGDIGQ+ AR AKA+GM++IAQRR       DGVADE  G   VGDV+A+SDYV VAAALTPE++GM+GAA LARA+PHTVII++GRGPLIDE A+  ALR+GR+RGAALDVF  EPLP DS LW M NVLLS HNAD+TATF
Sbjct:    8 KIAIVANKDDDTLTELKHLPDGAEVVIVGATEEDFAGDAAKDALASCTVLLNCIGGRALISSLWPHMPNLKWMHSRFAGVDHVLFPELVASR-VPLTNARGLFSSALAEYVALACLYFAKDVDRWKAQQRDRVWEKFVVQEIRGQTLGVLGYGDIGQSAARLAKALGMRVIAQRRNAAAPP-DGVADETFGPDGVGDVVARSDYVCVAAALTPETRGMLGAAALARARPHTVIINVGRGPLIDEAALAEALREGRVRGAALDVFETEPLPRDSALWGMGNVLLSPHNADMTATF 299          
BLAST of mRNA_H-elongata_contig68244.14449.1 vs. uniprot
Match: I2CQU9_NANGC (D-isomer specific 2-hydroxyacid dehydrogenase n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQU9_NANGC)

HSP 1 Score: 291 bits (745), Expect = 2.720e-93
Identity = 151/297 (50.84%), Postives = 207/297 (69.70%), Query Frame = 1
Query:   22 EAKIVVIAEKGDDSLVELERLPKKATLLFHGLNMEDFSTPDGKRALAEANVFFVCE-GNKDLLSQLLPLAPKLAWISSRSAGVDSLLFPELVENDGILLTNARGLFSSSLAEYCLLSCLYFAKDVDRWKRNQRERKWEKYTVTEILGSTLGVIGYGDIGQACARKAKAMGMKIIAQRRRPELSRGDGVADEVLGDGQVGDVIAKSDYVVVAAALTPESKGMVGAAELARAKPHTVIISIGRGPLIDEEAMTLALRDGRLRGAALDVFCVEPLPEDSPLWAMENVLLSSHNADLTATF 909
            E +I ++       + EL+ LP +A ++  G +++DF + D    L   +V  +     ++LLS L P    L WI    AGVD +LFP+L+ +  I LTNARGLFSSSLAEY +L+  YFAKD+ R    + E+KWE+Y V E+ G+TLG++GYGDIGQAC R AKA GM+++A +RRPEL   DG+AD VLG  ++ ++IA+SDY++VAAALTP+++G++ A ELA AKP  VII++GRGPL+ EE +  ALR+GR++GAA+DVF  EPLP D P W M  VLLS HN D+TATF
Sbjct:   86 ECRIAILGPHDTPHMEELKHLPPEAKVVAQGNSLQDFQSLDPS-LLGSVDVLLLAPPAGRELLSSLWPSFTNLKWIHCIFAGVDHVLFPDLIHSS-IPLTNARGLFSSSLAEYGVLAMSYFAKDLPRLLAQKAEKKWERYCVEELRGATLGIVGYGDIGQACGRLAKAFGMRVVALKRRPELGGKDGIADAVLGREKIDELIAQSDYLIVAAALTPDTRGIISAKELASAKPSLVIINMGRGPLLVEEDVIEALREGRVKGAAMDVFDTEPLPADHPYWEMPQVLLSPHNMDMTATF 380          
BLAST of mRNA_H-elongata_contig68244.14449.1 vs. uniprot
Match: A0A7X2TRU1_9BACT (D-2-hydroxyacid dehydrogenase n=1 Tax=Bryobacterales bacterium TaxID=2026791 RepID=A0A7X2TRU1_9BACT)

HSP 1 Score: 268 bits (686), Expect = 1.480e-85
Identity = 140/293 (47.78%), Postives = 199/293 (67.92%), Query Frame = 1
Query:   31 IVVIAEKGDDSLVELERLPKKATLLFHGLNMEDFSTPDGKRALAEANVFFVCEGNKDLLSQLLPLAPKLAWISSRSAGVDSLLFPELVENDGILLTNARGLFSSSLAEYCLLSCLYFAKDVDRWKRNQRERKWEKYTVTEILGSTLGVIGYGDIGQACARKAKAMGMKIIAQRRRPELSRGDGVADEVLGDGQVGDVIAKSDYVVVAAALTPESKGMVGAAELARAKPHTVIISIGRGPLIDEEAMTLALRDGRLRGAALDVFCVEPLPEDSPLWAMENVLLSSHNADLTATF 909
            ++V+A   +  L  LE+LP+  T+   G ++E F     +R    A+   V  G + LL QL P+AP+  W+ SR+AG+D +LFPEL+E+  + LTN  G+FS SL E+   + LYFAKD  R  RNQ   +WE++ V E+ G T+G++GYGDIG+A A + KA+GM++IA RRRPE S+GDG+ DEV G  ++ D++++SDYVV AA LTPE+KG++G   +A  K   V++++GRGP+IDE A+  AL + R+RGAALDVF  EPLPE    + +ENVLLS H AD T T+
Sbjct:    8 LLVLAHPAESQLKMLEQLPEGTTIAV-GESIEAF-----ERVAPAADAILVWSGTRALLQQLWPIAPRARWVHSRAAGLDGVLFPELIESP-VPLTNGSGVFSRSLGEFVAAAALYFAKDFRRMIRNQAAGRWEQFDVEEVYGKTMGIVGYGDIGRAAAERGKALGMRVIALRRRPEKSQGDGLIDEVFGPDRLLDLMSESDYVVAAAPLTPETKGLIGVEAIASMKSTGVLMNVGRGPVIDEAALIAALIEKRIRGAALDVFEKEPLPEGHAYFGLENVLLSPHCADHTPTW 293          
BLAST of mRNA_H-elongata_contig68244.14449.1 vs. uniprot
Match: A0A2K3CU69_CHLRE (2-Hacid_dh_C domain-containing protein n=3 Tax=Chlamydomonas TaxID=3052 RepID=A0A2K3CU69_CHLRE)

HSP 1 Score: 268 bits (684), Expect = 1.940e-84
Identity = 145/309 (46.93%), Postives = 197/309 (63.75%), Query Frame = 1
Query:    7 GPPAGEAKIVVIAEKGDDSLVELERLPKKATLLFHGLNMEDFSTPDGKRALAEANVFFVC-----EGNKDLLSQLLPLAPKLAWISSRSAGVDSLLFPELVENDGILLTNARGLFSSSLAEYCLLSCLYFAKDVDRWKRNQRERKWEKYTVTEILGSTLGVIGYGDIGQACARKAKAMGMKIIAQRRRPELSRGD---GVADEVLGDGQVGDVIAKSDYVVVAAALTPESKGMVGAAELARAKPHTVIISIGRGPLIDEEAMTLALRDGRLRGAALDVFCVEPLPEDSPLWAMENVLLSSHNADLTATF 909
            G P     ++V++      L  L+RLP    ++  G   EDF+    ++  A  +V   C      G +D +  L P    L W+ S SAG++ LLFPELVE   + LTNA+G++S SLAEYCL +C +FAKD+ R +R Q   KWE Y V E+ G TLGVIGYGDIGQACAR AKA  M+++A RRR ELS  +   G+ + +    Q+ +++A SDYVV+A   TP +  MVGAA +A  +PH+V I++GRG  +DE+A+  AL++GR+RGAALDVF  EPLP DSPLW ++NVL+S H AD T  F
Sbjct:   48 GAPRSSVNLLVVSGPDSPELSVLQRLPAGVQVVATGQTPEDFAHLSAEQC-ASVDVLLNCGVGKNAGKRDDIRALWPRLTNLNWMHSASAGLEHLLFPELVEGP-VTLTNAKGVYSHSLAEYCLTACNWFAKDLPRLRRQQAAGKWEPYDVEELRGKTLGVIGYGDIGQACARLAKAFRMRVVALRRRTELSAEEQAAGIVERMYSPDQLQELMAASDYVVMATPHTPATDKMVGAAAIAAMRPHSVFINLGRGKCVDEKALIAALQEGRIRGAALDVFETEPLPADSPLWGLDNVLMSPHCADRTKEF 354          
BLAST of mRNA_H-elongata_contig68244.14449.1 vs. uniprot
Match: A0A482RWC2_9ARCH (D-2-hydroxyacid dehydrogenase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RWC2_9ARCH)

HSP 1 Score: 259 bits (662), Expect = 1.010e-82
Identity = 128/233 (54.94%), Postives = 167/233 (71.67%), Query Frame = 1
Query:  205 LSQLLPLAPKLAWISSRSAGVDSLLFPELVENDGILLTNARGLFSSSLAEYCLLSCLYFAKDVDRWKRNQRERKWEKYTVTEILGSTLGVIGYGDIGQACARKAKAMGMKIIAQRRRPELSRGDGVADEVLGDGQVGDVIAKSDYVVVAAALTPESKGMVGAAELARAKPHTVIISIGRGPLIDEEAMTLALRDGRLRGAALDVFCVEPLPEDSPLWAMENVLLSSHNADLTA 903
            +S+++   P L W+ S +AGVD LL PELV ND I LTNARG+F+ SLAEY +L+C YFAKD+ R KR Q    W+K+ VT++ G T+G++GYG+IG  CAR AKA GMK++A RR PE S  D + D + G  Q+  ++ +SD++V+  ALT E+KG V A  L+ AK   V+I+IGRG L+DE A+   LRDG L GAALDVFC EPLP DSPLW + NVL+S HNADLT+
Sbjct:    1 MSEIINEMPFLVWVHSITAGVDHLLCPELVNNDEITLTNARGVFAGSLAEYVMLACSYFAKDIPRMKRQQASSVWDKFMVTDLRGKTMGIVGYGNIGLHCARLAKAYGMKVLALRRNPEQSVHDKLVDTLYGPSQLDVLMKESDFLVICMALTSETKGYVDAQHLSMAKKGQVLINIGRGALVDEAALVQVLRDGPLAGAALDVFCTEPLPADSPLWQLPNVLVSPHNADLTS 233          
BLAST of mRNA_H-elongata_contig68244.14449.1 vs. uniprot
Match: A0A7S4J2Y9_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J2Y9_9STRA)

HSP 1 Score: 263 bits (673), Expect = 1.080e-82
Identity = 143/304 (47.04%), Postives = 199/304 (65.46%), Query Frame = 1
Query:    7 GPPAGEAKIVVIAEKGDDSLVELER--LPKKATLLFHGLNMEDFSTPDGKRALAEANVFFVCE-GNKDLLSQLLPLAPKLAWISSRSAGVDSLLFPELVENDGILLTNARGLFSSSLAEYCLLSCLYFAKDVDRWKRNQRERKWEKYTVTEILGSTLGVIGYGDIGQACARKAKAMGMKIIAQRRRPELSRGDGVADEVLGDGQVGDVIAKSDYVVVAAALTPESKGMVGAAELARAKPHTVIISIGRGPLIDEEAMTLALRDGRLRGAALDVFCVEPLPEDSPLWAMENVLLSSHNADLTATF 909
            GP   +AKI+ +++  D +   L    LP  A LL  G  +EDF   D   A  E NV  V   G +  L QLL   P + W+ SRSAG+D +    L   + ++LTNA+G+FSS+LAEY +++C YFAKD+ R  R ++ + W KY V E+ G+T+GVIGYGDIG+A A+ AKA GM+++A RR P+ S  D   DEV G   +  ++++SDY++VAA LT E++GM+ A  L+ AK   V+I++GRGP IDE A+  +L+ G L+G A+DV  +EPLP+DSPLW +ENVLLS HN D TATF
Sbjct:   59 GPVTKKAKILSLSDPNDKTNSALYNGDLPDGARLLAIGTCLEDFDV-DALHA-EEPNVILVSHLGARQALIQLLDAFPTVDWVHSRSAGIDFITSEGLAAKEDVILTNAKGIFSSTLAEYTMMACSYFAKDLPRLMRQKQSKDWNKYNVLELRGATMGVIGYGDIGRAAAKLAKAYGMRVLALRRNPKKSTFDPYCDEVYGMEGLNKLMSESDYILVAAPLTDETRGMISADALSHAKNDAVLINVGRGPTIDELALIESLKTGGLKGCAMDVTTIEPLPKDSPLWELENVLLSPHNMDQTATF 360          
BLAST of mRNA_H-elongata_contig68244.14449.1 vs. uniprot
Match: A0A150GGU6_GONPE (2-Hacid_dh_C domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GGU6_GONPE)

HSP 1 Score: 260 bits (664), Expect = 6.150e-82
Identity = 145/310 (46.77%), Postives = 195/310 (62.90%), Query Frame = 1
Query:   10 PP--AGEAKIVVIAEKGDDSLVELERLPKKATLLFHGLNMEDFSTPDGKRALAEANVFFVC-----EGNKDLLSQLLPLAPKLAWISSRSAGVDSLLFPELVENDGILLTNARGLFSSSLAEYCLLSCLYFAKDVDRWKRNQRERKWEKYTVTEILGSTLGVIGYGDIGQACARKAKAMGMKIIAQRRRPELSRGD---GVADEVLGDGQVGDVIAKSDYVVVAAALTPESKGMVGAAELARAKPHTVIISIGRGPLIDEEAMTLALRDGRLRGAALDVFCVEPLPEDSPLWAMENVLLSSHNADLTATF 909
            PP   G A +++++      L  L+RLP   T++  G   EDF+    ++     NV   C      G +D +  L P  P L W+ S SAG++ LLFPELVE   ++LTNA+G++S SLAEYCL +C +FAKD+ R +R Q   +WE Y V E+ G TLG+IGYGDIGQAC R AKA  M+++A RRR ELS  +   GV +++    Q+  ++A SDYVV+A   TP +  MV AA +A  +PH V I++GRG  +DE A+  AL+ GR+RGAALDVF  EPL  DSPLW ++NVLLS H AD T  F
Sbjct:    8 PPQSGGHANLLIVSGPDSPELSVLQRLPAGVTVVATGRTPEDFAHLSPQQ-WESVNVLLNCGVGKNAGKRDDIRALWPRLPNLVWMHSASAGLEHLLFPELVEGP-VVLTNAKGVYSHSLAEYCLTACNWFAKDLPRLRRQQAAAQWEPYDVEELRGKTLGIIGYGDIGQACGRIAKAFRMRVVALRRRTELSEEEKAAGVVEKIFPPDQLHALMADSDYVVMATPHTPATHRMVDAAAIAAMRPHGVFINLGRGKCVDEAALIEALQAGRIRGAALDVFDTEPLTADSPLWQLDNVLLSPHCADRTKEF 315          
BLAST of mRNA_H-elongata_contig68244.14449.1 vs. uniprot
Match: A0A4P5U6A0_9BURK (2-hydroxyacid dehydrogenase n=1 Tax=Comamonadaceae bacterium TaxID=1871071 RepID=A0A4P5U6A0_9BURK)

HSP 1 Score: 256 bits (653), Expect = 1.420e-80
Identity = 131/293 (44.71%), Postives = 200/293 (68.26%), Query Frame = 1
Query:   31 IVVIAEKGDDSLVELERLPKKATLLFHGLNMEDFSTPDGKRALAEANVFFVCEGNKDLLSQLLPLAPKLAWISSRSAGVDSLLFPELVENDGILLTNARGLFSSSLAEYCLLSCLYFAKDVDRWKRNQRERKWEKYTVTEILGSTLGVIGYGDIGQACARKAKAMGMKIIAQRRRPELSRGDGVADEVLGDGQVGDVIAKSDYVVVAAALTPESKGMVGAAELARAKPHTVIISIGRGPLIDEEAMTLALRDGRLRGAALDVFCVEPLPEDSPLWAMENVLLSSHNADLTATF 909
            ++V+A+  +  L  L+ L +  T +  G + E F     ++A   A+   V   ++ L+ Q+  +APKL W+ +R+AG+D+LLFP LV++  + LTN+ G++S SL E+   + L+FAKD  R  RNQ   +WE++ V E+ G T+G++GYGDIG+A A +AK +GM++IA RR+P+ SR D + DEV+G   + +++ +SDYVVVAA LTP+++G+VGAA +   KP  V+I++GRGP++DE  +  ALR   +RGAALDVF  EPLP+D P +AM+N+LLS H AD T T+
Sbjct:    8 LLVLADPAEPQLKMLDSL-RDTTNIIVGQSPELF-----EQAAPVADAMLVWSASRSLVQQVFAMAPKLRWVHTRAAGLDTLLFPALVDSP-VPLTNSSGVYSRSLGEFVAAAMLFFAKDFRRMLRNQAAGRWEQFDVEELHGRTMGIVGYGDIGRAAAAQAKGLGMQVIALRRQPDKSRADSLVDEVMGQSDILELMRRSDYVVVAAPLTPDTRGLVGAAAIGAMKPSGVLINVGRGPVVDEAGLLSALRSKSIRGAALDVFDQEPLPQDHPFYAMDNLLLSPHCADHTQTW 293          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig68244.14449.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J663_9PHAE1.880e-16175.822-Hacid_dh_C domain-containing protein n=2 Tax=Ect... [more]
A0A6H5KFZ0_9PHAE2.820e-15172.702-Hacid_dh_C domain-containing protein n=2 Tax=Ect... [more]
A0A835Z904_9STRA1.100e-11962.93D-isomer specific 2-hydroxyacid dehydrogenase n=1 ... [more]
I2CQU9_NANGC2.720e-9350.84D-isomer specific 2-hydroxyacid dehydrogenase n=1 ... [more]
A0A7X2TRU1_9BACT1.480e-8547.78D-2-hydroxyacid dehydrogenase n=1 Tax=Bryobacteral... [more]
A0A2K3CU69_CHLRE1.940e-8446.932-Hacid_dh_C domain-containing protein n=3 Tax=Chl... [more]
A0A482RWC2_9ARCH1.010e-8254.94D-2-hydroxyacid dehydrogenase n=1 Tax=archaeon Tax... [more]
A0A7S4J2Y9_9STRA1.080e-8247.04Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A150GGU6_GONPE6.150e-8246.772-Hacid_dh_C domain-containing protein n=1 Tax=Gon... [more]
A0A4P5U6A0_9BURK1.420e-8044.712-hydroxyacid dehydrogenase n=1 Tax=Comamonadaceae... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig68244contigH-elongata_contig68244:196..3297 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score450.7
Seed ortholog evalue5.5e-124
Seed eggNOG ortholog2880.D8LGJ7
EggNOG free text desc.hydroxypyruvate reductase activity
EggNOG OGsCOG1052@1,KOG0069@2759
COG Functional cat.CH
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons6
Model size909
Cds size909
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig68244.14449.1prot_H-elongata_contig68244.14449.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig68244 196..3297 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931075.5566397-CDS-H-elongata_contig68244:195..3851622931075.5566397-CDS-H-elongata_contig68244:195..385Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig68244 196..385 +
1691679687.7630033-CDS-H-elongata_contig68244:195..3851691679687.7630033-CDS-H-elongata_contig68244:195..385Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig68244 196..385 +
1622931075.5760288-CDS-H-elongata_contig68244:975..12351622931075.5760288-CDS-H-elongata_contig68244:975..1235Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig68244 976..1235 +
1691679687.7734432-CDS-H-elongata_contig68244:975..12351691679687.7734432-CDS-H-elongata_contig68244:975..1235Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig68244 976..1235 +
1622931075.5928798-CDS-H-elongata_contig68244:1559..17181622931075.5928798-CDS-H-elongata_contig68244:1559..1718Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig68244 1560..1718 +
1691679687.783004-CDS-H-elongata_contig68244:1559..17181691679687.783004-CDS-H-elongata_contig68244:1559..1718Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig68244 1560..1718 +
1622931075.6079495-CDS-H-elongata_contig68244:2078..21741622931075.6079495-CDS-H-elongata_contig68244:2078..2174Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig68244 2079..2174 +
1691679687.7952118-CDS-H-elongata_contig68244:2078..21741691679687.7952118-CDS-H-elongata_contig68244:2078..2174Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig68244 2079..2174 +
1622931075.6238372-CDS-H-elongata_contig68244:2667..27591622931075.6238372-CDS-H-elongata_contig68244:2667..2759Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig68244 2668..2759 +
1691679687.8066142-CDS-H-elongata_contig68244:2667..27591691679687.8066142-CDS-H-elongata_contig68244:2667..2759Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig68244 2668..2759 +
1622931075.639088-CDS-H-elongata_contig68244:3185..32971622931075.639088-CDS-H-elongata_contig68244:3185..3297Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig68244 3186..3297 +
1691679687.8153973-CDS-H-elongata_contig68244:3185..32971691679687.8153973-CDS-H-elongata_contig68244:3185..3297Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig68244 3186..3297 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig68244.14449.1

>prot_H-elongata_contig68244.14449.1 ID=prot_H-elongata_contig68244.14449.1|Name=mRNA_H-elongata_contig68244.14449.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=303bp
RLGPPAGEAKIVVIAEKGDDSLVELERLPKKATLLFHGLNMEDFSTPDGK
RALAEANVFFVCEGNKDLLSQLLPLAPKLAWISSRSAGVDSLLFPELVEN
DGILLTNARGLFSSSLAEYCLLSCLYFAKDVDRWKRNQRERKWEKYTVTE
ILGSTLGVIGYGDIGQACARKAKAMGMKIIAQRRRPELSRGDGVADEVLG
DGQVGDVIAKSDYVVVAAALTPESKGMVGAAELARAKPHTVIISIGRGPL
IDEEAMTLALRDGRLRGAALDVFCVEPLPEDSPLWAMENVLLSSHNADLT
ATF
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mRNA from alignment at H-elongata_contig68244:196..3297+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig68244.14449.1 ID=mRNA_H-elongata_contig68244.14449.1|Name=mRNA_H-elongata_contig68244.14449.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3102bp|location=Sequence derived from alignment at H-elongata_contig68244:196..3297+ (Himanthalia elongata Himel1 dioecious)
AGGCTCGGCCCTCCGGCAGGCGAAGCGAAGATCGTTGTCATTGCTGAGAA GGGAGACGACTCGCTGGTGGAGCTCGAGCGATTGCCTAAGAAAGCAACGC TTCTGTTTCATGGGCTTAACATGGAAGATTTCTCCACCCCCGACGGGAAG CGGGCCCTCGCCGAAGCCAACGTCTTCTTTGTCTGTGAGGGTGAGAATAG CTTGAATGGGAATGATAACCGTAACCGTAACGGTAAATGTAATATATTGT AGGGTGATAGTAATGGTGATGTTGATGCGTGATCAGCGACGACGACCAAG GGGGACCGGGTTGGTCTTTCCGCTGGCCGTGTCTAGGGTTGAACATCGGC GTCAGGGTCGAGGGAGCCAGCCAGTCGTGTGTTGGTTAGGAGAAAGTTCT GGTAGGTCGTACAAGTGTTGTTTCTAATTCCATGGAAGGACGAAGAGACT TCGTAGACAGGAAGAGGGTGTTTGTTCCAACATCAACGGGGCGTTCTTCT TCGCTTGAACACATCTAGAGTCCGAGAGGCGATCAAAGACCCTACATACA CTCTACACTGTACACAATTTGATGGGGGGGGACAGGGGACAGGTGGAACT GACGTTGTATCGTGTCGTATCGAATCAGCGTTGCTTCTGCCGCATGATCT TGATGGCGTTAGGAAAGAACAGCAAGGGGAAATGGTGGAACAAAACCATC CGTTGTTACACCCCACCACCCCGCCACCGCTGCTGCTGCTGCTGGTGCCC TCGTGTATTCTCAACCGTTCTTTTTTTAAGGCAACAAGGACCTGTTGAGC CAGCTCCTTCCCCTGGCGCCCAAGCTTGCTTGGATTTCCAGTCGCAGCGC CGGCGTGGATAGCCTTCTCTTCCCGGAGTTGGTGGAGAACGACGGCATCC TCCTGACCAACGCGCGAGGACTGTTCAGCTCCTCGCTGGCGGAGTACTGC CTTCTGTCCTGCCTTTATTTCGCCAAGGACGTGGACCGCTGGAAGCGCAA CCAGCGCGAGAGGAAGTGGGAAAAATATACCGTGACCGAGGTGAAATATA AATGAGGCCAGGCTAAGCCAGACGAGACACTACTTCGCCGCTCGGGCGCC GCGCGTCCGTCCGAGCGATTCGGGTCTGTAGCGCAGCGGCGCCATCTTTT CCTTTCTTGGAGATGCCGTCCTTTTGGGAATGCGGCGCGCGGGTTTTTTT CCTAGCGCTGAAGGGGTATGGTACGATATGATATGGTATAAAATTGTAGG ATATGGGAAGACATGGCATGGCACAGCGGTTAATTCTCGAGGCGCGAGGT AAAAGCCACCCCCTTTTCTTGGTCGCTTGACGTGGTGACGCTTTCTCCGC GGACCCGACGCAAGATCTTGGGGTCAACGCTGGGAGTAATCGGGTACGGA GACATTGGCCAAGCGTGCGCGCGCAAGGCGAAGGCGATGGGCATGAAGAT CATCGCTCAGCGGCGGCGCCCGGAGCTCTCTCGGGGAGACGGGGTAGCCG ACGAAGTGCTGGGAGATGGCCAGGTTAGGCAGACGGCGGAACTTTGTGTT TTTTTGTTTTCTTTTTTTGGGAGGGGGGAGGGGTTTGATGATGTCTTGTT TTGTTTTATTTTCTCGAATGGTCGTCGTTGTCGTTCCTTGGGCATTGTGC TGATCACACAAAGCTTTTTCTTGCGCGCGATTTTTTATTACAGTATTGTT TTTTCCCTAGATTGTTTATTTTGTTGTTGATTGGGTTGATGTTTTGCATG TCGTCTTAATCCTTAATCAATGACGTCACTCACGTTTATCGCGAAAGAAA AATAACAGTTGACGAGGTGTTACTCATAACAGTGGGAGACGCCGGTGCTC TCTGCCCCCCCTCCCTCCTGCACCGCCTGCCAGGTCGGTGACGTCATTGC AAAGTCGGACTACGTGGTGGTGGCTGCCGCCCTCACTCCCGAAAGCAAGG GGATGGTCGGGGCGGCGGAGCTTGCCAGGGTGAGCGCGCGACAGACCGAA ATGATGTTCCCGCAGAAACACCGCGATAGCAACATCCTCGGCATTTTGCG GTGTTGATCCTCTTGCCCATTGAAAGACCCAACATAGTTACCGTAGCTTC GTGTCCGGCCGTCTCAAGAAACGAAAGGTGCCGAGCTGCCGCTTGTTGCT TGGAATGTGATATTCCTTTGAATGGACGGCTATTGGGTGAGGCGGGAGCG TAGAGGTAGGGTCGCGAGGGCACACTTTGCGGTGGTCGCTTGTTTCTCGT AGGAGAGGAACACTCATCGTGCATGCCCCACATTAGGCTGGTTTTTCTCT CCGGTCCCAAGTCTATACATCCCTGGCCGCAGTACCAGAACACATAAATA TACACCAAAAAGGTAGACCGTGTACCCCTTTGTCGTTCAATAGTCATGCG GATTCACCATTGCGTGTTACGTTTTTTGGTGGGTGCGTGGGTGTGTTTCT TTTGTTGGGTCTTTCATGGCAGGCCAAGCCCCACACGGTTATCATCAGCA TCGGGAGGGGTCCCCTGATCGACGAGGAGGCAATGACACTCGCGCTTCGA GACGGTCGCTTGCGGTAAGGAGAAAATTAAAGCTACAATAATACGTGCGC GCGATGGCGCCTCGGCGAACCGAAGAGAACCAAACACCGGCATCGCACAC GACCAGCAGCGTGCAGCAACATCCAAGCTTGTGGGTTTGCGCGATACATA GATCTGACCACCCCTGTGCAGGCCCGCGCGCTCGATGGGCAGTTCTTCTG TCACGTCGATCCGATCAGGCGTGGCTAAGGCAAGTCCACGACTGCGCACA AGGTGTGGCAAATATTTTCGGTGTCCGTCGGAAGAGCCACAGGATGAGAA AGAGTGTATCTATAAATATATTTTTCTGGCCCTATTTTGCCCCGCCATGA TTCTTTACCTCTGCGCTTTACCTGTCCCCCCCATCGATCACCTCTATATT TGCGACTTCTCTCGCGGTATTGCGATGTCGTCATCTCAAGGGGAGCCGCG CTCGACGTTTTTTGCGTCGAGCCCCTCCCGGAGGATAGCCCGCTGTGGGC CATGGAAAACGTGCTCTTGTCTTCACACAACGCGGATCTCACCGCCACGT TC
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Coding sequence (CDS) from alignment at H-elongata_contig68244:196..3297+

>mRNA_H-elongata_contig68244.14449.1 ID=mRNA_H-elongata_contig68244.14449.1|Name=mRNA_H-elongata_contig68244.14449.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1818bp|location=Sequence derived from alignment at H-elongata_contig68244:196..3297+ (Himanthalia elongata Himel1 dioecious)
AGGCTCGGCCCTCCGGCAGGCGAAGCGAAGATCGTTGTCATTGCTGAGAA
GGGAGACGACTCGCTGGTGGAGCTCGAGCGATTGCCTAAGAAAGCAACGC
TTCTGTTTCATGGGCTTAACATGGAAGATTTCTCCACCCCCGACGGGAAG
CGGGCCCTCGCCGAAGCCAACGTCTTCTTTGTCTGTGAGGAGGCTCGGCC
CTCCGGCAGGCGAAGCGAAGATCGTTGTCATTGCTGAGAAGGGAGACGAC
TCGCTGGTGGAGCTCGAGCGATTGCCTAAGAAAGCAACGCTTCTGTTTCA
TGGGCTTAACATGGAAGATTTCTCCACCCCCGACGGGAAGCGGGCCCTCG
CCGAAGCCAACGTCTTCTTTGTCTGTGAGGGCAACAAGGACCTGTTGAGC
CAGCTCCTTCCCCTGGCGCCCAAGCTTGCTTGGATTTCCAGTCGCAGCGC
CGGCGTGGATAGCCTTCTCTTCCCGGAGTTGGTGGAGAACGACGGCATCC
TCCTGACCAACGCGCGAGGACTGTTCAGCTCCTCGCTGGCGGAGTACTGC
CTTCTGTCCTGCCTTTATTTCGCCAAGGACGTGGACCGCTGGAAGCGCAA
CCAGCGCGAGAGGAAGTGGGAAAAATATACCGTGACCGAGGCAACAAGGA
CCTGTTGAGCCAGCTCCTTCCCCTGGCGCCCAAGCTTGCTTGGATTTCCA
GTCGCAGCGCCGGCGTGGATAGCCTTCTCTTCCCGGAGTTGGTGGAGAAC
GACGGCATCCTCCTGACCAACGCGCGAGGACTGTTCAGCTCCTCGCTGGC
GGAGTACTGCCTTCTGTCCTGCCTTTATTTCGCCAAGGACGTGGACCGCT
GGAAGCGCAACCAGCGCGAGAGGAAGTGGGAAAAATATACCGTGACCGAG
ATCTTGGGGTCAACGCTGGGAGTAATCGGGTACGGAGACATTGGCCAAGC
GTGCGCGCGCAAGGCGAAGGCGATGGGCATGAAGATCATCGCTCAGCGGC
GGCGCCCGGAGCTCTCTCGGGGAGACGGGGTAGCCGACGAAGTGCTGGGA
GATGGCCAGATCTTGGGGTCAACGCTGGGAGTAATCGGGTACGGAGACAT
TGGCCAAGCGTGCGCGCGCAAGGCGAAGGCGATGGGCATGAAGATCATCG
CTCAGCGGCGGCGCCCGGAGCTCTCTCGGGGAGACGGGGTAGCCGACGAA
GTGCTGGGAGATGGCCAGGTCGGTGACGTCATTGCAAAGTCGGACTACGT
GGTGGTGGCTGCCGCCCTCACTCCCGAAAGCAAGGGGATGGTCGGGGCGG
CGGAGCTTGCCAGGGTCGGTGACGTCATTGCAAAGTCGGACTACGTGGTG
GTGGCTGCCGCCCTCACTCCCGAAAGCAAGGGGATGGTCGGGGCGGCGGA
GCTTGCCAGGGCCAAGCCCCACACGGTTATCATCAGCATCGGGAGGGGTC
CCCTGATCGACGAGGAGGCAATGACACTCGCGCTTCGAGACGGTCGCTTG
CGGCCAAGCCCCACACGGTTATCATCAGCATCGGGAGGGGTCCCCTGATC
GACGAGGAGGCAATGACACTCGCGCTTCGAGACGGTCGCTTGCGGGGAGC
CGCGCTCGACGTTTTTTGCGTCGAGCCCCTCCCGGAGGATAGCCCGCTGT
GGGCCATGGAAAACGTGCTCTTGTCTTCACACAACGCGGATCTCACCGCC
ACGTTCGGGAGCCGCGCTCGACGTTTTTTGCGTCGAGCCCCTCCCGGAGG
ATAGCCCGCTGTGGGCCATGGAAAACGTGCTCTTGTCTTCACACAACGCG
GATCTCACCGCCACGTTC
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