mRNA_H-elongata_contig68164.14442.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig68164.14442.1 vs. uniprot
Match: A0A6H5JFR3_9PHAE (1,3-beta-glucan synthase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFR3_9PHAE) HSP 1 Score: 486 bits (1251), Expect = 2.180e-154 Identity = 253/314 (80.57%), Postives = 275/314 (87.58%), Query Frame = 1
Query: 1 ADDIEMLLKRFPNLRVAYIDEVRVSRNSLSSNKEYFSVLIKARPEMTM-----EQKGV---------IQEVYRIKPPGNPVVGEGKPENQNHATIFTRGEHLQAIDMNQEGYFEEALKMRCLLE*FRRCTPRNPTTIVGFREHIFTGSVSSLAHYMALQELSFVPLGQRVLNSPLRVRMHYGHPDLFDKVFFMTSGGTSKASSGINLSEDIFAGYNGTIRGRKAFFREYVQVGKGRDVGMQQIYKFESKLWQGTAEQTLSRDVSRLGDRLDFFRLMSFYFGGLGYYVGHFITVLTVTFLVYFILALAIFDKEAI 900
ADDIE+LLKRFPNLRVAYIDEVRVSR+S SS +EYFSVLIKA + ++G IQEVYR+K PGNPVVGEGKPENQNHA IFTRGEHLQAIDMNQEGYFEEALKMRCLLE FR T R P +VGFREHIFTGSVSSLA+YMALQELSFV LGQRVLN+PLRVRMHYGHPDLFDKVFFMT+GG SKAS GINLSEDIFAGYNGTIRG + FF+EYVQVGKGRDVGMQQIYKFE+KL QG AEQTLSRDV+RLGDRLDFFRL+SFYFGGLGYYVG+FITVLTVTF+VYF+LALA+FD+E+I
Sbjct: 1389 ADDIEILLKRFPNLRVAYIDEVRVSRDSTSSAQEYFSVLIKAHDQRGQGDADGSKRGGGGAGGRDDGIQEVYRVKLPGNPVVGEGKPENQNHAMIFTRGEHLQAIDMNQEGYFEEALKMRCLLEEFRGGTARRPAVVVGFREHIFTGSVSSLANYMALQELSFVTLGQRVLNNPLRVRMHYGHPDLFDKVFFMTAGGVSKASRGINLSEDIFAGYNGTIRGGQIFFKEYVQVGKGRDVGMQQIYKFEAKLSQGAAEQTLSRDVNRLGDRLDFFRLLSFYFGGLGYYVGNFITVLTVTFVVYFVLALAVFDEESI 1702
BLAST of mRNA_H-elongata_contig68164.14442.1 vs. uniprot
Match: A0A7S2UV62_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UV62_9STRA) HSP 1 Score: 398 bits (1022), Expect = 4.500e-124 Identity = 206/300 (68.67%), Postives = 244/300 (81.33%), Query Frame = 1
Query: 1 ADDIEMLLKRFPNLRVAYIDEVRVSRNSLSSNKEYFSVLIKARPEMTMEQKGVIQEVYRIKPPGNPVVGEGKPENQNHATIFTRGEHLQAIDMNQEGYFEEALKMRCLLE*FRRCTPRNPTTIVGFREHIFTGSVSSLAHYMALQELSFVPLGQRVLNSPLRVRMHYGHPDLFDKVFFMTSGGTSKASSGINLSEDIFAGYNGTIRGRKAFFREYVQVGKGRDVGMQQIYKFESKLWQGTAEQTLSRDVSRLGDRLDFFRLMSFYFGGLGYYVGHFITVLTVTFLVYFILALAIFDKEAI 900
ADDI+ +L R+PNLRVAYIDEVR +R++ + E++SVLIK + G ++E+YRIK PGNPV+GEGKPENQNHA +FTRGE+L AIDMNQ+ YFEEALKMR LL+ F + T P TI+GFREHIFTGSVSSLA+YMALQELSFV LGQRVLN+PLR R+HYGHPD+FDK+FFMT GG SKAS GINLSEDIFAG+N +RG F+EYVQVGKGRDVGMQQIYKFE+KL QG AEQ+LSRDV RL R+DF RL+S YFGGLG+Y+ F+TV TV F+VY + LA+F EAI
Sbjct: 900 ADDIDFILNRWPNLRVAYIDEVRNTRDATT---EFYSVLIK-------KAAGNVEEIYRIKLPGNPVLGEGKPENQNHAVVFTRGENLMAIDMNQDNYFEEALKMRNLLQEFHKSTRDVPITILGFREHIFTGSVSSLANYMALQELSFVTLGQRVLNNPLRQRLHYGHPDIFDKLFFMTRGGISKASKGINLSEDIFAGFNNQLRGGNVEFKEYVQVGKGRDVGMQQIYKFEAKLAQGNAEQSLSRDVHRLAARVDFGRLLSLYFGGLGFYINSFLTVFTVFFVVYLMTYLALFGLEAI 1189
BLAST of mRNA_H-elongata_contig68164.14442.1 vs. uniprot
Match: A0A835Z4B5_9STRA (1,3-beta-glucan synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4B5_9STRA) HSP 1 Score: 394 bits (1013), Expect = 2.970e-122 Identity = 207/301 (68.77%), Postives = 234/301 (77.74%), Query Frame = 1
Query: 1 ADDIEMLLKRFPNLRVAYIDEVRVSRNSLSSNKEYFSVLIKARPEMTMEQKGVIQEVYRIKPPGNPVVGEGKPENQNHATIFTRGEHLQAIDMNQEGYFEEALKMRCLLE*F-RRCTPRNPTTIVGFREHIFTGSVSSLAHYMALQELSFVPLGQRVLNSPLRVRMHYGHPDLFDKVFFMTSGGTSKASSGINLSEDIFAGYNGTIRGRKAFFREYVQVGKGRDVGMQQIYKFESKLWQGTAEQTLSRDVSRLGDRLDFFRLMSFYFGGLGYYVGHFITVLTVTFLVYFILALAIFDKEAI 900
ADDI+ LLKR+ NLR+AYIDE+ PGNPV+GEGKPENQNHA IFTRGEH+QAIDMNQEGYFEEA+KMRCLL+ F R+ P PTTIVGFREHIFTGSVSSLA+YMALQELSFV +GQRVL+ PLR+RMHYGHPDLFDKVFFMT GG SKAS GINLSEDIFAGYN TIRG + F EY QVGKGRDVGMQQIYKFE+KL QG AEQ+LSRDV+RLG RLDFFRL+SFYFGGLGYY+G+FIT++T+ F+VYF+LAL++F E I
Sbjct: 1154 ADDIDRLLKRYENLRIAYIDEL----------------------------------------PGNPVIGEGKPENQNHALIFTRGEHVQAIDMNQEGYFEEAIKMRCLLQEFLRKRDP--PTTIVGFREHIFTGSVSSLANYMALQELSFVTIGQRVLDDPLRIRMHYGHPDLFDKVFFMTRGGMSKASKGINLSEDIFAGYNNTIRGGQVVFCEYAQVGKGRDVGMQQIYKFEAKLAQGAAEQSLSRDVNRLGARLDFFRLVSFYFGGLGYYIGNFITIVTIVFVVYFMLALSVFQAEKI 1412
BLAST of mRNA_H-elongata_contig68164.14442.1 vs. uniprot
Match: B8CDT6_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CDT6_THAPS) HSP 1 Score: 367 bits (943), Expect = 1.450e-119 Identity = 188/300 (62.67%), Postives = 232/300 (77.33%), Query Frame = 1
Query: 1 ADDIEMLLKRFPNLRVAYIDEVRVSRNSLSSNKEYFSVLIKARPEMTMEQKGVIQEVYRIKPPGNPVVGEGKPENQNHATIFTRGEHLQAIDMNQEGYFEEALKMRCLLE*FRRCTPRNPTTIVGFREHIFTGSVSSLAHYMALQELSFVPLGQRVLNSPLRVRMHYGHPDLFDKVFFMTSGGTSKASSGINLSEDIFAGYNGTIRGRKAFFREYVQVGKGRDVGMQQIYKFESKLWQGTAEQTLSRDVSRLGDRLDFFRLMSFYFGGLGYYVGHFITVLTVTFLVYFILALAIFDKEAI 900
ADDI+ L+ R+P+LR+AYID VR++R S ++S L+K+ G IQE+YR++ GNP++GEGKPENQNHA IFTRGE +Q IDMNQEGYFEEALKMR L+ F + P TI+G REHIFTGSVSSLA+YMALQE SFV LGQRVL PL +R+HYGHPD+FDK+FF+T GG SK+S GINLSEDIFAGYN IRG + F+EY+QVGKGRDVGM QIY+FE+KL QG EQ+LSRDV RL RLDF RL+S+YFGG+G+Y + +TV+TV +VY + LA++D E I
Sbjct: 165 ADDIDQLMHRYPHLRIAYIDSVRLNR---SGEMAFYSCLVKSNGN------GKIQEIYRVRLAGNPILGEGKPENQNHAMIFTRGEFVQTIDMNQEGYFEEALKMRNALQEFAKRDGPMPITILGLREHIFTGSVSSLANYMALQETSFVTLGQRVLTKPLCIRLHYGHPDVFDKLFFITRGGISKSSKGINLSEDIFAGYNNAIRGGQVAFKEYIQVGKGRDVGMSQIYQFEAKLSQGAGEQSLSRDVYRLCHRLDFSRLLSYYFGGIGHYFSNVLTVITVYVVVYLMAILALYDLEKI 455
BLAST of mRNA_H-elongata_contig68164.14442.1 vs. uniprot
Match: W7U1M2_9STRA (1,3-beta-glucan synthase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U1M2_9STRA) HSP 1 Score: 386 bits (991), Expect = 5.760e-119 Identity = 199/301 (66.11%), Postives = 241/301 (80.07%), Query Frame = 1
Query: 1 ADDIEMLLKRFPNLRVAYIDEVRVSRNSLSSNKEYFSVLIKARPEMTMEQKGVIQEVYRIKPPGNPVVGEGKPENQNHATIFTRGEHLQAIDMNQEGYFEEALKMRCLLE*FRRC-TPRNPTTIVGFREHIFTGSVSSLAHYMALQELSFVPLGQRVLNSPLRVRMHYGHPDLFDKVFFMTSGGTSKASSGINLSEDIFAGYNGTIRGRKAFFREYVQVGKGRDVGMQQIYKFESKLWQGTAEQTLSRDVSRLGDRLDFFRLMSFYFGGLGYYVGHFITVLTVTFLVYFILALAIFDKEAI 900
ADDI+ LL+RFP+LRVAYIDE R S S +FSVLI+A T I+E+YR++ PGNPV+GEGKPENQNHA IF+RGEH+QAIDMNQEGYFE+A KMR L+ F +P PTTI+GFREHIFTG+VSSLA+YMALQE SFV LGQRVLN PLR+R+HYGHPDLFDK+FFM +GG SKAS GINLSEDIFAGYN +RG F+EYVQVGKGRDVGMQQIYKFE+KL QG AEQ++SRDV R+ +R+DFFRL+++YFGG+G+Y+ +TV + LVY +L+L++F E I
Sbjct: 1525 ADDIDFLLRRFPSLRVAYIDE----RQSKSGESSFFSVLIRANDAGTG-----IEEIYRVRLPGNPVLGEGKPENQNHAMIFSRGEHVQAIDMNQEGYFEDAYKMRNFLQEFALTGSPDMPTTILGFREHIFTGAVSSLANYMALQEYSFVTLGQRVLNRPLRMRLHYGHPDLFDKLFFMQNGGISKASKGINLSEDIFAGYNNLLRGGSVEFKEYVQVGKGRDVGMQQIYKFEAKLSQGAAEQSISRDVYRMVNRVDFFRLLTYYFGGIGHYLSSVLTVAAIWLLVYVLLSLSLFQHEKI 1816
BLAST of mRNA_H-elongata_contig68164.14442.1 vs. uniprot
Match: A0A482SV99_9ARCH (FKS1_dom1 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SV99_9ARCH) HSP 1 Score: 385 bits (989), Expect = 7.770e-119 Identity = 205/305 (67.21%), Postives = 239/305 (78.36%), Query Frame = 1
Query: 1 ADDIEMLLKRFPNLRVAYIDEVRVSRNSLSSNKEYFSVLIK-----ARPEMTMEQKGVIQEVYRIKPPGNPVVGEGKPENQNHATIFTRGEHLQAIDMNQEGYFEEALKMRCLLE*FRRCTPRNPTTIVGFREHIFTGSVSSLAHYMALQELSFVPLGQRVLNSPLRVRMHYGHPDLFDKVFFMTSGGTSKASSGINLSEDIFAGYNGTIRGRKAFFREYVQVGKGRDVGMQQIYKFESKLWQGTAEQTLSRDVSRLGDRLDFFRLMSFYFGGLGYYVGHFITVLTVTFLVYFILALAIFDKEAI 900
ADDIE LL R PNLRVAYID R + + +S Y+SVLIK A E E K VI+EV+RIK PGNPV+GEGKPENQNHA IFTRG LQAIDMNQ+GYFEEALKMR LLE F + IVGFREHIFTGSVSS+A+YMALQELSFV LGQRVLN PLR+R HYGHPDLFDK F MT GG SKAS GINLSED+FAG+N TIRG K F EYVQVGKGRDVG+QQ YKFE+KL QG AEQ+LSRDV R+ +RLDFFRL+SFY+GG+G+Y+ + + + T+ +VY +LA AI+++E +
Sbjct: 1220 ADDIEFLLARHPNLRVAYIDAYRSNPHEVS----YYSVLIKSEVVTAEGESKEEGKKVIKEVFRIKLPGNPVLGEGKPENQNHAVIFTRGRFLQAIDMNQDGYFEEALKMRNLLEEFNK-----QCAIVGFREHIFTGSVSSVANYMALQELSFVTLGQRVLNQPLRIRQHYGHPDLFDKFFVMTEGGMSKASKGINLSEDVFAGFNATIRGHKVDFVEYVQVGKGRDVGLQQTYKFEAKLSQGNAEQSLSRDVDRICNRLDFFRLLSFYYGGIGHYLSNVLVMFTLVIVVYTMLAQAIYNEEGV 1515
BLAST of mRNA_H-elongata_contig68164.14442.1 vs. uniprot
Match: B7FQP6_PHATC (1,3-beta-glucan synthase n=4 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FQP6_PHATC) HSP 1 Score: 383 bits (984), Expect = 4.640e-118 Identity = 195/300 (65.00%), Postives = 241/300 (80.33%), Query Frame = 1
Query: 1 ADDIEMLLKRFPNLRVAYIDEVRVSRNSLSSNKEYFSVLIKARPEMTMEQKGVIQEVYRIKPPGNPVVGEGKPENQNHATIFTRGEHLQAIDMNQEGYFEEALKMRCLLE*FRRCTPRNPTTIVGFREHIFTGSVSSLAHYMALQELSFVPLGQRVLNSPLRVRMHYGHPDLFDKVFFMTSGGTSKASSGINLSEDIFAGYNGTIRGRKAFFREYVQVGKGRDVGMQQIYKFESKLWQGTAEQTLSRDVSRLGDRLDFFRLMSFYFGGLGYYVGHFITVLTVTFLVYFILALAIFDKEAI 900
ADDIE L+ RFP +RVAYID +R++R+ S+ ++SVL+K+ +++G IQEVYR++ PG+PV+GEGKPENQNHA IFTRGE++Q IDMNQEGYFEEALKMR L+ F + PTTI+G REHIFTGSVSSLA+YMALQE+SFV LGQRVL PL +R+HYGHPD+FDK+FF+T GG SKAS GINLSEDIFAGYN IRG F+EYVQ+GKGRDVGM QIYKFE+KL QG AEQ+LSRDV R+ +RLDF RL+SFY+GG+G+Y + +T+ TV +VY + LAI+D E I
Sbjct: 1330 ADDIEALMHRFPLMRVAYIDNIRLNRSGASA---FYSVLVKS------DRRGNIQEVYRVRLPGDPVLGEGKPENQNHAMIFTRGEYVQTIDMNQEGYFEEALKMRNCLQEFAKREGPLPTTILGLREHIFTGSVSSLANYMALQEISFVTLGQRVLTRPLHIRLHYGHPDIFDKLFFITRGGVSKASRGINLSEDIFAGYNNVIRGGSVGFKEYVQIGKGRDVGMSQIYKFEAKLSQGAAEQSLSRDVYRMCNRLDFCRLLSFYYGGIGHYFSNVLTIFTVYVVVYLMTVLAIYDLEKI 1620
BLAST of mRNA_H-elongata_contig68164.14442.1 vs. uniprot
Match: A0A7S1UZ62_9STRA (1,3-beta-glucan synthase n=2 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UZ62_9STRA) HSP 1 Score: 381 bits (979), Expect = 2.210e-117 Identity = 196/300 (65.33%), Postives = 239/300 (79.67%), Query Frame = 1
Query: 1 ADDIEMLLKRFPNLRVAYIDEVRVSRNSLSSNKEYFSVLIKARPEMTMEQKGVIQEVYRIKPPGNPVVGEGKPENQNHATIFTRGEHLQAIDMNQEGYFEEALKMRCLLE*FRRCTPRNPTTIVGFREHIFTGSVSSLAHYMALQELSFVPLGQRVLNSPLRVRMHYGHPDLFDKVFFMTSGGTSKASSGINLSEDIFAGYNGTIRGRKAFFREYVQVGKGRDVGMQQIYKFESKLWQGTAEQTLSRDVSRLGDRLDFFRLMSFYFGGLGYYVGHFITVLTVTFLVYFILALAIFDKEAI 900
A+DIE L++RFP++RVAYID +R++R S ++SVL+K+ ++KG IQE+YR++ PGNPV+GEGKPENQNHA IFTR E LQ IDMNQEGYFEEALKMR L+ F + PTTI+G REHIFTGSVSSLA+YMALQELSFV LGQRVL PL +R+HYGHPD+FDK+FF+T GG SK+S GINLSEDIFAGYN IRG F+EY+QVGKGRDVGM QIYKFE+KL QG AEQ+LSRDV R+ +RLDF RL+SFY+GG+G+Y + +TVLTV + Y + LAI+D E I
Sbjct: 1343 ANDIEDLMRRFPHMRVAYIDNIRINRAGASV---FYSVLVKS------DKKGNIQEIYRVRLPGNPVIGEGKPENQNHAMIFTRSEFLQTIDMNQEGYFEEALKMRNCLQEFAKREGPLPTTILGLREHIFTGSVSSLANYMALQELSFVTLGQRVLTRPLHIRLHYGHPDVFDKLFFITRGGISKSSKGINLSEDIFAGYNNIIRGGSVGFKEYLQVGKGRDVGMSQIYKFEAKLSQGAAEQSLSRDVYRMCNRLDFCRLLSFYYGGIGHYFSNVLTVLTVYVVTYLMAVLAIYDLEKI 1633
BLAST of mRNA_H-elongata_contig68164.14442.1 vs. uniprot
Match: A0A1E7FFZ9_9STRA (1,3-beta-glucan synthase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FFZ9_9STRA) HSP 1 Score: 381 bits (979), Expect = 2.220e-117 Identity = 198/300 (66.00%), Postives = 236/300 (78.67%), Query Frame = 1
Query: 1 ADDIEMLLKRFPNLRVAYIDEVRVSRNSLSSNKEYFSVLIKARPEMTMEQKGVIQEVYRIKPPGNPVVGEGKPENQNHATIFTRGEHLQAIDMNQEGYFEEALKMRCLLE*FRRCTPRNPTTIVGFREHIFTGSVSSLAHYMALQELSFVPLGQRVLNSPLRVRMHYGHPDLFDKVFFMTSGGTSKASSGINLSEDIFAGYNGTIRGRKAFFREYVQVGKGRDVGMQQIYKFESKLWQGTAEQTLSRDVSRLGDRLDFFRLMSFYFGGLGYYVGHFITVLTVTFLVYFILALAIFDKEAI 900
ADDIE L+ RFP+LRVAYID +R++R+ + Y+SVL+K+ + KG I EVYR++ PGNPV+GEGKPENQNHA IFTR E LQ IDMNQEGYFEEALKMR L+ F + PTTI+G REHIFTGSVSSLA+YMALQE+SFV LGQRVL PL +R+HYGHPD+FDK+FF+T GG SK+S GINLSEDIFAGYN +RG F+EY+QVGKGRDVGM QIYKFE+KL QG AEQ+LSRDV R+ RLDF RL+SFY+GG+G+Y + +TVLTV +VY LAIFD E I
Sbjct: 1360 ADDIEALMHRFPHLRVAYIDSIRLNRDGTTV---YYSVLVKS------DGKGKILEVYRVRLPGNPVIGEGKPENQNHAMIFTRSEFLQTIDMNQEGYFEEALKMRNCLQEFAKREGPLPTTILGLREHIFTGSVSSLANYMALQEISFVTLGQRVLTRPLHIRLHYGHPDVFDKLFFITRGGVSKSSKGINLSEDIFAGYNNVMRGGSVGFKEYLQVGKGRDVGMSQIYKFEAKLSQGAAEQSLSRDVYRMCHRLDFCRLLSFYYGGIGHYFSNVLTVLTVYIVVYLSAVLAIFDLEKI 1650
BLAST of mRNA_H-elongata_contig68164.14442.1 vs. uniprot
Match: A0A7S2QVX6_9STRA (1,3-beta-glucan synthase (Fragment) n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2QVX6_9STRA) HSP 1 Score: 379 bits (972), Expect = 1.880e-116 Identity = 201/302 (66.56%), Postives = 237/302 (78.48%), Query Frame = 1
Query: 1 ADDIEMLLKRFPNLRVAYIDEVRVSRNSLSSNKEYFSVLIKARPEMTMEQKGVIQEVYRIKPPGNPVVGEGKPENQNHATIFTRGEHLQAIDMNQEGYFEEALKMRCLLE*FR--RCTPRNPTTIVGFREHIFTGSVSSLAHYMALQELSFVPLGQRVLNSPLRVRMHYGHPDLFDKVFFMTSGGTSKASSGINLSEDIFAGYNGTIRGRKAFFREYVQVGKGRDVGMQQIYKFESKLWQGTAEQTLSRDVSRLGDRLDFFRLMSFYFGGLGYYVGHFITVLTVTFLVYFILALAIFDKEAI 900
A+DIE L+ RFP++RVAYID VRV+R S +FSVL+K+ G I+E+YR++ PGNPV+GEGKPENQNHA IFTRGE LQ IDMNQEG+FEEALKMR LL+ F + + PTTIVGFREHIFTGSVSSLA+YMALQE SFV LGQRVLN PL R+HYGHPD+FDK+FFMT GG SKAS GINLSEDIFAGYN +RG F+EYVQ GKGRDVG QQIYKFE+KL QG AEQ+LSRDV R+ R+DFFRL+S YFGG+G+Y G+ +TV TV + Y +L LA++D E I
Sbjct: 1343 AEDIEDLMHRFPHVRVAYIDTVRVNREGESV---FFSVLVKSNGA------GKIEEIYRVRLPGNPVIGEGKPENQNHAVIFTRGEMLQTIDMNQEGFFEEALKMRNLLQEFDHGKGSEGMPTTIVGFREHIFTGSVSSLANYMALQETSFVTLGQRVLNKPLCSRLHYGHPDVFDKLFFMTRGGVSKASKGINLSEDIFAGYNNLVRGGGVDFKEYVQCGKGRDVGGQQIYKFEAKLSQGNAEQSLSRDVYRVAQRVDFFRLLSTYFGGIGHYCGNVLTVFTVYLVCYLMLGLALYDCEKI 1635 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig68164.14442.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig68164.14442.1 >prot_H-elongata_contig68164.14442.1 ID=prot_H-elongata_contig68164.14442.1|Name=mRNA_H-elongata_contig68164.14442.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=159bp MALQELSFVPLGQRVLNSPLRVRMHYGHPDLFDKVFFMTSGGTSKASSGIback to top mRNA from alignment at H-elongata_contig68164:559..3086+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig68164.14442.1 ID=mRNA_H-elongata_contig68164.14442.1|Name=mRNA_H-elongata_contig68164.14442.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2528bp|location=Sequence derived from alignment at H-elongata_contig68164:559..3086+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig68164:559..3086+ >mRNA_H-elongata_contig68164.14442.1 ID=mRNA_H-elongata_contig68164.14442.1|Name=mRNA_H-elongata_contig68164.14442.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=954bp|location=Sequence derived from alignment at H-elongata_contig68164:559..3086+ (Himanthalia elongata Himel1 dioecious)back to top |