mRNA_H-elongata_contig68146.14441.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig68146.14441.1 vs. uniprot
Match: D7G9J1_ECTSI (Chromosome 10 open reading frame 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9J1_ECTSI) HSP 1 Score: 238 bits (606), Expect = 4.220e-75 Identity = 152/262 (58.02%), Postives = 171/262 (65.27%), Query Frame = 1
Query: 1 MATKYYKLLFKEYALADLSRFREDKVGLRWRTEKDVVSGKGQFECGELRCQERRDLHSYEINFKYKEAGTVKNELVKVRVCPQCARKLFRKKIKALQRQQEEEMADRAYQEGNRRKKGIEASSSEGNEQEGSEGAVAGEARADGGRPEGSGVDDAAAVSGEGHDFVLRVVAAAEGGTRPSTALGIKRRRPSRWGDRVDAPVEVAASGGQEDAGAIRPGGDSVSRGTGAGSDGGAARRAWAGELERDRTAEDEMDDYLSSLLL 786
MA KYYKLLFKEYALADLSR+REDKVGLRWRTEKDVVSGKGQFECG LRCQER+DLHSYE+NFKYKEAG VKNELVKVRVCPQCARKLFRKKI+AL+RQ++ S G+V+ A DG + G +GEGHD + + VAAA GGT+ KR RPSRWGDR+D+ A + AG D A+R+AWAGELERDRTAEDEMDDYLSSLLL
Sbjct: 1 MAAKYYKLLFKEYALADLSRYREDKVGLRWRTEKDVVSGKGQFECGALRCQERKDLHSYELNFKYKEAGAVKNELVKVRVCPQCARKLFRKKIEALRRQRKAXXXXXXXXXXXXXXXXXXXXXXXXXXSSPS-GSVS--ATPDGNADDRHGRKLRETSAGEGHDLIRQAVAAA-GGTQTDAK---KRNRPSRWGDRLDSSERTAXXXXXXXXXXXXXXXXXXAM---AGDD--ASRKAWAGELERDRTAEDEMDDYLSSLLL 250
BLAST of mRNA_H-elongata_contig68146.14441.1 vs. uniprot
Match: A0A7S2WRJ6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WRJ6_9STRA) HSP 1 Score: 135 bits (341), Expect = 2.570e-35 Identity = 63/98 (64.29%), Postives = 80/98 (81.63%), Query Frame = 1
Query: 1 MATKYYKLLFKEYALADLSRFREDKVGLRWRTEKDVVSGKGQFECGELRCQERRDLHSYEINFKYKEAGTVKNELVKVRVCPQCARKLFRKKIKALQR 294
M+ KYYK LFKEYALAD+SR+RE K+GLRWRTE++VV GKGQF CG +C R LHS+E+NFKYKE GTV+NELVK+R+C +CA+K+ + K L+R
Sbjct: 52 MSIKYYKKLFKEYALADMSRYREGKIGLRWRTEQEVVDGKGQFVCGNKKCDTRDGLHSFEVNFKYKEHGTVRNELVKLRLCRRCAKKMTYYRDKHLKR 149
BLAST of mRNA_H-elongata_contig68146.14441.1 vs. uniprot
Match: A0A8K1C360_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C360_PYTOL) HSP 1 Score: 134 bits (336), Expect = 2.470e-34 Identity = 64/95 (67.37%), Postives = 74/95 (77.89%), Query Frame = 1
Query: 1 MATKYYKLLFKEYALADLSRFREDKVGLRWRTEKDVVSGKGQFECGELRCQERRDLHSYEINFKYKEAGTVKNELVKVRVCPQCARKLFRKKIKA 285
M+ +YY+ LF+EYALADLSR+ E K+GLRWRTE++VVSGKGQF CG RC ERR LHSYE+ F Y E G K LVKVR C CARKLF KK+KA
Sbjct: 82 MSVRYYRQLFREYALADLSRYEEGKIGLRWRTEQEVVSGKGQFSCGNKRCDERRRLHSYELLFAYVEQGEKKRCLVKVRACEACARKLFYKKLKA 176
BLAST of mRNA_H-elongata_contig68146.14441.1 vs. uniprot
Match: A0A7S1SWE2_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SWE2_9CHLO) HSP 1 Score: 128 bits (322), Expect = 2.100e-33 Identity = 62/98 (63.27%), Postives = 75/98 (76.53%), Query Frame = 1
Query: 1 MATKYYKLLFKEYALADLSRFREDKVGLRWRTEKDVVSGKGQFECGELRCQERRDLHSYEINFKYKEAGTVKNELVKVRVCPQCARKLFRKKIKALQR 294
+A KYY LFKEY LADLSR++E K+G+RWRTEK+VVSGKGQF CG +C R+ L SYE+NF YKEAG K LVK+RVCP+CA KL + KA +R
Sbjct: 72 LARKYYAKLFKEYCLADLSRYKESKIGMRWRTEKEVVSGKGQFVCGNKQCGNRQGLGSYEVNFGYKEAGEHKQALVKLRVCPECADKLNYNRKKAYRR 169
BLAST of mRNA_H-elongata_contig68146.14441.1 vs. uniprot
Match: A0A225VMT6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VMT6_9STRA) HSP 1 Score: 127 bits (318), Expect = 1.980e-32 Identity = 61/93 (65.59%), Postives = 71/93 (76.34%), Query Frame = 1
Query: 1 MATKYYKLLFKEYALADLSRFREDKVGLRWRTEKDVVSGKGQFECGELRCQERRDLHSYEINFKYKEAGTVKNELVKVRVCPQCARKLFRKKI 279
M+ +YY+ LF+EYALADLSR++E KVGLRWRTE +VV+GKGQF CG RC ER LHSYE+ F Y E G K LVKVRVC CA KLF KK+
Sbjct: 35 MSVRYYRQLFREYALADLSRYKEGKVGLRWRTEMEVVAGKGQFSCGNKRCDERTGLHSYELLFAYVEHGERKRCLVKVRVCSTCAEKLFYKKL 127
BLAST of mRNA_H-elongata_contig68146.14441.1 vs. uniprot
Match: A0A1Y1IE55_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IE55_KLENI) HSP 1 Score: 129 bits (324), Expect = 2.500e-32 Identity = 64/100 (64.00%), Postives = 76/100 (76.00%), Query Frame = 1
Query: 1 MATKYYKLLFKEYALADLSRFREDKVGLRWRTEKDVVSGKGQFECGELRCQERRDLHSYEINFKYKEAGTVKNELVKVRVCPQCARKLFRKKIKALQRQQ 300
+A +YY LFKEY +ADLSR++E KVGLRWRTEK+VV+GKGQF CG ER L SYE+NF YKEAG KN LVK+R+CP+CA KL +K K L RQQ
Sbjct: 86 LAKRYYDKLFKEYCIADLSRYKESKVGLRWRTEKEVVAGKGQFICGNKEHGERNGLRSYEVNFAYKEAGEEKNALVKLRLCPKCAYKLNYRKEKELARQQ 185
BLAST of mRNA_H-elongata_contig68146.14441.1 vs. uniprot
Match: A0A2P4XK42_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XK42_9STRA) HSP 1 Score: 126 bits (316), Expect = 2.980e-32 Identity = 61/107 (57.01%), Postives = 78/107 (72.90%), Query Frame = 1
Query: 1 MATKYYKLLFKEYALADLSRFREDKVGLRWRTEKDVVSGKGQFECGELRCQERRDLHSYEINFKYKEAGTVKNELVKVRVCPQCARKLFRKKIKALQRQQEEEMADR 321
M+ +YY+ LF+EYALADLSR++E K+GLRWRTE +V++GKGQF CG RC ER LHSYE+ F Y E G K LVKVR C CA KLF KK+ ++R++ +M R
Sbjct: 83 MSVRYYRQLFREYALADLSRYKEGKIGLRWRTEMEVIAGKGQFSCGNKRCDERTGLHSYELLFAYVEHGERKRCLVKVRACSVCAEKLFYKKLMEVKRKKMRKMEKR 189
BLAST of mRNA_H-elongata_contig68146.14441.1 vs. uniprot
Match: A0A3M6V8Y6_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6V8Y6_9STRA) HSP 1 Score: 128 bits (321), Expect = 3.180e-32 Identity = 61/107 (57.01%), Postives = 79/107 (73.83%), Query Frame = 1
Query: 1 MATKYYKLLFKEYALADLSRFREDKVGLRWRTEKDVVSGKGQFECGELRCQERRDLHSYEINFKYKEAGTVKNELVKVRVCPQCARKLFRKKIKALQRQQEEEMADR 321
M+ +YY+ LF+EYALADLSR++E K+GLRWRTE +VV+GKGQF CG C ER LHSYE+ F Y E G K LVKVR C CA KLF +K++ ++R++E E +R
Sbjct: 62 MSVRYYRQLFREYALADLSRYKEGKIGLRWRTEMEVVAGKGQFSCGNKHCDERTGLHSYELLFAYVELGERKRCLVKVRACSSCAEKLFYRKLEEMRRKKEVERRER 168
BLAST of mRNA_H-elongata_contig68146.14441.1 vs. uniprot
Match: A0A8J5J5U4_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A8J5J5U4_9STRA) HSP 1 Score: 127 bits (320), Expect = 3.960e-32 Identity = 61/98 (62.24%), Postives = 73/98 (74.49%), Query Frame = 1
Query: 1 MATKYYKLLFKEYALADLSRFREDKVGLRWRTEKDVVSGKGQFECGELRCQERRDLHSYEINFKYKEAGTVKNELVKVRVCPQCARKLFRKKIKALQR 294
M+ +YY+ LF+EYALADLSRF+E K+GLRWRTE +VV+GKGQF CG RC ER LHSYE+ F Y E G K LVKVR C CA KLF KK+ ++R
Sbjct: 62 MSVRYYRQLFREYALADLSRFKEGKIGLRWRTEMEVVAGKGQFSCGNKRCDERAGLHSYELLFAYMEHGERKRCLVKVRACSACAEKLFYKKLMEMRR 159
BLAST of mRNA_H-elongata_contig68146.14441.1 vs. uniprot
Match: A0A662X149_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X149_9STRA) HSP 1 Score: 127 bits (320), Expect = 5.690e-32 Identity = 62/100 (62.00%), Postives = 76/100 (76.00%), Query Frame = 1
Query: 1 MATKYYKLLFKEYALADLSRFREDKVGLRWRTEKDVVSGKGQFECGELRCQERRDLHSYEINFKYKEAGTVKNELVKVRVCPQCARKLFRKKIKALQRQQ 300
M+ +YY+ LF+EYALADLSRF E K+GLRWRTE +VVSGKGQF CG RC R +LHSYE+ F Y E G K LVKVRVC CA KLF +K++ L+++Q
Sbjct: 66 MSVRYYRQLFREYALADLSRFEEGKIGLRWRTEMEVVSGKGQFSCGNKRCDARAELHSYELLFAYVEHGERKRCLVKVRVCGVCAEKLFYQKLQELRKKQ 165 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig68146.14441.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig68146.14441.1 >prot_H-elongata_contig68146.14441.1 ID=prot_H-elongata_contig68146.14441.1|Name=mRNA_H-elongata_contig68146.14441.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=263bp MATKYYKLLFKEYALADLSRFREDKVGLRWRTEKDVVSGKGQFECGELRCback to top mRNA from alignment at H-elongata_contig68146:690..2212- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig68146.14441.1 ID=mRNA_H-elongata_contig68146.14441.1|Name=mRNA_H-elongata_contig68146.14441.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1523bp|location=Sequence derived from alignment at H-elongata_contig68146:690..2212- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig68146:690..2212- >mRNA_H-elongata_contig68146.14441.1 ID=mRNA_H-elongata_contig68146.14441.1|Name=mRNA_H-elongata_contig68146.14441.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1578bp|location=Sequence derived from alignment at H-elongata_contig68146:690..2212- (Himanthalia elongata Himel1 dioecious)back to top |