mRNA_H-elongata_contig6801.14424.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig6801.14424.1 vs. uniprot
Match: D7G4Q4_ECTSI (Mtg2, mitochondrial Obg/CtgA-like GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4Q4_ECTSI) HSP 1 Score: 348 bits (892), Expect = 2.970e-115 Identity = 183/255 (71.76%), Postives = 210/255 (82.35%), Query Frame = 1
Query: 1 QFVDKVRIVANGGKGGNGCISLEGESATKKRPSGGTGGAGGNVYAIADNSLETLDSKLHHFNGQPGXXXXXXXXXXXXXKNTYVRVPCGTLVFEVTAKEQAYGGFHPWSLAEGIECGGGKGEGEG--GTEDHREYGHRNDEYEGQEDGEKGE---MRSVADLEKHGERVLLASGGKPGLGNLNMASRRVGTKLPGQRGESRHYQFELRTIADVGLVGYPNAGKSTLLGCITAAKPKVAMYPFTTLTPVVGHVEYS 750
+FVDK+RI+A+GGKGG+GCISLEG++ T+KRPSGG+GGAGGNVYAIAD SLETLDS+LHHFNGQPG K+ Y+RVPCGTLV EV +E+ YG FHPW+LA GIECGG K +G G E E D Y G ++GE+GE +R VADLEK G++VLLASGGKPGLGNL++ASRRVGTK+PGQRGESRHY+FELRTIADVGLVGYPNAGKSTLLGCIT+AKPKVAMYPFTTLTPVVGHVEYS
Sbjct: 56 KFVDKLRILASGGKGGDGCISLEGDNPTRKRPSGGSGGAGGNVYAIADGSLETLDSQLHHFNGQPGNAGGGSGKKGRTGKDAYIRVPCGTLVSEVVQEEEHYG-FHPWALAGGIECGGEKSIAQGAEGEEGGEESAFDGDIYWGGDNGEEGEEEEVRYVADLEKDGDKVLLASGGKPGLGNLHVASRRVGTKIPGQRGESRHYRFELRTIADVGLVGYPNAGKSTLLGCITSAKPKVAMYPFTTLTPVVGHVEYS 309
BLAST of mRNA_H-elongata_contig6801.14424.1 vs. uniprot
Match: A0A6H5KQG3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQG3_9PHAE) HSP 1 Score: 238 bits (606), Expect = 3.730e-74 Identity = 127/175 (72.57%), Postives = 145/175 (82.86%), Query Frame = 1
Query: 238 KNTYVRVPCGTLVFEVTAKEQAYGGFHPWSLAEGIECGGGKGEGEG--GTEDHREYGHRNDEYEGQE--DGEKGEMRSVADLEKHGERVLLASGGKPGLGNLNMASRRVGTKLPGQRGESRHYQFELRTIADVGLVGYPNAGKSTLLGCITAAKPKVAMYPFTTLTPVVGHVEYS 750
K+ Y+RVPCGTLV EV +E+ YG FHPW+LA GIECGG K +G G E E D Y G++ + E+ E+R VADLEK G++VLLASGGKPGLGNL++ASRRVGTK+PGQRGESRHY+FELRTIADVGLVGYPNAGKSTLLGCIT+AKPKVAMYPFTTLTPVVGHVEYS
Sbjct: 18 KDAYIRVPCGTLVSEVVQEEEKYG-FHPWALAGGIECGGKKSIAQGAEGEEGGEESAFDGDSYWGEDNHEEEEEEVRYVADLEKDGDKVLLASGGKPGLGNLHVASRRVGTKIPGQRGESRHYRFELRTIADVGLVGYPNAGKSTLLGCITSAKPKVAMYPFTTLTPVVGHVEYS 191
BLAST of mRNA_H-elongata_contig6801.14424.1 vs. uniprot
Match: A0A0P1B492_PLAHL (Obg family gtpase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B492_PLAHL) HSP 1 Score: 173 bits (439), Expect = 3.780e-48 Identity = 109/259 (42.08%), Postives = 138/259 (53.28%), Query Frame = 1
Query: 1 QFVDKVRIVANGGKGGNGCISLEGESATKKRPSGGTGGAGGNVYAIADNSLETLDSKLHHFNGQPGXXXXXXXXXXXXXKNTYVRVPCGTLVFEVTAKEQAYGGFHPWSLAEGIECGGGKGEGEGGTEDHREYGHRNDEYEGQEDGEKGEMRSVADLEKHGERVLLASGGKPGLGNLNMASRRVGT----------KLPGQRGESRHYQFELRTIADVGLVGYPNAGKSTLLGCITAAKPKVAMYPFTTLTPVVGHVEY 747
+FVD++RI A GG GGNGC S ES T+KRP+GG GGAGG+V A++ ++ L + HHF G+ G K YV+VPCGTLV V E+ ++ G EYE + M VADL+K G L A GGKPGLGN +A + + K G G S++Y+ EL+TIADVGLVGYPNAGKSTLL ++ A P +A YPFTTL P VG VE+
Sbjct: 85 RFVDRIRIKATGGHGGNGCASFVAESTTRKRPNGGHGGAGGDVIIEANDKVQNLANATHHFKGESGTNGMPNDSAGKRGKYCYVKVPCGTLVKRVERYERE------------MDTG---------------------EYEVVD-----RMEVVADLDKPGTTFLAAKGGKPGLGNRILAGKTTKSGRLRKLMPENKTRGSPGTSQYYELELKTIADVGLVGYPNAGKSTLLSVLSRATPAIAPYPFTTLHPYVGIVEF 305
BLAST of mRNA_H-elongata_contig6801.14424.1 vs. uniprot
Match: A0A3R7ITC1_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7ITC1_9STRA) HSP 1 Score: 174 bits (440), Expect = 4.720e-48 Identity = 108/259 (41.70%), Postives = 135/259 (52.12%), Query Frame = 1
Query: 1 QFVDKVRIVANGGKGGNGCISLEGESATKKRPSGGTGGAGGNVYAIADNSLETLDSKLHHFNGQPGXXXXXXXXXXXXXKNTYVRVPCGTLVFEVTAKEQAYGGFHPWSLAEGIECGGGKGEGEGGTEDHREYGHRNDEYEGQEDGEKGEMRSVADLEKHGERVLLASGGKPGLGNLNMASRRVG----------TKLPGQRGESRHYQFELRTIADVGLVGYPNAGKSTLLGCITAAKPKVAMYPFTTLTPVVGHVEY 747
+FVD++R+ A GG GGNGC S ESAT+KRP+GG GAGG+V A ++ L + HHF G G K+ YV+VPCGTLV V E+ N EYE + +M V DL+K G L A GGKPGLGN +A + TK G G S++Y+ EL+TIADVGLVGYPNAGKSTLL ++ A P++A YPFTTL P VG VE+
Sbjct: 100 RFVDRIRVKATGGHGGNGCASFFSESATRKRPNGGXXGAGGDVVIEASGKMQNLANATHHFKGGAGLNGMSNDAAGRRGKHCYVKVPCGTLVKRVERYEREL---------------------------------ENGEYEIVD-----QMEVVCDLDKPGSTFLAAQGGKPGLGNRILAGKTTKFGRLRKHMPETKGTGHPGTSQYYELELKTIADVGLVGYPNAGKSTLLSVLSRATPEIAPYPFTTLHPYVGIVEF 320
BLAST of mRNA_H-elongata_contig6801.14424.1 vs. uniprot
Match: A0A024FZD6_9STRA (Uncharacterized protein n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024FZD6_9STRA) HSP 1 Score: 174 bits (441), Expect = 6.270e-48 Identity = 107/259 (41.31%), Postives = 137/259 (52.90%), Query Frame = 1
Query: 1 QFVDKVRIVANGGKGGNGCISLEGESATKKRPSGGTGGAGGNVYAIADNSLETLDSKLHHFNGQPGXXXXXXXXXXXXXKNTYVRVPCGTLVFEVTAKEQAYGGFHPWSLAEGIECGGGKGEGEGGTEDHREYGHRNDEYEGQEDGEKGEMRSVADLEKHGERVLLASGGKPGLGNLNMASRRV--GT--------KLPGQRGESRHYQFELRTIADVGLVGYPNAGKSTLLGCITAAKPKVAMYPFTTLTPVVGHVEY 747
+FVD++RI GG GGNGC S E + + +KRPSGG GGAGG V AD++++ L S HHF G+ G RVPCGT+V +V +E G + + E +E ++ DL++HG + + A GGKPGLGN + SR GT K GQ G S HY+ EL+TIADVGLVGYPNAGKSTLL ++ A PK+A YPFTTL P VG VE+
Sbjct: 136 RFVDRIRIKVVGGYGGNGCCSFEAKKSFRKRPSGGHGGAGGAVIVQADSAVQDLASSTHHFKGERGQNGKPNAGAGRCGSACIFRVPCGTIVNKVI-RETIGTGCEDFDITERLE-------------------------------------NICDLDRHGNQFVAAEGGKPGLGNRVLLSRTTTFGTLRNKMDEGKNLGQPGTSHHYELELKTIADVGLVGYPNAGKSTLLSRLSRASPKIAPYPFTTLHPFVGIVEF 356
BLAST of mRNA_H-elongata_contig6801.14424.1 vs. uniprot
Match: K3W6W2_GLOUD (Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3W6W2_GLOUD) HSP 1 Score: 172 bits (436), Expect = 2.590e-47 Identity = 108/259 (41.70%), Postives = 140/259 (54.05%), Query Frame = 1
Query: 1 QFVDKVRIVANGGKGGNGCISLEGESATKKRPSGGTGGAGGNVYAIADNSLETLDSKLHHFNGQPGXXXXXXXXXXXXXKNTYVRVPCGTLVFEVTAKEQAYGGFHPWSLAEGIECGGGKGEGEGGTEDHREYGHRNDEYEGQEDGEKGEMRSVADLEKHGERVLLASGGKPGLGNLNMASR-----RVGTKLP-----GQRGESRHYQFELRTIADVGLVGYPNAGKSTLLGCITAAKPKVAMYPFTTLTPVVGHVEY 747
+FVD++RI A GG GGNGC S ESA +KRP+GG GGAGGNV AD+ ++ L + HHF G G K+ +V+VPCGTLV V E+ N E+E + +M +V DL++ G L A GGKPGLGN +A + R+ +P G G S++Y+ EL+TIADVGLVGYPNAGKSTLL ++ A P++A YPFTTL P VG VE+
Sbjct: 119 RFVDRIRIKATGGHGGNGCASFFSESAMRKRPNGGHGGAGGNVVIEADDCIQNLANATHHFKGGAGLNGMPNDAAGRRGKHCFVKVPCGTLVKRVKRFEREL---------------------------------ENGEFEIVD-----KMETVCDLDQPGATFLAAIGGKPGLGNRILAGKTTNFGRLRKHMPDNKGVGSPGTSQYYELELKTIADVGLVGYPNAGKSTLLSTLSRATPEIAPYPFTTLHPYVGIVEF 339
BLAST of mRNA_H-elongata_contig6801.14424.1 vs. uniprot
Match: F0W392_9STRA (GTPase putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W392_9STRA) HSP 1 Score: 172 bits (435), Expect = 5.980e-47 Identity = 111/259 (42.86%), Postives = 139/259 (53.67%), Query Frame = 1
Query: 1 QFVDKVRIVANGGKGGNGCISLEGESATKKRPSGGTGGAGGNVYAIADNSLETLDSKLHHFNGQPGXXXXXXXXXXXXXKNTYVRVPCGTLVFEVTAKEQAYGGFHPWSLAEGIECGGGKGEGEGGTEDHREYGHRNDEYEGQEDGEKGEMRSVADLEKHGERVLLASGGKPGLGNLNMASRRV--GT--------KLPGQRGESRHYQFELRTIADVGLVGYPNAGKSTLLGCITAAKPKVAMYPFTTLTPVVGHVEY 747
+FVD++RI A GG GGNGC S +++ KRPSGG GGAGG V AD++++ L S HHF G G RVPCGT+V +VT +E ECG ++ D +E + S+ DL++HG + + A GGKPGLGN + SR GT K GQ G S HY+ EL+ IADVGLVGYPNAGKSTLL ++ A PKVA YPFTTL P VG VE+
Sbjct: 149 RFVDRIRIKAAGGYGGNGCCSFNAKNSFTKRPSGGHGGAGGAVIIQADSAVQDLASSTHHFKGGSGQNGKPNEGAGRCGSACIFRVPCGTIVKKVTREEIE------------TECG--------------DF----DVFE--------RLESIYDLDRHGSQFVAAEGGKPGLGNRVLLSRTTTFGTLKNKMDEGKNIGQPGTSNHYELELKIIADVGLVGYPNAGKSTLLSRLSRASPKVAPYPFTTLHPFVGIVEF 369
BLAST of mRNA_H-elongata_contig6801.14424.1 vs. uniprot
Match: G4YIK5_PHYSP (Uncharacterized protein n=17 Tax=Phytophthora TaxID=4783 RepID=G4YIK5_PHYSP) HSP 1 Score: 163 bits (413), Expect = 2.480e-44 Identity = 104/259 (40.15%), Postives = 135/259 (52.12%), Query Frame = 1
Query: 1 QFVDKVRIVANGGKGGNGCISLEGESATKKRPSGGTGGAGGNVYAIADNSLETLDSKLHHFNGQPGXXXXXXXXXXXXXKNTYVRVPCGTLVFEVTAKEQAYGGFHPWSLAEGIECGGGKGEGEGGTEDHREYGHRNDEYEGQEDGEKGEMRSVADLEKHGERVLLASGGKPGLGNLNMASR-----RVGTKLP-----GQRGESRHYQFELRTIADVGLVGYPNAGKSTLLGCITAAKPKVAMYPFTTLTPVVGHVEY 747
+FVD++R+ A GG GGNGC S ESA +KRP+G AGG+V A + ++ L + HHF G G K+ V+VPCGTLV V E+ N EYE + +M +V DL+K G L A GGKPGLGN +A + R+ +P G G S++Y+ EL+TIADVGLVGYPNAGKSTLL ++ A P++A YPFTTL P VG VE+
Sbjct: 74 RFVDRIRVKATGGHGGNGCASFFAESAMRKRPNGXXXXAGGDVVIEASDKMQNLANATHHFKGGAGTNGMPNDAAGRRGKHCVVKVPCGTLVKRVERYEREL---------------------------------ENGEYEIVD-----QMETVCDLDKPGATFLAAKGGKPGLGNRILAGKTTKFGRLRKHMPENKTTGHPGTSQYYELELKTIADVGLVGYPNAGKSTLLSVLSRATPEIAPYPFTTLHPYVGIVEF 294
BLAST of mRNA_H-elongata_contig6801.14424.1 vs. uniprot
Match: A0A484DR68_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DR68_BRELC) HSP 1 Score: 163 bits (412), Expect = 5.250e-44 Identity = 103/259 (39.77%), Postives = 134/259 (51.74%), Query Frame = 1
Query: 1 QFVDKVRIVANGGKGGNGCISLEGESATKKRPSGGTGGAGGNVYAIADNSLETLDSKLHHFNGQPGXXXXXXXXXXXXXKNTYVRVPCGTLVFEVTAKEQAYGGFHPWSLAEGIECGGGKGEGEGGTEDHREYGHRNDEYEGQEDGEKGEMRSVADLEKHGERVLLASGGKPGLGNLNMASRRV----------GTKLPGQRGESRHYQFELRTIADVGLVGYPNAGKSTLLGCITAAKPKVAMYPFTTLTPVVGHVEY 747
+FVD++R+ A GG GGNGC S ESAT+KRP+ AGG+V A ++ L + HHF G G K+ +++VPCGTLV V E+ H + E+E + +M VADL+K G L ASGGKPGLGN +A + K G G S++Y+ EL+TIADVGLVGYPNAGKSTLL ++ A P++A YPFTTL P VG VE+
Sbjct: 85 RFVDRIRVKATGGHGGNGCASFFSESATRKRPNXXXXXAGGDVVIEASAQMQNLANATHHFKGGSGTNGMPNDAAGRRGKHCFLKVPCGTLVKRVERYERE---------------------------------HESGEFEIVD-----KMEIVADLDKPGTTFLAASGGKPGLGNRILAGKTTMFGQLRKHMPENKTTGLPGTSQYYELELKTIADVGLVGYPNAGKSTLLSVLSCATPEIAPYPFTTLHPYVGIVEF 305
BLAST of mRNA_H-elongata_contig6801.14424.1 vs. uniprot
Match: A0A3M6VI35_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VI35_9STRA) HSP 1 Score: 159 bits (403), Expect = 1.070e-42 Identity = 102/259 (39.38%), Postives = 134/259 (51.74%), Query Frame = 1
Query: 1 QFVDKVRIVANGGKGGNGCISLEGESATKKRPSGGTGGAGGNVYAIADNSLETLDSKLHHFNGQPGXXXXXXXXXXXXXKNTYVRVPCGTLVFEVTAKEQAYGGFHPWSLAEGIECGGGKGEGEGGTEDHREYGHRNDEYEGQEDGEKGEMRSVADLEKHGERVLLASGGKPGLGNLNMASR-----RVGTKLP-----GQRGESRHYQFELRTIADVGLVGYPNAGKSTLLGCITAAKPKVAMYPFTTLTPVVGHVEY 747
+FVD++R+ A GG GGNGC S ESA +KRP+ AGG+V A+ ++ L + HHF G K+ +V+VPCGTL+ V E+ N E+E + M VADL+K G L A GGKPGLGN +A + R+ +P GQ G S++Y+ EL+TIADVGLVGYPNAGKSTLL ++ A P++A YPFTTL P VG VE+
Sbjct: 92 RFVDRIRVKATGGHGGNGCASFFSESAVRKRPNXXXXXAGGDVVIEANEKMQNLGNATHHFRAGAGTNGMANDSAGKRGKHFHVKVPCGTLIKRVERYEREL---------------------------------ENGEFEIVD-----RMEVVADLDKPGATFLAAKGGKPGLGNRILAGKTTTFGRLRKHMPENKTTGQPGTSQYYELELKTIADVGLVGYPNAGKSTLLSVLSRATPEIAPYPFTTLHPYVGIVEF 312 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6801.14424.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig6801.14424.1 >prot_H-elongata_contig6801.14424.1 ID=prot_H-elongata_contig6801.14424.1|Name=mRNA_H-elongata_contig6801.14424.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=250bp QFVDKVRIVANGGKGGNGCISLEGESATKKRPSGGTGGAGGNVYAIADNSback to top mRNA from alignment at H-elongata_contig6801:7650..10560+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig6801.14424.1 ID=mRNA_H-elongata_contig6801.14424.1|Name=mRNA_H-elongata_contig6801.14424.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2911bp|location=Sequence derived from alignment at H-elongata_contig6801:7650..10560+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig6801:7650..10560+ >mRNA_H-elongata_contig6801.14424.1 ID=mRNA_H-elongata_contig6801.14424.1|Name=mRNA_H-elongata_contig6801.14424.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1500bp|location=Sequence derived from alignment at H-elongata_contig6801:7650..10560+ (Himanthalia elongata Himel1 dioecious)back to top |