mRNA_H-elongata_contig67814.14395.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig67814.14395.1 vs. uniprot
Match: D8LGI7_ECTSI (TIP120 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGI7_ECTSI) HSP 1 Score: 299 bits (766), Expect = 1.400e-91 Identity = 148/187 (79.14%), Postives = 163/187 (87.17%), Query Frame = 1
Query: 1 YLPGILNAFVSSVKHQYLLLSSLKEVIVCHAITDGLDFSPYVDQVLPHMFTHCTSEEEGVRNMVAECLGALTCMHPYRLLPELVKLPGYDVCDVCLVWTLATSLKYCMAGKAPVEALSPYMEGFLVMLHDEDLDVKKAALLMVNAAVHHQPFLVSELLPKMVIPALYQTIGLKLERIVDLGPFKHKA 561
YLPGIL+AF SVKHQYLLLSSLKEVIVCHA T GL+F PYVDQVLPH+F HCTS+EEGVRNMVAECLG LT MHP RL+PEL+KLPG D + +WTLATSLKYCMAG APVE LSP+ME FL M++++DLDVKKAALLMVNAAVHHQPFLVSELLP +IPALY T+ LKLERIVDLGPFKHK
Sbjct: 835 YLPGILDAFERSVKHQYLLLSSLKEVIVCHANTPGLEFGPYVDQVLPHLFQHCTSDEEGVRNMVAECLGVLTSMHPQRLVPELLKLPG-DKPNPLTLWTLATSLKYCMAGNAPVEELSPHMESFLEMMNNDDLDVKKAALLMVNAAVHHQPFLVSELLPGQIIPALYTTVELKLERIVDLGPFKHKV 1020
BLAST of mRNA_H-elongata_contig67814.14395.1 vs. uniprot
Match: A0A7S2CRP2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CRP2_9STRA) HSP 1 Score: 213 bits (541), Expect = 4.220e-64 Identity = 109/191 (57.07%), Postives = 133/191 (69.63%), Query Frame = 1
Query: 1 YLPGILNAFVSSVKHQYLLLSSLKEVIVCHAITDGLDFSPYVDQVLPHMFTHCTSEEEGVRNMVAECLGALTCMHPYRLLPELVKLPGYDV----CDVCLVWTLATSLKYCMAGKAPVEALSPYMEGFLVMLHDEDLDVKKAALLMVNAAVHHQPFLVSELLPKMVIPALYQTIGLKLERIVDLGPFKHKA 561
YLP IL + ++ +H YLLLS+LKEVI+ HA T GLDF PY++QVLPH+ HC S EEGVRNMVAECLGAL MHP ++P L L G + + WT+A+SLKYCM G+AP L +M FL ML+DEDL V+ AAL M NAAVHHQP L+ L +IP LY+T+ LK ER+VDLGPFK K
Sbjct: 100 YLPVILESLNAN-RHHYLLLSALKEVILLHANTTGLDFGPYIEQVLPHLLKHCESAEEGVRNMVAECLGALITMHPEVIVPALTNLGGGNEGGAPAGSLMRWTIASSLKYCMTGRAPHAILMEHMANFLEMLNDEDLQVRHAALSMCNAAVHHQPNLIISFLDSKIIPVLYETVRLKQERVVDLGPFKQKV 289
BLAST of mRNA_H-elongata_contig67814.14395.1 vs. uniprot
Match: A0A836CDP2_9STRA (Armadillo-type protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDP2_9STRA) HSP 1 Score: 216 bits (550), Expect = 1.660e-63 Identity = 114/216 (52.78%), Postives = 146/216 (67.59%), Query Frame = 1
Query: 1 YLPGILNAFVSSVKHQYLLLSSLKEVIVCHA-ITDGLDFSPYVDQVLPHMFTHCTSEEEGVRNMVAECLGALTCMHPYRLLPELVKL----PGYDVCDVCLVWTLATSLKYCMAGKAPVEALSPYMEGFLVMLHDEDLDVKKAALLMVNAAVHHQPFLVSELLPKMVIPALYQTIG------------------------LKLERIVDLGPFKHKA 561
YLP +L+A + S +HQYLLLSSLKEVIVCHA LDFS +DQVLPH+F HC S EEGVRNMVA CLGAL MHP R++P L++ G ++ D WT+AT+LK+CMAG AP+ ALSP+M FL +L+D DLDV++ ALL+ NAA+HHQP LV +LL +++ P L +T+G LK+ER+VDLGPFKH+
Sbjct: 261 YLPVVLDA-LESTRHQYLLLSSLKEVIVCHARARPPLDFSAALDQVLPHLFGHCQSPEEGVRNMVAACLGALATMHPDRVVPALLEALANAGGEELSDALARWTVATALKHCMAGDAPIAALSPHMRTFLALLNDPDLDVRRGALLLANAAIHHQPALVEDLLAEVITPVLLETVGGALVAACRVRFAXXXXXXXXXXVELKMERVVDLGPFKHRV 475
BLAST of mRNA_H-elongata_contig67814.14395.1 vs. uniprot
Match: A0A7S2UZY3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZY3_9STRA) HSP 1 Score: 202 bits (513), Expect = 5.250e-63 Identity = 105/176 (59.66%), Postives = 131/176 (74.43%), Query Frame = 1
Query: 40 KHQYLLLSSLKEVIVCHAITDGLDFSPYVDQVLPHMFTHCTSEEEGVRNMVAECLGALTCMHPYRLLPELVKLPGYDVCDVCLVWTLATSLKYCMAG-KAPVEALSPYMEGFLVMLHD-EDLDVKKAALLMVNAAVHHQPFLVSELLPKMVIPALYQTIGLKLERIVDLGPFKHKA 561
+ QYLLL++LKEVI+ HA T GLDFS YV+ VLPH++ HC S EEGVRNMVAECLGALT MHP +L+ LVKL D ++ L WTL T+LK+C++ +APV L P+ME F L D EDL+ ++A LL+ A HHQP LV +LLP +V+PAL+ TI L LER+VDLGPFKHK
Sbjct: 5 RQQYLLLAALKEVIMYHACTAGLDFSLYVEMVLPHLYRHCESPEEGVRNMVAECLGALTSMHPEQLVSGLVKLMEDDANNL-LRWTLITALKHCVSHQRAPVSHLLPHMEKFFQALQDSEDLEARRACLLLATACAHHQPSLVCDLLPPLVVPALFATIDLHLERVVDLGPFKHKV 179
BLAST of mRNA_H-elongata_contig67814.14395.1 vs. uniprot
Match: A0A7S2FNG9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FNG9_9STRA) HSP 1 Score: 187 bits (475), Expect = 1.940e-51 Identity = 100/186 (53.76%), Postives = 122/186 (65.59%), Query Frame = 1
Query: 4 LPGILNAFVSSVKHQYLLLSSLKEVIVCHAITDGLDFSPYVDQVLPHMFTHCTSEEEGVRNMVAECLGALTCMHPYRLLPELVKLPGYDVCDVCLVWTLATSLKYCMAGKAPVEALSPYMEGFLVMLHDEDLDVKKAALLMVNAAVHHQPFLVSELLPKMVIPALYQTIGLKLERIVDLGPFKHKA 561
LP IL S +H YLLLS+LKEV+V HA T DF Y+DQV+PH+ H S EEGVRNMVAECLGAL MH ++P L L D + WT+A+SLKY M G P L+ ++ FLVMLHD DL V+ +AL M NAAVHHQP L+S L +IP LY+T L ++R+VDLGPFK K
Sbjct: 897 LPLILTYMARS-RHHYLLLSALKEVLVLHATTSQ-DFGSYIDQVIPHLLKHGQSPEEGVRNMVAECLGALITMHADSIVPMLSGLGSGDQSSPLMQWTIASSLKYSMVGGVPHAILAQHLPQFLVMLHDADLSVRHSALQMCNAAVHHQPSLISPFLKPTIIPVLYETTRLVVKRVVDLGPFKQKV 1080
BLAST of mRNA_H-elongata_contig67814.14395.1 vs. uniprot
Match: A0A7S2QZD8_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2QZD8_9STRA) HSP 1 Score: 177 bits (449), Expect = 9.850e-51 Identity = 90/205 (43.90%), Postives = 130/205 (63.41%), Query Frame = 1
Query: 1 YLPGILNAFVS-SVKHQYLLLSSLKEVIVCHAITDGLDFSPYVDQVLPHMFTHCTSEEEGVRNMVAECLGALTCMHPYRLLPELVKLPGYDVC-----------------DVCLVWTLATSLKYCMAGKAPVEALSPYMEGFLVMLHDEDLDVKKAALLMVNAAVHHQPFLVSELLPKMVIPALYQTIGLKLERIVDLGPFKHKA 561
+LP IL A S K QYLLLS+L+E+I CH + G D + + +LPH+ THC +EEGVR MVAECLG+L C+ P +LP L L ++ D + WT+A S+K+ +AG+A E LSP+M FL +L +++L+VK +ALLMV +AVHH P L++ L+ +++ P LY+ + L+R+VD+GPFKHK
Sbjct: 53 FLPAILGALEDKSQKDQYLLLSALRELIHCHQLGGGSDIAASIPLILPHLITHCGDKEEGVRTMVAECLGSLVCLQPDVVLPSLQDLVSNNINKSKGSEEKNDNVDGFSHDALICWTVANSIKFAIAGRANTEKLSPFMPKFLELLKEDNLNVKNSALLMVYSAVHHTPQLLAGLMQELISPCLYELAQMNLQRVVDMGPFKHKV 257
BLAST of mRNA_H-elongata_contig67814.14395.1 vs. uniprot
Match: A0A7S2XTJ0_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XTJ0_9STRA) HSP 1 Score: 184 bits (466), Expect = 2.840e-50 Identity = 95/195 (48.72%), Postives = 130/195 (66.67%), Query Frame = 1
Query: 1 YLPGILNAFV-SSVKHQYLLLSSLKEVIVCHAITDGLDFSPYVDQVLPHMFTHCTSEEEGVRNMVAECLGALTCMHPYRLLPELVKL---------PGYDVCDVCLVWTLATSLKYCMAGKAPVEALSPYMEGFLVMLHDEDLDVKKAALLMVNAAVHHQPFLVSELLPKMVIPALYQTIGLKLERIVDLGPFKH 555
+LP IL A +S K QYLLLS+L+E+I CH + DG D S V ++LPH+ H + +EEGVR M AECLG+L C+HP + P L L G D + WT+ATS+K+ +AG+A + LS YM FLV+L ++DL VK AALLMV +AVHH P +++ LL + ++P+LY+ L L+R+VDLGPFKH
Sbjct: 691 FLPAILTALEQNSEKKQYLLLSALRELIHCHQLGDGGDISSSVPEILPHLIKHASDKEEGVRTMSAECLGSLACLHPSVVFPTLRDLVVKHGSTSTSGDAEDDALVCWTVATSIKFAIAGRADAKVLSEYMPSFLVLLQNDDLSVKNAALLMVYSAVHHTPAVIAGLLQEHILPSLYELAVLNLKRVVDLGPFKH 885
BLAST of mRNA_H-elongata_contig67814.14395.1 vs. uniprot
Match: A0A7R9VF31_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VF31_9STRA) HSP 1 Score: 177 bits (449), Expect = 2.720e-49 Identity = 95/209 (45.45%), Postives = 132/209 (63.16%), Query Frame = 1
Query: 1 YLPGILNAFVSS-VKHQYLLLSSLKEVIVCHAI------TDGLDFSPYVDQVLPHMFTHCTSEEEGVRNMVAECLGALTCMHPYRLLPELVKL----------------PGYDVC-DVCLVWTLATSLKYCMAGKAPVEALSPYMEGFLVMLHDEDLDVKKAALLMVNAAVHHQPFLVSELLPKMVIPALYQTIGLKLERIVDLGPFKH 555
+LP IL+A + K QYLLLS+L+E+I CH + D SP + +LPH+F HC EEEGVR MVAECLG+LTC+ P +LP+L L P + D + WT+AT++K+ +AG+A LSP+M FLV+L ++DL VK A LLMV +AVHH P LV+ L+ + ++P+L++ L L+R+VDLGPFKH
Sbjct: 221 FLPAILDALEENREKKQYLLLSALRELIHCHQLGGXXXXXSAADISPSIPLILPHLFKHCADEEEGVRTMVAECLGSLTCLQPAVILPQLKDLVEKHSGKNAPQATEEEPSEEAKKDALVCWTVATAVKFAIAGRADPSQLSPFMPSFLVLLREDDLSVKTAGLLMVYSAVHHSPQLVAGLMQEHILPSLHELAILNLKRVVDLGPFKH 429
BLAST of mRNA_H-elongata_contig67814.14395.1 vs. uniprot
Match: B8C5W6_THAPS (TIP120 domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C5W6_THAPS) HSP 1 Score: 172 bits (436), Expect = 3.400e-46 Identity = 91/187 (48.66%), Postives = 123/187 (65.78%), Query Frame = 1
Query: 1 YLPGILNAFV-SSVKHQYLLLSSLKEVIVCHAITDGLDFSPYVDQVLPHMFTHCTSEEEGVRNMVAECLGALTCMHPYRLLPELVKLPGYDVCDVCLV-WTLATSLKYCMAGKAPVEALSPYMEGFLVMLHDEDLDVKKAALLMVNAAVHHQPFLVSELLPKMVIPALYQTIGLKLERIVDLGPFKH 555
+LP IL A SS K QYLLLSSL+E I C+ +G D S V +LPH+ T+C ++EEGVR MVAECLG+L C+ P +LP L KL D LV WT+ ++K+ + G+ ++P+M FL++L ++DL VK ALLMV +AVHH P LV+ L+ ++P +Y+ L LER VDLGPFKH
Sbjct: 956 FLPSILTALEESSGKKQYLLLSSLREFIHCYREVEGSDLSSSVPLILPHLETNCENDEEGVRTMVAECLGSLACLEPKTILPVLEKLTTKDTKKKVLVRWTVGNAVKFAIGGRISPADIAPFMPTFLLLLQEDDLAVKNVALLMVYSAVHHTPQLVAGLMKDQILPNIYELAQLNLERKVDLGPFKH 1142
BLAST of mRNA_H-elongata_contig67814.14395.1 vs. uniprot
Match: A0A7S4R363_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R363_9STRA) HSP 1 Score: 166 bits (420), Expect = 4.700e-44 Identity = 92/202 (45.54%), Postives = 130/202 (64.36%), Query Frame = 1
Query: 1 YLPGILNAFV-SSVKHQYLLLSSLKEVIVCHAI---TDGLDFSPYVDQVLPHMFTHCTSEEEGVRNMVAECLGALTCMHPYRLLPELVKLP----GYDVCD---------VCLVWTLATSLKYCMAGKAPVEALSPYMEGFLVMLHDEDLDVKKAALLMVNAAVHHQPFLVSELLPKMVIPALYQTIGLKLERIVDLGPFKH 555
+LP ILNA +S K QYLLLS+L+E+I C+ DG D S V +LPH+ +HC+ +EEGVR MVAEC+G+LTC+ P +LP L +L G DV D WT+AT++K+ +A A L+ +M FL +L + DL V+ AALLMV ++VHH P LV+ L+ + ++P+L++ L L+R+VDLGPFKH
Sbjct: 878 FLPAILNALEQNSQKKQYLLLSALRELIHCYQTGGGADGGDISSSVPLILPHLVSHCSDKEEGVRTMVAECMGSLTCLEPGVMLPHLQELVATHGGKDVDDNEEGGGRKDALSCWTVATAIKFAIAAHADPSKLAGFMPSFLRLLSERDLSVRNAALLMVYSSVHHTPQLVAGLMQEHILPSLHELAQLNLKRVVDLGPFKH 1079 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig67814.14395.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig67814.14395.1 >prot_H-elongata_contig67814.14395.1 ID=prot_H-elongata_contig67814.14395.1|Name=mRNA_H-elongata_contig67814.14395.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=194bp YLPGILNAFVSSVKHQYLLLSSLKEVIVCHAITDGLDFSPYVDQVLPHMFback to top mRNA from alignment at H-elongata_contig67814:120..2785- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig67814.14395.1 ID=mRNA_H-elongata_contig67814.14395.1|Name=mRNA_H-elongata_contig67814.14395.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2666bp|location=Sequence derived from alignment at H-elongata_contig67814:120..2785- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig67814:120..2785- >mRNA_H-elongata_contig67814.14395.1 ID=mRNA_H-elongata_contig67814.14395.1|Name=mRNA_H-elongata_contig67814.14395.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1164bp|location=Sequence derived from alignment at H-elongata_contig67814:120..2785- (Himanthalia elongata Himel1 dioecious)back to top |