mRNA_H-elongata_contig6708.14317.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig6708.14317.1
Unique NamemRNA_H-elongata_contig6708.14317.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
[Close]
BLAST of mRNA_H-elongata_contig6708.14317.1 vs. uniprot
Match: D8LM46_ECTSI (DNA-directed RNA polymerases I, II, and III subunit RPABC3 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM46_ECTSI)

HSP 1 Score: 207 bits (526), Expect = 1.380e-62
Identity = 94/120 (78.33%), Postives = 113/120 (94.17%), Query Frame = 1 
Query:   19 VNRLECKGLTYDVNVLLDTNCDIYPVKRGDRLTFVLASTLDLNGKPDDGTYKQQGDEITLADKYEYVMHGRVFKCEHRKDERVELFVSFGGLLLRLTGDQRHVANIEVDSRVYCLLRQNA 378
            VNRLECKG+TYD+++LLDTNCDIYPVK G+RLTFV+ASTLDL+GKPDDGTYK  GDE++LADKYEYVMHGRV++ + +KD +V++F SFGGLL+RLTGDQRHVANIEVDSRV+CLLR+NA
Sbjct:   25 VNRLECKGVTYDMDLLLDTNCDIYPVKEGERLTFVIASTLDLSGKPDDGTYKPLGDEVSLADKYEYVMHGRVYRFDQQKDTKVQVFASFGGLLMRLTGDQRHVANIEVDSRVFCLLRRNA 144
[Close]
BLAST of mRNA_H-elongata_contig6708.14317.1 vs. uniprot
Match: A0A836CD84_9STRA (DNA-directed RNA polymerases I, II, and III subunit RPABC3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD84_9STRA)

HSP 1 Score: 145 bits (365), Expect = 1.430e-38
Identity = 67/119 (56.30%), Postives = 92/119 (77.31%), Query Frame = 1 
Query:   19 VNRLECKGLTYDVNVLLDTNCDIYPVKRGDRLTFVLASTLDLNGKPDDGTYKQQGDEITLADKYEYVMHGRVFKCEHRKDERVELFVSFGGLLLRLTGDQRHVANIEVDSRVYCLLRQN 375
            VNRL CK +T+++++LLD N +IY V++ D+L+ VL+STL L+G PDDGTY+    E TLA +YEYVMHGRVFK E     +V++  SFGGLL+RLTG+QRH+ +I +D R+Y L+RQN
Sbjct:   27 VNRLACKAVTFEMDLLLDINSEIYTVRQNDKLSLVLSSTLALDGAPDDGTYRPIEHEETLASRYEYVMHGRVFKYEQLTGTQVQVSASFGGLLMRLTGEQRHLVHISIDQRIYLLIRQN 145
[Close]
BLAST of mRNA_H-elongata_contig6708.14317.1 vs. uniprot
Match: A0A7S1BC37_9STRA (DNA-directed RNA polymerases I, II, and III subunit RPABC3 n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BC37_9STRA)

HSP 1 Score: 140 bits (352), Expect = 1.030e-36
Identity = 63/121 (52.07%), Postives = 91/121 (75.21%), Query Frame = 1 
Query:   13 SAVNRLECKGLTYDVNVLLDTNCDIYPVKRGDRLTFVLASTLDLNGKPDDGTYKQQGDEITLADKYEYVMHGRVFKCEHRKDERVELFVSFGGLLLRLTGDQRHVANIEVDSRVYCLLRQN 375
            S +NR++  G T+  ++LLDTN +IYP+   +++T VL+STL L+G+PDDG Y Q G E T+AD YEYVMHGRVF  +++ D  + + VSFGGLL+RLTGDQRH+ N+  D R+Y L++++
Sbjct:   25 SRINRIQATGTTFQCDLLLDTNSEIYPIAEEEKITIVLSSTLSLDGRPDDGEYDQSG-EPTMADNYEYVMHGRVFDIKYKGDGVIAVHVSFGGLLMRLTGDQRHLENVRADERLYILIKKD 144
[Close]
BLAST of mRNA_H-elongata_contig6708.14317.1 vs. uniprot
Match: A0A7S2BWL1_9STRA (DNA-directed RNA polymerases I, II, and III subunit RPABC3 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BWL1_9STRA)

HSP 1 Score: 136 bits (342), Expect = 3.020e-35
Identity = 56/118 (47.46%), Postives = 88/118 (74.58%), Query Frame = 1 
Query:   19 VNRLECKGLTYDVNVLLDTNCDIYPVKRGDRLTFVLASTLDLNGKPDDGTYKQQGDEITLADKYEYVMHGRVFKCEHRKDERVELFVSFGGLLLRLTGDQRHVANIEVDSRVYCLLRQ 372
            ++RL  +  T+++ +L+D N +++PV   D+++F LA+TL LNG PDDGTY+Q     +L D+YEY MHG+V+   H++ E +E+ VSFGGLL+RL+GDQRH+  IE+D  +YCL+++
Sbjct:   26 IDRLAARAETFEMELLIDINAEVWPVAANDKISFALATTLSLNGDPDDGTYQQYEKGASLLDRYEYAMHGKVYNFNHKEGENIEIDVSFGGLLMRLSGDQRHLVGIELDQSIYCLMKK 143
[Close]
BLAST of mRNA_H-elongata_contig6708.14317.1 vs. uniprot
Match: A0A7S2U8S9_9STRA (DNA-directed RNA polymerases I, II, and III subunit RPABC3 n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U8S9_9STRA)

HSP 1 Score: 133 bits (335), Expect = 3.600e-34
Identity = 64/120 (53.33%), Postives = 88/120 (73.33%), Query Frame = 1 
Query:   19 VNRLECKGLTYDVNVLLDTNCDIYPVKRGDRLTFVLASTLDLNGKPDDG-TYKQQGDEITLADKYEYVMHGRVFKCEHRKDERVELFVSFGGLLLRLTGDQRHVANIEVDSRVYCLLRQN 375
            VNRL   G T++ ++LLD NC+IY V  GD++T VLASTL L+G PDD  +++    E TLAD Y+YVMHGR+F   ++KD  V +  SFGGLL+RLTGDQRH++N+  D R+Y LL+++
Sbjct:   29 VNRLAATGTTFECDLLLDINCEIYKVLEGDKMTLVLASTLSLDGSPDDHFSFQPNSTEPTLADNYDYVMHGRIFDVGYKKDGVVVIAASFGGLLMRLTGDQRHLSNVMPDMRLYVLLKKD 148
[Close]
BLAST of mRNA_H-elongata_contig6708.14317.1 vs. uniprot
Match: A0A7S2R5B9_9STRA (DNA-directed RNA polymerases I, II, and III subunit RPABC3 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R5B9_9STRA)

HSP 1 Score: 133 bits (334), Expect = 4.600e-34
Identity = 60/118 (50.85%), Postives = 87/118 (73.73%), Query Frame = 1 
Query:   19 VNRLECKGLTYDVNVLLDTNCDIYPVKRGDRLTFVLASTLDLNGKPDDGTYKQQGDEITLADKYEYVMHGRVFKCEHRKDERVELFVSFGGLLLRLTGDQRHVANIEVDSRVYCLLRQ 372
            +NRL  K  TY++ +L+D NC+++ V   D+++F LAS+L ++G  DDGTY Q  D  +L D+YEY MHGRV+   H+KD+ +E+ VSFGGLLLRLTGD RH+ +IE+D  +YCL+ +
Sbjct:   26 INRLMAKAETYNMELLVDVNCELWQVNEHDKISFALASSLAIDGTADDGTYNQD-DGPSLLDQYEYAMHGRVYGFNHKKDDVIEIDVSFGGLLLRLTGDARHLTSIELDQNIYCLMNK 142
[Close]
BLAST of mRNA_H-elongata_contig6708.14317.1 vs. uniprot
Match: A0A1E7FPE4_9STRA (DNA-directed RNA polymerases I, II, and III subunit RPABC3 n=3 Tax=Bacillariaceae TaxID=33852 RepID=A0A1E7FPE4_9STRA)

HSP 1 Score: 131 bits (330), Expect = 1.880e-33
Identity = 63/119 (52.94%), Postives = 85/119 (71.43%), Query Frame = 1 
Query:   19 VNRLECKGLTYDVNVLLDTNCDIYPVKRGDRLTFVLASTLDLNGKPDDGTYKQQGDEITLADKYEYVMHGRVFKCEHRKDERVELFVSFGGLLLRLTGDQRHVANIEVDSRVYCLLRQN 375
            VNR++  G T++ ++LLD NC+IY ++  D++T VLASTL L+G P D        E TLAD YEYVMHGRVF   ++KD    L +SFGGLL+RLTGDQRH+AN+  D R+Y LL+++
Sbjct:   29 VNRIQAVGTTFECDLLLDINCEIYNLREADKVTLVLASTLHLDGSPADHLSYSPSTEPTLADNYEYVMHGRVFDISYKKDGTAVLALSFGGLLMRLTGDQRHLANVLPDMRLYLLLKKD 147
[Close]
BLAST of mRNA_H-elongata_contig6708.14317.1 vs. uniprot
Match: A0A7S0CGW6_9STRA (DNA-directed RNA polymerases I, II, and III subunit RPABC3 n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CGW6_9STRA)

HSP 1 Score: 130 bits (326), Expect = 7.860e-33
Identity = 61/119 (51.26%), Postives = 86/119 (72.27%), Query Frame = 1 
Query:   19 VNRLECKGLTYDVNVLLDTNCDIYPVKRGDRLTFVLASTLDLNGKPDDGTYKQQGDEITLADKYEYVMHGRVFKCEHRKDERVELFVSFGGLLLRLTGDQRHVANIEVDSRVYCLLRQN 375
            VNRL   G T++ ++LLD NC+IY ++  DR+T VLA TL+L+G PDD        E +LAD YEYVMHGRVF+  ++KD  + +  SFGGLL+RLTGDQRH++ I+ D R+Y L++++
Sbjct:   32 VNRLAATGTTFECDLLLDINCEIYSIQESDRITVVLAGTLNLDGTPDDHFSYTGQSEPSLADNYEYVMHGRVFEILYQKDGMISIHASFGGLLMRLTGDQRHLSAIQPDMRLYILIKKD 150
[Close]
BLAST of mRNA_H-elongata_contig6708.14317.1 vs. uniprot
Match: B8CGC8_THAPS (DNA-directed RNA polymerases I, II, and III subunit RPABC3 n=2 Tax=Thalassiosirales TaxID=33847 RepID=B8CGC8_THAPS)

HSP 1 Score: 130 bits (326), Expect = 8.590e-33
Identity = 63/123 (51.22%), Postives = 88/123 (71.54%), Query Frame = 1 
Query:   19 VNRLECKGLTYDVNVLLDTNCDIYPVKRGDRLTFVLASTLDLNGKPDDGTY----KQQGDEITLADKYEYVMHGRVFKCEHRKDERVELFVSFGGLLLRLTGDQRHVANIEVDSRVYCLLRQN 375
            VNRL   G T++ ++LLD NC IY +  G+++T VLASTL+L+G PDD T         +E+TLAD YEYVMHGRVF   ++KD  V + +SFGGLL RLTGDQRH++++  D R+Y L++++
Sbjct:   31 VNRLSATGTTFECDLLLDYNCQIYSLLEGEKMTLVLASTLNLDGTPDDHTSYNPATSHNNELTLADNYEYVMHGRVFDVSYKKDGVVVIAISFGGLLCRLTGDQRHLSSVLPDMRLYVLIKKD 153
[Close]
BLAST of mRNA_H-elongata_contig6708.14317.1 vs. uniprot
Match: K0RE90_THAOC (DNA-directed RNA polymerases I, II, and III subunit RPABC3 n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RE90_THAOC)

HSP 1 Score: 129 bits (325), Expect = 1.130e-32
Identity = 65/123 (52.85%), Postives = 87/123 (70.73%), Query Frame = 1 
Query:   19 VNRLECKGLTYDVNVLLDTNCDIYPVKRGDRLTFVLASTLDLNGKPDDGTYKQQG----DEITLADKYEYVMHGRVFKCEHRKDERVELFVSFGGLLLRLTGDQRHVANIEVDSRVYCLLRQN 375
            VNRL  KG T+D ++LLD NC IY +   +++T VLASTL+L+G PDD T         +E TLAD YEYVMHGRVF   ++KD  V + +SFGGLL RLTGDQRH++NI  D R++ L++++
Sbjct:   29 VNRLSAKGTTFDCDLLLDYNCQIYSLHEEEKMTLVLASTLNLDGSPDDHTSYNPAASFKNEPTLADNYEYVMHGRVFDVSYKKDGVVVIAISFGGLLCRLTGDQRHLSNILPDMRLFILIKKD 151
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6708.14317.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LM46_ECTSI1.380e-6278.33DNA-directed RNA polymerases I, II, and III subuni... [more]
A0A836CD84_9STRA1.430e-3856.30DNA-directed RNA polymerases I, II, and III subuni... [more]
A0A7S1BC37_9STRA1.030e-3652.07DNA-directed RNA polymerases I, II, and III subuni... [more]
A0A7S2BWL1_9STRA3.020e-3547.46DNA-directed RNA polymerases I, II, and III subuni... [more]
A0A7S2U8S9_9STRA3.600e-3453.33DNA-directed RNA polymerases I, II, and III subuni... [more]
A0A7S2R5B9_9STRA4.600e-3450.85DNA-directed RNA polymerases I, II, and III subuni... [more]
A0A1E7FPE4_9STRA1.880e-3352.94DNA-directed RNA polymerases I, II, and III subuni... [more]
A0A7S0CGW6_9STRA7.860e-3351.26DNA-directed RNA polymerases I, II, and III subuni... [more]
B8CGC8_THAPS8.590e-3351.22DNA-directed RNA polymerases I, II, and III subuni... [more]
K0RE90_THAOC1.130e-3252.85DNA-directed RNA polymerases I, II, and III subuni... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig6708contigH-elongata_contig6708:7587..9873 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score211.5
Seed ortholog evalue2.4e-52
Seed eggNOG ortholog2880.D8LM46
Preferred nameRPB8
KEGG rclassRC02795
KEGG koko:K03016
KEGG ReactionR00435,R00441,R00442,R00443
KEGG Pathwayko00230,ko00240,ko01100,ko03020,ko04623,ko05016,ko05169,map00230,map00240,map01100,map03020,map04623,map05016,map05169
KEGG ModuleM00180,M00181,M00182
GOsGO:0000375,GO:0000377,GO:0000398,GO:0000418,GO:0000419,GO:0000428,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0003899,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005665,GO:0005666,GO:0005730,GO:0005736,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006283,GO:0006289,GO:0006351,GO:0006352,GO:0006353,GO:0006354,GO:0006360,GO:0006361,GO:0006363,GO:0006366,GO:0006367,GO:0006368,GO:0006370,GO:0006383,GO:0006396,GO:0006397,GO:0006399,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0008150,GO:0008152,GO:0008380,GO:0008543,GO:0009058,GO:0009059,GO:0009301,GO:0009304,GO:0009452,GO:0009719,GO:0009893,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0010604,GO:0010628,GO:0016070,GO:0016071,GO:0016073,GO:0016591,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019222,GO:0019438,GO:0023052,GO:0030880,GO:0031974,GO:0031981,GO:0032774,GO:0032991,GO:0032993,GO:0033554,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0036260,GO:0040029,GO:0042221,GO:0042795,GO:0042797,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044344,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044452,GO:0044464,GO:0045815,GO:0046483,GO:0048518,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055029,GO:0060147,GO:0060255,GO:0060964,GO:0060966,GO:0060968,GO:0061695,GO:0065007,GO:0070013,GO:0070848,GO:0070887,GO:0071310,GO:0071363,GO:0071495,GO:0071704,GO:0071774,GO:0090304,GO:0097159,GO:0097659,GO:0097747,GO:0098781,GO:0140098,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902494,GO:1990234
EggNOG free text desc.transcription by RNA polymerase I
EggNOG OGsKOG3400@1,KOG3400@2759
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01611,ko00000,ko00001,ko00002,ko03021,ko03400
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionNucleic acid-binding, OB-fold
Ec32 orthologEc-06_002430.1
Exons4
Model size1209
Cds size381
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig6708.14317.1prot_H-elongata_contig6708.14317.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig6708 8415..9873 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931061.550453-UTR-H-elongata_contig6708:7586..84141622931061.550453-UTR-H-elongata_contig6708:7586..8414Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6708 7587..8414 -
1691679681.9446497-UTR-H-elongata_contig6708:7586..84141691679681.9446497-UTR-H-elongata_contig6708:7586..8414Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6708 7587..8414 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931061.5648165-CDS-H-elongata_contig6708:8414..85251622931061.5648165-CDS-H-elongata_contig6708:8414..8525Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6708 8415..8525 -
1691679681.9578388-CDS-H-elongata_contig6708:8414..85251691679681.9578388-CDS-H-elongata_contig6708:8414..8525Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6708 8415..8525 -
1622931061.5789635-CDS-H-elongata_contig6708:8872..89531622931061.5789635-CDS-H-elongata_contig6708:8872..8953Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6708 8873..8953 -
1691679681.9677808-CDS-H-elongata_contig6708:8872..89531691679681.9677808-CDS-H-elongata_contig6708:8872..8953Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6708 8873..8953 -
1622931061.5935721-CDS-H-elongata_contig6708:9302..94211622931061.5935721-CDS-H-elongata_contig6708:9302..9421Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6708 9303..9421 -
1691679681.9780467-CDS-H-elongata_contig6708:9302..94211691679681.9780467-CDS-H-elongata_contig6708:9302..9421Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6708 9303..9421 -
1622931061.6059933-CDS-H-elongata_contig6708:9803..98731622931061.6059933-CDS-H-elongata_contig6708:9803..9873Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6708 9804..9873 -
1691679681.9878433-CDS-H-elongata_contig6708:9803..98731691679681.9878433-CDS-H-elongata_contig6708:9803..9873Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6708 9804..9873 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig6708.14317.1

>prot_H-elongata_contig6708.14317.1 ID=prot_H-elongata_contig6708.14317.1|Name=mRNA_H-elongata_contig6708.14317.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=127bp
MPLVSAVNRLECKGLTYDVNVLLDTNCDIYPVKRGDRLTFVLASTLDLNG
KPDDGTYKQQGDEITLADKYEYVMHGRVFKCEHRKDERVELFVSFGGLLL
RLTGDQRHVANIEVDSRVYCLLRQNA*
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mRNA from alignment at H-elongata_contig6708:7587..9873-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig6708.14317.1 ID=mRNA_H-elongata_contig6708.14317.1|Name=mRNA_H-elongata_contig6708.14317.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2287bp|location=Sequence derived from alignment at H-elongata_contig6708:7587..9873- (Himanthalia elongata Himel1 dioecious)
ATGCCGTTGGTCTCGGCAGTCAACCGGCTGGAGTGCAAGGGGTTAACGTA
CGATGTGAACGTGCTGCTCGGTGAGTGAGTGACGCATGCTTCGACCAGTT
TGCATTCCCCGTGGAGGCCGCTTTTTGCTCCAGGGAATGCTATGGTAGTC
GTGAAAAATATATGCAAGGGTAAGTGCTTAGTACAGTAGAAACGGCATCC
TCAGCGCTTGCCAACACTGAAGGCACGTTTCTTTGGACGAGGCACGAGGA
TTAGCGTGCCTTTTTTGCAGACGCCTAGTAGCTCTACAACAAAGGAGTGC
CAATGACCCCCTTCTTTGTATATAAACACATAGGTGACGGGGGATCGAGG
CTTGACAATGAGAGATTTGGAGTGATGCAAAAACGCATAAAATCTCGCTT
ATGATGATCCGCGACCGATCTGCGCCCCATGTTGCGCCGACCCCTCGTGA
AGACACGAACTGCGATATCTACCCAGTGAAGCGAGGGGACCGGTTAACGT
TCGTGCTCGCTAGTACCCTCGACCTCAATGGAAAGCCAGACGACGGCACT
TACAAGCAGCAGGGTGACGAGGTGAAGATCATTCACGGTAATCTTCGATA
TGGCCAGGCGGTCGCGCCTTCAACAGGAATGTCGCTTTGTGACTGTTCCC
AGGCTTTTCGGATCGGGCAACGTTGCGCTGTACTTCGAGCCGTCTTTGAG
GCCAATGCGTTCACAATACCCCCCCCGCCATCCCTCCTGTGAAACAATGA
CCCAAGATACCAGACACTGAAATCGCTGCGGCACCATCGAACGGATATTT
TTGCGAACCAGCTCGCGCGTGCGCTTTGTTTGTACCTGAAAGTTGACAAC
CGTTGCTGTAGATGTTCGCGCTCGCTGACCTCACATTACTTTATTTTCTA
CCGATCGGTCGTTCGAAAAGATCACACTCGCAGACAAGTACGAGTACGTC
ATGCACGGTCGCGTGTTCAAATGCGAGCACAGGAAGGATGAAAGAGTGGA
GGTGAGGAATCGCTCCTTGGAAATACGTGCCACTTTTTATCTTAGCGTGC
TATAAGCATGATCTCTCGGCGTCGCGTCGACTAGAAAGCGTGGGCGGTGT
CTTAAGGCCGCCGGCGCTCGACCCAGGTCATTGCCATAATCTGGAGAGCG
CCGTCTCTCGTCGCCTTCGTCCGTCTGGTAGGTTCTTGTTCATCCCTTGT
GCGATCACTCAGCAATCTATTGCATTCCACGTGGGCGTTCTAATGTTTTC
AATATTTTGGTGCCGCTGTTCCCGTCGATCCCGGCCTTTCTTCTCCCTTG
GTTGTTTTCTTCTTTTTATCTTACCTGGTAACGGTACGTGCGATAAAGCT
GTTCGTGTCGTTCGGAGGACTTCTTTTGCGCCTGACCGGTGACCAGCGAC
ACGTGGCTAACATCGAGGTCGACTCGCGGGTTTATTGTCTCCTCCGGCAG
AACGCATGAGCGTGGGTCTTCAGTCGTGGGTGGGAGATCAATAATACCCT
CGCAAAGAGTCATGGGGCAGGTGAATCCGACCTGTCGAGGGCCTTCCCTC
CTGTGCGTGCGGGCCCGCGAGCGCCTCCCCGCTAATGTCAGTACTCTAGG
TTAGACCATGATTGAACCGTGACAGGGATCGACCAAGCGCGTCTGTCGAA
GAGCGATGATGCGTGCAAAATTTGAAGATCGACTCTTTGATAACGATGAT
CATGCGTGGTGAGCTACGGGTTAAATCGCGGTACCTACGTGGATGGCAGT
AGAGATGCAGGAAAAGCAGTAGCCATGGTAAGGTGTTCAGTTTGCAGCAA
GGCCTCGGCATAGGCTGTTAAGGGAAAAAATGACTCCTGGGATGCCTTGT
TTTATAATATGCTTAAAAATAGTTTTAAAGTACGCAGAGTAACGCAAAGC
TTTGACCGCGGAAGATGGACGACCTCGAACAGCGTTGGTGATACATGGCG
CCGAAGATCCCGTTCTAGACGCTACTCTCGCTGGTTTGATCGGTTGTTTT
CTCCCCTAAGGAGGTAAAAGCATGCTGGTTCTGGTGGGCACTCGTTGGCG
TTGACAAAATATCGTCCCTCTTGTGGCGATTCCTCGATAGATTCCGGTGA
TCATATTCGCCGTTGGTGTTGCAGACACGCCATAATTCTTGCAATTCCGC
CAGGTTTCCTGTAAAGAAAGCGGCAGCCGAAGTCAGCAGGATAAACGCGT
TTTTGTCTACGTTGTGCGACAGAATGGCACGCCCGAGCTGTCCCACACAC
TCCTCTCGCCTGAAGAAAACGCCTCGGGGTTATCACA
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Coding sequence (CDS) from alignment at H-elongata_contig6708:7587..9873-

>mRNA_H-elongata_contig6708.14317.1 ID=mRNA_H-elongata_contig6708.14317.1|Name=mRNA_H-elongata_contig6708.14317.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=762bp|location=Sequence derived from alignment at H-elongata_contig6708:7587..9873- (Himanthalia elongata Himel1 dioecious)
ATGCCGTTGGTCTCGGCAGTCAACCGGCTGGAGTGCAAGGGGTTAACGTA
CGATGTGAACGTGCTGCTCGATGCCGTTGGTCTCGGCAGTCAACCGGCTG
GAGTGCAAGGGGTTAACGTACGATGTGAACGTGCTGCTCGACACGAACTG
CGATATCTACCCAGTGAAGCGAGGGGACCGGTTAACGTTCGTGCTCGCTA
GTACCCTCGACCTCAATGGAAAGCCAGACGACGGCACTTACAAGCAGCAG
GGTGACGAGACACGAACTGCGATATCTACCCAGTGAAGCGAGGGGACCGG
TTAACGTTCGTGCTCGCTAGTACCCTCGACCTCAATGGAAAGCCAGACGA
CGGCACTTACAAGCAGCAGGGTGACGAGATCACACTCGCAGACAAGTACG
AGTACGTCATGCACGGTCGCGTGTTCAAATGCGAGCACAGGAAGGATGAA
AGAGTGGAGATCACACTCGCAGACAAGTACGAGTACGTCATGCACGGTCG
CGTGTTCAAATGCGAGCACAGGAAGGATGAAAGAGTGGAGCTGTTCGTGT
CGTTCGGAGGACTTCTTTTGCGCCTGACCGGTGACCAGCGACACGTGGCT
AACATCGAGGTCGACTCGCGGGTTTATTGTCTCCTCCGGCAGAACGCATG
ACTGTTCGTGTCGTTCGGAGGACTTCTTTTGCGCCTGACCGGTGACCAGC
GACACGTGGCTAACATCGAGGTCGACTCGCGGGTTTATTGTCTCCTCCGG
CAGAACGCATGA
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