mRNA_H-elongata_contig67075.14316.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig67075.14316.1
Unique NamemRNA_H-elongata_contig67075.14316.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig67075.14316.1 vs. uniprot
Match: D8LNX4_ECTSI (ATP-dependent protease peptidase subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNX4_ECTSI)

HSP 1 Score: 173 bits (438), Expect = 1.400e-52
Identity = 91/109 (83.49%), Postives = 99/109 (90.83%), Query Frame = 1 
Query:    1 GQLQNACVALAKDWRTDKYLRRLESVVLVADSKMSLKVTGLGDVLAPNGGVVAVGSGQPYALAAARALWAQNALSAEEVARQAMEIAADLCVYTNANFTVEILDAEEEE 327
            GQL NACVALAKDWRTDKYLRRLE+VVLVADSK SLKVTGLGDVLAPNGGV+AVGSGQPYALAAARAL  Q  LSAEEVAR++MEIA++LCVYTN +FT+  LD EEEE
Sbjct:  101 GQLMNACVALAKDWRTDKYLRRLEAVVLVADSKFSLKVTGLGDVLAPNGGVIAVGSGQPYALAAARALSGQEDLSAEEVARKSMEIASELCVYTNNHFTMHSLDVEEEE 209
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BLAST of mRNA_H-elongata_contig67075.14316.1 vs. uniprot
Match: A0A3M1JZ37_9PROT (ATP-dependent protease subunit HslV n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3M1JZ37_9PROT)

HSP 1 Score: 136 bits (343), Expect = 1.550e-38
Identity = 70/106 (66.04%), Postives = 86/106 (81.13%), Query Frame = 1 
Query:    1 GQLQNACVALAKDWRTDKYLRRLESVVLVADSKMSLKVTGLGDVLAPNGGVVAVGSGQPYALAAARALWAQNALSAEEVARQAMEIAADLCVYTNANFTVEILDAE 318
            GQL  ACV LAKDWRTD+YLRRLE+++ VAD   SL +TG GDVL P+ G++A+GSG  YALAAARAL+ QN L AE +AR+AMEIAAD+CVYTN N T+E+L+ E
Sbjct:   80 GQLVRACVELAKDWRTDRYLRRLEAMMAVADRSTSLMLTGTGDVLEPDDGIIAIGSGGNYALAAARALYDQN-LDAEAIARRAMEIAADICVYTNNNLTIEVLETE 184
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BLAST of mRNA_H-elongata_contig67075.14316.1 vs. uniprot
Match: M2XNT1_GALSU (ATP-dependent HslUV protease, peptidase subunit HslV isoform 1 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XNT1_GALSU)

HSP 1 Score: 137 bits (344), Expect = 3.170e-38
Identity = 66/104 (63.46%), Postives = 88/104 (84.62%), Query Frame = 1 
Query:    1 GQLQNACVALAKDWRTDKYLRRLESVVLVADSKMSLKVTGLGDVLAPNGGVVAVGSGQPYALAAARALWAQNALSAEEVARQAMEIAADLCVYTNANFTVEILD 312
            GQL  ACV+LAKDWRTD+YLRRL++++LV+D+ +SL +TG GDVL P GGVV +GSG P+A+AAAR+L   + LSAEE+A+ +M+IAAD+C+YTNA F VEI+D
Sbjct:  102 GQLLRACVSLAKDWRTDRYLRRLDALLLVSDASISLTLTGNGDVLEPEGGVVGIGSGGPFAVAAARSLLQHSTLSAEEIAKNSMKIAADMCIYTNAEFIVEIID 205
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BLAST of mRNA_H-elongata_contig67075.14316.1 vs. uniprot
Match: A0A1E5Q488_9PROT (ATP-dependent protease subunit HslV n=1 Tax=Magnetovibrio blakemorei TaxID=28181 RepID=A0A1E5Q488_9PROT)

HSP 1 Score: 135 bits (340), Expect = 4.670e-38
Identity = 69/102 (67.65%), Postives = 85/102 (83.33%), Query Frame = 1 
Query:    4 QLQNACVALAKDWRTDKYLRRLESVVLVADSKMSLKVTGLGDVLAPNGGVVAVGSGQPYALAAARALWAQNALSAEEVARQAMEIAADLCVYTNANFTVEIL 309
            QL  ACV LAKDWRTD+YLR+LE+++LVAD  +SL +TG GDVL P+ GV+A+GSG  YALAAAR L  Q+ LSAE+VAR+AMEIAAD+CV+TN NFT+E L
Sbjct:   85 QLTRACVELAKDWRTDRYLRKLEAMMLVADKDVSLVLTGTGDVLEPDDGVIAIGSGGNYALAAARGLAGQDNLSAEQVARRAMEIAADICVFTNTNFTIETL 186
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BLAST of mRNA_H-elongata_contig67075.14316.1 vs. uniprot
Match: A0A285SXX0_9HYPH (ATP-dependent protease subunit HslV n=6 Tax=Stappia TaxID=152161 RepID=A0A285SXX0_9HYPH)

HSP 1 Score: 134 bits (338), Expect = 9.110e-38
Identity = 70/106 (66.04%), Postives = 84/106 (79.25%), Query Frame = 1 
Query:    1 GQLQNACVALAKDWRTDKYLRRLESVVLVADSKMSLKVTGLGDVLAPNGGVVAVGSGQPYALAAARALWAQNALSAEEVARQAMEIAADLCVYTNANFTVEILDAE 318
            GQL  ACV LAKDWRTD+YLRRLE+++LVAD  +SL +TG GDVL P GGV+ +GSG  YALAAARAL A   + AE +AR+AM IAAD+CVYTN N T+E LDA+
Sbjct:   81 GQLMRACVELAKDWRTDRYLRRLEAMMLVADKSVSLVLTGTGDVLEPEGGVMGIGSGGNYALAAARAL-ADTDMDAETIARRAMAIAADICVYTNGNLTIETLDAD 185
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BLAST of mRNA_H-elongata_contig67075.14316.1 vs. uniprot
Match: A0A6N6VI23_9HYPH (ATP-dependent protease subunit HslV n=1 Tax=Parvibaculum sedimenti TaxID=2608632 RepID=A0A6N6VI23_9HYPH)

HSP 1 Score: 134 bits (338), Expect = 9.640e-38
Identity = 70/105 (66.67%), Postives = 88/105 (83.81%), Query Frame = 1 
Query:    1 GQLQNACVALAKDWRTDKYLRRLESVVLVADSKMSLKVTGLGDVLAPNGGVVAVGSGQPYALAAARALWAQNALSAEEVARQAMEIAADLCVYTNANFTVEILDA 315
            GQL  ACV LAKDWRTD++LRRLE++++VAD+ +SL +TG GDVL P GG+V +GSG  YALAAARAL A   LSAEE+AR+A++IA+++CVYTN N TVEILDA
Sbjct:   83 GQLTRACVELAKDWRTDRFLRRLEALMIVADAHVSLVLTGNGDVLEPEGGIVGIGSGGNYALAAARAL-ADTELSAEEIARKALKIASEICVYTNNNLTVEILDA 186
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BLAST of mRNA_H-elongata_contig67075.14316.1 vs. uniprot
Match: A0A1H2IQA3_9HYPH (ATP-dependent protease subunit HslV n=3 Tax=Stappia TaxID=152161 RepID=A0A1H2IQA3_9HYPH)

HSP 1 Score: 134 bits (337), Expect = 1.330e-37
Identity = 69/105 (65.71%), Postives = 87/105 (82.86%), Query Frame = 1 
Query:    1 GQLQNACVALAKDWRTDKYLRRLESVVLVADSKMSLKVTGLGDVLAPNGGVVAVGSGQPYALAAARALWAQNALSAEEVARQAMEIAADLCVYTNANFTVEILDA 315
            GQL  ACV LAKDWRTD+YLRRLE+++LVADS +SL +TG GDVL P GG++ +GSG  YALAAARAL A + L AEEVAR+AM++AA++CVYTN N T+E L++
Sbjct:   81 GQLMRACVELAKDWRTDRYLRRLEAMMLVADSSISLVLTGTGDVLEPEGGIMGIGSGGNYALAAARAL-ADSDLDAEEVARKAMKVAAEICVYTNENLTIESLES 184
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BLAST of mRNA_H-elongata_contig67075.14316.1 vs. uniprot
Match: A0A4R3JG61_9PROT (ATP-dependent protease subunit HslV n=2 Tax=Varunaivibrio sulfuroxidans TaxID=1773489 RepID=A0A4R3JG61_9PROT)

HSP 1 Score: 133 bits (334), Expect = 3.570e-37
Identity = 68/104 (65.38%), Postives = 84/104 (80.77%), Query Frame = 1 
Query:    1 GQLQNACVALAKDWRTDKYLRRLESVVLVADSKMSLKVTGLGDVLAPNGGVVAVGSGQPYALAAARALWAQNALSAEEVARQAMEIAADLCVYTNANFTVEILD 312
            GQL  ACV LAKDWRTD+YLR+LE+++ VAD ++SL +TG GDVL P+ GV+A+GSG  YALAAARAL  Q  L AE +AR+AM IAAD+CVYTN NFT+E +D
Sbjct:   80 GQLTRACVELAKDWRTDRYLRKLEAMMTVADKEVSLVLTGTGDVLEPDDGVMAIGSGGNYALAAARALVGQPDLGAEVIARRAMAIAADICVYTNTNFTIESID 183
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BLAST of mRNA_H-elongata_contig67075.14316.1 vs. uniprot
Match: K3WU52_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WU52_GLOUD)

HSP 1 Score: 133 bits (335), Expect = 4.680e-37
Identity = 67/110 (60.91%), Postives = 86/110 (78.18%), Query Frame = 1 
Query:    1 GQLQNACVALAKDWRTDKYLRRLESVVLVADSKMSLKVTGLGDVLAPNGGVVAVGSGQPYALAAARALWAQNALSAEEVARQAMEIAADLCVYTNANFTVEILDAEEEEE 330
            GQL  +CV LAK WRTDKYLRRLE++++V+DSK S  +TG GDV+ P+ G++ +GSG  YALAAARAL  Q  L AEE+ R+AM+IAAD+CVYTN NF VE+LD   E++
Sbjct:   96 GQLARSCVELAKAWRTDKYLRRLEAILIVSDSKQSYTLTGNGDVIEPHDGIIGIGSGGTYALAAARALIDQPNLDAEEIGRKAMQIAADICVYTNHNFVVEVLDESTEKK 205
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BLAST of mRNA_H-elongata_contig67075.14316.1 vs. uniprot
Match: UPI00145F6AD7 (ATP-dependent protease subunit HslV n=1 Tax=Chelativorans sp. ZYF759 TaxID=2692213 RepID=UPI00145F6AD7)

HSP 1 Score: 132 bits (333), Expect = 4.780e-37
Identity = 70/105 (66.67%), Postives = 87/105 (82.86%), Query Frame = 1 
Query:    4 QLQNACVALAKDWRTDKYLRRLESVVLVADSKMSLKVTGLGDVLAPNGGVVAVGSGQPYALAAARALWAQNALSAEEVARQAMEIAADLCVYTNANFTVEILDAE 318
            QL  ACV LAKDWRTD+YLRRLE+++LVAD +++L +TG GDVL P  GV+A+GSG  YALAAARAL A+  + AEEVAR+AM+IAA++CVYTN N T+E LDAE
Sbjct:   79 QLMRACVELAKDWRTDRYLRRLEAMMLVADKRVTLALTGTGDVLEPEHGVMAIGSGGNYALAAARAL-AETDMDAEEVARRAMKIAAEICVYTNPNVTLESLDAE 182
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig67075.14316.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNX4_ECTSI1.400e-5283.49ATP-dependent protease peptidase subunit n=2 Tax=E... [more]
A0A3M1JZ37_9PROT1.550e-3866.04ATP-dependent protease subunit HslV n=1 Tax=Alphap... [more]
M2XNT1_GALSU3.170e-3863.46ATP-dependent HslUV protease, peptidase subunit Hs... [more]
A0A1E5Q488_9PROT4.670e-3867.65ATP-dependent protease subunit HslV n=1 Tax=Magnet... [more]
A0A285SXX0_9HYPH9.110e-3866.04ATP-dependent protease subunit HslV n=6 Tax=Stappi... [more]
A0A6N6VI23_9HYPH9.640e-3866.67ATP-dependent protease subunit HslV n=1 Tax=Parvib... [more]
A0A1H2IQA3_9HYPH1.330e-3765.71ATP-dependent protease subunit HslV n=3 Tax=Stappi... [more]
A0A4R3JG61_9PROT3.570e-3765.38ATP-dependent protease subunit HslV n=2 Tax=Varuna... [more]
K3WU52_GLOUD4.680e-3760.91Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
UPI00145F6AD74.780e-3766.67ATP-dependent protease subunit HslV n=1 Tax=Chelat... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig67075contigH-elongata_contig67075:1227..3292 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score174.5
Seed ortholog evalue2.9e-41
Seed eggNOG ortholog2880.D8LNX4
Preferred nameHslV
KEGG koko:K01419
GOsGO:0000002,GO:0000266,GO:0000502,GO:0003674,GO:0003824,GO:0004175,GO:0004176,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006264,GO:0006508,GO:0006725,GO:0006807,GO:0006996,GO:0007005,GO:0008150,GO:0008152,GO:0008233,GO:0009058,GO:0009059,GO:0009295,GO:0009376,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019538,GO:0031597,GO:0031974,GO:0032042,GO:0032991,GO:0033955,GO:0034641,GO:0034645,GO:0042623,GO:0042645,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048285,GO:0070011,GO:0070013,GO:0070581,GO:0071704,GO:0071840,GO:0090304,GO:0140096,GO:1901360,GO:1901564,GO:1901576,GO:1902494,GO:1904949,GO:1905368,GO:1905369
EggNOG free text desc.Proteasome subunit
EggNOG OGs2RS9W@2759,COG5405@1
EC3.4.25.2
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionATP-dependent protease, HslV subunit
Ec32 orthologEc-08_005470.1
Exons5
Model size345
Cds size345
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig67075.14316.1prot_H-elongata_contig67075.14316.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig67075 1227..3292 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931061.437018-CDS-H-elongata_contig67075:1226..13161622931061.437018-CDS-H-elongata_contig67075:1226..1316Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig67075 1227..1316 -
1691679681.8911605-CDS-H-elongata_contig67075:1226..13161691679681.8911605-CDS-H-elongata_contig67075:1226..1316Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig67075 1227..1316 -
1622931061.459052-CDS-H-elongata_contig67075:1680..17481622931061.459052-CDS-H-elongata_contig67075:1680..1748Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig67075 1681..1748 -
1691679681.902138-CDS-H-elongata_contig67075:1680..17481691679681.902138-CDS-H-elongata_contig67075:1680..1748Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig67075 1681..1748 -
1622931061.475958-CDS-H-elongata_contig67075:2113..21431622931061.475958-CDS-H-elongata_contig67075:2113..2143Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig67075 2114..2143 -
1691679681.9109979-CDS-H-elongata_contig67075:2113..21431691679681.9109979-CDS-H-elongata_contig67075:2113..2143Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig67075 2114..2143 -
1622931061.4913237-CDS-H-elongata_contig67075:2727..28121622931061.4913237-CDS-H-elongata_contig67075:2727..2812Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig67075 2728..2812 -
1691679681.9247668-CDS-H-elongata_contig67075:2727..28121691679681.9247668-CDS-H-elongata_contig67075:2727..2812Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig67075 2728..2812 -
1622931061.5071547-CDS-H-elongata_contig67075:3220..32921622931061.5071547-CDS-H-elongata_contig67075:3220..3292Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig67075 3221..3292 -
1691679681.934173-CDS-H-elongata_contig67075:3220..32921691679681.934173-CDS-H-elongata_contig67075:3220..3292Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig67075 3221..3292 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig67075.14316.1

>prot_H-elongata_contig67075.14316.1 ID=prot_H-elongata_contig67075.14316.1|Name=mRNA_H-elongata_contig67075.14316.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=115bp
GQLQNACVALAKDWRTDKYLRRLESVVLVADSKMSLKVTGLGDVLAPNGG
VVAVGSGQPYALAAARALWAQNALSAEEVARQAMEIAADLCVYTNANFTV
EILDAEEEEEGCKA*
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mRNA from alignment at H-elongata_contig67075:1227..3292-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig67075.14316.1 ID=mRNA_H-elongata_contig67075.14316.1|Name=mRNA_H-elongata_contig67075.14316.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2066bp|location=Sequence derived from alignment at H-elongata_contig67075:1227..3292- (Himanthalia elongata Himel1 dioecious)
GGCCAACTCCAAAATGCTTGCGTTGCGTTGGCGAAGGACTGGAGAACCGA
CAAGTACCTCCGCCGACTAGAAGTGAGAGTGTGTGTGTGAGAGAGGGAGA
GGCGAGTCGCTTGGTCCGTGCAGCACAAACACCCGATGTCCTCCGTAATC
AACTGAAGCACAGTCCTAACATTTCACGGAGCGCGCTTAATCAACCTTTC
TTGTGGAGAGTCGTGCTCTGGGGCTCGATCAAGCCCCAACAGCGGTAACG
CACACAATCTCGACGCGTGAATAGTGTTGGACGCAACCACGGTATGCGAT
GTTCTTTTCCCGAGACGCACTCGTGTGGGCGCACGTCATCTGACAAATTT
TGCACGGTTCTTCTCTCGACTTACTTAAAACTTCTGCGCACATTTCTGTG
TGCCGCTTTTGCCGTCCCTTGCTCTCGTTGTCAACGGTCAATTTGTCCGT
TGGCATTGGTTCCTTTAAATAAATAAAAAGTCGGTCGTGCTCGTAGCAGA
TAGCAAGATGTCGCTGAAGGTGACGGGATTGGGTGACGTGCTCGCGCCGA
ACGGTGGAGTTGTCGGTGAGCAGTCGGCAAACGAAACGAAGTAAATCTTA
ACGCCTGGCTTGCGTAAATCTCTTTGTTGAAAATAATTTTCCGTGAAATG
GTTTCTTGTGCCATAGTCCCTTTATTTTCTTTTGCGAGAGAAAACGGAAC
CAAACGAAACCAAAACGGGACAAAGTAAAATGAAACGCAGCACACGGAGC
GCCAGTGCCAACGCGAATAAGACGAGAATAATGTCTGGTCTGCGTGAGGC
TTATGCGGAACAGACAAAGCATGCCGAGTGATTCCTAGCAATGACCTTGA
GAAAAACGCCGTGCATCCGTGTTCGCTTTGTGCGCTTTTCAAGACGCCCC
AGTGGAGTTAAACTTCGAGATCTTCGTCATGCCTGTAGTCTGGCCGGGCG
TATCCCTATCCCGTTATATCCACTTTGGAGAGACCACGTTGAACTTTATC
TTCCCGTGTGGTGATGGCTTGCAATGCTTTTCAGACACGATATCGTTTCG
AATTGAACTCTCGTGTCGTCTGTCACATGTCACAAACCTGTCACATGCCG
ACCCACGCCGCTATGAAACTGCTTAAAACGAAATCGCCACGATCTTCAGC
GGTGGGTTCGGGCCAACCATACGCCTTGGGTGAGCATAGCGACATAGCGA
ATCTGCTGCCGGATGTACAACTTGTAGACTTTTGCATATGTGCTTATTGT
GTACTTCGTATACACGCGCTTTATCGATATATTTTTCTCAATGTGTAACT
AGTATTTTCGAAATACTTAAGCTATATCAAGCTGGATGTACGCCTGTTAT
GGTCTGCAACGCGTATGCCTTTTTCAGTTCAAATTAGCACCTTACATGCT
TGGCCGCACGATATAATGACGCGTTACTCATGAGGCGAGTCCTAAGTACT
TTTTACGAATCGACTGGCTTGTCATTTCTTGGCGCCAGGGCCTCTGACGT
AACGTGACGTGACCCGTTGGCGTGTCGCGTGTCGCTTGTCCCAGCGGCCG
CGCGGGCTCTTTGGGCGCAAAACGCCTTGAGTGCAGAGGAGGTCGCTCGC
CAGGCAATGGAGGTGAGAGGTTGCCAAAAACGTGCTTATGCGGTGAATAA
CTCAGGGAGGGGGTTGCCTCCCCGACGAAATCCCCGTCCTCGATTTCACG
CTGCTGCTTTGGTGGTTGTCTCTGTCTATTGATTGCATCTGGGTATCAAC
TGACCATTTGTTGGAGGAGGGGTATTTCCCGTTTTTGGTAGGCATTTCTT
CGCTTGTTTAGGCTCGTTCCTGAGGAGTCAGGGGTAACAAGGAATCAAAA
GAGGTACTCTAAGTGATGTTCAGTGCATACCAACCGTCGGCGTTTGCACC
GCCGCCATATGGACAGACTCTTAACGTCTTTATTTCCGGTATTCCATCCC
CCCTCTGTCGCAATCGCTTCGAAAAGATCGCGGCTGATTTATGTGTGTAC
ACCAACGCCAACTTCACCGTGGAAATCCTCGATGCGGAGGAGGAAGAAGA
GGGCTGTAAGGCGTGA
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Coding sequence (CDS) from alignment at H-elongata_contig67075:1227..3292-

>mRNA_H-elongata_contig67075.14316.1 ID=mRNA_H-elongata_contig67075.14316.1|Name=mRNA_H-elongata_contig67075.14316.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=690bp|location=Sequence derived from alignment at H-elongata_contig67075:1227..3292- (Himanthalia elongata Himel1 dioecious)
GGCCAACTCCAAAATGCTTGCGTTGCGTTGGCGAAGGACTGGAGAACCGA
CAAGTACCTCCGCCGACTAGAAGGCCAACTCCAAAATGCTTGCGTTGCGT
TGGCGAAGGACTGGAGAACCGACAAGTACCTCCGCCGACTAGAATCGGTC
GTGCTCGTAGCAGATAGCAAGATGTCGCTGAAGGTGACGGGATTGGGTGA
CGTGCTCGCGCCGAACGGTGGAGTTGTCGTCGGTCGTGCTCGTAGCAGAT
AGCAAGATGTCGCTGAAGGTGACGGGATTGGGTGACGTGCTCGCGCCGAA
CGGTGGAGTTGTCGCGGTGGGTTCGGGCCAACCATACGCCTTGGCGGTGG
GTTCGGGCCAACCATACGCCTTGGCGGCCGCGCGGGCTCTTTGGGCGCAA
AACGCCTTGAGTGCAGAGGAGGTCGCTCGCCAGGCAATGGAGCGGCCGCG
CGGGCTCTTTGGGCGCAAAACGCCTTGAGTGCAGAGGAGGTCGCTCGCCA
GGCAATGGAGATCGCGGCTGATTTATGTGTGTACACCAACGCCAACTTCA
CCGTGGAAATCCTCGATGCGGAGGAGGAAGAAGAGGGCTGTAAGGCGTGA
ATCGCGGCTGATTTATGTGTGTACACCAACGCCAACTTCACCGTGGAAAT
CCTCGATGCGGAGGAGGAAGAAGAGGGCTGTAAGGCGTGA
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