mRNA_H-elongata_contig66994.14301.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig66994.14301.1
Unique NamemRNA_H-elongata_contig66994.14301.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig66994.14301.1 vs. uniprot
Match: D8LJK8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJK8_ECTSI)

HSP 1 Score: 270 bits (689), Expect = 6.550e-87
Identity = 149/270 (55.19%), Postives = 173/270 (64.07%), Query Frame = 1
Query:    1 DEQAFCSGSRDTSLRLWDVETGACTIKAREPRNIVTCLKYLSES-SSVVVQGGEDLRLRVWDSRQGGLTPVLTIKGYIYFPLCLDVSEHGPEVLTSSKGFDGAGCEAKLWDLRQTRLPVREYTGHTQDTTACVFFHSKDGSVGPKVVRGG-----IEAWPEGGIPD-RWMIATASKDGTIKIYDLSNGNLLIDHVEHECGGYTGLALGGEISMRYPLLYATTITGGLYVLRLEAERVAAAAILSTDVETIQRRGPLRLRCIGFVRGNIIL 789
            DE+   SGS       WDV+TG CT  A+ PRN+VTCLK LS   SS VVQ               GL   +T+ GY +FPL LDVS  G +VLTS KGF+GAGCE KLWDLR   +PVREYTGHTQDTTACVF  SK+G  G    R G        WP    P  R MIATASKDGT+KIYDL++G++L+DHVE ECGGYTGLA+  +     P+ YA+TITGGLY LRLE E+VA A    T +      G LRLRC+GFVRGN IL
Sbjct:   39 DEKTLYSGSXXXXXXAWDVQTGQCTSSAKVPRNLVTCLKCLSGGPSSSVVQXXXXXXXXXXXXXXXGLRSSMTVDGYTFFPLFLDVSSDGHQVLTSCKGFNGAGCETKLWDLRSPGIPVREYTGHTQDTTACVFVTSKEGGDGGSGAREGGYGLSPAPWPSLSAPSSRGMIATASKDGTVKIYDLADGSILVDHVEPECGGYTGLAIQRDSRTGGPVFYASTITGGLYALRLE-EKVATAGTSRTGLG----EGGLRLRCVGFVRGNPIL 303          
BLAST of mRNA_H-elongata_contig66994.14301.1 vs. uniprot
Match: A0A6H5JBE9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE9_9PHAE)

HSP 1 Score: 265 bits (677), Expect = 5.360e-85
Identity = 148/270 (54.81%), Postives = 174/270 (64.44%), Query Frame = 1
Query:    1 DEQAFCSGSRDTSLRLWDVETGACTIKAREPRNIVTCLKYLS-ESSSVVVQGGEDLRLRVWDSRQGGLTPVLTIKGYIYFPLCLDVSEHGPEVLTSSKGFDGAGCEAKLWDLRQTRLPVREYTGHTQDTTACVFFHSKDGSV-GPKVVRGGIEAWPEGGIP-----DRWMIATASKDGTIKIYDLSNGNLLIDHVEHECGGYTGLALGGEISMRYPLLYATTITGGLYVLRLEAERVAAAAILSTDVETIQRRGPLRLRCIGFVRGNIIL 789
            DE+A  SGSRDTS+R WDV+TG C   A+ PRN+VTCLK LS E SS V QGGEDL+LRVWD+R+GGL P +TI GY +FP                           LWDLR   +PVREYTGHTQDTTACVF  SK+G   G  V   G    P           R MIATASKDGT+KIYDL++G++L+DHVE ECGGYTGLA+  +     P+ YA+TITGGLY LRLE E VA AA   T+++     G LRLRC+GFVRGN IL
Sbjct:   73 DEKALYSGSRDTSIRAWDVQTGQCISSAKVPRNLVTCLKCLSGELSSSVAQGGEDLKLRVWDAREGGLRPSMTIDGYTFFP---------------------------LWDLRSPGIPVREYTGHTQDTTACVFVTSKEGGDDGSGVEENGYGVSPSPSTSLSAPSSRGMIATASKDGTVKIYDLADGSILVDHVEPECGGYTGLAIQRDSRTGAPVFYASTITGGLYALRLE-EEVATAAQSQTELQ----EGGLRLRCVGFVRGNPIL 310          
BLAST of mRNA_H-elongata_contig66994.14301.1 vs. uniprot
Match: A0A835ZHR6_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHR6_9STRA)

HSP 1 Score: 171 bits (433), Expect = 7.180e-49
Identity = 110/244 (45.08%), Postives = 134/244 (54.92%), Query Frame = 1
Query:    1 DEQAFCSGSRDTSLRLWDVETGACTIKAREPRNIVTCLKYL--SESSSVVVQGGEDLRLRVWDSRQGGLTPVLTIKGYIYFPLCLDVSEHGPEVLTSSKGFDGAGCEAKLWDLRQTRLPVREYTGHTQDTTACVFFHSKDGSVGPKVVRGGIEAWPEGGIPDRWMIATASKDGTIK--IYDLSNGNLLIDHVEHECGGYTGLALGGEISMRYPLLYATTITGGLYVLRL---EAERVAAAAILS 711
            DE    SGSRDTS+RLWDV TG        PRN+VTCLK +   E ++VVVQGGEDL+LR+WD R     P  T+ G++YFPLCLDVSE G  +LT SKGF+  GCE +LWD R+T   V+EY GH QD TAC+        + P  +     A   GG      + TASKD TIK  ++   +G LL D  E                     L A T TGGLY L+L   EA    AA +LS
Sbjct:   43 DETHLWSGSRDTSVRLWDVSTGQQRGMVATPRNLVTCLKCMPGEEGTNVVVQGGEDLKLRLWDFRTPSSVPAQTLDGFVYFPLCLDVSEDGNYLLTGSKGFNSVGCEGRLWD-RRTGQVVQEYNGHAQDVTACL--------LAPAAL-----AASSGG-----AVITASKDQTIKARVWGRESGQLLSDFAEPH------------------RLCAATFTGGLYDLQLSEGEAGGETAAPVLS 249          
BLAST of mRNA_H-elongata_contig66994.14301.1 vs. uniprot
Match: K3WSF6_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSF6_GLOUD)

HSP 1 Score: 158 bits (399), Expect = 9.460e-43
Identity = 81/198 (40.91%), Postives = 115/198 (58.08%), Query Frame = 1
Query:    1 DEQAFCSGSRDTSLRLWDVETGACTIKAREPRNIVTCLKYLSESSSVVVQGGEDLRLRVWDSRQGGLTPVLTIKGYIYFPLCLDVSEHGPEVLTSSKGFDGAGCEAKLWDLRQTRLPVREYTGHTQDTTACVFFHSKDGSVGPKVVRGGIEAWPEGGIPDRWMIATASKDGTIKIYDLSNGNLLIDHVEHECGGYTGL 594
            DE + CSG RDT    WD+ TG    K    +N++TC K++     +VVQG EDL L++WD R     P  +  GY+YF LC+DVS  G   LTSSKGF+G GCE ++WD R+T   + E+ GH QDTT+C F  S  GS     V    ++     IP   +  TASKDG++K++D +  ++L + +E   G +T +
Sbjct:  129 DETSLCSGGRDTQTIFWDLTTGRLKAKNTTSQNVITCSKWVPVEP-LVVQGSEDLTLKLWDERTNLRAPAQSFHGYVYFALCVDVSPDGNYFLTSSKGFNGVGCEVRIWD-RRTGKQLYEFNGHQQDTTSCCFLPSATGSSSNDSVTSPADSVRASAIP---IPVTASKDGSVKVWDAATSSVLCEALEPSGGMFTSI 321          
BLAST of mRNA_H-elongata_contig66994.14301.1 vs. uniprot
Match: A0A067CE75_SAPPC (Uncharacterized protein (Fragment) n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CE75_SAPPC)

HSP 1 Score: 148 bits (373), Expect = 4.230e-39
Identity = 80/217 (36.87%), Postives = 116/217 (53.46%), Query Frame = 1
Query:    4 EQAFCSGSRDTSLRLWDVETGACTIKAREPRNIVTCLKYLSESSSVVVQGGEDLRLRVWDSRQGGLTPVLTIKGYIYFPLCLDVSEHGPEVLTSSKGFDGAGCEAKLWDLRQTRLPVREYTGHTQDTTACVFFHSKDGSVGPKVVRGGIEAWPEGGIPDRWMIATASKDGTIKIYDLSNGNLLIDHVEHECGGYTGLALGGEISMRYPLLYATTITG 654
            E    SGSRDT   LWDV TG         +NIVTC+ ++ +  ++V QGGEDL +R+WD+R    +P  TI+GY+YFPL +D S+ G  +LTSSKGF+G GCE ++WD R  +L V E   H QD TAC +   K+                           TASKD +++I++ ++G L+    +   G +TG+A     S     ++ T+  G
Sbjct:  136 ETHLASGSRDTGTSLWDVTTGTRVQHTTTSQNIVTCMTWVPQCETLVAQGGEDLCVRLWDARSWK-SPAQTIQGYVYFPLSIDASDDGNYLLTSSKGFNGVGCEGRVWDRRTGKL-VTEMHVHLQDATACAYVRHKNA-----------------------FAVTASKDSSLRIWNSASGELVASSFDQSSGMFTGVACQSLESSDVVRVFTTSFAG 327          
BLAST of mRNA_H-elongata_contig66994.14301.1 vs. uniprot
Match: T0QNJ3_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QNJ3_SAPDV)

HSP 1 Score: 148 bits (373), Expect = 6.040e-39
Identity = 78/217 (35.94%), Postives = 117/217 (53.92%), Query Frame = 1
Query:    4 EQAFCSGSRDTSLRLWDVETGACTIKAREPRNIVTCLKYLSESSSVVVQGGEDLRLRVWDSRQGGLTPVLTIKGYIYFPLCLDVSEHGPEVLTSSKGFDGAGCEAKLWDLRQTRLPVREYTGHTQDTTACVFFHSKDGSVGPKVVRGGIEAWPEGGIPDRWMIATASKDGTIKIYDLSNGNLLIDHVEHECGGYTGLALGGEISMRYPLLYATTITG 654
            E    SGSRDT   LWDV T A        +NIVTC+ ++ +  +++ QGGEDL +R+WD+R    +P  TI+GY+YFPL +D S+ G  +LTSSKGF+G GCE ++WD R  +L V E  GH QD +AC +   K+                           TASKD +++I++ ++G L+    +H  G +T +A     +     ++ T+  G
Sbjct:  140 ESNLASGSRDTGTSLWDVTTRARVQHTTTSQNIVTCMTWVPQCETLLAQGGEDLCVRLWDTRSWK-SPAQTIQGYVYFPLSIDASDDGNYLLTSSKGFNGVGCEGRVWDRRTGKL-VTEMHGHLQDASACAYMRHKNAYA-----------------------VTASKDSSLRIWNSASGELITSSFDHSSGMFTSVACRSVETSDEVTVFTTSFAG 331          
BLAST of mRNA_H-elongata_contig66994.14301.1 vs. uniprot
Match: A0A8K1CV93_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CV93_PYTOL)

HSP 1 Score: 146 bits (368), Expect = 6.780e-38
Identity = 86/224 (38.39%), Postives = 122/224 (54.46%), Query Frame = 1
Query:    1 DEQAFCSGSRDTSLRLWDVETGACTIKAREPRNIVTCLKYLSESSSVVVQGGEDLRLRVWDSRQGGLTPVLTIKGYIYFPLCLDVSEHGPEVLTSSKGFDGAGCEAKLWDLRQTRLPVREYTGHTQDTTACVFFHSK--DGSVGPKVVRGGIEAWPEGGIPDRWMIATASKDGTIKIYDLSNGNLLIDHVEHECGG-YTGLALGGEISMRYPLLYATTITGGLY 663
            DE + CSG RDT    WD+ T     K    +N++TC K++  +  VV+QG EDL +++WD R    TPV T++GY+YFPLCLDVS  G   +TSSKGF+G G E ++WD R+    + ++ GH QD +AC F      D S G   V          GIP      +ASKDG+IK+++++  N L+       G  +T LA  G+       + A T  G L+
Sbjct:  156 DETSLCSGGRDTQTMFWDLTTAKIKSKNTTAQNVITCSKWVP-TEHVVLQGSEDLSVKLWDERSALRTPVQTLRGYVYFPLCLDVSRDGLYFMTSSKGFNGVGAEVRVWD-RRVGKQLLQFEGHQQDASACCFLPRGVLDSSEGEAPVPNASN-----GIPTP---VSASKDGSIKVWNVNAENQLLCEANEPSGRMFTSLASTGDDGT----VLAATFNGDLH 365          
BLAST of mRNA_H-elongata_contig66994.14301.1 vs. uniprot
Match: A0A1V9Z8M6_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z8M6_9STRA)

HSP 1 Score: 145 bits (365), Expect = 1.170e-37
Identity = 86/234 (36.75%), Postives = 122/234 (52.14%), Query Frame = 1
Query:    4 EQAFCSGSRDTSLRLWDVETGACTIKAREPRNIVTCLKYLSESSSVVVQGGEDLRLRVWDSRQGGLTPVLTIKGYIYFPLCLDVSEHGPEVLTSSKG-------------FDGAGCEAKLWDLRQTRLPVREYTGHTQDTTACVFFHSKDGSVGPKVVRGGIEAWPEGGIPDRWMIATASKDGTIKIYDLSNGNLLIDHVEHECGGYTGLALGGEISMRYPLLYATTITGGLYV 666
            E    SGSRDTS+ LWDV T          +NIVTC+ ++    ++V QGGEDLR+R+WDSR    +PV TI+GY+YFPL LDVS+ G  +LTSSKG             F+G GCE ++WD R+T   V E  GH QD TAC +   ++  V                        TASKD ++++++ ++G L+    +H  G +T L            ++ ++ TG L V
Sbjct:  141 ETQLASGSRDTSVSLWDVATTTQLQHTTTSQNIVTCMAWVPIHDTLVAQGGEDLRVRIWDSR-AWKSPVQTIEGYVYFPLSLDVSDDGNYILTSSKGTILSWICWLMPLGFNGVGCEGRVWD-RRTGKQVCEMAGHLQDATACSYIKQRNEYV-----------------------LTASKDSSLRVWNSASGALVSSTYDHALGMFTALTSLPPDDAGIVRIFTSSFTGHLAV 349          
BLAST of mRNA_H-elongata_contig66994.14301.1 vs. uniprot
Match: A0A485KVW2_9STRA (Aste57867_12386 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KVW2_9STRA)

HSP 1 Score: 144 bits (362), Expect = 4.630e-37
Identity = 79/198 (39.90%), Postives = 110/198 (55.56%), Query Frame = 1
Query:    4 EQAFCSGSRDTSLRLWDVETGACTIKAREPRNIVTCLKYLSESSSVVVQGGEDLRLRVWDSRQGGLTPVLTIKGYIYFPLCLDVSEHGPEVLTSSKGFDGAGCEAKLWDLRQTRLPVREYTGHTQDTTACVFFHSKDGSVGPKVVRGGIEAWPEGGIPDRWMIATASKDGTIKIYDLSNGNLLIDHVEHECGGYTGLA 597
            E    SGSRDT + LWDV T          +NIVTC+ ++   ++VV QGGEDLR+R+WD+R     P  TI+GYIYFPL +  S+ G  +LTSSKGF+  GCE ++WD R+T   V E  GH QD TAC +   ++          GI               TASKD +I+++D + G+LL    +   G +T ++
Sbjct:  168 ESTLASGSRDTGVSLWDVATSMRRQHTITSQNIVTCMAWVPRDANVVAQGGEDLRVRLWDAR-AWKAPTQTIEGYIYFPLSIACSDDGHYLLTSSKGFNAVGCEGRVWD-RRTGKQVAEMRGHAQDATACAYIPGRNHE--------GI---------------TASKDSSIRVWDTTTGDLLASTQDANAGMFTSVS 340          
BLAST of mRNA_H-elongata_contig66994.14301.1 vs. uniprot
Match: A0A5D6Y005_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y005_9STRA)

HSP 1 Score: 148 bits (373), Expect = 8.920e-37
Identity = 95/263 (36.12%), Postives = 132/263 (50.19%), Query Frame = 1
Query:    4 EQAFCSGSRDTSLRLWDVETGACTIKAREPRNIVTCLKYLSESSSVVVQGGEDLRLRVWDSRQGGLTPVLTIKGYIYFPLCLDVSEHGPEVLTSSKGFDGAGCEAKLWDLRQTRLPVREYTGHTQDTTACVFFHSKDGSVGPKVVRGGIEAWPEGGIPDRWMIATASKDGTIKIYDLSNGNLLIDHVEHECGGYTGL-ALGGEISMRYPLLYATTITGGLYVLRLEAERVAAAAILSTDVETIQRRGPLRLRCIGFVRGNIIL 789
            E   CSG RDT    WD+ TG    K    +N+VTC K++     +VVQG EDL L+ WD R    TP     GY+YF L +DVS     +LTSSKGF+G GCE ++WD R+T   + E++GH QD T+C F      S              +  IP   +  TASKDGT+K++D +   +L +  E   G +TGL A+ G        L A+T  G ++     A +  A  I +++V    R  P  LR +   R   +L
Sbjct:  173 ETTLCSGGRDTQTIFWDLVTGKLKAKNTTSQNVVTCSKWIP-LEPLVVQGSEDLTLKFWDERTELRTPAQIFHGYVYFALSVDVSPDTSYILTSSKGFNGVGCEVRVWD-RRTGKQLLEFSGHQQDATSCCFLPGTSDS--------------QSAIP---IPVTASKDGTVKVWDAAASRVLCEASEPTGGMFTGLCAVSGST------LLASTFHGAVHAFEFNAAQ--AIYIYASEV----RAAPSALRVVVMGRDAAVL 404          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig66994.14301.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJK8_ECTSI6.550e-8755.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JBE9_9PHAE5.360e-8554.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZHR6_9STRA7.180e-4945.08WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
K3WSF6_GLOUD9.460e-4340.91Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A067CE75_SAPPC4.230e-3936.87Uncharacterized protein (Fragment) n=1 Tax=Saprole... [more]
T0QNJ3_SAPDV6.040e-3935.94Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]
A0A8K1CV93_PYTOL6.780e-3838.39Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A1V9Z8M6_9STRA1.170e-3736.75Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A485KVW2_9STRA4.630e-3739.90Aste57867_12386 protein n=1 Tax=Aphanomyces stella... [more]
A0A5D6Y005_9STRA8.920e-3736.12Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig66994contigH-elongata_contig66994:440..2941 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score268.1
Seed ortholog evalue4.4e-69
Seed eggNOG ortholog2880.D8LJK8
Preferred nameWDR31
EggNOG free text desc.positive regulation of Golgi to plasma membrane protein transport
EggNOG OGsKOG0279@1,KOG0279@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons4
Model size792
Cds size792
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig66994.14301.1prot_H-elongata_contig66994.14301.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig66994 440..2941 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931059.7731984-CDS-H-elongata_contig66994:439..6791622931059.7731984-CDS-H-elongata_contig66994:439..679Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig66994 440..679 +
1691679681.2734833-CDS-H-elongata_contig66994:439..6791691679681.2734833-CDS-H-elongata_contig66994:439..679Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig66994 440..679 +
1622931059.7943318-CDS-H-elongata_contig66994:923..10041622931059.7943318-CDS-H-elongata_contig66994:923..1004Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig66994 924..1004 +
1691679681.283738-CDS-H-elongata_contig66994:923..10041691679681.283738-CDS-H-elongata_contig66994:923..1004Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig66994 924..1004 +
1622931059.8143563-CDS-H-elongata_contig66994:1489..17091622931059.8143563-CDS-H-elongata_contig66994:1489..1709Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig66994 1490..1709 +
1691679681.2930534-CDS-H-elongata_contig66994:1489..17091691679681.2930534-CDS-H-elongata_contig66994:1489..1709Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig66994 1490..1709 +
1622931059.8291016-CDS-H-elongata_contig66994:2690..29411622931059.8291016-CDS-H-elongata_contig66994:2690..2941Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig66994 2691..2941 +
1691679681.3022342-CDS-H-elongata_contig66994:2690..29411691679681.3022342-CDS-H-elongata_contig66994:2690..2941Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig66994 2691..2941 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig66994.14301.1

>prot_H-elongata_contig66994.14301.1 ID=prot_H-elongata_contig66994.14301.1|Name=mRNA_H-elongata_contig66994.14301.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=264bp
DEQAFCSGSRDTSLRLWDVETGACTIKAREPRNIVTCLKYLSESSSVVVQ
GGEDLRLRVWDSRQGGLTPVLTIKGYIYFPLCLDVSEHGPEVLTSSKGFD
GAGCEAKLWDLRQTRLPVREYTGHTQDTTACVFFHSKDGSVGPKVVRGGI
EAWPEGGIPDRWMIATASKDGTIKIYDLSNGNLLIDHVEHECGGYTGLAL
GGEISMRYPLLYATTITGGLYVLRLEAERVAAAAILSTDVETIQRRGPLR
LRCIGFVRGNIIL*
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mRNA from alignment at H-elongata_contig66994:440..2941+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig66994.14301.1 ID=mRNA_H-elongata_contig66994.14301.1|Name=mRNA_H-elongata_contig66994.14301.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2502bp|location=Sequence derived from alignment at H-elongata_contig66994:440..2941+ (Himanthalia elongata Himel1 dioecious)
GACGAGCAGGCTTTTTGTTCAGGTTCTCGGGACACCAGCCTTCGTTTATG GGACGTGGAGACTGGGGCTTGCACGATCAAAGCCAGAGAGCCTCGGAATA TAGTGACGTGCCTCAAGTACCTCTCCGAGTCGTCCTCCGTGGTGGTGCAG GGTGGTGAGGACCTTAGGCTCCGGGTTTGGGACTCACGACAGGGCGGGCT AACGCCCGTATTAACAATTAAGGGTTACATCTACTTCCCGGTGCGTGTAC TACAAAATATTAACTAGAGGAGTCTAAAACAGCACTGTACAATACCTTAC TTTTTTACATTATATTAAAAAATTACAGTACTGCGTAGAAATGCTCAAAA ATATACATACCTTCTTCGACAGCCGCAGTCTTACTAATAAACGTTTGACT CACACAACTAGGAGTGTATCATGAGACATATAGCTGGTACCGTGCGTTGC TCTGACATTTGAACTTTGGATTGACATGTCACAGCTGTGTCTCGACGTCT CCGAACATGGTCCAGAGGTCCTGACATCAAGCAAGGGGTTTGATGGCGCA GGCTGCGAAGCGAAGGTTATATAGCGTACAAATTCCACGGTATATAAAGC CTCCGGAATAAAGGCGTTTTCAAGACTTCTGATACCCACCATGTGGCTCT AACAGTTATACCACGAAGCCGCTCTGTTGTGCCGTCTGTGCAACTATGTC GTGACCAGTCGCGCCAAAACTGGGCAATACATATATGACAAGCGAGAGAA AATAAAAATAAAACGTTACCTGATAATATGTTTTCTGACGGTCAGGCGGT CATCACGTGACGCCCTTGGAGGTTGGTTGGTCCATATTACTTTTCAACCG TATTTACTGGAGGTTCGTAGTTCTTACCTTTCGGTGAGGAAAGGGTGAAG CGCAAATATTGATGCACCGTGAGCCCACTGAGATGTACTCATTGTCGACA CACAGTGCGTACTATCGTACTCCCACGTTCATAGCATGAGGTGACCATGA TAACTCTACTCGCACCTTCAATATCTTGTGGTCGCTGGGGCTTGTGTCAG CTTTGGGACCTTCGCCAGACGCGTTTGCCAGTTCGAGAGTACACGGGACA CACACAGGACACTACCGCGTGTGTCTTTTTCCACAGCAAGGATGGATCGG TAGGTCCAAAGGTGGTAAGAGGGGGGATCGAGGCTTGGCCAGAAGGGGGA ATTCCTGACCGCTGGATGATCGCCACGGCTTCCAAGGATGGTACTATTAA AATATACGATCTCTCCAACGGTGCGTAATCAATCGTGCAAATTGCTCAAA TCTTGAATGACCTATGTTTCTCTCTCTCTGCGAATGAGCACAAAAGGACG TTCATTCATGAAAAGGGATTTCAACGTTGACTAAGAAAGCGCTGCTCGCA CGTGGCCTCCAAAAGAAAATAAATTTATTCTTATAAGAATCGTATTTAAA ACACGAAAGCCGCGGACTAACGGGATCTCACTGAATAAGACATTTTACTA CCATCTCGGAACGGTCCTGAAGTCCTTGCCTGAAGTGACTTCTGGGGGAT ATTCCTTACACTGCGGTATTACTGCTGTGTGCAAGGCGTGTTATTTACGA TGCCTGGGAATAGTAATGGGGATGAATGACTGAAAAAAAGAGGGGAACAC TTACGAATTCCCGCAGCCCATTTTCTTCCTCTAACAGTAATAGATTGATA TGCAGAAATATCTCTACCGGGTCTTACCAATATATATCGTTTACCTATCC CTAAAATCCCTTACTAACTTCAACCCACTCTCCTCTAGGATCTTGTTTGG TGTCTCCAAATTATGAATAATGTAACTGTACAGGAAAGTGATGGGATCCC CGATATTAAACCTTCGACCCCATGAATTTACTAATATTATATTGGGGAAC ACGATTAATCACATGTGGCGGTTTTGTGTTCAAAGGTAGTTATGTACACA TTCGAACCTGATGATCGCTGGTTCCCTGAACTGGATACCTCACGATGCTA AGAAGGCGTGGATGTTCGGAGTGTTGGAATGTGTTCATAATTTTCAAAAG ACAAATGGCTACTACGTAACGTTTCTTTTTCCCCCACCTATCCTGGAAAA CAAACGACATTCCATTTGAAGTATTGTCTAAATGTAGGCTATCTACCACA CTCTGACATACAACACTCGAATAGCTGCGCGACGGTGCACATGCTGCCAC CATGTTCGACACTTAGCTACTATATCCTGATGTGTGTTAAACAAACGGCA GGCAACCTTTTGATCGATCACGTGGAACATGAGTGTGGCGGTTACACTGG CCTCGCATTGGGTGGGGAAATCAGCATGAGATACCCCCTCCTATACGCAA CCACCATCACAGGGGGACTCTACGTGCTACGGCTAGAAGCGGAGCGAGTC GCCGCCGCCGCTATCTTATCCACTGATGTGGAAACAATACAGAGAAGAGG GCCTCTGCGCTTGCGGTGCATTGGGTTTGTTCGTGGTAATATAATTTTAT AG
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Coding sequence (CDS) from alignment at H-elongata_contig66994:440..2941+

>mRNA_H-elongata_contig66994.14301.1 ID=mRNA_H-elongata_contig66994.14301.1|Name=mRNA_H-elongata_contig66994.14301.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1584bp|location=Sequence derived from alignment at H-elongata_contig66994:440..2941+ (Himanthalia elongata Himel1 dioecious)
GACGAGCAGGCTTTTTGTTCAGGTTCTCGGGACACCAGCCTTCGTTTATG
GGACGTGGAGACTGGGGCTTGCACGATCAAAGCCAGAGAGCCTCGGAATA
TAGTGACGTGCCTCAAGTACCTCTCCGAGTCGTCCTCCGTGGTGGTGCAG
GGTGGTGAGGACCTTAGGCTCCGGGTTTGGGACTCACGACAGGGCGGGCT
AACGCCCGTATTAACAATTAAGGGTTACATCTACTTCCCGGACGAGCAGG
CTTTTTGTTCAGGTTCTCGGGACACCAGCCTTCGTTTATGGGACGTGGAG
ACTGGGGCTTGCACGATCAAAGCCAGAGAGCCTCGGAATATAGTGACGTG
CCTCAAGTACCTCTCCGAGTCGTCCTCCGTGGTGGTGCAGGGTGGTGAGG
ACCTTAGGCTCCGGGTTTGGGACTCACGACAGGGCGGGCTAACGCCCGTA
TTAACAATTAAGGGTTACATCTACTTCCCGCTGTGTCTCGACGTCTCCGA
ACATGGTCCAGAGGTCCTGACATCAAGCAAGGGGTTTGATGGCGCAGGCT
GCGAAGCGAAGCTGTGTCTCGACGTCTCCGAACATGGTCCAGAGGTCCTG
ACATCAAGCAAGGGGTTTGATGGCGCAGGCTGCGAAGCGAAGCTTTGGGA
CCTTCGCCAGACGCGTTTGCCAGTTCGAGAGTACACGGGACACACACAGG
ACACTACCGCGTGTGTCTTTTTCCACAGCAAGGATGGATCGGTAGGTCCA
AAGGTGGTAAGAGGGGGGATCGAGGCTTGGCCAGAAGGGGGAATTCCTGA
CCGCTGGATGATCGCCACGGCTTCCAAGGATGGTACTATTAAAATATACG
ATCTCTCCAACGCTTTGGGACCTTCGCCAGACGCGTTTGCCAGTTCGAGA
GTACACGGGACACACACAGGACACTACCGCGTGTGTCTTTTTCCACAGCA
AGGATGGATCGGTAGGTCCAAAGGTGGTAAGAGGGGGGATCGAGGCTTGG
CCAGAAGGGGGAATTCCTGACCGCTGGATGATCGCCACGGCTTCCAAGGA
TGGTACTATTAAAATATACGATCTCTCCAACGGCAACCTTTTGATCGATC
ACGTGGAACATGAGTGTGGCGGTTACACTGGCCTCGCATTGGGTGGGGAA
ATCAGCATGAGATACCCCCTCCTATACGCAACCACCATCACAGGGGGACT
CTACGTGCTACGGCTAGAAGCGGAGCGAGTCGCCGCCGCCGCTATCTTAT
CCACTGATGTGGAAACAATACAGAGAAGAGGGCCTCTGCGCTTGCGGTGC
ATTGGGTTTGTTCGTGGTAATATAATTTTATAGGCAACCTTTTGATCGAT
CACGTGGAACATGAGTGTGGCGGTTACACTGGCCTCGCATTGGGTGGGGA
AATCAGCATGAGATACCCCCTCCTATACGCAACCACCATCACAGGGGGAC
TCTACGTGCTACGGCTAGAAGCGGAGCGAGTCGCCGCCGCCGCTATCTTA
TCCACTGATGTGGAAACAATACAGAGAAGAGGGCCTCTGCGCTTGCGGTG
CATTGGGTTTGTTCGTGGTAATATAATTTTATAG
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