mRNA_H-elongata_contig66979.14298.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig66979.14298.1
Unique NamemRNA_H-elongata_contig66979.14298.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig66979.14298.1 vs. uniprot
Match: D7G6Z6_ECTSI (H(+)-exporting diphosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6Z6_ECTSI)

HSP 1 Score: 390 bits (1002), Expect = 3.930e-127
Identity = 203/257 (78.99%), Postives = 224/257 (87.16%), Query Frame = 1
Query:   16 RYAVNYPKLPVKTAPALGGAALTTLIVLLLVPPGAKPVVLVMGICGVGVIVTSWLAGSVLSKDDGTPAMRAVSDAIKEGAEGFLKVQYSAIAKISVILLMFIVASYVMRPAGSSETHNEGVRLIGNPTLGLISGGCFLVGALCSAGAGYVSMWVSANANIRVVSAARRSYGEALVVCFRGGAFSAVLAITLCVGGVTLLYVALYSWYVARGVLVETDMPVLMVEYGFGASFVALFMQLGGGIYTKAADVGADLVGKV 786
            R++  Y +LPVKTAP L   A+ TL++LLL+P G KP++LVMG C  G++VT WL+ SVLSKDDGTPAMRAVSD IKEGAEGFLKVQY+AIAKI+V LL FIV SYV+RP GSSE  N GVR IGN TLGLISG CFLVGALCSA AGY+SMWVSA+ANIRV SAARR YGEALV+CFRGGAFSAVL ITLCV GVTLLYVALY+WYVARGVL +TD+PVLMV YGFGASFVALFMQLGGGIYTKAADVGADLVGKV
Sbjct:   89 RFSPAYHRLPVKTAPGLAATAVATLLLLLLMPSGTKPIILVMGCCSAGILVTGWLSDSVLSKDDGTPAMRAVSDPIKEGAEGFLKVQYTAIAKIAVFLLAFIVMSYVLRPTGSSELQNTGVRRIGNTTLGLISGACFLVGALCSAAAGYISMWVSAHANIRVASAARRGYGEALVICFRGGAFSAVLDITLCVAGVTLLYVALYTWYVARGVLDDTDVPVLMVGYGFGASFVALFMQLGGGIYTKAADVGADLVGKV 345          
BLAST of mRNA_H-elongata_contig66979.14298.1 vs. uniprot
Match: A0A6H5KNP5_9PHAE (H(+)-exporting diphosphatase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNP5_9PHAE)

HSP 1 Score: 339 bits (869), Expect = 1.070e-111
Identity = 178/226 (78.76%), Postives = 193/226 (85.40%), Query Frame = 1
Query:  109 PPGAKPVVLVMGICGVGVIVTSWLAGSVLSKDDGTPAMRAVSDAIKEGAEGFLKVQYSAIAKISVILLMFIVASYVMRPAGSSETHNEGVRLIGNPTLGLISGGCFLVGALCSAGAGYVSMWVSANANIRVVSAARRSYGEALVVCFRGGAFSAVLAITLCVGGVTLLYVALYSWYVARGVLVETDMPVLMVEYGFGASFVALFMQLGGGIYTKAADVGADLVGKV 786
            P GAKP++LVMG C  G++VT WLA SVLSKDDGTPAMRAVSD IK          Y+AIAKI+V LL+FIV SYV+RP GSSE  N GVR +GN TLGLISG CFLVGALCSA AGY+SMWVSA+ANIRV SAARR YGEALV+CFRGGAFSAVL ITLCV GVTLLYVALY+WYVARGVL +TD+PVLMV YGFGASFVALFMQLGGGIYTKAADVGADLVGKV
Sbjct:    2 PSGAKPIILVMGCCSAGILVTGWLADSVLSKDDGTPAMRAVSDPIK----------YTAIAKIAVFLLVFIVMSYVLRPTGSSEVQNAGVRRVGNTTLGLISGACFLVGALCSAAAGYISMWVSAHANIRVASAARRGYGEALVICFRGGAFSAVLDITLCVAGVTLLYVALYTWYVARGVLDDTDVPVLMVGYGFGASFVALFMQLGGGIYTKAADVGADLVGKV 217          
BLAST of mRNA_H-elongata_contig66979.14298.1 vs. uniprot
Match: A0A6A4YUH2_9STRA (H(+)-exporting diphosphatase (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4YUH2_9STRA)

HSP 1 Score: 260 bits (665), Expect = 2.480e-82
Identity = 141/232 (60.78%), Postives = 179/232 (77.16%), Query Frame = 1
Query:   91 IVLLLVPPGAKPVVLVMGICGVGVIVTSWLAGSVLSKDDGTPAMRAVSDAIKEGAEGFLKVQYSAIAKISVILLMFIVASYVMRPAGSSETHNEGVRLIGNPTLGLISGGCFLVGALCSAGAGYVSMWVSANANIRVVSAARRSYGEALVVCFRGGAFSAVLAITLCVGGVTLLYVALYSWYVARGVLVETDMPVLMVEYGFGASFVALFMQLGGGIYTKAADVGADLVGKV 786
            ++ LL     +P+VLV+  CG G + + +L+  VLSKDDGTP MR VS  I+EGAEGFL++QY+AI++I+V L + I  SY +RP   +  H  GV  +GN TLG++    F +GA+CSA AGY+SMWVSA +NIRV SAARRSYGEAL++CFRGGAFSAVL ITLCV GV++LYV L++ +    ++  T++P+LMV YGFGASFVALFMQLGGGIYTKAADVGADLVGKV
Sbjct:   48 VIFLLFTSSFRPIVLVLTFCGYGAVFSLYLSHWVLSKDDGTPEMREVSIPIREGAEGFLRIQYTAISQIAVGLALLIFFSYSLRP---NSLHPSGVEKLGNTTLGVLGAISFALGAMCSAAAGYISMWVSAQSNIRVASAARRSYGEALLICFRGGAFSAVLDITLCVAGVSILYVLLHAAFTP--IVNATEIPMLMVGYGFGASFVALFMQLGGGIYTKAADVGADLVGKV 274          
BLAST of mRNA_H-elongata_contig66979.14298.1 vs. uniprot
Match: A0A5D6XQF5_9STRA (H(+)-exporting diphosphatase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XQF5_9STRA)

HSP 1 Score: 270 bits (691), Expect = 1.150e-81
Identity = 149/232 (64.22%), Postives = 182/232 (78.45%), Query Frame = 1
Query:   91 IVLLLVPPGAKPVVLVMGICGVGVIVTSWLAGSVLSKDDGTPAMRAVSDAIKEGAEGFLKVQYSAIAKISVILLMFIVASYVMRPAGSSETHNEGVRLIGNPTLGLISGGCFLVGALCSAGAGYVSMWVSANANIRVVSAARRSYGEALVVCFRGGAFSAVLAITLCVGGVTLLYVALYSWYVARGVLVETDMPVLMVEYGFGASFVALFMQLGGGIYTKAADVGADLVGKV 786
            ++LLL+    +PVVLV  ICG G + + +L+  VLSKDDGTP MR VS+ I+EGAEGFL++QY+AIA+I+V +   I  SY +RP  +  +   GV  +GN TLG++    F++GA+CSAGAGY++MWVSA ANIRV SAARRSYGEAL++CFRGGAFSAVL ITLCV GVT LYV LY+ + A   L  TD+P+LMV YGFGASFVALFMQLGGGIYTKAADVGADLVGKV
Sbjct:   70 LLLLLISGEFRPVVLVFTICGYGALFSLYLSHWVLSKDDGTPEMREVSNPIREGAEGFLRIQYTAIARIAVGIAGLIFFSYALRPTSALAS---GVEKLGNVTLGVLGALSFIIGAVCSAGAGYIAMWVSAQANIRVTSAARRSYGEALLICFRGGAFSAVLDITLCVAGVTALYVTLYTMFSAT--LEATDIPLLMVGYGFGASFVALFMQLGGGIYTKAADVGADLVGKV 296          
BLAST of mRNA_H-elongata_contig66979.14298.1 vs. uniprot
Match: W7T9J2_9STRA (H(+)-exporting diphosphatase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T9J2_9STRA)

HSP 1 Score: 268 bits (686), Expect = 2.740e-80
Identity = 147/247 (59.51%), Postives = 180/247 (72.87%), Query Frame = 1
Query:   46 VKTAPALGGAALTTLIVLLLVPPGAKPVVLVMGICGVGVIVTSWLAGSVLSKDDGTPAMRAVSDAIKEGAEGFLKVQYSAIAKISVILLMFIVASYVMRPAGSSETHNEGVRLIGNPTLGLISGGCFLVGALCSAGAGYVSMWVSANANIRVVSAARRSYGEALVVCFRGGAFSAVLAITLCVGGVTLLYVALYSWYVARGVLVETDMPVLMVEYGFGASFVALFMQLGGGIYTKAADVGADLVGKV 786
            V   P      L  L+  +++P   +  V ++ IC +G +   WL+  VLSKDDG+  MRAV+  I+EGAEGFL+VQYSAIAKI+V+L + I  SY+MRP G    H  GV  +GN  LGL+    F++GALCSA AGY+SMWV+A+ N+RV SAARRSY +AL+VCF GGAFSAVL ITLCV GVT LY+ LY  +V  GVL   ++P+LMV YGFGASFVALFMQLGGGIYTKAADVGADLVGKV
Sbjct:  164 VNVGPTASFICLAGLLCFIVLPANFRCAVFILTICALGTLFAFWLSRFVLSKDDGSAEMRAVATPIREGAEGFLRVQYSAIAKIAVVLSILITLSYMMRPEGGGGNH--GVGKLGNTMLGLLGSISFILGALCSAAAGYLSMWVAAHTNVRVTSAARRSYMQALIVCFNGGAFSAVLDITLCVAGVTCLYLGLYLVFVPAGVLHAGEVPMLMVGYGFGASFVALFMQLGGGIYTKAADVGADLVGKV 408          
BLAST of mRNA_H-elongata_contig66979.14298.1 vs. uniprot
Match: A0A067CMP9_SAPPC (H(+)-exporting diphosphatase n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CMP9_SAPPC)

HSP 1 Score: 265 bits (677), Expect = 6.440e-80
Identity = 140/222 (63.06%), Postives = 176/222 (79.28%), Query Frame = 1
Query:  121 KPVVLVMGICGVGVIVTSWLAGSVLSKDDGTPAMRAVSDAIKEGAEGFLKVQYSAIAKISVILLMFIVASYVMRPAGSSETHNEGVRLIGNPTLGLISGGCFLVGALCSAGAGYVSMWVSANANIRVVSAARRSYGEALVVCFRGGAFSAVLAITLCVGGVTLLYVALYSWYVARGVLVETDMPVLMVEYGFGASFVALFMQLGGGIYTKAADVGADLVGKV 786
            +P+VLV+  CG GV+ + +L   VL+KDDGTP MR VS  I+EGAEGFL++QY+AI++I++ L + I  SY +R   ++  H  GV ++GN  LG++    FL+GA+CSAGAGY+SMWVSA +NIRV SAARRSYGEAL++CFRGGAFSAVL ITLCV GV++LYV LY  + +   +  TD+P+LMV YGFGASFVALFMQLGGGIYTKAADVGADLVGKV
Sbjct:   50 RPLVLVLTFCGYGVLFSIYLCNWVLAKDDGTPEMREVSTPIREGAEGFLRIQYAAISRIAIGLALLIFFSYALR---TTSAHATGVEVLGNYMLGVLGAASFLLGAVCSAGAGYISMWVSAQSNIRVTSAARRSYGEALLICFRGGAFSAVLDITLCVAGVSILYVVLYMLFGSS--VAATDIPMLMVGYGFGASFVALFMQLGGGIYTKAADVGADLVGKV 266          
BLAST of mRNA_H-elongata_contig66979.14298.1 vs. uniprot
Match: M4BX10_HYAAE (H(+)-exporting diphosphatase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BX10_HYAAE)

HSP 1 Score: 264 bits (675), Expect = 1.750e-79
Identity = 151/239 (63.18%), Postives = 183/239 (76.57%), Query Frame = 1
Query:   73 AALTTLIVLLLVPPGA-KPVVLVMGICGVGVIVTSWLAGSVLSKDDGTPAMRAVSDAIKEGAEGFLKVQYSAIAKISVILLMFIVASYVMRPAGSSETHNEGVRLIGNPTLGLISGGCFLVGALCSAGAGYVSMWVSANANIRVVSAARRSYGEALVVCFRGGAFSAVLAITLCVGGVTLLYVALYSWYVARGVLVETDMPVLMVEYGFGASFVALFMQLGGGIYTKAADVGADLVGKV 786
            AA++    LLL+  G+ +P+ LV  ICG G + + +L+  VLSKD GT  M+ V+  I++GAEGFLK+QY+AIA+I+V +   I  SY +RP   S T + GV  +GN TLGL+S   FL+GALCSA AGYVSMWVSA +NIRV SAARRSYGEAL+VCFRGGAFSAVL ITLCVGGVT LYV LY  +    +L  T++P+LMV YGFGASFVALFMQLGGGIYTKAADVGADLVGK+
Sbjct:   51 AAISAFGALLLLFGGSFRPIFLVFAICGYGAVFSLYLSHWVLSKDSGTVEMKEVAMPIRQGAEGFLKIQYTAIARIAVAIAGLIFLSYTLRP---SNTLSSGVETLGNITLGLVSSVAFLIGALCSAAAGYVSMWVSARSNIRVASAARRSYGEALLVCFRGGAFSAVLDITLCVGGVTSLYVILYVLF--GSLLRPTEVPLLMVGYGFGASFVALFMQLGGGIYTKAADVGADLVGKI 284          
BLAST of mRNA_H-elongata_contig66979.14298.1 vs. uniprot
Match: A0A662WVK4_9STRA (H(+)-exporting diphosphatase n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WVK4_9STRA)

HSP 1 Score: 259 bits (663), Expect = 1.010e-77
Identity = 149/241 (61.83%), Postives = 182/241 (75.52%), Query Frame = 1
Query:   64 LGGAALTTLIVLLLVPPGAKPVVLVMGICGVGVIVTSWLAGSVLSKDDGTPAMRAVSDAIKEGAEGFLKVQYSAIAKISVILLMFIVASYVMRPAGSSETHNEGVRLIGNPTLGLISGGCFLVGALCSAGAGYVSMWVSANANIRVVSAARRSYGEALVVCFRGGAFSAVLAITLCVGGVTLLYVALYSWYVARGVLVETDMPVLMVEYGFGASFVALFMQLGGGIYTKAADVGADLVGKV 786
            LG +A+ TL  LLL     +P+ LV  ICG G + + +L+  VL++D GT  MR V+  I+EGAEGFL++QY+AIA+I+V +   I  SY +RP   + T   GV  +GN TLG+++   FL+GA+CSA AGYVSMWVSA +NIRV SAARRSYGEAL+VCFRGGAFSAVL ITLCVGGV+ LYV+LY  +     L  TD+P+LMV YGFGASFVALFMQLGGGIYTKAADVGADLVGKV
Sbjct:   48 LGVSAVGTL--LLLFGGSFRPIFLVFTICGFGALFSLYLSHWVLARDSGTAEMREVATPIREGAEGFLRIQYTAIARIAVGIAGLIFFSYALRP---TSTLGTGVEALGNVTLGVVASVAFLIGAVCSAAAGYVSMWVSAQSNIRVASAARRSYGEALLVCFRGGAFSAVLDITLCVGGVSALYVSLYMLF--GSYLRATDIPLLMVGYGFGASFVALFMQLGGGIYTKAADVGADLVGKV 281          
BLAST of mRNA_H-elongata_contig66979.14298.1 vs. uniprot
Match: A0A485LV04_9STRA (H(+)-exporting diphosphatase n=17 Tax=Aphanomyces TaxID=100860 RepID=A0A485LV04_9STRA)

HSP 1 Score: 259 bits (662), Expect = 1.120e-77
Identity = 140/222 (63.06%), Postives = 172/222 (77.48%), Query Frame = 1
Query:  121 KPVVLVMGICGVGVIVTSWLAGSVLSKDDGTPAMRAVSDAIKEGAEGFLKVQYSAIAKISVILLMFIVASYVMRPAGSSETHNEGVRLIGNPTLGLISGGCFLVGALCSAGAGYVSMWVSANANIRVVSAARRSYGEALVVCFRGGAFSAVLAITLCVGGVTLLYVALYSWYVARGVLVETDMPVLMVEYGFGASFVALFMQLGGGIYTKAADVGADLVGKV 786
            +P+VLV   CG G + + +L   VLSKDDGTP MR VS  I+EGAEGFL++QY+AI++I+V L   I  SY +RP   +  H  GV  +GN  LG++    F +GA+CSAGAGY+SMWVSA +NIRV SAARRSYGEAL++CFRGGAFSAVL ITLCV GV+LLYV L++ +    ++  T++P+LMV YGFGASFVALFMQLGGGIYTKAADVGADLVGKV
Sbjct:   57 RPIVLVFTFCGYGAVFSLYLCNWVLSKDDGTPEMREVSTPIREGAEGFLRIQYTAISQIAVGLAALIFFSYSLRP---NSVHASGVEKLGNTMLGVLGAISFALGAVCSAGAGYISMWVSAQSNIRVASAARRSYGEALLICFRGGAFSAVLDITLCVAGVSLLYVLLHAAFTP--IVHATEIPMLMVGYGFGASFVALFMQLGGGIYTKAADVGADLVGKV 273          
BLAST of mRNA_H-elongata_contig66979.14298.1 vs. uniprot
Match: A0A8K1CNE4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CNE4_PYTOL)

HSP 1 Score: 259 bits (661), Expect = 1.700e-77
Identity = 142/231 (61.47%), Postives = 178/231 (77.06%), Query Frame = 1
Query:   94 VLLLVPPGAKPVVLVMGICGVGVIVTSWLAGSVLSKDDGTPAMRAVSDAIKEGAEGFLKVQYSAIAKISVILLMFIVASYVMRPAGSSETHNEGVRLIGNPTLGLISGGCFLVGALCSAGAGYVSMWVSANANIRVVSAARRSYGEALVVCFRGGAFSAVLAITLCVGGVTLLYVALYSWYVARGVLVETDMPVLMVEYGFGASFVALFMQLGGGIYTKAADVGADLVGKV 786
            V LL     +P+ LV+  CG G + + +L+  VLSKDDGTP MR VS+ I+EGAEGFL++QY+AI++I+V +   I  SY +RP+ +  +   GV  +GN TLG++    F++GA+CSA AGY+SMWVSA +NIRV SAARRSYGEAL++CFRGGAFSAVL ITLCV GV++LYV LY  + +   L  TD+P+LMV YGFGASFVALFMQLGGGIYTKAADVGADLVGKV
Sbjct:   47 VFLLFSSDFRPIFLVLTFCGYGALFSFYLSHWVLSKDDGTPEMREVSNPIREGAEGFLRIQYTAISRIAVGIAGLIFFSYALRPSSALAS---GVETLGNMTLGVLGSLSFVIGAVCSAAAGYISMWVSAQSNIRVTSAARRSYGEALLICFRGGAFSAVLDITLCVAGVSILYVVLYVMFGSYVAL--TDIPMLMVGYGFGASFVALFMQLGGGIYTKAADVGADLVGKV 272          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig66979.14298.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6Z6_ECTSI3.930e-12778.99H(+)-exporting diphosphatase n=1 Tax=Ectocarpus si... [more]
A0A6H5KNP5_9PHAE1.070e-11178.76H(+)-exporting diphosphatase n=1 Tax=Ectocarpus sp... [more]
A0A6A4YUH2_9STRA2.480e-8260.78H(+)-exporting diphosphatase (Fragment) n=1 Tax=Ap... [more]
A0A5D6XQF5_9STRA1.150e-8164.22H(+)-exporting diphosphatase n=1 Tax=Pythium brass... [more]
W7T9J2_9STRA2.740e-8059.51H(+)-exporting diphosphatase n=2 Tax=Monodopsidace... [more]
A0A067CMP9_SAPPC6.440e-8063.06H(+)-exporting diphosphatase n=4 Tax=Saprolegniace... [more]
M4BX10_HYAAE1.750e-7963.18H(+)-exporting diphosphatase n=1 Tax=Hyaloperonosp... [more]
A0A662WVK4_9STRA1.010e-7761.83H(+)-exporting diphosphatase n=2 Tax=Nothophytopht... [more]
A0A485LV04_9STRA1.120e-7763.06H(+)-exporting diphosphatase n=17 Tax=Aphanomyces ... [more]
A0A8K1CNE4_PYTOL1.700e-7761.47Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig66979contigH-elongata_contig66979:666..3063 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score386.3
Seed ortholog evalue1.1e-104
Seed eggNOG ortholog2880.D7G6Z6
KEGG koko:K01507
KEGG Pathwayko00190,map00190
EggNOG free text desc.hydrogen-translocating pyrophosphatase activity
EggNOG OGs2QPJC@2759,COG3808@1
Ec32 ortholog descriptionvacuolar-type H -translocating inorganic pyrophosphatase
Ec32 orthologEc-01_011640.1
EC3.6.1.1
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categorysignal peptide
Exons4
Model size786
Cds size786
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig66979.14298.1prot_H-elongata_contig66979.14298.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig66979 666..3063 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931059.4335833-CDS-H-elongata_contig66979:665..9111622931059.4335833-CDS-H-elongata_contig66979:665..911Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig66979 666..911 +
1691679681.1000404-CDS-H-elongata_contig66979:665..9111691679681.1000404-CDS-H-elongata_contig66979:665..911Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig66979 666..911 +
1622931059.4523802-CDS-H-elongata_contig66979:1393..16171622931059.4523802-CDS-H-elongata_contig66979:1393..1617Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig66979 1394..1617 +
1691679681.113454-CDS-H-elongata_contig66979:1393..16171691679681.113454-CDS-H-elongata_contig66979:1393..1617Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig66979 1394..1617 +
1622931059.472738-CDS-H-elongata_contig66979:2138..23941622931059.472738-CDS-H-elongata_contig66979:2138..2394Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig66979 2139..2394 +
1691679681.1259274-CDS-H-elongata_contig66979:2138..23941691679681.1259274-CDS-H-elongata_contig66979:2138..2394Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig66979 2139..2394 +
1622931059.4914572-CDS-H-elongata_contig66979:3003..30631622931059.4914572-CDS-H-elongata_contig66979:3003..3063Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig66979 3004..3063 +
1691679681.1339214-CDS-H-elongata_contig66979:3003..30631691679681.1339214-CDS-H-elongata_contig66979:3003..3063Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig66979 3004..3063 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig66979.14298.1

>prot_H-elongata_contig66979.14298.1 ID=prot_H-elongata_contig66979.14298.1|Name=mRNA_H-elongata_contig66979.14298.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=262bp
APSQPRYAVNYPKLPVKTAPALGGAALTTLIVLLLVPPGAKPVVLVMGIC
GVGVIVTSWLAGSVLSKDDGTPAMRAVSDAIKEGAEGFLKVQYSAIAKIS
VILLMFIVASYVMRPAGSSETHNEGVRLIGNPTLGLISGGCFLVGALCSA
GAGYVSMWVSANANIRVVSAARRSYGEALVVCFRGGAFSAVLAITLCVGG
VTLLYVALYSWYVARGVLVETDMPVLMVEYGFGASFVALFMQLGGGIYTK
AADVGADLVGKV
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mRNA from alignment at H-elongata_contig66979:666..3063+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig66979.14298.1 ID=mRNA_H-elongata_contig66979.14298.1|Name=mRNA_H-elongata_contig66979.14298.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2398bp|location=Sequence derived from alignment at H-elongata_contig66979:666..3063+ (Himanthalia elongata Himel1 dioecious)
GCTCCGTCGCAGCCTCGATACGCTGTCAATTACCCAAAGCTGCCGGTCAA AACCGCTCCGGCTCTGGGCGGCGCCGCGCTGACGACCCTGATCGTCCTGC TGCTAGTACCGCCGGGGGCCAAGCCAGTTGTCTTGGTAATGGGCATCTGC GGCGTGGGCGTGATCGTGACCTCCTGGCTGGCGGGCAGCGTGCTAAGTAA GGATGACGGGACGCCGGCGATGCGCGCGGTGTCCGACGCGATCAAGGTGC GTGCTGCTGTGAGGAAGACAGCCCCAGGATGGGGGAGGAGGAGGGCAACG GGCGGGGTGGAGATCTGTGAGGCTGATGCGACCCCCGAAACGTTTAGTCT ATGACTCTGTCGGAATTTTTTTCCATACGATACGAATATTTTCAGAAAAT AAAGAGGGTGAGGGGAGGCAGGGGTGCTCAAAATATGCATGTCTTAGCTT TTAAACCATTCGGGTGGAGTGGTGGGGGGGGGTCGAAAGAAGGTCTAAAG GGTGGAATGCCCCGAGAAACGAGAGAGAGCGTTTGTTCGTTCGTTTGTCG TCACATTGTCATTGTCGTGGACGGATCCCGAATATCCCGAATGGCGACGA ATGGCGACGGAGCTCCCCCTCCCCCTCCCCATCTCATTTGGCGTCGGCCT TTCCGACCCTTTTTTCCCTATATTTTAAATGTTATTATTATTGGTGATGG TGCCTCGCTCGCTCGGTCGAGGGAACAGGAAGGGGCTGAGGGTTTCCTCA AGGTGCAGTACTCTGCTATCGCGAAGATCTCCGTGATCCTGCTGATGTTC ATCGTGGCGAGCTACGTAATGCGGCCGGCGGGTTCATCAGAGACACATAA CGAGGGAGTCCGACTGATAGGCAACCCGACCCTGGGGCTCATCAGCGGGG GCTGTTTCCTTGTGGGAGCTCTTTGCTCCGCCGGGGCCGGATACGTCAGC ATGTGAGTGTAGCTATGTGCCGTCGTTGGAGGGTGGGGTTTTCTCAAATT CATTGCCTCTGGCTCTTGACGAGGAGGCGGTGGTCTCGCGAGGGTGATCC CTTAAATTTTGCTCGTGTTGACGCCTATATAGACGTGTATGGTCATTTAT AATCGTCGAAGCAGGCCGACACACGAAAACTTGCCCTATATCATATACAC AGACTACGAGTATACTATACTTAATATTATGTCTCTCGCTCTTTAAAAAA AAATGTACGTACATAGCTTTCATCGTTCTACTTTCCCCTCCCCTTAAAAC CCATTCTGTGATCACCTCTGGGGCTTTCCTGCTCACTGGTACTGTTACCG ACGGAGGATTTTTGTTACTGTTATTGGGGCGTAGTTCCGTCTCACCGTTA CCGACGGAGAATTATGATGCGAATGCCGACCAGGAGAGCTACGGCTGTTC ACCTGTTTTGGCGCTGTGTGCTGTTATTCATCGACTATTACGCGCCCCAC CTCCGCCATTCGTCCTCGCGCAGGTGGGTCAGCGCGAACGCTAACATCCG GGTGGTGAGCGCCGCGCGACGGAGCTACGGGGAGGCTCTCGTGGTCTGCT TCCGCGGCGGGGCTTTCTCCGCCGTCTTGGCCATCACGCTGTGCGTGGGC GGGGTGACGCTTCTGTACGTGGCCCTCTACTCGTGGTACGTGGCGAGAGG GGTGCTAGTGGAGACCGACATGCCTGTCCTCATGGTGGAGTACGGCTTCG GGGCGTCGTTCGTGGCGCTGTTCATGCAGGTGAGGCTTGTCTGGAAGGCG TTTTCGTCCAGCTGGATCTGCTTCGGTTTCACCCCGCGTTGTCGTGTCCT GTACAGAAGAAGCAGTCGAATCTGGTTCAAGGAACGATGCTACGTGGTAG CGTTGGATGAAAGTCTGCCGCGGTCGTCCATTTACACCCCACCCTCCCAC CGACTGGGCTAACAGCTAAGGGCATGCGAATGTTGAGTACCCCTCCTCCC CCCACTCCTCCCCATGCATACATTACACATTGTTCAAAATGTCATTTATG TTTTTGCCAGACTCAGCGGTATATGTGAATTTGTGGTCTTGTCGCTCGAG AAAGAAAAGACAGAGGTTGACCAAGTAATTAAGAATCATGTTACGTACCG TAAACGATACCGTTACGTAGCCGCTCAAGGATGCACTACTCGGCGATTGG GATCCATTACAGGCTGATCGGCACGCTCGTCCCCTCTTGTGTAGTATAGA CGTGAAGATCGATGACTGTACATCAAGACGACAGTGTTGGGTGGTGGGAT GGTTACGATAGCTTCGTAACTGATAATATCCACGCACGTCGATGGGTGAT CAAAAATACGATTCGTGTCGATCCTGCCGCGACGACAGCTGGGCGGTGGC ATCTACACGAAGGCGGCGGACGTCGGGGCGGACCTCGTTGGCAAGGTG
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Coding sequence (CDS) from alignment at H-elongata_contig66979:666..3063+

>mRNA_H-elongata_contig66979.14298.1 ID=mRNA_H-elongata_contig66979.14298.1|Name=mRNA_H-elongata_contig66979.14298.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1572bp|location=Sequence derived from alignment at H-elongata_contig66979:666..3063+ (Himanthalia elongata Himel1 dioecious)
GCTCCGTCGCAGCCTCGATACGCTGTCAATTACCCAAAGCTGCCGGTCAA
AACCGCTCCGGCTCTGGGCGGCGCCGCGCTGACGACCCTGATCGTCCTGC
TGCTAGTACCGCCGGGGGCCAAGCCAGTTGTCTTGGTAATGGGCATCTGC
GGCGTGGGCGTGATCGTGACCTCCTGGCTGGCGGGCAGCGTGCTAAGTAA
GGATGACGGGACGCCGGCGATGCGCGCGGTGTCCGACGCGATCAAGGCTC
CGTCGCAGCCTCGATACGCTGTCAATTACCCAAAGCTGCCGGTCAAAACC
GCTCCGGCTCTGGGCGGCGCCGCGCTGACGACCCTGATCGTCCTGCTGCT
AGTACCGCCGGGGGCCAAGCCAGTTGTCTTGGTAATGGGCATCTGCGGCG
TGGGCGTGATCGTGACCTCCTGGCTGGCGGGCAGCGTGCTAAGTAAGGAT
GACGGGACGCCGGCGATGCGCGCGGTGTCCGACGCGATCAAGGAAGGGGC
TGAGGGTTTCCTCAAGGTGCAGTACTCTGCTATCGCGAAGATCTCCGTGA
TCCTGCTGATGTTCATCGTGGCGAGCTACGTAATGCGGCCGGCGGGTTCA
TCAGAGACACATAACGAGGGAGTCCGACTGATAGGCAACCCGACCCTGGG
GCTCATCAGCGGGGGCTGTTTCCTTGTGGGAGCTCTTTGCTCCGCCGGGG
CCGGATACGTCAGCATGAAGGGGCTGAGGGTTTCCTCAAGGTGCAGTACT
CTGCTATCGCGAAGATCTCCGTGATCCTGCTGATGTTCATCGTGGCGAGC
TACGTAATGCGGCCGGCGGGTTCATCAGAGACACATAACGAGGGAGTCCG
ACTGATAGGCAACCCGACCCTGGGGCTCATCAGCGGGGGCTGTTTCCTTG
TGGGAGCTCTTTGCTCCGCCGGGGCCGGATACGTCAGCATGTGGGTCAGC
GCGAACGCTAACATCCGGGTGGTGAGCGCCGCGCGACGGAGCTACGGGGA
GGCTCTCGTGGTCTGCTTCCGCGGCGGGGCTTTCTCCGCCGTCTTGGCCA
TCACGCTGTGCGTGGGCGGGGTGACGCTTCTGTACGTGGCCCTCTACTCG
TGGTACGTGGCGAGAGGGGTGCTAGTGGAGACCGACATGCCTGTCCTCAT
GGTGGAGTACGGCTTCGGGGCGTCGTTCGTGGCGCTGTTCATGCAGGTGG
GTCAGCGCGAACGCTAACATCCGGGTGGTGAGCGCCGCGCGACGGAGCTA
CGGGGAGGCTCTCGTGGTCTGCTTCCGCGGCGGGGCTTTCTCCGCCGTCT
TGGCCATCACGCTGTGCGTGGGCGGGGTGACGCTTCTGTACGTGGCCCTC
TACTCGTGGTACGTGGCGAGAGGGGTGCTAGTGGAGACCGACATGCCTGT
CCTCATGGTGGAGTACGGCTTCGGGGCGTCGTTCGTGGCGCTGTTCATGC
AGCTGGGCGGTGGCATCTACACGAAGGCGGCGGACGTCGGGGCGGACCTC
GTTGGCAAGGTGCTGGGCGGTGGCATCTACACGAAGGCGGCGGACGTCGG
GGCGGACCTCGTTGGCAAGGTG
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