mRNA_H-elongata_contig66748.14276.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig66748.14276.1 vs. uniprot
Match: D7FKG3_ECTSI (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKG3_ECTSI) HSP 1 Score: 443 bits (1139), Expect = 5.120e-143 Identity = 257/536 (47.95%), Postives = 306/536 (57.09%), Query Frame = 2
Query: 2 SSGDVDDKTEERREFKRDFLAMLEARIFEIQERGRGVLLVGDLNSCASQMDHGFAMTHAEFIDSNWSKWIRGILGLNSPDPPRLIDCFRRLHPDRQNAFTCWNTVTGARENNYGTRIDYILAGATFAEEALEGCDIMPQFLGSDHCPVRAAFNISSTAGCRAE---RQSGVENSRVFHAEEWPEHPPECSCFYVELTTRQEKLAKYFVTGGSNSVAPAGMSTEGAVNGVARE---AQDHERRSPSMGAREGIGGEYRGSQQMTLIGVAQGFEGIGRHEARRKRPVNVGRHEERLPNGREAQVRRNIGSNRARQSKLTFACVSNRAISGDSAKPRTSPTGHVGEHQKCEDGLAQGVKGNTEGNRVADSINHK-----------------------------REPDSAEGGSNSRSK-------------GVSAG----------------VWNSIFGRNKNTPSCKHGEPSIQRTVQKAGPNQHRRFYTCARSAGNWPIDRNARCNFFQWRLDGVKGYKGQP---QADSNSKKQRRV 1408
SS D +KTE+RR FKRDFLA LEARIFEI+ RGRGV+LVGDLN+CASQ+DHGF MT +EF SNWSKWIRG+LGL SP+PPRL+DCFR LHPDR++AFTCWNT TGAR+NNYGTRIDYI+AG FA+ AL CDIMP FLGSDHCPVRA F AG A+ G E +R A EWPEHPPECSCFY ELT +QEKLAKYFV GG N + G +GA + R+ A++ P+ G +G+ R + G G G R K+ +VGR +G + R GS +RQSKL F +N +S TS E +G G EG + N + + A GGS S S GV G W +IFGR K+ P+C+HGEPSIQRTV K GPN +RRFYTCARSAGNWP DRNARC FFQWR DGV+GYK +P + +NS K+RR
Sbjct: 169 SSDDEKEKTEDRRAFKRDFLATLEARIFEIRSRGRGVVLVGDLNACASQLDHGFTMTDSEFYASNWSKWIRGMLGLGSPEPPRLVDCFRHLHPDRKSAFTCWNTQTGARDNNYGTRIDYIIAGTDFADRALRACDIMPDFLGSDHCPVRARFAFPLAAGLAADAPGESEGDEIARSRSASEWPEHPPECSCFYPELTAKQEKLAKYFVAGGQNEESAVGTEGKGADGRLVRDGNGARESGATRPAAGGGKGVAAFMRALPGAGVTGK-DGASVAGSLMMRGKKVGSVGRTSSTSSSGGGSLTARRPGSGGSRQSKLAFGPAANGNVS-------TSAGATSREATAGGNGAGSGTSRRAEGTVPLRTCNQRGXXXXXXXXAQTSQAIQPPRSRVHASGGGHDTAGAGGGSGSVSTIGSCRLSNPGGEGGVETGPGEGPNGGGGSRDSAEAWKAIFGRKKSAPTCEHGEPSIQRTVLKPGPNHNRRFYTCARSAGNWPTDRNARCTFFQWRRDGVRGYKDKPPRAEGGTNSNKKRRT 696
BLAST of mRNA_H-elongata_contig66748.14276.1 vs. uniprot
Match: A0A6H5KUC8_9PHAE (DNA-(apurinic or apyrimidinic site) endonuclease 2 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUC8_9PHAE) HSP 1 Score: 381 bits (979), Expect = 4.110e-119 Identity = 224/486 (46.09%), Postives = 269/486 (55.35%), Query Frame = 2
Query: 119 VGDLNSCASQMDHGFAMTHAEFIDSNWSKWIRGILGLNSPDPPRLIDCFRRLHPDRQNAFTCWNTVTGARENNYGTRIDYILAGATFAEEALEGCDIMPQFLGSDHCPVRAAFNISSTAGCRAE---RQSGVENSRVFHAEEWPEHPPECSCFYVELTTRQEKLAKYFVTGGSNSVAPAGMSTEGAVN---GVAREAQDHERRSPSMGAREGIGGEYRGSQQMTLIGVAQGFEGIGRHEARRKRPVNVGRHEERLPNGREAQVRRNIGSNRARQSKLTFACVSNRAISGDS-AKPRTSPTGHVGE---HQKCEDGLAQGVKGNTE----GNRVADSINHKREPDSAEGGSNSRSKGV---------------------------------------SAGVWNSIFGRNKNTPSCKHGEPSIQRTVQKAGPNQHRRFYTCARSAGNWPIDRNARCNFFQWRLDGVKGYKGQP---QADSNSKKQRRV 1408
VGDLN+CASQ+DHGF MT +EF SNWSKWIRG+LGL SP+PPRL+DCFR LHPDR+ AFTCWNT TGAR+NNYGTRIDYI+AG FA+ AL CDIMP FLGSDHCPVRA F G A+ + G E +R E PEHPPECSCFY ELT +QEKLAKYFV GG N + G +GA + G A P+ G R G+ R + G G G R K+ + GR GS +RQSKL F V+N +S + A R +P G GE ++ +G GN G + + +I R A GG + + SA W +IFGR K+ P+C+HGEPSIQRTV K GPN +RRFYTCARSAGNWP DRNARC FFQWR DGV+GYK +P + SN+ K+RR
Sbjct: 221 VGDLNACASQLDHGFTMTDSEFYASNWSKWIRGMLGLGSPEPPRLVDCFRHLHPDRKGAFTCWNTQTGARDNNYGTRIDYIIAGTDFADRALRACDIMPDFLGSDHCPVRARFAFPLAVGLAADAPGKSEGDEIARSRSESELPEHPPECSCFYPELTAKQEKLAKYFVAGGQNEESAVGTEGKGAYDRLIGDRNGAGASGVTRPAAGGRRGVVAFMRALPGTGVTGK-DGAGVAGSLMMRAKKVGSAGRTSXXXXXXXXXXXXXRPGSGGSRQSKLAFGPVANDNVSTSAGAASREAPAGGRGEVSGTRRRAEGAVPLRTGNERAGGGGAQTSQAIQPPRSTVHASGGGHDTAGAXXXXXSVSTIGSSRISKPXXXXXVDTGSGEGPNGAGGSRDSAEAWKAIFGRKKSAPTCEHGEPSIQRTVLKPGPNHNRRFYTCARSAGNWPTDRNARCTFFQWRRDGVRGYKDKPPRAEGGSNNIKKRRT 705
BLAST of mRNA_H-elongata_contig66748.14276.1 vs. uniprot
Match: A0A835ZDF2_9STRA (DNA-(apurinic or apyrimidinic site) endonuclease 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDF2_9STRA) HSP 1 Score: 180 bits (456), Expect = 2.010e-44 Identity = 159/568 (27.99%), Postives = 208/568 (36.62%), Query Frame = 2
Query: 5 SGDVDDKTEERREFKRDFLAMLEARIFEIQERGRGVLLVGDLNSCASQMDHGFAMTHAEFIDSNWSKWIRGILGLNSPDPPR-------------------------------------------------------LIDCFRRLHPDRQNAFTCWNTVTGARENNYGTRIDYILAGATFAEEALEGCDIMPQFLGSDHCPVRAAFNISSTAGCRAERQSGVENSRVFHAEEWPEHPPECSCFYVELTTRQEKLAKYFV-----------------TGGSNSVAPAGMSTEGAVNG---------------VAREAQDHERRSPSM--GAREGIGGEYRGSQQMTLIGV--AQGFE-------GIGRHEARRKRPVNVGRHEERLPNGREAQVRRNIGSNRARQSKLTFACVSNRAISGDSAKPRTSPTGHVGEHQKCEDGLAQGVKGNTEGNRVADSINHKREPDSAEGGSNSRSKGVSA-GVWNSIFGRNKNTPSCK-HGEPSIQRTVQKAGPNQHRRFYTCARSAGNWPIDRNARCNFFQWRLDGVKGYKGQPQADSNSKKQRRV 1408
SG+ + EERR FKRDF A LEAR ++ GR V+L GDLN+CAS DH FAM+ A+F+ S WS+WIR +LG + +DCFRR +P + AFTCWNT GAR NNYGTRIDY+LA A FA AL I P +GSDHCPV A F+ A HPP+CSCF + KL +F ++ P ++ E A +E QD P + + + GS GV AQGF G + G+ R S + S GV A W ++ + + P C H EP+++RTV KAGPNQ RRFY CAR G+WP D NARCN+F++R G +GY+ AD+ ++ Q+R
Sbjct: 143 SGEDAARAEERRHFKRDFNAALEARARQLVRAGRHVVLAGDLNACASPRDHCFAMSEADFLASPWSRWIRRMLGRSLESAAADGDDGDGDSYALSNGASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFVDCFRRANPAAERAFTCWNTKKGARANNYGTRIDYVLASAAFARAALRASAIWPHVVGSDHCPVVATFDAPRAHAAAAAAP----------------HPPQCSCFLAAVAV--PKLTAFFAPTRVRSGXXXXXXXXXDNASDSASQPPELACEAAEEDSTLSCEALFDVPAARFVQEPQDPILPPPCIPRAGATAVAPFFSGSSGGGANGVPRAQGFTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRGMTQMTLKAFGAAAPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGRGSDASRAGSSGVDAKSAWQALLAK-RPPPVCSGHREPAVERTVLKAGPNQGRRFYCCARGEGDWPKDPNARCNYFEFRESGARGYR----ADARARDQQRA 687
BLAST of mRNA_H-elongata_contig66748.14276.1 vs. uniprot
Match: A0A6I9NNE1_9TELE (DNA-(apurinic or apyrimidinic site) endonuclease n=4 Tax=Notothenioidei TaxID=8205 RepID=A0A6I9NNE1_9TELE) HSP 1 Score: 177 bits (448), Expect = 4.650e-44 Identity = 137/466 (29.40%), Postives = 215/466 (46.14%), Query Frame = 2
Query: 14 VDDKTEERREFKRDFLAMLEARIFEIQERGRGVLLVGDLNSCASQMDHGFAMTHAEFIDSNWSKWIRGILG-------------LNSPDPP---RLIDCFRRLHPDRQNAFTCWNTVTGARENNYGTRIDYILAGATFAEEALEGCDIMPQFLGSDHCPVRAAFNISSTAGCRAERQSGVENSRVFHAEEWPEHPPECSCFYVELTTRQEKLAKYFVTGGSNSVAPAGMSTEGAVNGVAREAQDHERRSPSMGAREGIGGEYRGSQQMTLIGVAQGFEGIGRHEARRKRPVN--VGRHEERLPNGR---EAQVRRNIGSNRARQSKLTFACVSNRAISGDSAKPRTSPTGHVGEHQKCEDG---LAQGVKGNTEGNRVADSINHKREPDSAEGGSNSRSKGVSAGVWNSIFGRNKNTPSCK-HGEPSIQRTVQKAGPNQHRRFYTCARSAGNWPIDRNARCNFFQW 1336
D + ER++FK F +L++R I + G V+++GD+N+ Q+DH +F+++ KW+ G L + S DP + +D FR HP R +AFTCW+T+TGAR+ NYGTRIDYI A A+E DIMP+ GSDHCPV + S +A PP C+C+ E +Q+KL+++FV ++ A+ G E + E PS G S + L+ + G+ +P + + +LP EA ++ +G++ K+T + S +A + ++K +S T + +D L +K + +N K + +GG + KG S G W S+ PSCK H EP + RTV+K GPN ++F+ CAR G+ + +ARC+FF W
Sbjct: 145 ADPEKPERKQFKLQFYKLLQSRAEAILKDGSHVIVLGDVNTSHRQIDHCDPSDIEDFVENPGRKWLNGFLHSETNEEEPKEEPEVTSSDPVHGGKFMDTFRHFHPTRTSAFTCWSTMTGARQTNYGTRIDYIFADCQLAKEQFVAADIMPEVEGSDHCPVWGKLSCSLLPSSKA--------------------PPFCTCYLPEFAGKQQKLSRFFVKVDQKTIQSEHRE---ALPGSQEEEELRENLKPS--------GAGNASGKKRLLTTSDSVVPKGKKAKTCPKPQGSLLSFFKPKLPTAAPSTEAPEKKTLGTD-----KVTSSQNSQKACT--TSKDTSSVTSSETVPELLDDASPKLCTSMKSDKP-------MNLKPLAPAPDGGESGAKKGASLGFWKSVLHGPPPPPSCKVHREPCVLRTVKKEGPNMGKQFFVCARPQGH-ASNPDARCSFFAW 564
BLAST of mRNA_H-elongata_contig66748.14276.1 vs. uniprot
Match: A0A3Q1KFB8_ANATE (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Anabas testudineus TaxID=64144 RepID=A0A3Q1KFB8_ANATE) HSP 1 Score: 167 bits (422), Expect = 1.550e-40 Identity = 136/468 (29.06%), Postives = 206/468 (44.02%), Query Frame = 2
Query: 14 VDDKTEERREFKRDFLAMLEARIFEIQERGRGVLLVGDLNSCASQMDHGFAMTHAEFIDSNWSKWIRGIL-------GLNSPDPP--------------RLIDCFRRLHPDRQNAFTCWNTVTGARENNYGTRIDYILAGATFAEEALEGCDIMPQFLGSDHCPVRAAFNISSTAGCRAERQSGVENSRVFHAEEWPEHPPECSCFYVELTTRQEKLAKYFVTGGSNSVAPAGMSTEGAVNGVAREAQDHERRSPSMGAREGIGGEYRGSQQMTLIGVAQGFEGIGRHEARRKRPVNVGRHEERLPNGR-----EAQVRRNIGSNRARQSKLTFACVSNRAISGDSAKPRTSPTGHVGEHQKCEDGLAQGVKGNTEGNRVADSINHKREPDSAEGGSNSRSKGVSAGVWNSIFGRNKNTPSCK-HGEPSIQRTVQKAGPNQHRRFYTCARSAGNWPIDRNARCNFFQW 1336
D + ER++FK F +L+ R I + G V+++GD+N+ +DH +F ++ KW+ L N+ DP + +D FR HP R NAFTCW+T+TGAR+ NYGTRIDY+ A A+E DIMP+ GSDHCPV + P+ PP C+C+ E +Q+KL+++ V SV A+ G + + E +PS A E + S++ LI + +G +A+ + + P G + ++ + S+ A T + +++ S K +S TG V E + L +G N V + I K G ++ K S W S+ PSCK HGEP + RTV+K GPN ++F+ CAR G+ + ARCNFF W
Sbjct: 145 ADPEKPERKQFKLQFYKLLQCRAEAILKDGSHVIVLGDVNTSHQPIDHCDPSDIDDFGENPGRKWLNSFLHSGKQVEDRNNKDPDEELEATPPDPVHPGKFVDTFRYFHPTRTNAFTCWSTLTGARQTNYGTRIDYVFADCQLAKEYFVAADIMPEVEGSDHCPVWGQLSCPLLPS--------------------PKPPPLCTCYLPEFAGKQQKLSRFLVKVDQKSVQ---SEQREALPGSQEDGERRENLNPS--AAENVS-----SKKRVLISDSAVSKG---KKAKTLKASST-------PQGSLLSFFKPNLKHVVPSSEANARGETTSSENSQKASTTREKG-SSVTGRVPEDTEL---LLKGSSQVFPSNNVEEQIKTKHSTPQPNRGPSNAKKKESLVFWKSVLHGPPAAPSCKVHGEPCVLRTVKKEGPNMGKQFFVCARPQGH-ASNPEARCNFFAW 567
BLAST of mRNA_H-elongata_contig66748.14276.1 vs. uniprot
Match: A0A3B3BB14_ORYME (DNA-(apurinic or apyrimidinic site) endonuclease n=3 Tax=Oryzias TaxID=8089 RepID=A0A3B3BB14_ORYME) HSP 1 Score: 166 bits (421), Expect = 1.560e-40 Identity = 133/465 (28.60%), Postives = 198/465 (42.58%), Query Frame = 2
Query: 14 VDDKTEERREFKRDFLAMLEARIFEIQERGRGVLLVGDLNSCASQMDHGFAMTHAEFIDSNWSKWIRGILGLNSPDPP------------------RLIDCFRRLHPDRQNAFTCWNTVTGARENNYGTRIDYILAGATFAEEALEGCDIMPQFLGSDHCPVRAAFNISSTAGCRAERQSGVENSRVFHAEEWPEHPPECSCFYVELTTRQEKLAKYFVTGGSNSVAPAGMSTEGAVNGVAREAQDHERRSPSMGAREGIGGEYRGSQQMTLIGVAQGFEGIGRHEARRKRPVNVGRHEERLPNGREAQVRRNIGSNRARQSKLT--FACVSNRAISGDSAKPRTSPTGHVGEHQKCEDGLAQGVKGNTEGNRVADSINHKR---EPDSAEGGSNSRSKGVSAGVWNSIFGRNKNTPSCK-HGEPSIQRTVQKAGPNQHRRFYTCARSAGNWPIDRNARCNFFQW 1336
D + ER++FK F +L+ R + + G V+++GD+N+ Q+DH +F ++ KW+ L +SP+ P R +D FR HP R NAFTCW+T+TGAR+ NYGTRIDYI A AEE DIMP+ GSDHCPV + S A + P C+ + E +Q+KL+++ + S P S V +QD + R RE + G+ +++ + + + LP G++ + + S+ Q L F + TSP G + + N D+ K+ +P +A SK S+G W SI PSCK HGEP + RTV+K GPN ++F+ CAR G+ + ARCNFF+W
Sbjct: 146 ADPEKPERKQFKLQFYKLLQCRAEAVLKDGSHVIVLGDVNTSHRQIDHCDPCETNDFDENPGRKWLNDFLHNSSPEDPDXXXXXXLSELKNPTNPGRFVDTFRLFHPTRANAFTCWSTLTGARQTNYGTRIDYIFADCKLAEEQFVATDIMPEVEGSDHCPVWGKLSCSLLASSKP--------------------PLLCTRYLPEFVGKQQKLSRFLIKMDQKSSQPEQKS-------VLPASQDDDER------RENV--NPSGANKVSDKKRSLASDSV-------------------LPKGKKTKT---VNSSLKPQGNLLSFFKPKVTNVNHQEKETKLTSPQGDQKVETSRDSSSTAAAETEHASNASLDTDKRKKTACQPTAA------LSKVASSGFWKSILHGPPTAPSCKVHGEPCVLRTVKKEGPNMGKQFFVCARPQGH-ASNPEARCNFFEW 546
BLAST of mRNA_H-elongata_contig66748.14276.1 vs. uniprot
Match: UPI001445D066 (DNA-(apurinic or apyrimidinic site) lyase 2 n=1 Tax=Epinephelus lanceolatus TaxID=310571 RepID=UPI001445D066) HSP 1 Score: 166 bits (421), Expect = 2.240e-40 Identity = 141/474 (29.75%), Postives = 207/474 (43.67%), Query Frame = 2
Query: 14 VDDKTEERREFKRDFLAMLEARIFEIQERGRGVLLVGDLNSCASQMDHGFAMTHAEFIDSNWSKWIRGIL------------------GLNSPDPP---RLIDCFRRLHPDRQNAFTCWNTVTGARENNYGTRIDYILAGATFAEEALEGCDIMPQFLGSDHCPVRAAFNISSTAGCRAERQSGVENSRVFHAEEWPEHPPECSCFYVELTTRQEKLAKYFVTGGSNSVAPAGMSTEGAVNGVAREAQDHERRSPSMGAREGIGGEYRGSQQMTLIGVAQGFEGIGRHEARRK-----------RPVNVGRHEERLPNGREAQVRRNIGSNRARQSKLTFACVSNRAISGDSAKPRTSPTGHVGEHQKCEDGLAQGVKGNTEGNRVADSINHKREPDSAEGGSNSRSKGVSAGVWNSIFGRNKNTPSCK-HGEPSIQRTVQKAGPNQHRRFYTCARSAGNWPIDRNARCNFFQW 1336
D + ER+ FK F +L++R I + G V+++GD+N+ Q+DH + +F ++ KW+ G L + S DP + +D FR HP R +AFTCW+T+TGAR+ NYGTRIDYI A A+E DIMP+ GSDHCPV + S + PP C+ + E +Q+KL+++FV S A A+ G E + E +PS G G + +T V + + K +P NV + EA VR+ N K T + A S + P + Q C G Q E ++ ++ + +P G SN++ KG S+ W S+ PSCK HGEP + RTV+K GPN ++F+ CAR G+ + +ARCNFF W
Sbjct: 145 ADPEKPERKRFKLQFYKLLQSRAEAILKDGSHVIVLGDVNTSHRQIDHCDPSDNDDFDENPGRKWLNGFLYSGRQEEDENXXXXXXESEVTSTDPNHGGKFMDTFRYFHPTRTSAFTCWSTLTGARQTNYGTRIDYIFADCQLAKEQFVAADIMPEVEGSDHCPVWGELSCSLLPSSKP--------------------PPLCTRYLPEFAGKQQKLSRFFVKVDQKS---AQSEQSDALPGSQEEQERRENLNPS-----GAGNTSGKKRLLTSDSVVPKGKKTKTVKTSSKPQGSLLSFFKPKPTNV-------ISSTEASVRQ--CENTPSMDKDTSSQNPKEASSVTGSVPEDTDLVPDNSSQLCSSGNTQ------EKDKQIETKHLTSQP--TVGNSNTK-KGASSVFWKSVLHGPPPPPSCKVHGEPCVLRTVKKEGPNMGKQFFVCARPQGH-ASNPDARCNFFLW 571
BLAST of mRNA_H-elongata_contig66748.14276.1 vs. uniprot
Match: A0A6P7MXP0_BETSP (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Betta splendens TaxID=158456 RepID=A0A6P7MXP0_BETSP) HSP 1 Score: 166 bits (420), Expect = 2.430e-40 Identity = 136/475 (28.63%), Postives = 202/475 (42.53%), Query Frame = 2
Query: 14 VDDKTEERREFKRDFLAMLEARIFEIQERGRGVLLVGDLNSCASQMDHGFAMTHAEFIDSNWSKWIRGIL--GLNSPD-----------PP-------RLIDCFRRLHPDRQNAFTCWNTVTGARENNYGTRIDYILAGATFAEEALEGCDIMPQFLGSDHCPVRAAFNISSTAGCRAERQSGVENSRVFHAEEWPEHPPECSCFYVELTTRQEKLAKYFVTGGSNSVAPAGMSTEGAVNGVAREAQDHERRSPSMGAREGIGGEYRGSQQMTLIGVAQGFEGIGRHEARRKRPVNVGRHEERLPNGREAQVRRNIGSNRARQSKLTF------------ACVSNRAISGDSAKPRTSPTGHVGEHQKCEDGLAQGVKGNTEGN-RVADSINHKREPDSAEGGSNSRSKGVSAGVWNSIFGRNKNTPSCK-HGEPSIQRTVQKAGPNQHRRFYTCARSAGNWPIDRNARCNFFQW 1336
D + ER++FK F +L+ R + G V+++GD+N+ +DH + +F ++ KW+ G L G D PP R +D FR HP R NAFTCW+T+TGAR+ NYGTRIDYI A AEE DIMP+ GSDHCPV + + P C+ + E +Q+KL+++FV SV + + G + + E +P E ++ TLI + P G++ ++ ++ S++ + S L+F A V ++ S DS K T + E D + + E + +V + I K G KG S W S+F PSCK HGEP + RTV+K GPN ++F+ CAR G+ + ARCNFF+W
Sbjct: 145 ADPEKPERKQFKLQFYKLLQCRAEALLNAGSHVIVLGDVNTSHRPIDHCDSSEIDDFEENPGRKWLNGFLHSGKQEADGNQEEHDESGIPPADSVHAGRFVDTFRHFHPTRTNAFTCWSTLTGARQTNYGTRIDYIFADCQLAEEYFVAADIMPEVEGSDHCPVWGQLSCPLLPSSKP--------------------PSLCTRYLPEFAGKQQKLSRFFVKVDQRSVQ---SQQKEELPGSQDDGERRENLNPL---------ESENVKKRTLISESD------------------------APKGKKTKIVKS--SSKPQGSLLSFFKPKLTNVPPTEASVRSQMTSEDSPKAST-----IREKASVADRSPEDTEAVCESSSQVEEQIKSKHSDPQVNVGPTEARKGESLVFWKSVFRGPPPAPSCKVHGEPCVLRTVKKEGPNMGKQFFVCARPQGH-ASNPEARCNFFEW 555
BLAST of mRNA_H-elongata_contig66748.14276.1 vs. uniprot
Match: A0A0P7U526_SCLFO (DNA-(apurinic or apyrimidinic site) endonuclease n=2 Tax=Scleropages formosus TaxID=113540 RepID=A0A0P7U526_SCLFO) HSP 1 Score: 165 bits (418), Expect = 6.100e-40 Identity = 143/482 (29.67%), Postives = 202/482 (41.91%), Query Frame = 2
Query: 14 VDDKTEERREFKRDFLAMLEARIFEIQERGRGVLLVGDLNSCASQMDHGFAMTHAEFIDSNWSKWIRGIL---------------------GLNSPDPPRLIDCFRRLHPDRQNAFTCWNTVTGARENNYGTRIDYILAGATFAEEALEGCDIMPQFLGSDHCPVRAAFNISSTAGCRAERQSGVENSRVFHAEEWPEHPPECSCFYVELTTRQEKLAKYFVT-------GGSNSVAPAGMSTEGAVNGVAREAQDHERRSPSMGAREGI-----GGEYRGSQQMTLIGVAQGFEGIGRHEARRKRPVNVGRHEERLPNGREAQVRRNIGSNRARQSKLTFACVSNRAISGDSAKPRTSPT-----GHVGEHQKCEDGLAQGVKGNT--EGNRVADSINHKREPDSAEGGSNSRSKGVSAGVWNSIFGRNKNTPSCK-HGEPSIQRTVQKAGPNQHRRFYTCARSAGNWPIDRNARCNFFQW 1336
D + ER++FK F +L+AR I E G V+++GD+N+ +DH F D KW+ L R +D FR HP R NAFTCW+T+TGAR+ NYGTRIDYI A E DIMP+ GSDHCPV+ G + PP C+ + E +Q+KL+++ V G ++S+ + S E N E S S G R+G+ + + S+ G QG E + +P LP+ + R + S A L GD+ + P GH G ++ + G + ++G T E + S N K P +GG+ S + G S G W S+ P CK H EP + RTV+KAG N R+F+ CAR G+ + ARCNFF W
Sbjct: 145 ADPEKPERKQFKLHFYRLLQARAEAILESGSHVIVLGDINTSHKPIDHCDPADVENFQDHPGRKWLNSFLIGECKEESCSNVEEDEEAHQVSQTHGSGGRFVDTFRYFHPTRSNAFTCWSTLTGARQTNYGTRIDYIFADRVLVETRFLEADIMPEVEGSDHCPVQGHLRCIQVPGSKC--------------------PPLCTRYLPEFAGKQQKLSRFLVKVDQQASRGSTDSLPSSQESGETCENQNPVE-------SFSCGKRKGLMPEPSASKSKKSKTKRCTGKPQG----NLLEFFKPKPDRAA-----LPSLNDCG-RGSKSSGPAHPLSL-----------GDATLNKLDPAVGGGGGHNGANRMRDTGEEEPLRGGTALEEDGCGSSANRKALPLEEDGGAGSSAAGGSLGFWKSVLRGPPQPPLCKVHQEPCVLRTVKKAGANMGRQFFVCARPQGH-ASNPQARCNFFAW 577
BLAST of mRNA_H-elongata_contig66748.14276.1 vs. uniprot
Match: UPI0012EE3EE4 (DNA-(apurinic or apyrimidinic site) lyase 2 n=1 Tax=Anarrhichthys ocellatus TaxID=433405 RepID=UPI0012EE3EE4) HSP 1 Score: 165 bits (417), Expect = 8.400e-40 Identity = 131/476 (27.52%), Postives = 207/476 (43.49%), Query Frame = 2
Query: 14 VDDKTEERREFKRDFLAMLEARIFEIQERGRGVLLVGDLNSCASQMDHGFAMTHAEFIDSNWSKWIRGIL-------GLNSPDPP--------------RLIDCFRRLHPDRQNAFTCWNTVTGARENNYGTRIDYILAGATFAEEALEGCDIMPQFLGSDHCPVRAAFNISSTAGCRAERQSGVENSRVFHAEEWPEHPPECSCFYVELTTRQEKLAKYFVTGGSNSVAPAGMSTEGAVNGVAREAQDHERRSPSMGAREGIGGEYRGSQQMTLIGVAQGFEGIGRHEARRKRPVNVGRHEERLPNGREA------QVRRNIGSNR--ARQSKLTFACVSNRAISGDSAKPRTSPTGHVGEHQKCEDGLAQGVKGNTEGNRVADSINHKR---EPDSAE--GGSNSRSKGVSAGVWNSIFGRNKNTPSCK-HGEPSIQRTVQKAGPNQHRRFYTCARSAGNWPIDRNARCNFFQW 1336
D + ER++FK F +L++R I + G V+++GD+N+ Q+DH + +F ++ KW+ L G+ +P + +D FR HP R +AFTCW+T+TGAR+ NYGTRIDY+ A A+E DIMP+ GSDHCPV + S + PP C+ + E +Q+KL+++ V S A+ G E + E +PS + G+ R +++ + + + + ++ + +L N + Q + +G + + Q+ + S A S S+ P + + G Q C ++ NHKR +P + G KG S G W S+F PSCK HGEP + RTV+K GPN ++F+ CA G+ + ARCNFF W
Sbjct: 145 ADPEKPERKQFKLQFYKLLQSRAEAILKDGSHVIVLGDVNTSHRQIDHCDPSDNDDFGENPGRKWLNAFLHSGREEEGMKEQEPNEESKVTSSDATHSGKFVDTFRFFHPTRTSAFTCWSTLTGARQTNYGTRIDYVFADCVLAKEQFVAADIMPEVEGSDHCPVWGQLSCSLLPSSKP--------------------PPLCTRYLPEFAGKQQKLSRFLVKVDQRSTP---SEQRDALPGSQEEEERRENLNPSGAGN--VSGKKRSLTSDSVVPKGKKTKTVKTSSNPKGSLLSF--FKPKLTNAAPSTEAPVKQCEKTLGKDEVTSSQNSQKASSSSEDASSVTSSIPEATELVYDGSPQLCTSSTSE--------------ENHKRMTTKPSTLHPTAGPPDAKKGASLGFWKSVFHGPPPPPSCKIHGEPCVLRTVKKEGPNMGKQFFVCAHPQGH-ASNPEARCNFFAW 578 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig66748.14276.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig66748.14276.1 >prot_H-elongata_contig66748.14276.1 ID=prot_H-elongata_contig66748.14276.1|Name=mRNA_H-elongata_contig66748.14276.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=449bp MLEARIFEIQERGRGVLLVGDLNSCASQMDHGFAMTHAEFIDSNWSKWIRback to top mRNA from alignment at H-elongata_contig66748:295..3354+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig66748.14276.1 ID=mRNA_H-elongata_contig66748.14276.1|Name=mRNA_H-elongata_contig66748.14276.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3060bp|location=Sequence derived from alignment at H-elongata_contig66748:295..3354+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig66748:295..3354+ >mRNA_H-elongata_contig66748.14276.1 ID=mRNA_H-elongata_contig66748.14276.1|Name=mRNA_H-elongata_contig66748.14276.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2694bp|location=Sequence derived from alignment at H-elongata_contig66748:295..3354+ (Himanthalia elongata Himel1 dioecious)back to top |