mRNA_H-elongata_contig66528.14251.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig66528.14251.1
Unique NamemRNA_H-elongata_contig66528.14251.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig66528.14251.1 vs. uniprot
Match: A0A6H5L5H7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5H7_9PHAE)

HSP 1 Score: 268 bits (684), Expect = 1.790e-79
Identity = 139/227 (61.23%), Postives = 169/227 (74.45%), Query Frame = 1
Query:    4 VQHPDSKILLTEVTGIAEAWKIHYGRLAEDVTGNSKSPNKWRRWTPKSQRLRHITGLDLVFTWEEMVGALNRLKRHKFPGSDGIPADVYKLAIGDE--ISPMGKALLAVVNLMWVGQVIPDVWMESTVVSIPKKGNLTDMNDYRGISLMGTDLKVLMVLISLRLSAAMERERLFSPAQAGFRRQEECATQVACLLEITKHRKIRGKPSYLAFVDLKKAYDTVPHEAL 678
            VQHPDS+ LLT    I+ AW+ HY RLA DVTGNS+  +KW  W    QR RH+T LD     EEMV AL R+KRHK PG+DG+PAD  +LA G+E   SPMGK +L ++NL+W  +VIP    ESTVV IPKKG++TDMN++RGISLM T LKVL+++IS RL++A ER +LFS +QAGFR +EEC TQ ACLLEI + RK R K +YL FVDLKKAYDTVP EAL
Sbjct:  441 VQHPDSRALLTSANDISAAWRTHYQRLAADVTGNSRKSDKWNAWRAAPQR-RHMTELDGPILREEMVEALARIKRHKSPGNDGVPADFLELAGGEEGSQSPMGKTVLGMLNLIWKTRVIPTDRRESTVVPIPKKGDMTDMNNHRGISLMNTVLKVLVMIISTRLNSAFERHKLFSQSQAGFRTREECVTQAACLLEICQRRKFRRKSAYLMFVDLKKAYDTVPQEAL 666          
BLAST of mRNA_H-elongata_contig66528.14251.1 vs. uniprot
Match: A0A2R5FJC4_9STRA (LINE-1 retrotransposable element ORF2 protein (Fragment) n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5FJC4_9STRA)

HSP 1 Score: 166 bits (420), Expect = 4.160e-46
Identity = 85/194 (43.81%), Postives = 128/194 (65.98%), Query Frame = 1
Query:    1 SVQHPDSKILLTEVTGIAEAWKIHYGRLAEDVTGNSKSPNKWRRWTPKSQRLRHITGLDLVFTWEEMVGALNRLKRHKFPGSDGIPADVYKLAI-GDEIS--PMGKALLAVVNLMWVGQVIPDVWMESTVVSIPKKGNLTDMNDYRGISLMGTDLKVLMVLISLRLSAAMERERLFSPAQAGFRRQEECATQVA 573
            +++ PDS  LL E   IA AW  HYGRLA D TG+S+  + W +  P+++    I GL+   + EE+  A+  +K ++ PG DG+PA++++L + G E +  P  KA+  V+N ++    +P+ W  STVVSIPKKG+L DMN+YRGISLM T LK++M +++ R+  A E + +++  Q GFRR+EECA QVA
Sbjct:  189 ALRDPDSGELLLEAPEIAGAWATHYGRLAADATGHSRDDDHWAQLWPEAEEREEIEGLNDWISREEIASAILGMKNNRAPGDDGVPAELWRLLVRGAEATEAPAMKAIENVINALFFKAFVPECWCTSTVVSIPKKGDLEDMNNYRGISLMSTFLKIIMRVVARRIDRAFETQSMWAREQGGFRRREECAAQVA 382          
BLAST of mRNA_H-elongata_contig66528.14251.1 vs. uniprot
Match: A0A1R1YP44_9FUNG (LINE-1 retrotransposable element ORF2 protein (Fragment) n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1YP44_9FUNG)

HSP 1 Score: 171 bits (434), Expect = 2.050e-45
Identity = 91/211 (43.13%), Postives = 124/211 (58.77%), Query Frame = 1
Query:   52 AEAWKIHYGRLAEDVTGNSKSPNKWRRWTPKSQRLRHITGLDLVFTWEEMVGALNRLKRHKFPGSDGIPADVYKLAIGDE--ISPMGKALLAVVNLMWVGQVIPDVWMESTVVSIPKKGNLTDMNDYRGISLMGTDLKVLMVLISLRLSAAMERERLFSPAQAGFRRQEECATQVACLLEITKHRKIRGKPSYLAFVDLKKAYDTVPHEAL 678
            +EAW  H+  LA+D TGNS+S  KW      S+ +   T  D + TW E+  AL     +K PGSDGIP++V+KL   +E   SP  K    +VN +W  + IP     S +V IPKKG++ D N+YRGISL+ T  KVL  +I+ RLS    +  +    QAGFR +EEC  Q   L E+ + RKI G  +++ F+D  KAYD VPH+AL
Sbjct: 1037 SEAWAAHFEELAKDSTGNSRSAEKWSNMGLGSEAV--YTECDAILTWTEICAALKSTPNNKSPGSDGIPSEVWKLVQNEEEPTSPFAKLFSKLVNKIWEDEKIPQKLDPSVIVPIPKKGDMRDPNNYRGISLIPTLSKVLSKIIARRLSKIDNKHDILVKEQAGFRSREECVAQATALYEVVRRRKISGLSTWIGFIDFAKAYDRVPHQAL 1245          
BLAST of mRNA_H-elongata_contig66528.14251.1 vs. uniprot
Match: A0A498SLY1_ACAVI (Reverse transcriptase domain-containing protein n=1 Tax=Acanthocheilonema viteae TaxID=6277 RepID=A0A498SLY1_ACAVI)

HSP 1 Score: 168 bits (426), Expect = 6.160e-45
Identity = 89/216 (41.20%), Postives = 132/216 (61.11%), Query Frame = 1
Query:   49 IAEAWKIHYGRLAEDVTGNSKSPNKWRRWTPKSQRLRHITGLDLVFTWEEMVGALNRLKRHKFPGSDGIPADVYKLAIGD------EISPMGKALLAVVNLMWVGQVIPDVWMESTVVSIPKKGNLTDMNDYRGISLMGTDLKVLMVLISLRLSAAMERERLFSPAQAGFRRQEECATQVACLLEITKHRKIRGKPSYLAFVDLKKAYDTVPHEAL 678
            IAE W+ HY  L ED TG+SK+   W ++    +    ++  ++ F+W E+V A+  L  +K  G DGIPA+ +KL   D        + +GK L ++   +WV   IP+ W  + ++SIPKKG+LT  ++YRGISL+    K+L  ++S R+S  +E   +    QAGFR++EEC  QV  L+E  + RK +G+P+YLAF+D KKAYD V HEAL
Sbjct:  314 IAEVWREHYRNLFEDSTGHSKNKEYWSKFPIHIRSTVELS--NIPFSWSEIVLAVRSLSTNKAAGPDGIPAEFFKLINNDMDTGLAPCTKLGKFLFSIFEKVWVSGKIPNSWNLAKIISIPKKGDLTITDNYRGISLIPVISKILSKMLSSRISYHLESNGIICKEQAGFRKREECLGQVIALVEAIQRRKHKGEPTYLAFIDFKKAYDMVAHEAL 527          
BLAST of mRNA_H-elongata_contig66528.14251.1 vs. uniprot
Match: A0A1R1YAQ4_9FUNG (RNA-directed DNA polymerase from mobile element jockey (Fragment) n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1YAQ4_9FUNG)

HSP 1 Score: 168 bits (425), Expect = 3.060e-44
Identity = 92/222 (41.44%), Postives = 128/222 (57.66%), Query Frame = 1
Query:   19 SKILLTEVTGIAEAWKIHYGRLAEDVTGNSKSPNKWRRWTPKSQRLRHITGLDLVFTWEEMVGALNRLKRHKFPGSDGIPADVYKLAIGDE--ISPMGKALLAVVNLMWVGQVIPDVWMESTVVSIPKKGNLTDMNDYRGISLMGTDLKVLMVLISLRLSAAMERERLFSPAQAGFRRQEECATQVACLLEITKHRKIRGKPSYLAFVDLKKAYDTVPHEAL 678
            S+ L+T+    AE W  H+  LA D TGNS+S  KWR     S  +   T  D   +W E+  AL     +K PGSDGIP++ +KL   ++   SP  K LL ++N +W  + IP     S VV IPKKG++ + N+YRGISL+ T  KV+  +IS RL     +  + +  QAGFR +EEC  Q   L E+ + RKI G  +++ F+D  KAYD VPH+AL
Sbjct:  402 SRQLVTDSETKAEVWAAHFEELARDSTGNSRSAEKWRDIGSDSTEV--FTECDTPLSWTEIRAALKSTPNNKSPGSDGIPSEAWKLVQDEDEPTSPFAKLLLRLINGIWDAEKIPKQLDPSVVVPIPKKGDMRESNNYRGISLIPTLSKVVSKIISRRLCKIDNKYNILAKEQAGFRSREECVAQATTLYEVVRRRKISGLSTWIGFIDFAKAYDRVPHQAL 621          
BLAST of mRNA_H-elongata_contig66528.14251.1 vs. uniprot
Match: A0A3M2C3P5_9GAMM (Reverse transcriptase domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M2C3P5_9GAMM)

HSP 1 Score: 167 bits (424), Expect = 4.390e-44
Identity = 96/244 (39.34%), Postives = 137/244 (56.15%), Query Frame = 1
Query:    4 VQHPDSKILLTEVTGIAEAWKIHYGRLAEDVTGNSKSPNKWRRWTPKSQRLRHITGLDLVFTWEEMVGALNRLKRHKFPGSDGIPADVYKLAIGDEI---------------SPMGKALLAVVNLMWVGQVIPDVWMESTVVSIPK-KGNLTDMNDYRGISLMGTDLKVLMVLISLRLSAAMERE---RLFSPAQAGFRRQEECATQVACLLEITKHRKIRGKPSYLAFVDLKKAYDTVPHEAL 678
            ++HP SK +LT+   IA+AW +++G LAED TG+      W R       L  + GL+    W+E+  AL  +K  K PG DG+ AD  KL  G  +               +PM   L  ++  MW  + +P VW  + VV I K +G+  +M +YRGISL+   LK+L  +I+ RL++ ++ +   RL    QAGFR +EEC   +  L E+ + R+I   PSYLAF+DLKKAYDTVPH AL
Sbjct:  618 IKHPHSKEVLTDPLEIAQAWNLYFGELAEDRTGHQSDTAHWERVGSSIPSLPPLEGLNRPLQWKEVRAALLSMKNGKAPGCDGVSADFLKLCCGQSLEEEDDDGDDAETHPPNPMAAVLFKLLCAMWAQETVPSVWNMAEVVPIFKNRGDQLEMENYRGISLIPVVLKLLCTIITRRLASMIDDQINPRLHKE-QAGFRSREECLGHIVALYEVLRRRQIMQLPSYLAFIDLKKAYDTVPHGAL 860          
BLAST of mRNA_H-elongata_contig66528.14251.1 vs. uniprot
Match: A0A1R1X7T5_9FUNG (RNA-directed DNA polymerase from mobile element jockey n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1X7T5_9FUNG)

HSP 1 Score: 167 bits (423), Expect = 5.900e-44
Identity = 88/220 (40.00%), Postives = 131/220 (59.55%), Query Frame = 1
Query:   28 LLTEVTGIAEAWKIHYGRLAEDVTGNSKSPNKWRRWTPKSQRLRHITGLDLVFTWEEMVGALNRLKRHKFPGSDGIPADVYKLAIGDEI---SPMGKALLAVVNLMWVGQVIPDVWMESTVVSIPKKGNLTDMNDYRGISLMGTDLKVLMVLISLRLSAAMERERLFSPAQAGFRRQEECATQVACLLEITKHRKIRGKPSYLAFVDLKKAYDTVPHEAL 678
            L+T+    AE W  H+ +LA+D TGNS+S +KW+     +         D   +W E+  AL     +K PGSDGIP++V+KL + +EI   SP+ K +  ++N +W  + +P     S VV IPKKG++ D N+YRGISL+ T  KV+  +++ RL A   +  + +  QAGFR +EEC  Q   L E+ + RKI G  +++ F+D  KAYD VPH+AL
Sbjct:  582 LITDTDAKAEVWATHFEKLAKDSTGNSRSADKWKNMGTIAAVFPEC---DAPLSWAEICDALKTTPNNKSPGSDGIPSEVWKL-VQNEIEPTSPLAKVISKIINRIWDSENMPKQMDPSVVVPIPKKGDMRDPNNYRGISLIPTLAKVISKIVARRLCAIDNKYEILAKEQAGFRSREECVAQATTLYEVVRRRKISGLSTWIGFIDFAKAYDRVPHQAL 797          
BLAST of mRNA_H-elongata_contig66528.14251.1 vs. uniprot
Match: A0A1R1Y7R2_9FUNG (Putative RNA-directed DNA polymerase from transposon BS n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1Y7R2_9FUNG)

HSP 1 Score: 166 bits (420), Expect = 1.430e-43
Identity = 89/219 (40.64%), Postives = 126/219 (57.53%), Query Frame = 1
Query:   28 LLTEVTGIAEAWKIHYGRLAEDVTGNSKSPNKWRRWTPKSQRLRHITGLDLVFTWEEMVGALNRLKRHKFPGSDGIPADVYKLAIGDE--ISPMGKALLAVVNLMWVGQVIPDVWMESTVVSIPKKGNLTDMNDYRGISLMGTDLKVLMVLISLRLSAAMERERLFSPAQAGFRRQEECATQVACLLEITKHRKIRGKPSYLAFVDLKKAYDTVPHEAL 678
            L+T+    AE W  H+  LA+D TGNS+S  KWR            T  D   +W E+  AL     +K PGSDGIP++V+K+   ++   SP+ K +L ++  +W  + IP     S V+ IPKKG++ D N+YRGISL+ T  KVL  +I+ RL     +  + +  QAGFR +EEC  Q   L E+ + RKI G  +++ F+D  KAYD VPHEAL
Sbjct:  343 LITDSEAKAEVWASHFEELAKDSTGNSRSAKKWR--DIGKNYTAEFTECDTPLSWAEICAALKSTPNNKSPGSDGIPSEVWKMVQYEDEPTSPLAKLILRLITGIWDAEKIPKQLDPSVVIPIPKKGDIRDPNNYRGISLIPTLSKVLSKIIARRLCKIDNKYSILAKEQAGFRTREECVAQATTLYEVVRRRKISGLSTWIGFIDFAKAYDRVPHEAL 559          
BLAST of mRNA_H-elongata_contig66528.14251.1 vs. uniprot
Match: A0A1R0GS88_9FUNG (LINE-1 reverse transcriptase-like protein n=1 Tax=Smittium mucronatum TaxID=133383 RepID=A0A1R0GS88_9FUNG)

HSP 1 Score: 162 bits (411), Expect = 1.820e-43
Identity = 87/222 (39.19%), Postives = 129/222 (58.11%), Query Frame = 1
Query:   22 KILLTEVTGIAEAWKIHYGRLAEDVTGNSKSPNKWRRWTPKSQRLRHITGLDLVFTWEEMVGALNRLKRHKFPGSDGIPADVYKLAIGDEISP---MGKALLAVVNLMWVGQVIPDVWMESTVVSIPKKGNLTDMNDYRGISLMGTDLKVLMVLISLRLSAAMERERLFSPAQAGFRRQEECATQVACLLEITKHRKIRGKPSYLAFVDLKKAYDTVPHEAL 678
            K L+ +     + W+ H+  LA D TGNS++ +KW         +      D    W E+  AL  +  +K  G+DGIP +V+KL I  EISP   M K +  ++  +W    IP++   S VV +PKKGNL+D N+YRGISL+ T +K+L  +++ +LSA  E+ ++ +  Q GFR +EEC +Q   L EI K RK+ G  +++ F+D  KAYD VPH AL
Sbjct:  265 KNLIVDSESRLKVWENHFKNLATDTTGNSRTADKWEPMLDYD--IESFPECDEPIKWSEITTALKEIPNNKASGTDGIPNEVWKL-IKSEISPTSKMAKIVFKILKSIWDTGNIPEIMSTSIVVPVPKKGNLSDPNNYRGISLIPTFIKILAKVLANKLSAISEKYKIIAKEQGGFRTREECVSQATILYEIVKRRKLMGLETWIGFIDFSKAYDLVPHMAL 483          
BLAST of mRNA_H-elongata_contig66528.14251.1 vs. uniprot
Match: A0A1R1XRD3_9FUNG (Transposon TX1 uncharacterized (Fragment) n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1XRD3_9FUNG)

HSP 1 Score: 160 bits (404), Expect = 5.540e-43
Identity = 87/212 (41.04%), Postives = 122/212 (57.55%), Query Frame = 1
Query:   28 LLTEVTGIAEAWKIHYGRLAEDVTGNSKSPNKWRRWTPKSQRLRHITGLDLVFTWEEMVGALNRLKRHKFPGSDGIPADVYKLAIGDE--ISPMGKALLAVVNLMWVGQVIPDVWMESTVVSIPKKGNLTDMNDYRGISLMGTDLKVLMVLISLRLSAAMERERLFSPAQAGFRRQEECATQVACLLEITKHRKIRGKPSYLAFVDLKKAYD 657
            L+T+    +EAW  H+  LA+D TGNS+S  KW +   KS  +      D   TW+E+ GAL     +K PG DGIP++++KL   +E   SP  K L  +V  MW  + +P     S VV IPKKG++ D N+YRGISL+ T  KV+  +I+ RL     +  + +  QAGFR +EEC  Q   L EI + RKI G  +++ F+D  KAYD
Sbjct:  262 LITDAEAKSEAWAAHFEELAKDNTGNSRSKEKWSKIVNKSVGV--FPDCDAPLTWKEICGALKATPNNKSPGCDGIPSEIWKLVQHEEEPTSPFAKLLSRLVKGMWQAERMPKQMDPSVVVPIPKKGDMRDPNNYRGISLIQTLAKVVSKIIARRLCIIDRKHDILAKEQAGFRSREECVAQATTLYEIVRRRKISGLSTWIGFIDFAKAYD 471          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig66528.14251.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L5H7_9PHAE1.790e-7961.23Reverse transcriptase domain-containing protein n=... [more]
A0A2R5FJC4_9STRA4.160e-4643.81LINE-1 retrotransposable element ORF2 protein (Fra... [more]
A0A1R1YP44_9FUNG2.050e-4543.13LINE-1 retrotransposable element ORF2 protein (Fra... [more]
A0A498SLY1_ACAVI6.160e-4541.20Reverse transcriptase domain-containing protein n=... [more]
A0A1R1YAQ4_9FUNG3.060e-4441.44RNA-directed DNA polymerase from mobile element jo... [more]
A0A3M2C3P5_9GAMM4.390e-4439.34Reverse transcriptase domain-containing protein n=... [more]
A0A1R1X7T5_9FUNG5.900e-4440.00RNA-directed DNA polymerase from mobile element jo... [more]
A0A1R1Y7R2_9FUNG1.430e-4340.64Putative RNA-directed DNA polymerase from transpos... [more]
A0A1R0GS88_9FUNG1.820e-4339.19LINE-1 reverse transcriptase-like protein n=1 Tax=... [more]
A0A1R1XRD3_9FUNG5.540e-4341.04Transposon TX1 uncharacterized (Fragment) n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig66528contigH-elongata_contig66528:2579..3256 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score148.7
Seed ortholog evalue3.3e-33
Seed eggNOG ortholog45157.CMJ308CT
EggNOG free text desc.Ribonuclease H protein
EggNOG OGsKOG1075@1,KOG1075@2759
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons1
Model size678
Cds size678
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931054.5233593-CDS-H-elongata_contig66528:2578..32561622931054.5233593-CDS-H-elongata_contig66528:2578..3256Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig66528 2579..3256 +
1691679679.322255-CDS-H-elongata_contig66528:2578..32561691679679.322255-CDS-H-elongata_contig66528:2578..3256Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig66528 2579..3256 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig66528.14251.1prot_H-elongata_contig66528.14251.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig66528 2579..3256 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig66528.14251.1

>prot_H-elongata_contig66528.14251.1 ID=prot_H-elongata_contig66528.14251.1|Name=mRNA_H-elongata_contig66528.14251.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=226bp
SVQHPDSKILLTEVTGIAEAWKIHYGRLAEDVTGNSKSPNKWRRWTPKSQ
RLRHITGLDLVFTWEEMVGALNRLKRHKFPGSDGIPADVYKLAIGDEISP
MGKALLAVVNLMWVGQVIPDVWMESTVVSIPKKGNLTDMNDYRGISLMGT
DLKVLMVLISLRLSAAMERERLFSPAQAGFRRQEECATQVACLLEITKHR
KIRGKPSYLAFVDLKKAYDTVPHEAL
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mRNA from alignment at H-elongata_contig66528:2579..3256+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig66528.14251.1 ID=mRNA_H-elongata_contig66528.14251.1|Name=mRNA_H-elongata_contig66528.14251.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=678bp|location=Sequence derived from alignment at H-elongata_contig66528:2579..3256+ (Himanthalia elongata Himel1 dioecious)
TCGGTACAACATCCAGACTCGAAGATACTCCTAACGGAGGTGACGGGTAT TGCCGAAGCATGGAAAATCCACTACGGCAGATTGGCCGAGGACGTGACTG GAAATAGTAAATCCCCGAACAAGTGGAGGCGCTGGACGCCCAAATCTCAA CGGTTGAGACATATCACAGGTCTAGATTTGGTGTTTACGTGGGAAGAGAT GGTAGGTGCACTCAACCGACTAAAGCGGCATAAATTCCCCGGTAGTGATG GAATCCCAGCTGATGTATATAAACTGGCAATTGGAGACGAGATTTCGCCC ATGGGGAAAGCACTACTGGCAGTAGTCAACCTCATGTGGGTGGGACAGGT GATACCCGATGTATGGATGGAATCGACTGTAGTATCAATCCCCAAGAAAG GGAATCTCACGGATATGAATGATTACCGTGGCATCTCCCTAATGGGAACG GATTTGAAGGTCCTAATGGTCCTAATAAGCTTACGATTGAGTGCTGCCAT GGAAAGAGAACGGCTCTTTAGCCCCGCACAAGCGGGGTTTCGACGACAGG AGGAGTGCGCGACACAAGTGGCATGCCTATTGGAGATAACAAAGCACAGG AAGATCAGGGGGAAGCCCTCCTATCTAGCGTTCGTTGACCTTAAGAAAGC ATACGATACGGTGCCGCATGAGGCACTT
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Coding sequence (CDS) from alignment at H-elongata_contig66528:2579..3256+

>mRNA_H-elongata_contig66528.14251.1 ID=mRNA_H-elongata_contig66528.14251.1|Name=mRNA_H-elongata_contig66528.14251.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1356bp|location=Sequence derived from alignment at H-elongata_contig66528:2579..3256+ (Himanthalia elongata Himel1 dioecious)
TCGGTACAACATCCAGACTCGAAGATACTCCTAACGGAGGTGACGGGTAT
TGCCGAAGCATGGAAAATCCACTACGGCAGATTGGCCGAGGACGTGACTG
GAAATAGTAAATCCCCGAACAAGTGGAGGCGCTGGACGCCCAAATCTCAA
CGGTTGAGACATATCACAGGTCTAGATTTGGTGTTTACGTGGGAAGAGAT
GGTAGGTGCACTCAACCGACTAAAGCGGCATAAATTCCCCGGTAGTGATG
GAATCCCAGCTGATGTATATAAACTGGCAATTGGAGACGAGATTTCGCCC
ATGGGGAAAGCACTACTGGCAGTAGTCAACCTCATGTGGGTGGGACAGGT
GATACCCGATGTATGGATGGAATCGACTGTAGTATCAATCCCCAAGAAAG
GGAATCTCACGGATATGAATGATTACCGTGGCATCTCCCTAATGGGAACG
GATTTGAAGGTCCTAATGGTCCTAATAAGCTTACGATTGAGTGCTGCCAT
GGAAAGAGAACGGCTCTTTAGCCCCGCACAAGCGGGGTTTCGACGACAGG
AGGAGTGCGCGACACAAGTGGCATGCCTATTGGAGATAACAAAGCACAGG
AAGATCAGGGGGAAGCCCTCCTATCTAGCGTTCGTTGACCTTAAGAAAGC
ATACGATACGGTGCCGCATGAGGCACTTTCGGTACAACATCCAGACTCGA
AGATACTCCTAACGGAGGTGACGGGTATTGCCGAAGCATGGAAAATCCAC
TACGGCAGATTGGCCGAGGACGTGACTGGAAATAGTAAATCCCCGAACAA
GTGGAGGCGCTGGACGCCCAAATCTCAACGGTTGAGACATATCACAGGTC
TAGATTTGGTGTTTACGTGGGAAGAGATGGTAGGTGCACTCAACCGACTA
AAGCGGCATAAATTCCCCGGTAGTGATGGAATCCCAGCTGATGTATATAA
ACTGGCAATTGGAGACGAGATTTCGCCCATGGGGAAAGCACTACTGGCAG
TAGTCAACCTCATGTGGGTGGGACAGGTGATACCCGATGTATGGATGGAA
TCGACTGTAGTATCAATCCCCAAGAAAGGGAATCTCACGGATATGAATGA
TTACCGTGGCATCTCCCTAATGGGAACGGATTTGAAGGTCCTAATGGTCC
TAATAAGCTTACGATTGAGTGCTGCCATGGAAAGAGAACGGCTCTTTAGC
CCCGCACAAGCGGGGTTTCGACGACAGGAGGAGTGCGCGACACAAGTGGC
ATGCCTATTGGAGATAACAAAGCACAGGAAGATCAGGGGGAAGCCCTCCT
ATCTAGCGTTCGTTGACCTTAAGAAAGCATACGATACGGTGCCGCATGAG
GCACTT
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