mRNA_H-elongata_contig66416.14238.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig66416.14238.1
Unique NamemRNA_H-elongata_contig66416.14238.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig66416.14238.1 vs. uniprot
Match: A0A6H5KBW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBW5_9PHAE)

HSP 1 Score: 272 bits (696), Expect = 7.710e-79
Identity = 189/512 (36.91%), Postives = 237/512 (46.29%), Query Frame = 1
Query:    4 VQTLRYSPQTNFAGQVTLSVRVTDETGLKAENDVYLYVKEINDPPEIYLP-GDDGSPSI-QTNAGDSGDILVGIVITDVDVGDR------------RNALSLKFSPVSGTVSVSAERAIGVWIVDEATAGPQETLILRGSLESLQTALDGGSISYSTPASFSGRDTVTIEADDGGNCGGGGAGTKS-----------------------------------------------------------------------------------------------------------------------------------------------------------------------SWSISSLRISVGWLNDPPTVDAPRSI--VAARGTLE-SLVSGIRITDPDVADAPEGRGRLDVSLSTSMGGRLALDEMVALRNGLRNDGVDGHQVHLLGRPEYINNVLETLVFSCVNMTNDAKYADGAFIDELFLRVSDLGFSGSGGEQLATTSIVVKVG 987
            VQ L Y+P  +FAGQV +S+R TDETGL  E + YLYV+ INDPP I LP G+DG   + +  AG +GD ++GI ITDVD  DR            RNALSL+     G VS+ A+ AIGV +VD  TAGP  TL L+GS +SLQ ALDG  + YST A FSG D +T++ DDGGNCG GG  + +                                                                                                                                                                       S SI+ L++SVGW+NDPPTV+AP ++  VA++  +E SLV GIR+ D DV DAPEG GRLDV++STS+G  LA+D  +AL+NGLRN G     + LLGRPEY+NNVL TL  S         +A G  I+E+F+ VSDLGFSGSGGEQ AT SIVV+ G
Sbjct: 1528 VQMLEYTPPKDFAGQVVVSLRATDETGLSTEAETYLYVRPINDPPVIELPTGEDGETRVLEMTAGGAGDAVMGITITDVDAADRSDLCAYFEGVEARNALSLRLKSNFGNVSIVADSAIGVRVVDGPTAGPGATLFLQGSAKSLQAALDGRLVLYSTAADFSGYDVITVDVDDGGNCGAGGTHSTTGVLEIDVAPYDPPLLVAFNTSAMSEDSTIFTPEGAPLALPDLAVTGGSVGELSAVEVVLLAKSGNVSIKQPDLDSVQVLDSGELTGERLRIRGSPKALTTALAGLQFEPRPYFFGCWDRNMPFADDTPVRSPRRQGVLALARIYAIATPDGTGGDVGWDGLSVKPHPSMSIAHLKVSVGWVNDPPTVEAPDTVIVVASKAVVEPSLVPGIRVEDADVEDAPEGIGRLDVNVSTSIGSALAVDNTIALKNGLRNIGSSEQHIRLLGRPEYVNNVLATLTISPNTTDGTTSFAPGDRIEEIFVVVSDLGFSGSGGEQRATASIVVEAG 2039          
BLAST of mRNA_H-elongata_contig66416.14238.1 vs. uniprot
Match: D7G6U7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6U7_ECTSI)

HSP 1 Score: 246 bits (628), Expect = 9.690e-70
Identity = 178/500 (35.60%), Postives = 221/500 (44.20%), Query Frame = 1
Query:    4 VQTLRYSPQTNFAGQVTLSVRVTDETGLKAENDVYLYVKEINDPPEIYLP-GDDGSPSI-QTNAGDSGDILVGIVITDVDVGDRRNALSLKFSPVSGTVSVSAERAIGVWIVDEATAGPQETLILRGSLESLQTALDGGSISYSTPASFSGRDTVTIEADDGGNCGGGGAGTKS-----------------------------------------------------------------------------------------------------------------------------------------------------------------------SWSISSLRISVGWLNDPPTVDAPRSI--VAARGTLE-SLVSGIRITDPDVADAPEGRGRLDVSLSTSMGGRLALDEMVALRNGLRNDGVDGHQVHLLGRPEYINNVLETLVFSCVNMTNDAKYADGAFIDELFLRVSDLGFSGSGGEQLATTSIVVKVG 987
            VQ L Y+P  +FAGQV LS+R TDETGL  E + YLYV+ INDPP I LP G+DG   + +  AG +GD ++GI ITDVD  D                      AIGV +VD  TAGP ETL L+GS +SLQ ALD   + YS  A FSG D +T++ DDGGNCG GG  + +                                                                                                                                                                       S SI+ L++SVGW+NDPPTV+AP ++  VA++  +E SLV GIR+ D DV DAPEG GRLDV++STSMG  LA+D  +AL+NGLRN G     V LLG+PEY+NNVL TL  S         +A G  I+E+ + VSDLGFSGSGGEQ AT SIVV+ G
Sbjct: 1504 VQMLEYTPPKDFAGQVVLSLRATDETGLSTEAETYLYVRPINDPPVIELPTGEDGERWVLEMTAGGAGDAVMGITITDVDAADS---------------------AIGVRVVDGPTAGPGETLFLQGSAKSLQAALDRRVVLYSAAADFSGHDVITVDVDDGGNCGAGGTHSTTGVLEIDVAPYDPPLLVAFDTSVVSENSAIFTPEGAPLALPDLAVTGGSVGELSAVEVVILAKSGNVSIQQPGLDSIQVLDSGELTGDRLRVRGSPKALTTALAGLQFEPRPYFFGCWDRNMSFADDTPVRSSRRQGVLALARIYAIATPDGTGGDVGWDGLSVKPHPSMSIAQLKVSVGWVNDPPTVEAPDTVIVVASKAVIEPSLVPGIRVEDADVEDAPEGLGRLDVNVSTSMGSALAVDTTIALKNGLRNMGPSEQHVRLLGQPEYVNNVLATLTISPNTTDGTTSFAPGDRIEEISVVVSDLGFSGSGGEQSATASIVVEAG 1982          
BLAST of mRNA_H-elongata_contig66416.14238.1 vs. uniprot
Match: A0A7Y1BL46_9PSED (DUF4347 domain-containing protein n=1 Tax=Pseudomonas sp. WS 5011 TaxID=2717477 RepID=A0A7Y1BL46_9PSED)

HSP 1 Score: 100 bits (248), Expect = 2.000e-19
Identity = 103/340 (30.29%), Postives = 152/340 (44.71%), Query Frame = 1
Query:    1 VVQTLRYSPQTNFAGQVTLSVRVTDETGLKAENDVYLYVKEINDPPEIYLPGDDGSPSIQTNAGDSGDILVGIVITDVDVGDRRNALSLKFSPVSGTVSV-----SAERAIGVWIVDEATAGPQETLILRGSLESLQTALDGGSISYSTPASFSGRDTVTIEADDGGNCGGGGAGTKSSWSISSLRISVGWLNDPP--TVDAPRSIVAARGTLESLVSGIRITDPDVADAPEGRGRLDVSLSTSMGGRLALDEMVALRNGLRNDGVDGHQVHLLGRPEYINNVLETLVFSCVNMTNDAKYADGAFIDELFLRVSDLGFSGSGGEQLATTSIVVKVGPLTP 999
            V +T   +P    AG +++ V   D  G    +   + V  +ND P I  P     PSI     + GD L GI  +DVD G          SPV+ T+SV     SA  A GV +      G    + L GS+  + T +    + ++T +S +   T+TIE +DGGN G GGA T S+    +L + V  +ND P  ++ A +S+      + S  +G +I+   + D   G   ++V+LS +  G L L     L +    DG     +   G    IN  L TL +S  +  N A          L +  SDLG SGSGG Q  T ++ + V  L P
Sbjct:  860 VTRTFSGTPSNADAGTLSIEVTANDGNGGSVSDTFDMVVSAVNDAPVITAP-----PSIAIFEDEPGD-LSGISFSDVDAGT---------SPVTVTLSVPSGSLSATSAAGVTV-----GGTSSAMTLTGSISDINTFISAAGVVFTTASSVTSDVTLTIEINDGGNSGSGGALTDST----TLTLDVTAVNDAPVNSIPAAQSVDQDASLVFSNGNGNQIS---IGDVDAGANSVEVTLSVT-NGVLTLAGTAGL-SFTTGDGTADSSLVFSGSITDINAALATLTYSPTSGYNGAAV--------LSITTSDLGSSGSGGTQTDTDNVNITVNSLNP 1162          
BLAST of mRNA_H-elongata_contig66416.14238.1 vs. uniprot
Match: A0A550ECV9_PSEME (DUF4347 domain-containing protein n=1 Tax=Pseudomonas mendocina TaxID=300 RepID=A0A550ECV9_PSEME)

HSP 1 Score: 99.4 bits (246), Expect = 3.660e-19
Identity = 103/340 (30.29%), Postives = 152/340 (44.71%), Query Frame = 1
Query:    1 VVQTLRYSPQTNFAGQVTLSVRVTDETGLKAENDVYLYVKEINDPPEIYLPGDDGSPSIQTNAGDSGDILVGIVITDVDVGDRRNALSLKFSPVSGTVSV-----SAERAIGVWIVDEATAGPQETLILRGSLESLQTALDGGSISYSTPASFSGRDTVTIEADDGGNCGGGGAGTKSSWSISSLRISVGWLNDPP--TVDAPRSIVAARGTLESLVSGIRITDPDVADAPEGRGRLDVSLSTSMGGRLALDEMVALRNGLRNDGVDGHQVHLLGRPEYINNVLETLVFSCVNMTNDAKYADGAFIDELFLRVSDLGFSGSGGEQLATTSIVVKVGPLTP 999
            V +T   +P    AG +++ V   D  G    +   + V  +ND P I  P     PSI     + GD L GI  +DVD G          SPV+ T+SV     SA  A GV +      G    + L GS+  + T +    + ++T +S +   T+TIE +DGGN G GGA T S+    +L + V  +ND P  ++ A +S+      + S  +G +I+   + D   G   ++V+LS +  G L L     L +    DG     +   G    IN  L TL +S  +  N A          L +  SDLG SGSGG Q  T ++ + V  L P
Sbjct:  838 VTRTFSGTPGNADAGTLSIEVTANDGNGGNVSDTFDIVVSAVNDAPVITAP-----PSIAIFEDEPGD-LSGISFSDVDAGT---------SPVTVTLSVPSGSLSATSAAGVTV-----GGTSSAMTLTGSISDINTFISAAGVVFTTASSVTSDVTLTIEINDGGNSGSGGALTDST----TLTLDVTAVNDAPVNSIPAAQSVDQDASLVFSNGNGNQIS---IGDVDAGANSVEVTLSVT-NGVLTLAGTAGL-SFTTGDGTADSSLVFSGSITDINAALATLTYSPTSGYNGAAV--------LSITTSDLGSSGSGGTQTDTDNVNITVNSLNP 1140          
BLAST of mRNA_H-elongata_contig66416.14238.1 vs. uniprot
Match: A0A3M2H483_9PSED (DUF4347 domain-containing protein n=2 Tax=Pseudomonas sp. AOB-7 TaxID=2482750 RepID=A0A3M2H483_9PSED)

HSP 1 Score: 92.8 bits (229), Expect = 6.120e-17
Identity = 100/346 (28.90%), Postives = 147/346 (42.49%), Query Frame = 1
Query:    1 VVQTLRYSPQTNFAGQVTLSVRVTDETGLKAENDVYLYVKEINDPPEIYLPGDDGSPSIQTNAGDSGDILVGIVITDVDVGDRRNALSLKFSPVSGTVSV-----SAERAIGVWIVDEATAGPQETLILRGSLESLQTALDGGSISYSTPASFSGRDTVTIEADDGGNCGGGGAGTKSSWSISSLRISVGWLNDPPT--------VDAPRSIVAARGTLESLVSGIRITDPDVADAPEGRGRLDVSLSTSMGGRLALDEMVALRNGLRNDGVDGHQVHLLGRPEYINNVLETLVFSCVNMTNDAKYADGAFIDELFLRVSDLGFSGSGGEQLATTSIVVKVGPLTP 999
            + +T   +P    AG +++ V  +D  G    +   + V  +ND P +  P      SI  +  D    L GI  +DVD G          SPV+ T+SV     SA  A GV +      G    + L GS+  + T +    + ++T ++ +   T+TIE DDGGN G GGA T S+    ++ + V  +ND P         VD   S+V + G   +L+S        + D   G   ++V+LS S  G L L     L      DG     +   G    INN L  L FS     N A          L +   D G+SGSGG Q  + ++V+ V  L P
Sbjct:  816 LTRTFSGTPGNADAGTLSIEVIASDGNGGSVSDTFDIVVSAVNDAPTVTAPA-----SIIVSE-DMPTALTGISFSDVDAGT---------SPVTVTLSVPSGSLSATSAAGVTV-----GGTSSAMTLTGSISDINTFISAAGVVFTTASNATSDVTLTIEIDDGGNTGSGGAQTDST----TVTLDVSAVNDAPVNSLPGAQNVDQDASLVFSSGN-GNLIS--------IGDVDAGSNTVEVTLSAS-NGLLTLSGTTGL-TFTTGDGTADASMTFSGSISDINNALNGLTFSPTAGYNGAA--------SLQITTDDQGWSGSGGAQSDSDTLVITVNSLNP 1118          
BLAST of mRNA_H-elongata_contig66416.14238.1 vs. uniprot
Match: A0A1L7G6Q2_9PSED (Uncharacterized protein n=2 Tax=Pseudomonas alcaliphila TaxID=101564 RepID=A0A1L7G6Q2_9PSED)

HSP 1 Score: 89.7 bits (221), Expect = 6.430e-16
Identity = 96/336 (28.57%), Postives = 150/336 (44.64%), Query Frame = 1
Query:   19 YSPQTNFAGQVTLSVRVTD-----ETGLKAEND-VYLYVKEINDPPEIYLPGDDGSPSIQTNAGDSGDILVGIVITDVDVGDRRNALSLKFSPVSGTVSVSAERAIGVWIVDEATAG-PQETLILRGSLESLQTALDGGSISYSTPASFSGRDTVTIEADDGGNCGGGGAGTKSSWSISSLRISVGWLNDPPTVDAP--RSIVAARGTLESLVSGIRITDPDVADAPEGRGRLDVSLSTSMGGRLALDEMVALRNGLRNDGVDGHQVHLLGRPEYINNVLETLVFSCVNMTNDAKYADGAFIDELFLRVSDLGFSGSGGEQLATTSIVVKVGPLTP 999
            ++   N    VTL+  + D       G + +++ V L V  +ND P I  PG     SI     D    L GI  +DVD G          SPV+ T+SV A   +G       T G    ++ L GSL  +   +  G + ++T ++ +   T+TIE DDGGN G GGA T S+    ++ + V  +ND P    P  +++      + +  +G  I+   ++D   G   ++V+LS +  G L+L ++  L      DG     +   G    INN L  LVF+     N A          + +  +D G+SGSGG Q  T ++ + V  L P
Sbjct:  909 FTTAANATADVTLTASIDDGGNSGSGGAQQDSETVTLQVTAVNDAPSITAPG-----SIAITE-DVATALSGISFSDVDAGT---------SPVTVTLSV-ASGGLGATSASGVTVGGTASSMTLTGSLSDINAFIALGGVVFTTASNATSDVTLTIEIDDGGNTGSGGAQTDST----TVTLDVSAVNDAPVNSLPSAQNVDQDANLVFNSGNGNLIS---ISDVDAGSNMVEVTLSAT-NGLLSLSDITGLSFST-GDGTGDASMTFSGSISDINNALNGLVFTPTGGYNGAA--------SIQISTNDQGWSGSGGAQTDTDTVSITVNSLNP 1211          
BLAST of mRNA_H-elongata_contig66416.14238.1 vs. uniprot
Match: A0A1G9PPS7_9PSED (DUF4347 domain-containing protein (Fragment) n=3 Tax=Pseudomonas indica TaxID=137658 RepID=A0A1G9PPS7_9PSED)

HSP 1 Score: 87.8 bits (216), Expect = 2.650e-15
Identity = 102/336 (30.36%), Postives = 150/336 (44.64%), Query Frame = 1
Query:   13 LRYSPQTNFAGQVTLSVRVTD--ETGLK-AEND---VYLYVKEINDPPEIYLPGDDGSPSIQTNAGDSGDILVGIVITDVDVGDRRNALSLKFSPVSGTVSVSAERAIGVWIVDEATAGPQETLILRG-SLESLQTALDGGSISYSTPASFSGRDTVTIEADDGGNCGGGGAGTKSSWSISSLRISVGWLNDPPTVDAPRSIVAARGTLESLVSGIRITDPDVADAPEGRGRLDVSLSTSMGGRLALDEMVALRNGLRNDGVDGHQVHLLGRPEYINNVLETLVFSCVNMTNDAKYADGAFIDELFLRVSDLGFSGSGGEQLATTSIVVKVGPLTP 999
            L ++   N    VTL+V + D   TG   A+ D   V L V  +ND P I  P      SI  N  D    L GI ++DVD G          SPV+ T+SV +    GV I + + AG   +L L G +L  L T L GG I++ T A+ +G   +TI+ +D GN G GGA T ++    ++ + V  +ND P    P +    +  +    SG       ++D   G G + V+L T+  G ++L     L +    DG     +   G    IN  L  + FS     N            L +  +DLG SGSGG Q+ + ++ + V  L P
Sbjct:  972 LTFTTAANATSNVTLTVGINDGGNTGSGGAQTDSRTVTLQVAAVNDAPVINAPA-----SINVNE-DVATALTGISVSDVDAGS---------SPVTATLSVGS----GVLIFNGSEAG--SSLALVGVTLSELNTFLSGGLIAFRTDANATGNVVLTIQVNDLGNTGSGGAKTDTA----TVTLVVTAVNDAPVNSLPPAQSVDQDDVLIFSSG-NGNPISISDVDAGSGNVRVTL-TATNGLISLGGTAGL-SFTTGDGTSDATMTFEGTLADINAALNGMTFSPTGGYNGPA--------SLQIVTNDLGLSGSGGNQIDSDTLAITVNTLNP 1271          
BLAST of mRNA_H-elongata_contig66416.14238.1 vs. uniprot
Match: A0A4U0P6G8_9SPHI (T9SS type B sorting domain-containing protein n=1 Tax=Sphingobacterium olei TaxID=2571155 RepID=A0A4U0P6G8_9SPHI)

HSP 1 Score: 87.4 bits (215), Expect = 3.840e-15
Identity = 87/335 (25.97%), Postives = 151/335 (45.07%), Query Frame = 1
Query:    1 VVQTLRYSPQTNFAGQVTLSVRVTDETGLKAENDVYLYVKEINDPPEIYLPGDDGSPSIQTNAGDSGDILVGIVITDVDVGDRRNALSLKFSPVSGTVSVSAERAIGVWIVDEATAGPQETLILRGSLESLQTALDGGSISYSTPASFSGRDTVTIEADDGGNCGGGGAGTKSSWSISSLRISVGWLNDPP--TVDAPRSIVAARGTLESLVSGIRITDPDVADAPEGRGRLDVSLSTSMGGRLALDEMVALRNGLRNDGVDGHQVHLLGRPEYINNVLETLVFSCVNMTNDAKYADGAFIDELFLRVSDLGFSGSGGEQLATTSIVVKVGPLTP 999
            + +T   +P  +  G + + V   D  G    +   L ++ +ND P I       +P   +   D  + L GI  TDVD G     + + F   SGT++ S+   + V        G   +L L G ++++ + L  G ++Y+T  + +   T+TIE DD GN G GGA + +S    ++ + V  +ND P  TV   +++        S  +G +I+   V+D   G   ++++L+ S  G ++L     L N  +  G +   +  +G    +NN L  L +     T        A ++   +  +D GFSGSGG Q  T  I + + P+ P
Sbjct:  659 ISRTFSGTPGNDDTGSIAIEVIANDGNGGAVSDSFELSIQGVNDAPVI------SAPLTISVFEDEPEALTGISFTDVDAGSAD--VLVTFEVGSGTLAASSANGVTV-------GGNSSSLTLTGRVDAINSFLANGELTYTTSLNNTEAVTLTIEIDDQGNTGSGGAESDNS----TVSLVVTAVNDAPVNTVPGAQNVAQNETLTFSAGNGNQIS---VSDVDLGSNAIEITLTAS-NGLISLASTTGL-NFTQGSGTNDGIMTFIGSLVDVNNALNGLTY-----TPTPGLVGSASLE---ITSNDQGFSGSGGAQTDTDVISIIINPINP 961          
BLAST of mRNA_H-elongata_contig66416.14238.1 vs. uniprot
Match: A0A8D6SFZ3_9CYAN (Uncharacterized protein n=1 Tax=Calothrix sp. PCC 7716 TaxID=2853227 RepID=A0A8D6SFZ3_9CYAN)

HSP 1 Score: 76.6 bits (187), Expect = 1.430e-11
Identity = 99/341 (29.03%), Postives = 157/341 (46.04%), Query Frame = 1
Query:   13 LRYSPQTNFAGQVTLSVRVTD--ETG----LKAENDVYLYVKEINDPP-EIYLPG----DDGSPSIQTNAGDSGDILVGIVITDVDV-GDRRNAL---SLKFSPVSGTVSVSAERAIGVWIVDEATAGPQETLILRGSLESLQTALDGGSISYSTPASFSGRDTVTIEADDGGNCGGGGAGTKSSWSISSLRISVGWLNDPP--TVDAPRSIVAARGTLESLVSGIRITDPDVADAPEGRGRLDVSLSTSMGGRLALDEMVALRNGLRNDGVDGHQVHLLGRPEYINNVLETLVFSCVNMTNDAKYADGAFIDELFLRVSDLGFSGSGGEQLATTSIVVKV 984
            L Y    N+ G  TL++   D   TG    LK  + V + +  +NDPP    +PG    ++ +  I  +A  +      I I+DVDV GD+  A+    +  +   G ++++  +  G+  V+  T G   T+I+ GS+E++  A+DG  ++Y     F+G DT+T+  +D  N   GGAG    +   S++ISV  +ND P  TV   +S+        +  +G  I+  DV DA EG G  +V LS + G  L L +   L      +G     +   G    IN  L +L +      ND  +      D L +  +D G SG GG    T +I + V
Sbjct: 1679 LVYRGNLNYNGNDTLTITTNDLGNTGSGGILKDVDTVQITLTPVNDPPVNAEIPGAQTINEDTSLIFNSANKNA-----IKISDVDVDGDQNGAVVDVQVTLAVTKGKLTLA--QTTGLTFVEGTTNG-SATVIVTGSVENINKAIDG--LAYIGNQDFNGEDTLTVSINDKSN---GGAG--ELFQKDSVKISVKPINDAPVNTVSNKQSVKEDTDLAFNAANGNSISINDV-DANEGTGETEVKLSVTKG-VLTLQDTTGL-TFKEGNGKGNTVLSFTGNLIDINKALASLTYR----GNDNYHGQ----DTLIITTNDKGNSGDGGILTDTDNIDITV 1993          
BLAST of mRNA_H-elongata_contig66416.14238.1 vs. uniprot
Match: UPI001CB8A98F (Ig-like domain-containing protein n=2 Tax=Pseudomonas stutzeri TaxID=316 RepID=UPI001CB8A98F)

HSP 1 Score: 76.3 bits (186), Expect = 1.880e-11
Identity = 81/267 (30.34%), Postives = 123/267 (46.07%), Query Frame = 1
Query:  208 LVGIVITDVDVGDRRNALSLKFSPVSGTVSVSAERAIGVWIVDEATAGPQETLILRGSLES-LQTALDGGSISYSTPASFSGRDTVTIEADDGGNCGGGGAGTKSSWSISSLRISVGWLNDPP--TVDAPRSIVAARGTLESLVSGIRITDPDVADAPEGRGRLDVSLSTSMGGRLALDEMVALRNGLRNDGVDGHQVHLLGRPEYINNVLETLVFSCVNMTNDAKYADGAFIDELFLRVSDLGFSGSGGEQLATTSIVVKVGPLTP 999
            L GI  +D+D G    A SL  + +  + S++A  A GV      T G            S +   +  G + ++T A+ +   ++TIE +DGGN G GGA + ++  I    + V  +ND P  ++  P+S+      + S  +G  I+   ++D   G G + V+LSTS  G L L     L + +  DG     +  +GR   INN L  LVFS     N A          L +   DLG SGSGG Q  T ++ + V  L+P
Sbjct: 1041 LTGISFSDIDAG----ASSLTVTLLVPSGSLTATSANGV------TVGXXXXXXXXXXXXSDINAFIATGGVLFTTAANATSDVSLTIEVNDGGNTGSGGAKSDTATVI----LDVSAINDAPVNSLPGPQSVDQDATLVFSSGNGNPIS---ISDLDAGSGDVQVTLSTS-NGLLTLGGTTGL-SFIGGDGSFDSSMTFIGRISDINNALNGLVFSPTAGYNGAA--------SLHITTDDLGTSGSGGAQTDTDTLAITVNSLSP 1280          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig66416.14238.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KBW5_9PHAE7.710e-7936.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G6U7_ECTSI9.690e-7035.60Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7Y1BL46_9PSED2.000e-1930.29DUF4347 domain-containing protein n=1 Tax=Pseudomo... [more]
A0A550ECV9_PSEME3.660e-1930.29DUF4347 domain-containing protein n=1 Tax=Pseudomo... [more]
A0A3M2H483_9PSED6.120e-1728.90DUF4347 domain-containing protein n=2 Tax=Pseudomo... [more]
A0A1L7G6Q2_9PSED6.430e-1628.57Uncharacterized protein n=2 Tax=Pseudomonas alcali... [more]
A0A1G9PPS7_9PSED2.650e-1530.36DUF4347 domain-containing protein (Fragment) n=3 T... [more]
A0A4U0P6G8_9SPHI3.840e-1525.97T9SS type B sorting domain-containing protein n=1 ... [more]
A0A8D6SFZ3_9CYAN1.430e-1129.03Uncharacterized protein n=1 Tax=Calothrix sp. PCC ... [more]
UPI001CB8A98F1.880e-1130.34Ig-like domain-containing protein n=2 Tax=Pseudomo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig66416contigH-elongata_contig66416:1813..3345 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score253.8
Seed ortholog evalue1.1e-64
Seed eggNOG ortholog2880.D7G6U7
EggNOG OGs28IVJ@1,2QR77@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons3
Model size999
Cds size999
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig66416.14238.1prot_H-elongata_contig66416.14238.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig66416 1813..3345 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931053.199181-CDS-H-elongata_contig66416:1812..22981622931053.199181-CDS-H-elongata_contig66416:1812..2298Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig66416 1813..2298 -
1691679678.8004851-CDS-H-elongata_contig66416:1812..22981691679678.8004851-CDS-H-elongata_contig66416:1812..2298Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig66416 1813..2298 -
1622931053.2168417-CDS-H-elongata_contig66416:2796..30621622931053.2168417-CDS-H-elongata_contig66416:2796..3062Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig66416 2797..3062 -
1691679678.8101087-CDS-H-elongata_contig66416:2796..30621691679678.8101087-CDS-H-elongata_contig66416:2796..3062Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig66416 2797..3062 -
1622931053.2304032-CDS-H-elongata_contig66416:3098..33451622931053.2304032-CDS-H-elongata_contig66416:3098..3345Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig66416 3099..3345 -
1691679678.818044-CDS-H-elongata_contig66416:3098..33451691679678.818044-CDS-H-elongata_contig66416:3098..3345Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig66416 3099..3345 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig66416.14238.1

>prot_H-elongata_contig66416.14238.1 ID=prot_H-elongata_contig66416.14238.1|Name=mRNA_H-elongata_contig66416.14238.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=333bp
VVQTLRYSPQTNFAGQVTLSVRVTDETGLKAENDVYLYVKEINDPPEIYL
PGDDGSPSIQTNAGDSGDILVGIVITDVDVGDRRNALSLKFSPVSGTVSV
SAERAIGVWIVDEATAGPQETLILRGSLESLQTALDGGSISYSTPASFSG
RDTVTIEADDGGNCGGGGAGTKSSWSISSLRISVGWLNDPPTVDAPRSIV
AARGTLESLVSGIRITDPDVADAPEGRGRLDVSLSTSMGGRLALDEMVAL
RNGLRNDGVDGHQVHLLGRPEYINNVLETLVFSCVNMTNDAKYADGAFID
ELFLRVSDLGFSGSGGEQLATTSIVVKVGPLTP
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mRNA from alignment at H-elongata_contig66416:1813..3345-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig66416.14238.1 ID=mRNA_H-elongata_contig66416.14238.1|Name=mRNA_H-elongata_contig66416.14238.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1533bp|location=Sequence derived from alignment at H-elongata_contig66416:1813..3345- (Himanthalia elongata Himel1 dioecious)
GTCGTACAGACACTGAGGTATAGTCCACAGACAAATTTTGCTGGCCAAGT TACATTGTCAGTGCGCGTAACAGACGAAACTGGATTGAAGGCCGAAAACG ATGTCTACCTGTACGTCAAAGAAATTAACGACCCGCCTGAAATCTACTTG CCAGGGGATGACGGTTCTCCGAGTATACAAACGAACGCAGGAGATAGCGG GGACATTCTTGTAGGCATCGTAATCACGGACGTCGACGTAGGCGACAGTC CTGATGTTTGCACCAATATTCTAGGACTAGAAGGGAGGAATGCTCTGTCA TTGAAATTCTCCCCGGTTTCTGGAACAGTGTCTGTATCGGCGGAACGTGC AATTGGTGTATGGATAGTCGATGAGGCCACCGCTGGCCCTCAGGAGACCT TGATTCTTCGAGGATCTCTCGAATCCCTCCAGACTGCACTTGATGGGGGT AGTATATCATACAGCACCCCTGCGAGCTTTTCAGGGCGAGACACTGTAAC AATAGAGGCTGATGATGGCGGCAACTGCGGGGGCGGGGGAGCAGGAACAG TTCACCGTAATCTTTATGTCGAAGTTAAGCCATACGAACCACCAATTTTA GTAGAATTCGACACATCTGACTCACCCAACGCTGTGCTCTTCACGCAAGA AGGAAAACCGTTAGCACTGCCTGCTGCCTTCGTAACGGGCGGCTCGATCA AGGAACGTGCCGCCGTGGAAGTAGTTATTCTTGCCGTCTCCGGTAACATT ACGCCCCAGCTAAATGGTCTGGACAAAATCGAAGTACTTGACAGTACCGG GACACCCGGTGAGAGGATATGCGTCAGGGGCTCACCCGCAGCGCTCCGTA CAGCTCTCACAAGCTTGTCGTTCGAACCCCGTCCGAATTTCTACGGATGC TGGGATCGCAATGGTTCGTGCACCGACGGCACTCCTGTACGCTCTTCACG TGTACAAGGGGTCCAAGCATTGGCTCGCGTTTTCGCTGTTGGCACTCCAC AGGGAGAAGGGGTGGACGTTGTATTCGACGGGTTCAGTATCAAGCAGAAA TCATCGTGGTCCATCTCGTCGTTGAGGATTTCTGTAGGGTGGCTGAACGA CCCGCCGACGGTTGACGCACCAAGGTCCATCGTCGCTGCCCGAGGGACTC TTGAATCGCTCGTTTCGGGTATTCGCATCACAGATCCGGATGTTGCGGAT GCCCCAGAAGGCCGGGGTCGACTGGACGTAAGCTTGTCGACATCGATGGG AGGCAGGCTAGCTCTGGATGAGATGGTCGCGTTGAGGAATGGATTACGCA ATGACGGGGTAGATGGACATCAAGTTCATCTTCTTGGCCGCCCAGAATAT ATCAACAACGTTCTTGAGACATTGGTGTTTTCTTGTGTAAACATGACCAA CGATGCCAAGTACGCAGATGGAGCCTTCATCGATGAGTTGTTTTTACGAG TTAGCGATCTCGGATTTTCTGGAAGTGGTGGGGAACAGCTGGCAACCACG TCTATTGTGGTGAAGGTAGGACCGTTGACACCT
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Coding sequence (CDS) from alignment at H-elongata_contig66416:1813..3345-

>mRNA_H-elongata_contig66416.14238.1 ID=mRNA_H-elongata_contig66416.14238.1|Name=mRNA_H-elongata_contig66416.14238.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1998bp|location=Sequence derived from alignment at H-elongata_contig66416:1813..3345- (Himanthalia elongata Himel1 dioecious)
GTCGTACAGACACTGAGGTATAGTCCACAGACAAATTTTGCTGGCCAAGT
TACATTGTCAGTGCGCGTAACAGACGAAACTGGATTGAAGGCCGAAAACG
ATGTCTACCTGTACGTCAAAGAAATTAACGACCCGCCTGAAATCTACTTG
CCAGGGGATGACGGTTCTCCGAGTATACAAACGAACGCAGGAGATAGCGG
GGACATTCTTGTAGGCATCGTAATCACGGACGTCGACGTAGGCGACAGTC
GTACAGACACTGAGGTATAGTCCACAGACAAATTTTGCTGGCCAAGTTAC
ATTGTCAGTGCGCGTAACAGACGAAACTGGATTGAAGGCCGAAAACGATG
TCTACCTGTACGTCAAAGAAATTAACGACCCGCCTGAAATCTACTTGCCA
GGGGATGACGGTTCTCCGAGTATACAAACGAACGCAGGAGATAGCGGGGA
CATTCTTGTAGGCATCGTAATCACGGACGTCGACGTAGGCGACAGGAGGA
ATGCTCTGTCATTGAAATTCTCCCCGGTTTCTGGAACAGTGTCTGTATCG
GCGGAACGTGCAATTGGTGTATGGATAGTCGATGAGGCCACCGCTGGCCC
TCAGGAGACCTTGATTCTTCGAGGATCTCTCGAATCCCTCCAGACTGCAC
TTGATGGGGGTAGTATATCATACAGCACCCCTGCGAGCTTTTCAGGGCGA
GACACTGTAACAATAGAGGCTGATGATGGCGGCAACTGCGGGGGCGGGGG
AGCAGGAACAGGAGGAATGCTCTGTCATTGAAATTCTCCCCGGTTTCTGG
AACAGTGTCTGTATCGGCGGAACGTGCAATTGGTGTATGGATAGTCGATG
AGGCCACCGCTGGCCCTCAGGAGACCTTGATTCTTCGAGGATCTCTCGAA
TCCCTCCAGACTGCACTTGATGGGGGTAGTATATCATACAGCACCCCTGC
GAGCTTTTCAGGGCGAGACACTGTAACAATAGAGGCTGATGATGGCGGCA
ACTGCGGGGGCGGGGGAGCAGGAACAAAATCATCGTGGTCCATCTCGTCG
TTGAGGATTTCTGTAGGGTGGCTGAACGACCCGCCGACGGTTGACGCACC
AAGGTCCATCGTCGCTGCCCGAGGGACTCTTGAATCGCTCGTTTCGGGTA
TTCGCATCACAGATCCGGATGTTGCGGATGCCCCAGAAGGCCGGGGTCGA
CTGGACGTAAGCTTGTCGACATCGATGGGAGGCAGGCTAGCTCTGGATGA
GATGGTCGCGTTGAGGAATGGATTACGCAATGACGGGGTAGATGGACATC
AAGTTCATCTTCTTGGCCGCCCAGAATATATCAACAACGTTCTTGAGACA
TTGGTGTTTTCTTGTGTAAACATGACCAACGATGCCAAGTACGCAGATGG
AGCCTTCATCGATGAGTTGTTTTTACGAGTTAGCGATCTCGGATTTTCTG
GAAGTGGTGGGGAACAGCTGGCAACCACGTCTATTGTGGTGAAGGTAGGA
CCGTTGACACCTAAATCATCGTGGTCCATCTCGTCGTTGAGGATTTCTGT
AGGGTGGCTGAACGACCCGCCGACGGTTGACGCACCAAGGTCCATCGTCG
CTGCCCGAGGGACTCTTGAATCGCTCGTTTCGGGTATTCGCATCACAGAT
CCGGATGTTGCGGATGCCCCAGAAGGCCGGGGTCGACTGGACGTAAGCTT
GTCGACATCGATGGGAGGCAGGCTAGCTCTGGATGAGATGGTCGCGTTGA
GGAATGGATTACGCAATGACGGGGTAGATGGACATCAAGTTCATCTTCTT
GGCCGCCCAGAATATATCAACAACGTTCTTGAGACATTGGTGTTTTCTTG
TGTAAACATGACCAACGATGCCAAGTACGCAGATGGAGCCTTCATCGATG
AGTTGTTTTTACGAGTTAGCGATCTCGGATTTTCTGGAAGTGGTGGGGAA
CAGCTGGCAACCACGTCTATTGTGGTGAAGGTAGGACCGTTGACACCT
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