mRNA_H-elongata_contig66083.14199.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig66083.14199.1
Unique NamemRNA_H-elongata_contig66083.14199.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig66083.14199.1 vs. uniprot
Match: D7FV54_ECTSI (Brix domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV54_ECTSI)

HSP 1 Score: 481 bits (1238), Expect = 4.850e-168
Identity = 238/275 (86.55%), Postives = 261/275 (94.91%), Query Frame = 1
Query:    1 MPSKGGRRKKTRTHMVGPPVGAFGAPETELTEKAPKTFVLRKGRVHANVSDLVEEMRRVMEPNTARKLRERTKNSVKDYVSVSSVLGVTHLLVFSQTDKSLSFRVCRTPSGPTLTFKVHQFSLMKHIRALQKRPQQVNHVYKTAPLVVLNNFGDKEASSQVKLMKVTLQNMFPSINVATVKLQDCRRVVMFNLDKTSGHVELRHYAVRATPTGITKAIKKVVQAKVPDLHALDDISEYVAGGMGGGASDSEVEDEESKIMLPEDYVGRGNVKSQK 825
            MP+KGGRR+KTRTH+VGPP GA GAPE+E+TEK PK+FVL+KG+VH+NVSDL EEMRRVMEP+TARKLRER KN+VKDYVSVSSVLGVTHLLVF+QTDKSLS RVCRTP+GPTLTFKV QFSLM+H+RALQKRP +VN  YKT+PLVVLNNFGDK+ASSQVKLMKVTLQNMFPSINVATVKLQDCRRVVMFNLDKT+G VE+RH+AVRATPTGITKAIKKVVQAKVPDLH L+DISEYVAGGMGGG SDSEVEDEESKI LP+DYVGRGNVKSQK
Sbjct:    1 MPTKGGRRRKTRTHVVGPPSGAVGAPESEMTEKVPKSFVLKKGKVHSNVSDLAEEMRRVMEPHTARKLRERAKNTVKDYVSVSSVLGVTHLLVFTQTDKSLSLRVCRTPTGPTLTFKVQQFSLMRHVRALQKRPVEVNQAYKTSPLVVLNNFGDKQASSQVKLMKVTLQNMFPSINVATVKLQDCRRVVMFNLDKTNGTVEMRHFAVRATPTGITKAIKKVVQAKVPDLHGLEDISEYVAGGMGGGISDSEVEDEESKITLPDDYVGRGNVKSQK 275          
BLAST of mRNA_H-elongata_contig66083.14199.1 vs. uniprot
Match: A0A6H5KLG7_9PHAE (Brix domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLG7_9PHAE)

HSP 1 Score: 450 bits (1158), Expect = 1.740e-155
Identity = 235/322 (72.98%), Postives = 258/322 (80.12%), Query Frame = 1
Query:    1 MPSKGGRRKKTRTHMVGPPVGAFGAPETELTEKAPKTFVLRKGRVHANVSDLVEEMRRVMEPNTARKLRERTKNSVKDYVSVSSVLGVTHLLVFSQTDKSLSFRVCRTPSGPTLTFKVHQFSLMKHIRALQKRPQQVNHVYKTAPLVVLNNFGDKEASSQVKLMKVTLQNMFPSINVATVKLQDCRRVVMFNLDKTSGHVELRHYAVRATPTGITKAIKKV-----------------------------------------------VQAKVPDLHALDDISEYVAGGMGGGASDSEVEDEESKIMLPEDYVGRGNVKSQK 825
            MP+KGGRR+KTRTH+VG P GA GAPE+E+TEK PK+FVL+KG+VH+NVSDL EEMRRVMEP+TARKLRER KN+VKDYVSVSSVLGVTHLLVF+QTDKSLS RVCRTP+GPTLTFKV QFSLM+H+RALQKRP +VN  YKT+PLVVLNNFGDK+ASSQVKLMKVTLQNMFPSINVATVKLQDCRRVVMFNLDKT+G VE+RH+AVRATPTGI KAI KV                                               VQAKVPDLH L+DISEYVAGGMGGG SDSEVEDEESKI LP+DYVGRGNVKSQK
Sbjct:    1 MPTKGGRRRKTRTHVVGFPSGAVGAPESEMTEKVPKSFVLKKGKVHSNVSDLAEEMRRVMEPHTARKLRERAKNTVKDYVSVSSVLGVTHLLVFTQTDKSLSLRVCRTPTGPTLTFKVRQFSLMRHVRALQKRPVEVNQAYKTSPLVVLNNFGDKQASSQVKLMKVTLQNMFPSINVATVKLQDCRRVVMFNLDKTNGTVEMRHFAVRATPTGIAKAITKVARSCACVYDGLVRVSSMDTRDSRREPGNVRLPRANKCCGFGVIFLQVVQAKVPDLHGLEDISEYVAGGMGGGISDSEVEDEESKITLPDDYVGRGNVKSQK 322          
BLAST of mRNA_H-elongata_contig66083.14199.1 vs. uniprot
Match: A0A835ZHT7_9STRA (Brix domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHT7_9STRA)

HSP 1 Score: 363 bits (931), Expect = 3.490e-122
Identity = 180/275 (65.45%), Postives = 221/275 (80.36%), Query Frame = 1
Query:    1 MPSKGGRRKKTRTHMVGPPVGAFGAPETELTEKAPKTFVLRKGRVHANVSDLVEEMRRVMEPNTARKLRERTKNSVKDYVSVSSVLGVTHLLVFSQTDKSLSFRVCRTPSGPTLTFKVHQFSLMKHIRALQKRPQQVNHVYKTAPLVVLNNFGDKEASSQVKLMKVTLQNMFPSINVATVKLQDCRRVVMFNLDKTSGHVELRHYAVRATPTGITKAIKKVVQAKVPDLHALDDISEYVAGGMGGGASDSEVEDEESKIMLPEDYVGRGNVKSQK 825
            MP KGG+RKKT TH+V PP G  GA E    +K P++FV + G+V   V++LVEEMR VMEPNTARKLRER+ NS+KD+  VS   GVTHL+ F QT++SL++R+ R P GPTLTFKV+Q+ L +H+RALQ+RP +    +KTAPLVVLNNFGD  A  ++KLMKVTLQNMFP+INVA VKL DCRR+V+FN DK +  VE+RHYA+RA PTGI KAIKKVVQAKVP+LH LDDI+EYV GG GG ASDSEV+DEESK++LP+ Y GRGNVK+Q+
Sbjct:    1 MPRKGGKRKKTHTHVVPPPEGTPGAEE----DKVPRSFVFKLGKVAKQVNELVEEMRGVMEPNTARKLRERSSNSLKDFAVVSKPFGVTHLMAFGQTERSLTYRIARAPDGPTLTFKVNQYCLRRHVRALQRRPVETTQAFKTAPLVVLNNFGDASAPQELKLMKVTLQNMFPTINVAEVKLADCRRIVLFNYDKATKSVEMRHYAIRAMPTGINKAIKKVVQAKVPNLHNLDDIAEYVQGG-GGAASDSEVDDEESKVVLPDRYGGRGNVKAQR 270          
BLAST of mRNA_H-elongata_contig66083.14199.1 vs. uniprot
Match: A0A6V1TY31_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1TY31_HETAK)

HSP 1 Score: 283 bits (723), Expect = 4.870e-90
Identity = 148/276 (53.62%), Postives = 196/276 (71.01%), Query Frame = 1
Query:    1 MPSKGGRRKKTRTHMVGPPVGAFGAPETELTEKAPKTFVLRKGRVHANVSDLVEEMRRVMEPNTARKLRERTKNSVKDYVSVSSVLGVTHLLVFSQTDKSLSFRVCRTPSGPTLTFKVHQFSLMKHIRALQKRPQQVNHVYKTAPLVVLNNFGDKEASSQVKLMKVTLQNMFPSINVATVKLQDCRRVVMFNLDKTSGHVELRHYAVRATPTGITKAIKKVVQAKVPDLHALDDISEYV-AGGMGGGASDSEVEDEESKIMLPEDYVGRGNVKSQK 825
            MP KGG+R+K RTH    P GA    + E  EK P++FV +  +V   V  L+ ++R+VM P TA KL+ER KNSVKDY+SV+   GVTH LV SQT+ +++ +V RTP GPTL+FKV Q++L K I A QK+P     VY+  PLVVLNNF D    + VKLM+VT QNMFP INV T+KL DCRRVV+F+  K    VE+RHY++RA PTGI++++K+VVQA++P+L  L D+SE++ +    G ASDSE EDEESK+ L + Y GRGNV+SQ+
Sbjct:    1 MPKKGGKRRKRRTHASAAPKGA----QIEGEEKVPRSFVFKNKKVSQYVQQLIADLRQVMAPYTALKLKERKKNSVKDYLSVAGTFGVTHFLVLSQTEAAVNLKVARTPQGPTLSFKVEQYTLCKSIVATQKKPYGPALVYQCPPLVVLNNFADA-TEAHVKLMRVTFQNMFPPINVQTIKLADCRRVVLFHYLKEDQTVEVRHYSIRAVPTGISRSVKRVVQARLPNLSRLRDVSEFLTSAAAAGAASDSEGEDEESKVELAQRYAGRGNVQSQQ 271          
BLAST of mRNA_H-elongata_contig66083.14199.1 vs. uniprot
Match: K3WA45_GLOUD (Brix domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WA45_GLOUD)

HSP 1 Score: 275 bits (702), Expect = 7.690e-87
Identity = 143/278 (51.44%), Postives = 198/278 (71.22%), Query Frame = 1
Query:    1 MPSKGGRRKKTRTHMVGPPVGAFGAPETELTEKAPKTFVLRKGRVHANVSDLVEEMRRVMEPNTARKLRERTKNSVKDYVSVSSVLGVTHLLVFSQTDKSLSFRVCRTPSGPTLTFKVHQFSLMKHIRALQKRPQQVNHVYKTAPLVVLNNF-GDKEASSQVKLMKVTLQNMFPSINVATVKLQDCRRVVMFNLDKTSGHVELRHYAVRATPTGITKAIKKVVQAKVPDLHALDDISEYVAG-GMGGGA-SDSEVEDEESKIMLPEDYVGRGNVKSQK 825
            MP KGGRR+KTRTH+V        AP +E  +  P +FV + G+V + VS LV++MRRVM P TA KLRE+ KN++KD+V + + LGVTH + F+ T+   + ++ R P GPTL+FKV  +SLM+H+  + KRP   +   KT PLVVLNNF GD++    +KLM  T QNMFP+I+V TV+L +CRRVV+FN +K + HVE R Y VRATP GI+K++K +V+AK+P+L  L+DISEY+ G G G GA SDSE++DE + + LP+ + GRGN K++K
Sbjct:    1 MPRKGGRRRKTRTHVVE-------APGSEK-DSTPMSFVFKMGKVPSVVSTLVQDMRRVMAPYTADKLREKRKNTIKDFVHIGAPLGVTHFIFFTNTEAGTNLKIARIPRGPTLSFKVVGYSLMRHLHLIHKRPVDASLAMKTKPLVVLNNFTGDED---HIKLMNATFQNMFPAIDVQTVQLSECRRVVLFNYEKETDHVEFRQYVVRATPLGISKSVKTIVKAKIPNLAKLEDISEYIMGNGAGAGATSDSEIDDESAHVTLPDSFRGRGNRKAEK 267          
BLAST of mRNA_H-elongata_contig66083.14199.1 vs. uniprot
Match: W7U3H8_9STRA (Brix domain protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U3H8_9STRA)

HSP 1 Score: 272 bits (695), Expect = 1.580e-86
Identity = 140/276 (50.72%), Postives = 187/276 (67.75%), Query Frame = 1
Query:   16 GRRKKTRTHMVGPPVGAFGAPETELTEKAPKTFVLRKGRVHANVSDLVEEMRRVMEPNTARKLRERTKNSVKDYVSVSSVLGVTHLLVFSQTDKSLSFRVCRTPSGPTLTFKVHQFSLMKHIRALQKRPQQVNHVYKTAPLVVLNNFGDKEASSQVKLMKVTLQNMFPSINVATVKLQDCRRVVMFNLDKTSGHVELRHYAVRATPTGITKAIKKVVQAKVPDLHALDDISEYVAG------GMGGGASDSEVEDEESKIMLPEDYVGRGNVKSQK 825
            G+R+K RTH+   PV           E+ PKT VLRKGR       LV E+RR+M P TA +L+ER  N +KD+ +V+  LG+TH+L  SQT  SLS  + R P GPTLTFKV ++ L  H+RA QKRP +    Y+TAPLVVLNNFGD  +   VKLMK+T QNMFP +NV TV+L DCRR+V+++ +  +G VE RH+A+RA P+ + K++K++VQ K+P L  + DISE++ G      G  G ASDSEVEDE S ++LP+ + GRGN+KSQK
Sbjct:    2 GKRRKRRTHV---PVNPEQQQSLTEEERIPKTMVLRKGRTTPEAGALVTELRRLMGPETAARLKERRTNRMKDFAAVAGHLGLTHILSLSQTPASLSLHIARFPRGPTLTFKVERYCLQHHVRATQKRPYESLSAYQTAPLVVLNNFGDVSSPPYVKLMKITFQNMFPPLNVNTVRLTDCRRIVLYDYEADTGVVEQRHFAIRAAPSELHKSVKRLVQTKIPRLGKMTDISEFILGPALQAYGGAGAASDSEVEDEASHVILPDRFRGRGNLKSQK 274          
BLAST of mRNA_H-elongata_contig66083.14199.1 vs. uniprot
Match: A0A1V9ZSR9_9STRA (SWI4 1, Peter Pan-like protein suppressor n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZSR9_9STRA)

HSP 1 Score: 272 bits (696), Expect = 1.140e-85
Identity = 139/276 (50.36%), Postives = 196/276 (71.01%), Query Frame = 1
Query:    1 MPSKGGRRKKTRTHMVGPPVGAFGAPETELTEKAPKTFVLRKGRVHANVSDLVEEMRRVMEPNTARKLRERTKNSVKDYVSVSSVLGVTHLLVFSQTDKSLSFRVCRTPSGPTLTFKVHQFSLMKHIRALQKRPQQVNHVYKTAPLVVLNNFGDKEASSQVKLMKVTLQNMFPSINVATVKLQDCRRVVMFNLDKTSGHVELRHYAVRATPTGITKAIKKVVQAKVPDLHALDDISEYVAGGMGGG-ASDSEVEDEESKIMLPEDYVGRGNVKSQK 825
            MP KGGRR+KTRTH      GA G       EK PK+FV + G+    V +LV++MR+VM P TA KLRE+ KN+++D+V+V++ LGV+H + FS TD   + ++ R P GPTL+FKV  ++LMKH+ A+QKRP   +  +KT+PLVVLNNF   E    VKL+ VT QNMFP+I+V T+ L DCRRVV+F+ DK +GHVE R Y +RA P G++K++K +V++++P+L  ++DIS++V G    G  SDSEV+DE + I+LP+ + GRGN KS+K
Sbjct:    1 MPRKGGRRRKTRTHAAS---GAGGD-----DEKVPKSFVFKMGKAPGCVINLVQDMRQVMLPYTAEKLREKRKNTIQDFVAVAAPLGVSHFVAFSHTDAGTNMKLVRLPRGPTLSFKVVGYTLMKHVHAIQKRPVDASLAFKTSPLVVLNNFNGTE--DHVKLLNVTFQNMFPAIDVQTISLADCRRVVLFHYDKETGHVEFRQYVIRAMPLGLSKSVKTLVKSRIPNLGNVEDISDFVFGNTNTGMTSDSEVDDEAAHIVLPDKFRGRGNQKSEK 266          
BLAST of mRNA_H-elongata_contig66083.14199.1 vs. uniprot
Match: A0A5D6XMW8_9STRA (Brix domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XMW8_9STRA)

HSP 1 Score: 271 bits (694), Expect = 2.220e-85
Identity = 141/278 (50.72%), Postives = 196/278 (70.50%), Query Frame = 1
Query:    1 MPSKGGRRKKTRTHMVGPPVGAFGAPETELTEKAPKTFVLRKGRVHANVSDLVEEMRRVMEPNTARKLRERTKNSVKDYVSVSSVLGVTHLLVFSQTDKSLSFRVCRTPSGPTLTFKVHQFSLMKHIRALQKRPQQVNHVYKTAPLVVLNNF-GDKEASSQVKLMKVTLQNMFPSINVATVKLQDCRRVVMFNLDKTSGHVELRHYAVRATPTGITKAIKKVVQAKVPDLHALDDISEYVAGGMGGGA--SDSEVEDEESKIMLPEDYVGRGNVKSQK 825
            MP KGGRR+KTRTH+         AP T+  +  P++FV + G+V + V  LV++MRRVM P TA  LRE+ KN+++D+V+V + LGVTH + F+ T+   + ++ R P GPTL+FKV  +SLM+H+  +Q+RP   +   KT PLVVLNNF GDK+    +KLM  T QNMFP+I+V TV+L +CRRVV+FN +K +  VE R Y VRATP G++K++K +V+AK+PDL  L+DISE+V GG  GG   SDSEV+DE S + LP+ + GRGN K++K
Sbjct:    1 MPRKGGRRRKTRTHVAE-------APGTDK-DNTPRSFVFKMGKVPSVVQTLVQDMRRVMAPYTADHLREKRKNTLRDFVAVGAPLGVTHFIFFTNTEAGTNLKIARIPRGPTLSFKVVGYSLMRHMHLVQRRPVDSSLAMKTKPLVVLNNFTGDKD---HIKLMNATFQNMFPAIDVQTVQLSECRRVVLFNYEKETDEVEFRQYVVRATPLGLSKSVKAIVKAKIPDLSTLEDISEFVMGGGAGGGVTSDSEVDDEASHVTLPDSFHGRGNRKAEK 267          
BLAST of mRNA_H-elongata_contig66083.14199.1 vs. uniprot
Match: A0A8K1CBH2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CBH2_PYTOL)

HSP 1 Score: 271 bits (692), Expect = 3.550e-85
Identity = 140/280 (50.00%), Postives = 196/280 (70.00%), Query Frame = 1
Query:    1 MPSKGGRRKKTRTHMVGPPVGAFGAPETELTEKAPKTFVLRKGRVHANVSDLVEEMRRVMEPNTARKLRERTKNSVKDYVSVSSVLGVTHLLVFSQTDKSLSFRVCRTPSGPTLTFKVHQFSLMKHIRALQKRPQQVNHVYKTAPLVVLNNFGDKEASSQVKLMKVTLQNMFPSINVATVKLQDCRRVVMFNLDKTSGHVELRHYAVRATPTGITKAIKKVVQAKVPDLHALDDISEYVAGGM-----GGGASDSEVEDEESKIMLPEDYVGRGNVKSQK 825
            MP KGGRR+KTRTH     V    APE + T   P +FV + G+V + VS+LV++MRRVM P TA +LRE+ KN++KD+VS+ + LGVTH + F+ T+ S + ++ R P GPTL+FKV  +SLM+ +  + KRP   +  + ++PLVVLNNF   E    +KLM VT QNMFP+I+V TV+L +CRRVV+FN +K +  VE R Y +RATP G++K++K +V+AK+P+L+ L+DISEYV G       GG  SDSEV+DE + + LP+ + GRGN KS+K
Sbjct:    1 MPKKGGRRRKTRTH-----VAERAAPEDDNT---PMSFVFKMGKVPSVVSELVQDMRRVMAPYTADRLREKRKNTLKDFVSIGAPLGVTHFMFFTSTEASTNMKIARIPRGPTLSFKVVGYSLMRQVHLIHKRPVDASAAFHSSPLVVLNNFTGTE--DHIKLMNVTFQNMFPAIDVQTVQLSECRRVVLFNYEKETDTVEFRQYVIRATPLGLSKSVKTIVRAKIPNLNMLEDISEYVLGNSSRVDNGGVTSDSEVDDETTHVTLPDTFRGRGNQKSEK 270          
BLAST of mRNA_H-elongata_contig66083.14199.1 vs. uniprot
Match: A0A067CMJ3_SAPPC (Brix domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CMJ3_SAPPC)

HSP 1 Score: 270 bits (690), Expect = 9.900e-85
Identity = 141/276 (51.09%), Postives = 192/276 (69.57%), Query Frame = 1
Query:    1 MPSKGGRRKKTRTHMVGPPVGAFGAPETELTEKAPKTFVLRKGRVHANVSDLVEEMRRVMEPNTARKLRERTKNSVKDYVSVSSVLGVTHLLVFSQTDKSLSFRVCRTPSGPTLTFKVHQFSLMKHIRALQKRPQQVNHVYKTAPLVVLNNFGDKEASSQVKLMKVTLQNMFPSINVATVKLQDCRRVVMFNLDKTSGHVELRHYAVRATPTGITKAIKKVVQAKVPDLHALDDISEYVAGGMGGG-ASDSEVEDEESKIMLPEDYVGRGNVKSQK 825
            MP K GRRKKTRTH             TE  E  PK+FV + G+    V +LV++MR+VM P TA KLRE+ KN+++D+V V++ LGV+H L FS TD   + ++ R P GPTL+FKV  +SLMKHI ++QKRP   +  +KT+PLVVLNNF   E    VKL+ VT QNMFP+I+V T+ L DCRRVV+F+ DK +GHVE R Y +RA P G++K++K +V++KVP+L  ++DIS++V G    G  SDSEV+DE + I+LP+ + GRGN KS+K
Sbjct:    1 MPRKAGRRKKTRTHANA---------GTEDYENTPKSFVFKMGKAPGCVINLVQDMRQVMLPYTADKLREKRKNTIQDFVHVAAPLGVSHFLAFSHTDAGTNMKLVRLPRGPTLSFKVVGYSLMKHIHSIQKRPVDASLAFKTSPLVVLNNFTGAE--DHVKLLNVTFQNMFPAIDVQTIALADCRRVVLFHYDKETGHVEFRQYVIRAAPLGLSKSVKTLVKSKVPNLGNVEDISDFVFGNAQTGMTSDSEVDDESAHIVLPDKFRGRGNTKSEK 265          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig66083.14199.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FV54_ECTSI4.850e-16886.55Brix domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5KLG7_9PHAE1.740e-15572.98Brix domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A835ZHT7_9STRA3.490e-12265.45Brix domain-containing protein (Fragment) n=1 Tax=... [more]
A0A6V1TY31_HETAK4.870e-9053.62Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
K3WA45_GLOUD7.690e-8751.44Brix domain-containing protein n=1 Tax=Globisporan... [more]
W7U3H8_9STRA1.580e-8650.72Brix domain protein n=1 Tax=Nannochloropsis gadita... [more]
A0A1V9ZSR9_9STRA1.140e-8550.36SWI4 1, Peter Pan-like protein suppressor n=1 Tax=... [more]
A0A5D6XMW8_9STRA2.220e-8550.72Brix domain-containing protein n=1 Tax=Pythium bra... [more]
A0A8K1CBH2_PYTOL3.550e-8550.00Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A067CMJ3_SAPPC9.900e-8551.09Brix domain-containing protein n=2 Tax=Saprolegnia... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig66083contigH-elongata_contig66083:739..2055 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score485.0
Seed ortholog evalue2.4e-134
Seed eggNOG ortholog2880.D7FV54
Preferred namePPAN
KEGG rclassRC02020,RC02021
KEGG koko:K08387,ko:K14593,ko:K14859
KEGG ReactionR07320,R07321
KEGG Pathwayko00906,ko04080,map00906,map04080
GOsGO:0000003,GO:0000027,GO:0000463,GO:0000470,GO:0000746,GO:0000747,GO:0001558,GO:0001560,GO:0002164,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0007154,GO:0007275,GO:0007276,GO:0007292,GO:0007444,GO:0008150,GO:0008152,GO:0008361,GO:0009605,GO:0009791,GO:0009888,GO:0009987,GO:0009991,GO:0010467,GO:0010876,GO:0016043,GO:0016070,GO:0016072,GO:0019843,GO:0019915,GO:0019953,GO:0022414,GO:0022607,GO:0022613,GO:0022618,GO:0030684,GO:0030687,GO:0031668,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032504,GO:0032535,GO:0032991,GO:0033036,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0035295,GO:0040008,GO:0042254,GO:0042255,GO:0042273,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0044703,GO:0044764,GO:0046483,GO:0048513,GO:0048609,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051179,GO:0051235,GO:0051704,GO:0051716,GO:0060429,GO:0065003,GO:0065007,GO:0065008,GO:0070013,GO:0070925,GO:0071496,GO:0071704,GO:0071826,GO:0071840,GO:0090066,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990904
EggNOG free text desc.ribosomal large subunit assembly
EggNOG OGsKOG2963@1,KOG2963@2759
EC5.3.99.8
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03009,ko04030
Hectar predicted targeting categoryother localisation
Exons4
Model size831
Cds size831
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig66083.14199.1prot_H-elongata_contig66083.14199.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig66083 739..2055 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931049.6559558-CDS-H-elongata_contig66083:738..7621622931049.6559558-CDS-H-elongata_contig66083:738..762Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig66083 739..762 +
1691679677.2911701-CDS-H-elongata_contig66083:738..7621691679677.2911701-CDS-H-elongata_contig66083:738..762Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig66083 739..762 +
1622931049.6754577-CDS-H-elongata_contig66083:919..13331622931049.6754577-CDS-H-elongata_contig66083:919..1333Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig66083 920..1333 +
1691679677.3068688-CDS-H-elongata_contig66083:919..13331691679677.3068688-CDS-H-elongata_contig66083:919..1333Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig66083 920..1333 +
1622931049.6889362-CDS-H-elongata_contig66083:1493..17151622931049.6889362-CDS-H-elongata_contig66083:1493..1715Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig66083 1494..1715 +
1691679677.3190198-CDS-H-elongata_contig66083:1493..17151691679677.3190198-CDS-H-elongata_contig66083:1493..1715Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig66083 1494..1715 +
1622931049.704684-CDS-H-elongata_contig66083:1884..20551622931049.704684-CDS-H-elongata_contig66083:1884..2055Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig66083 1885..2055 +
1691679677.3305535-CDS-H-elongata_contig66083:1884..20551691679677.3305535-CDS-H-elongata_contig66083:1884..2055Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig66083 1885..2055 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig66083.14199.1

>prot_H-elongata_contig66083.14199.1 ID=prot_H-elongata_contig66083.14199.1|Name=mRNA_H-elongata_contig66083.14199.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=277bp
MPSKGGRRKKTRTHMVGPPVGAFGAPETELTEKAPKTFVLRKGRVHANVS
DLVEEMRRVMEPNTARKLRERTKNSVKDYVSVSSVLGVTHLLVFSQTDKS
LSFRVCRTPSGPTLTFKVHQFSLMKHIRALQKRPQQVNHVYKTAPLVVLN
NFGDKEASSQVKLMKVTLQNMFPSINVATVKLQDCRRVVMFNLDKTSGHV
ELRHYAVRATPTGITKAIKKVVQAKVPDLHALDDISEYVAGGMGGGASDS
EVEDEESKIMLPEDYVGRGNVKSQKW*
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mRNA from alignment at H-elongata_contig66083:739..2055+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig66083.14199.1 ID=mRNA_H-elongata_contig66083.14199.1|Name=mRNA_H-elongata_contig66083.14199.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1317bp|location=Sequence derived from alignment at H-elongata_contig66083:739..2055+ (Himanthalia elongata Himel1 dioecious)
ATGCCTTCCAAGGGAGGACGACGAGTGAGTGAACCAAAATTGTACGGTTG GCGTATAGACAGGGACGGTGTTATCAGGAGGTATTCCCCTTCTCATCTGA CGTTAAACTCTCAAGTCAATACGAACGACTGAACCACCGTCTCGTGCAAC TAATATCCATCCATGTATCCTGCCGTAACAGAAAAAGACCCGCACGCACA TGGTGGGTCCGCCAGTGGGGGCCTTTGGAGCTCCCGAAACTGAGCTCACT GAGAAGGCACCGAAGACCTTTGTGCTAAGAAAGGGTAGGGTTCACGCGAA TGTTTCAGATCTAGTGGAGGAGATGCGGCGGGTTATGGAGCCGAATACCG CTCGCAAGCTCCGCGAGCGGACCAAGAACAGCGTCAAGGACTACGTCTCC GTCTCCAGCGTTCTGGGCGTGACTCACCTCCTCGTCTTCTCACAGACTGA CAAAAGCTTGAGCTTTCGCGTGTGTCGAACTCCATCTGGGCCGACGCTGA CTTTTAAGGTTCATCAGTTCTCCCTCATGAAACACATTCGGGCGCTGCAA AAGAGGCCACAACAAGTTAATCACGTATATAAGACGGCTCCCTTGGTGAG TTTATCTAGGAGGTGGAAGATAACGTGCCTTGAAAGGCGAGATCGATCCC GAGCCGCAATTAATCCTGCTCTCGTGTGATTGATCGCTAAACCATTGTGG TCTCACTACTGGAAGGGTTAGTGTACCTTGCTCTCCGCTTTGCTCTCTAT CTCAGGTTGTTCTCAACAACTTCGGAGATAAGGAGGCCTCGTCACAAGTC AAGCTCATGAAGGTCACCCTTCAGAACATGTTCCCATCCATCAATGTGGC AACGGTCAAGCTCCAAGATTGCCGAAGAGTGGTGATGTTCAACCTTGACA AAACTAGTGGTCATGTAGAGTTGAGGCATTATGCTGTGCGCGCCACACCG ACCGGCATCACGAAGGCCATCAAAAAGGTGCAGTGTCGACCGTGACGCCG GCGTCTAATTGTAATCCTGTCAACCGTCGCACCGTAGGGAGAAGTCAAGG CGCTCATCGTATAACGTGATGGAAATCAAATGGGACACGGCGTGAGTCTA GATCACCCCTTACTCTCCTCTTCCCATGGACTACCCTTTTCTGTAGGTGG TACAGGCGAAAGTTCCAGACTTGCACGCCTTAGACGACATCAGTGAGTAT GTTGCTGGAGGCATGGGGGGAGGCGCGTCCGACAGCGAGGTGGAAGACGA GGAGTCAAAGATCATGCTGCCAGAAGACTACGTCGGTAGAGGAAACGTCA AGTCTCAAAAATGGTAA
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Coding sequence (CDS) from alignment at H-elongata_contig66083:739..2055+

>mRNA_H-elongata_contig66083.14199.1 ID=mRNA_H-elongata_contig66083.14199.1|Name=mRNA_H-elongata_contig66083.14199.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1662bp|location=Sequence derived from alignment at H-elongata_contig66083:739..2055+ (Himanthalia elongata Himel1 dioecious)
ATGCCTTCCAAGGGAGGACGACGAATGCCTTCCAAGGGAGGACGACGAAA
AAAGACCCGCACGCACATGGTGGGTCCGCCAGTGGGGGCCTTTGGAGCTC
CCGAAACTGAGCTCACTGAGAAGGCACCGAAGACCTTTGTGCTAAGAAAG
GGTAGGGTTCACGCGAATGTTTCAGATCTAGTGGAGGAGATGCGGCGGGT
TATGGAGCCGAATACCGCTCGCAAGCTCCGCGAGCGGACCAAGAACAGCG
TCAAGGACTACGTCTCCGTCTCCAGCGTTCTGGGCGTGACTCACCTCCTC
GTCTTCTCACAGACTGACAAAAGCTTGAGCTTTCGCGTGTGTCGAACTCC
ATCTGGGCCGACGCTGACTTTTAAGGTTCATCAGTTCTCCCTCATGAAAC
ACATTCGGGCGCTGCAAAAGAGGCCACAACAAGTTAATCACGTATATAAG
ACGGCTCCCTTGAAAAAGACCCGCACGCACATGGTGGGTCCGCCAGTGGG
GGCCTTTGGAGCTCCCGAAACTGAGCTCACTGAGAAGGCACCGAAGACCT
TTGTGCTAAGAAAGGGTAGGGTTCACGCGAATGTTTCAGATCTAGTGGAG
GAGATGCGGCGGGTTATGGAGCCGAATACCGCTCGCAAGCTCCGCGAGCG
GACCAAGAACAGCGTCAAGGACTACGTCTCCGTCTCCAGCGTTCTGGGCG
TGACTCACCTCCTCGTCTTCTCACAGACTGACAAAAGCTTGAGCTTTCGC
GTGTGTCGAACTCCATCTGGGCCGACGCTGACTTTTAAGGTTCATCAGTT
CTCCCTCATGAAACACATTCGGGCGCTGCAAAAGAGGCCACAACAAGTTA
ATCACGTATATAAGACGGCTCCCTTGGTTGTTCTCAACAACTTCGGAGAT
AAGGAGGCCTCGTCACAAGTCAAGCTCATGAAGGTCACCCTTCAGAACAT
GTTCCCATCCATCAATGTGGCAACGGTCAAGCTCCAAGATTGCCGAAGAG
TGGTGATGTTCAACCTTGACAAAACTAGTGGTCATGTAGAGTTGAGGCAT
TATGCTGTGCGCGCCACACCGACCGGCATCACGAAGGCCATCAAAAAGGT
TGTTCTCAACAACTTCGGAGATAAGGAGGCCTCGTCACAAGTCAAGCTCA
TGAAGGTCACCCTTCAGAACATGTTCCCATCCATCAATGTGGCAACGGTC
AAGCTCCAAGATTGCCGAAGAGTGGTGATGTTCAACCTTGACAAAACTAG
TGGTCATGTAGAGTTGAGGCATTATGCTGTGCGCGCCACACCGACCGGCA
TCACGAAGGCCATCAAAAAGGTGGTACAGGCGAAAGTTCCAGACTTGCAC
GCCTTAGACGACATCAGTGAGTATGTTGCTGGAGGCATGGGGGGAGGCGC
GTCCGACAGCGAGGTGGAAGACGAGGAGTCAAAGATCATGCTGCCAGAAG
ACTACGTCGGTAGAGGAAACGTCAAGTCTCAAAAATGGTAAGTGGTACAG
GCGAAAGTTCCAGACTTGCACGCCTTAGACGACATCAGTGAGTATGTTGC
TGGAGGCATGGGGGGAGGCGCGTCCGACAGCGAGGTGGAAGACGAGGAGT
CAAAGATCATGCTGCCAGAAGACTACGTCGGTAGAGGAAACGTCAAGTCT
CAAAAATGGTAA
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