mRNA_H-elongata_contig66083.14199.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig66083.14199.1 vs. uniprot
Match: D7FV54_ECTSI (Brix domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV54_ECTSI) HSP 1 Score: 481 bits (1238), Expect = 4.850e-168 Identity = 238/275 (86.55%), Postives = 261/275 (94.91%), Query Frame = 1
Query: 1 MPSKGGRRKKTRTHMVGPPVGAFGAPETELTEKAPKTFVLRKGRVHANVSDLVEEMRRVMEPNTARKLRERTKNSVKDYVSVSSVLGVTHLLVFSQTDKSLSFRVCRTPSGPTLTFKVHQFSLMKHIRALQKRPQQVNHVYKTAPLVVLNNFGDKEASSQVKLMKVTLQNMFPSINVATVKLQDCRRVVMFNLDKTSGHVELRHYAVRATPTGITKAIKKVVQAKVPDLHALDDISEYVAGGMGGGASDSEVEDEESKIMLPEDYVGRGNVKSQK 825
MP+KGGRR+KTRTH+VGPP GA GAPE+E+TEK PK+FVL+KG+VH+NVSDL EEMRRVMEP+TARKLRER KN+VKDYVSVSSVLGVTHLLVF+QTDKSLS RVCRTP+GPTLTFKV QFSLM+H+RALQKRP +VN YKT+PLVVLNNFGDK+ASSQVKLMKVTLQNMFPSINVATVKLQDCRRVVMFNLDKT+G VE+RH+AVRATPTGITKAIKKVVQAKVPDLH L+DISEYVAGGMGGG SDSEVEDEESKI LP+DYVGRGNVKSQK
Sbjct: 1 MPTKGGRRRKTRTHVVGPPSGAVGAPESEMTEKVPKSFVLKKGKVHSNVSDLAEEMRRVMEPHTARKLRERAKNTVKDYVSVSSVLGVTHLLVFTQTDKSLSLRVCRTPTGPTLTFKVQQFSLMRHVRALQKRPVEVNQAYKTSPLVVLNNFGDKQASSQVKLMKVTLQNMFPSINVATVKLQDCRRVVMFNLDKTNGTVEMRHFAVRATPTGITKAIKKVVQAKVPDLHGLEDISEYVAGGMGGGISDSEVEDEESKITLPDDYVGRGNVKSQK 275
BLAST of mRNA_H-elongata_contig66083.14199.1 vs. uniprot
Match: A0A6H5KLG7_9PHAE (Brix domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLG7_9PHAE) HSP 1 Score: 450 bits (1158), Expect = 1.740e-155 Identity = 235/322 (72.98%), Postives = 258/322 (80.12%), Query Frame = 1
Query: 1 MPSKGGRRKKTRTHMVGPPVGAFGAPETELTEKAPKTFVLRKGRVHANVSDLVEEMRRVMEPNTARKLRERTKNSVKDYVSVSSVLGVTHLLVFSQTDKSLSFRVCRTPSGPTLTFKVHQFSLMKHIRALQKRPQQVNHVYKTAPLVVLNNFGDKEASSQVKLMKVTLQNMFPSINVATVKLQDCRRVVMFNLDKTSGHVELRHYAVRATPTGITKAIKKV-----------------------------------------------VQAKVPDLHALDDISEYVAGGMGGGASDSEVEDEESKIMLPEDYVGRGNVKSQK 825
MP+KGGRR+KTRTH+VG P GA GAPE+E+TEK PK+FVL+KG+VH+NVSDL EEMRRVMEP+TARKLRER KN+VKDYVSVSSVLGVTHLLVF+QTDKSLS RVCRTP+GPTLTFKV QFSLM+H+RALQKRP +VN YKT+PLVVLNNFGDK+ASSQVKLMKVTLQNMFPSINVATVKLQDCRRVVMFNLDKT+G VE+RH+AVRATPTGI KAI KV VQAKVPDLH L+DISEYVAGGMGGG SDSEVEDEESKI LP+DYVGRGNVKSQK
Sbjct: 1 MPTKGGRRRKTRTHVVGFPSGAVGAPESEMTEKVPKSFVLKKGKVHSNVSDLAEEMRRVMEPHTARKLRERAKNTVKDYVSVSSVLGVTHLLVFTQTDKSLSLRVCRTPTGPTLTFKVRQFSLMRHVRALQKRPVEVNQAYKTSPLVVLNNFGDKQASSQVKLMKVTLQNMFPSINVATVKLQDCRRVVMFNLDKTNGTVEMRHFAVRATPTGIAKAITKVARSCACVYDGLVRVSSMDTRDSRREPGNVRLPRANKCCGFGVIFLQVVQAKVPDLHGLEDISEYVAGGMGGGISDSEVEDEESKITLPDDYVGRGNVKSQK 322
BLAST of mRNA_H-elongata_contig66083.14199.1 vs. uniprot
Match: A0A835ZHT7_9STRA (Brix domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHT7_9STRA) HSP 1 Score: 363 bits (931), Expect = 3.490e-122 Identity = 180/275 (65.45%), Postives = 221/275 (80.36%), Query Frame = 1
Query: 1 MPSKGGRRKKTRTHMVGPPVGAFGAPETELTEKAPKTFVLRKGRVHANVSDLVEEMRRVMEPNTARKLRERTKNSVKDYVSVSSVLGVTHLLVFSQTDKSLSFRVCRTPSGPTLTFKVHQFSLMKHIRALQKRPQQVNHVYKTAPLVVLNNFGDKEASSQVKLMKVTLQNMFPSINVATVKLQDCRRVVMFNLDKTSGHVELRHYAVRATPTGITKAIKKVVQAKVPDLHALDDISEYVAGGMGGGASDSEVEDEESKIMLPEDYVGRGNVKSQK 825
MP KGG+RKKT TH+V PP G GA E +K P++FV + G+V V++LVEEMR VMEPNTARKLRER+ NS+KD+ VS GVTHL+ F QT++SL++R+ R P GPTLTFKV+Q+ L +H+RALQ+RP + +KTAPLVVLNNFGD A ++KLMKVTLQNMFP+INVA VKL DCRR+V+FN DK + VE+RHYA+RA PTGI KAIKKVVQAKVP+LH LDDI+EYV GG GG ASDSEV+DEESK++LP+ Y GRGNVK+Q+
Sbjct: 1 MPRKGGKRKKTHTHVVPPPEGTPGAEE----DKVPRSFVFKLGKVAKQVNELVEEMRGVMEPNTARKLRERSSNSLKDFAVVSKPFGVTHLMAFGQTERSLTYRIARAPDGPTLTFKVNQYCLRRHVRALQRRPVETTQAFKTAPLVVLNNFGDASAPQELKLMKVTLQNMFPTINVAEVKLADCRRIVLFNYDKATKSVEMRHYAIRAMPTGINKAIKKVVQAKVPNLHNLDDIAEYVQGG-GGAASDSEVDDEESKVVLPDRYGGRGNVKAQR 270
BLAST of mRNA_H-elongata_contig66083.14199.1 vs. uniprot
Match: A0A6V1TY31_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1TY31_HETAK) HSP 1 Score: 283 bits (723), Expect = 4.870e-90 Identity = 148/276 (53.62%), Postives = 196/276 (71.01%), Query Frame = 1
Query: 1 MPSKGGRRKKTRTHMVGPPVGAFGAPETELTEKAPKTFVLRKGRVHANVSDLVEEMRRVMEPNTARKLRERTKNSVKDYVSVSSVLGVTHLLVFSQTDKSLSFRVCRTPSGPTLTFKVHQFSLMKHIRALQKRPQQVNHVYKTAPLVVLNNFGDKEASSQVKLMKVTLQNMFPSINVATVKLQDCRRVVMFNLDKTSGHVELRHYAVRATPTGITKAIKKVVQAKVPDLHALDDISEYV-AGGMGGGASDSEVEDEESKIMLPEDYVGRGNVKSQK 825
MP KGG+R+K RTH P GA + E EK P++FV + +V V L+ ++R+VM P TA KL+ER KNSVKDY+SV+ GVTH LV SQT+ +++ +V RTP GPTL+FKV Q++L K I A QK+P VY+ PLVVLNNF D + VKLM+VT QNMFP INV T+KL DCRRVV+F+ K VE+RHY++RA PTGI++++K+VVQA++P+L L D+SE++ + G ASDSE EDEESK+ L + Y GRGNV+SQ+
Sbjct: 1 MPKKGGKRRKRRTHASAAPKGA----QIEGEEKVPRSFVFKNKKVSQYVQQLIADLRQVMAPYTALKLKERKKNSVKDYLSVAGTFGVTHFLVLSQTEAAVNLKVARTPQGPTLSFKVEQYTLCKSIVATQKKPYGPALVYQCPPLVVLNNFADA-TEAHVKLMRVTFQNMFPPINVQTIKLADCRRVVLFHYLKEDQTVEVRHYSIRAVPTGISRSVKRVVQARLPNLSRLRDVSEFLTSAAAAGAASDSEGEDEESKVELAQRYAGRGNVQSQQ 271
BLAST of mRNA_H-elongata_contig66083.14199.1 vs. uniprot
Match: K3WA45_GLOUD (Brix domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WA45_GLOUD) HSP 1 Score: 275 bits (702), Expect = 7.690e-87 Identity = 143/278 (51.44%), Postives = 198/278 (71.22%), Query Frame = 1
Query: 1 MPSKGGRRKKTRTHMVGPPVGAFGAPETELTEKAPKTFVLRKGRVHANVSDLVEEMRRVMEPNTARKLRERTKNSVKDYVSVSSVLGVTHLLVFSQTDKSLSFRVCRTPSGPTLTFKVHQFSLMKHIRALQKRPQQVNHVYKTAPLVVLNNF-GDKEASSQVKLMKVTLQNMFPSINVATVKLQDCRRVVMFNLDKTSGHVELRHYAVRATPTGITKAIKKVVQAKVPDLHALDDISEYVAG-GMGGGA-SDSEVEDEESKIMLPEDYVGRGNVKSQK 825
MP KGGRR+KTRTH+V AP +E + P +FV + G+V + VS LV++MRRVM P TA KLRE+ KN++KD+V + + LGVTH + F+ T+ + ++ R P GPTL+FKV +SLM+H+ + KRP + KT PLVVLNNF GD++ +KLM T QNMFP+I+V TV+L +CRRVV+FN +K + HVE R Y VRATP GI+K++K +V+AK+P+L L+DISEY+ G G G GA SDSE++DE + + LP+ + GRGN K++K
Sbjct: 1 MPRKGGRRRKTRTHVVE-------APGSEK-DSTPMSFVFKMGKVPSVVSTLVQDMRRVMAPYTADKLREKRKNTIKDFVHIGAPLGVTHFIFFTNTEAGTNLKIARIPRGPTLSFKVVGYSLMRHLHLIHKRPVDASLAMKTKPLVVLNNFTGDED---HIKLMNATFQNMFPAIDVQTVQLSECRRVVLFNYEKETDHVEFRQYVVRATPLGISKSVKTIVKAKIPNLAKLEDISEYIMGNGAGAGATSDSEIDDESAHVTLPDSFRGRGNRKAEK 267
BLAST of mRNA_H-elongata_contig66083.14199.1 vs. uniprot
Match: W7U3H8_9STRA (Brix domain protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U3H8_9STRA) HSP 1 Score: 272 bits (695), Expect = 1.580e-86 Identity = 140/276 (50.72%), Postives = 187/276 (67.75%), Query Frame = 1
Query: 16 GRRKKTRTHMVGPPVGAFGAPETELTEKAPKTFVLRKGRVHANVSDLVEEMRRVMEPNTARKLRERTKNSVKDYVSVSSVLGVTHLLVFSQTDKSLSFRVCRTPSGPTLTFKVHQFSLMKHIRALQKRPQQVNHVYKTAPLVVLNNFGDKEASSQVKLMKVTLQNMFPSINVATVKLQDCRRVVMFNLDKTSGHVELRHYAVRATPTGITKAIKKVVQAKVPDLHALDDISEYVAG------GMGGGASDSEVEDEESKIMLPEDYVGRGNVKSQK 825
G+R+K RTH+ PV E+ PKT VLRKGR LV E+RR+M P TA +L+ER N +KD+ +V+ LG+TH+L SQT SLS + R P GPTLTFKV ++ L H+RA QKRP + Y+TAPLVVLNNFGD + VKLMK+T QNMFP +NV TV+L DCRR+V+++ + +G VE RH+A+RA P+ + K++K++VQ K+P L + DISE++ G G G ASDSEVEDE S ++LP+ + GRGN+KSQK
Sbjct: 2 GKRRKRRTHV---PVNPEQQQSLTEEERIPKTMVLRKGRTTPEAGALVTELRRLMGPETAARLKERRTNRMKDFAAVAGHLGLTHILSLSQTPASLSLHIARFPRGPTLTFKVERYCLQHHVRATQKRPYESLSAYQTAPLVVLNNFGDVSSPPYVKLMKITFQNMFPPLNVNTVRLTDCRRIVLYDYEADTGVVEQRHFAIRAAPSELHKSVKRLVQTKIPRLGKMTDISEFILGPALQAYGGAGAASDSEVEDEASHVILPDRFRGRGNLKSQK 274
BLAST of mRNA_H-elongata_contig66083.14199.1 vs. uniprot
Match: A0A1V9ZSR9_9STRA (SWI4 1, Peter Pan-like protein suppressor n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZSR9_9STRA) HSP 1 Score: 272 bits (696), Expect = 1.140e-85 Identity = 139/276 (50.36%), Postives = 196/276 (71.01%), Query Frame = 1
Query: 1 MPSKGGRRKKTRTHMVGPPVGAFGAPETELTEKAPKTFVLRKGRVHANVSDLVEEMRRVMEPNTARKLRERTKNSVKDYVSVSSVLGVTHLLVFSQTDKSLSFRVCRTPSGPTLTFKVHQFSLMKHIRALQKRPQQVNHVYKTAPLVVLNNFGDKEASSQVKLMKVTLQNMFPSINVATVKLQDCRRVVMFNLDKTSGHVELRHYAVRATPTGITKAIKKVVQAKVPDLHALDDISEYVAGGMGGG-ASDSEVEDEESKIMLPEDYVGRGNVKSQK 825
MP KGGRR+KTRTH GA G EK PK+FV + G+ V +LV++MR+VM P TA KLRE+ KN+++D+V+V++ LGV+H + FS TD + ++ R P GPTL+FKV ++LMKH+ A+QKRP + +KT+PLVVLNNF E VKL+ VT QNMFP+I+V T+ L DCRRVV+F+ DK +GHVE R Y +RA P G++K++K +V++++P+L ++DIS++V G G SDSEV+DE + I+LP+ + GRGN KS+K
Sbjct: 1 MPRKGGRRRKTRTHAAS---GAGGD-----DEKVPKSFVFKMGKAPGCVINLVQDMRQVMLPYTAEKLREKRKNTIQDFVAVAAPLGVSHFVAFSHTDAGTNMKLVRLPRGPTLSFKVVGYTLMKHVHAIQKRPVDASLAFKTSPLVVLNNFNGTE--DHVKLLNVTFQNMFPAIDVQTISLADCRRVVLFHYDKETGHVEFRQYVIRAMPLGLSKSVKTLVKSRIPNLGNVEDISDFVFGNTNTGMTSDSEVDDEAAHIVLPDKFRGRGNQKSEK 266
BLAST of mRNA_H-elongata_contig66083.14199.1 vs. uniprot
Match: A0A5D6XMW8_9STRA (Brix domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XMW8_9STRA) HSP 1 Score: 271 bits (694), Expect = 2.220e-85 Identity = 141/278 (50.72%), Postives = 196/278 (70.50%), Query Frame = 1
Query: 1 MPSKGGRRKKTRTHMVGPPVGAFGAPETELTEKAPKTFVLRKGRVHANVSDLVEEMRRVMEPNTARKLRERTKNSVKDYVSVSSVLGVTHLLVFSQTDKSLSFRVCRTPSGPTLTFKVHQFSLMKHIRALQKRPQQVNHVYKTAPLVVLNNF-GDKEASSQVKLMKVTLQNMFPSINVATVKLQDCRRVVMFNLDKTSGHVELRHYAVRATPTGITKAIKKVVQAKVPDLHALDDISEYVAGGMGGGA--SDSEVEDEESKIMLPEDYVGRGNVKSQK 825
MP KGGRR+KTRTH+ AP T+ + P++FV + G+V + V LV++MRRVM P TA LRE+ KN+++D+V+V + LGVTH + F+ T+ + ++ R P GPTL+FKV +SLM+H+ +Q+RP + KT PLVVLNNF GDK+ +KLM T QNMFP+I+V TV+L +CRRVV+FN +K + VE R Y VRATP G++K++K +V+AK+PDL L+DISE+V GG GG SDSEV+DE S + LP+ + GRGN K++K
Sbjct: 1 MPRKGGRRRKTRTHVAE-------APGTDK-DNTPRSFVFKMGKVPSVVQTLVQDMRRVMAPYTADHLREKRKNTLRDFVAVGAPLGVTHFIFFTNTEAGTNLKIARIPRGPTLSFKVVGYSLMRHMHLVQRRPVDSSLAMKTKPLVVLNNFTGDKD---HIKLMNATFQNMFPAIDVQTVQLSECRRVVLFNYEKETDEVEFRQYVVRATPLGLSKSVKAIVKAKIPDLSTLEDISEFVMGGGAGGGVTSDSEVDDEASHVTLPDSFHGRGNRKAEK 267
BLAST of mRNA_H-elongata_contig66083.14199.1 vs. uniprot
Match: A0A8K1CBH2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CBH2_PYTOL) HSP 1 Score: 271 bits (692), Expect = 3.550e-85 Identity = 140/280 (50.00%), Postives = 196/280 (70.00%), Query Frame = 1
Query: 1 MPSKGGRRKKTRTHMVGPPVGAFGAPETELTEKAPKTFVLRKGRVHANVSDLVEEMRRVMEPNTARKLRERTKNSVKDYVSVSSVLGVTHLLVFSQTDKSLSFRVCRTPSGPTLTFKVHQFSLMKHIRALQKRPQQVNHVYKTAPLVVLNNFGDKEASSQVKLMKVTLQNMFPSINVATVKLQDCRRVVMFNLDKTSGHVELRHYAVRATPTGITKAIKKVVQAKVPDLHALDDISEYVAGGM-----GGGASDSEVEDEESKIMLPEDYVGRGNVKSQK 825
MP KGGRR+KTRTH V APE + T P +FV + G+V + VS+LV++MRRVM P TA +LRE+ KN++KD+VS+ + LGVTH + F+ T+ S + ++ R P GPTL+FKV +SLM+ + + KRP + + ++PLVVLNNF E +KLM VT QNMFP+I+V TV+L +CRRVV+FN +K + VE R Y +RATP G++K++K +V+AK+P+L+ L+DISEYV G GG SDSEV+DE + + LP+ + GRGN KS+K
Sbjct: 1 MPKKGGRRRKTRTH-----VAERAAPEDDNT---PMSFVFKMGKVPSVVSELVQDMRRVMAPYTADRLREKRKNTLKDFVSIGAPLGVTHFMFFTSTEASTNMKIARIPRGPTLSFKVVGYSLMRQVHLIHKRPVDASAAFHSSPLVVLNNFTGTE--DHIKLMNVTFQNMFPAIDVQTVQLSECRRVVLFNYEKETDTVEFRQYVIRATPLGLSKSVKTIVRAKIPNLNMLEDISEYVLGNSSRVDNGGVTSDSEVDDETTHVTLPDTFRGRGNQKSEK 270
BLAST of mRNA_H-elongata_contig66083.14199.1 vs. uniprot
Match: A0A067CMJ3_SAPPC (Brix domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CMJ3_SAPPC) HSP 1 Score: 270 bits (690), Expect = 9.900e-85 Identity = 141/276 (51.09%), Postives = 192/276 (69.57%), Query Frame = 1
Query: 1 MPSKGGRRKKTRTHMVGPPVGAFGAPETELTEKAPKTFVLRKGRVHANVSDLVEEMRRVMEPNTARKLRERTKNSVKDYVSVSSVLGVTHLLVFSQTDKSLSFRVCRTPSGPTLTFKVHQFSLMKHIRALQKRPQQVNHVYKTAPLVVLNNFGDKEASSQVKLMKVTLQNMFPSINVATVKLQDCRRVVMFNLDKTSGHVELRHYAVRATPTGITKAIKKVVQAKVPDLHALDDISEYVAGGMGGG-ASDSEVEDEESKIMLPEDYVGRGNVKSQK 825
MP K GRRKKTRTH TE E PK+FV + G+ V +LV++MR+VM P TA KLRE+ KN+++D+V V++ LGV+H L FS TD + ++ R P GPTL+FKV +SLMKHI ++QKRP + +KT+PLVVLNNF E VKL+ VT QNMFP+I+V T+ L DCRRVV+F+ DK +GHVE R Y +RA P G++K++K +V++KVP+L ++DIS++V G G SDSEV+DE + I+LP+ + GRGN KS+K
Sbjct: 1 MPRKAGRRKKTRTHANA---------GTEDYENTPKSFVFKMGKAPGCVINLVQDMRQVMLPYTADKLREKRKNTIQDFVHVAAPLGVSHFLAFSHTDAGTNMKLVRLPRGPTLSFKVVGYSLMKHIHSIQKRPVDASLAFKTSPLVVLNNFTGAE--DHVKLLNVTFQNMFPAIDVQTIALADCRRVVLFHYDKETGHVEFRQYVIRAAPLGLSKSVKTLVKSKVPNLGNVEDISDFVFGNAQTGMTSDSEVDDESAHIVLPDKFRGRGNTKSEK 265 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig66083.14199.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig66083.14199.1 >prot_H-elongata_contig66083.14199.1 ID=prot_H-elongata_contig66083.14199.1|Name=mRNA_H-elongata_contig66083.14199.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=277bp MPSKGGRRKKTRTHMVGPPVGAFGAPETELTEKAPKTFVLRKGRVHANVSback to top mRNA from alignment at H-elongata_contig66083:739..2055+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig66083.14199.1 ID=mRNA_H-elongata_contig66083.14199.1|Name=mRNA_H-elongata_contig66083.14199.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1317bp|location=Sequence derived from alignment at H-elongata_contig66083:739..2055+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig66083:739..2055+ >mRNA_H-elongata_contig66083.14199.1 ID=mRNA_H-elongata_contig66083.14199.1|Name=mRNA_H-elongata_contig66083.14199.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1662bp|location=Sequence derived from alignment at H-elongata_contig66083:739..2055+ (Himanthalia elongata Himel1 dioecious)back to top |