mRNA_H-elongata_contig66022.14192.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig66022.14192.1 vs. uniprot
Match: A0A6H5KYD4_9PHAE (NEDD8-activating enzyme E1 regulatory subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYD4_9PHAE) HSP 1 Score: 216 bits (549), Expect = 1.560e-65 Identity = 95/119 (79.83%), Postives = 107/119 (89.92%), Query Frame = 1
Query: 4 DPGFFSKFSLVIASQLHESSFRRMAGLCWEQSIPFLIVRSYGLLGHVRLVLRGHCVVESKPEGNKPDLRISQPWPELLEYCQSIDLDKQDGMLHAHTPWLVIVVRKMKEWKDAHGGAMP 360
DP FFSKFSLVIASQLHE++ R+MA LCW++S+PFL VRSYG LGHVRL LRGHCVVESKPEGNKPDLRI+QPWPELLEYCQSID DKQD +LH HTPW+VI+VRKM EWK AH G++P
Sbjct: 110 DPAFFSKFSLVIASQLHETTLRKMAALCWDKSVPFLHVRSYGFLGHVRLALRGHCVVESKPEGNKPDLRIAQPWPELLEYCQSIDFDKQDNVLHGHTPWIVILVRKMDEWKAAHRGSLP 228
BLAST of mRNA_H-elongata_contig66022.14192.1 vs. uniprot
Match: A0A453M9D9_AEGTS (ThiF domain-containing protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453M9D9_AEGTS) HSP 1 Score: 130 bits (328), Expect = 2.010e-35 Identity = 57/123 (46.34%), Postives = 87/123 (70.73%), Query Frame = 1
Query: 4 DPGFFSKFSLVIASQLHESSFRRMAGLCWEQSIPFLIVRSYGLLGHVRLVLRGHCVVESKPEGNKPDLRISQPWPELLEYCQSIDLDKQDGMLHAHTPWLVIVVRKMKEWKDAHGGAMPDMKQ 372
+P FFS+F++VIA+QL ESS ++ G+C +I + RSYGL G VR+ ++ HCV+ESKP+ DLR+ PW EL ++ +SID+ +D ++H HTP++VI+VR ++W DAH G +P +Q
Sbjct: 107 NPSFFSEFTVVIATQLPESSLLKLDGICGSANIVLVAARSYGLTGLVRVSIKEHCVIESKPDHFLDDLRLHNPWTELKQFAKSIDICDKDAVVHKHTPYIVILVRLAEKWADAHDGQLPSTRQ 229
BLAST of mRNA_H-elongata_contig66022.14192.1 vs. uniprot
Match: A0A453M9Q6_AEGTS (ThiF domain-containing protein n=4 Tax=Triticinae TaxID=1648030 RepID=A0A453M9Q6_AEGTS) HSP 1 Score: 130 bits (328), Expect = 5.320e-35 Identity = 57/123 (46.34%), Postives = 87/123 (70.73%), Query Frame = 1
Query: 4 DPGFFSKFSLVIASQLHESSFRRMAGLCWEQSIPFLIVRSYGLLGHVRLVLRGHCVVESKPEGNKPDLRISQPWPELLEYCQSIDLDKQDGMLHAHTPWLVIVVRKMKEWKDAHGGAMPDMKQ 372
+P FFS+F++VIA+QL ESS ++ G+C +I + RSYGL G VR+ ++ HCV+ESKP+ DLR+ PW EL ++ +SID+ +D ++H HTP++VI+VR ++W DAH G +P +Q
Sbjct: 109 NPSFFSEFTVVIATQLPESSLLKLDGICGSANIVLVAARSYGLTGLVRVSIKEHCVIESKPDHFLDDLRLHNPWTELKQFAKSIDICDKDAVVHKHTPYIVILVRLAEKWADAHDGQLPSTRQ 231
BLAST of mRNA_H-elongata_contig66022.14192.1 vs. uniprot
Match: A0A453LEH5_AEGTS (Uncharacterized protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453LEH5_AEGTS) HSP 1 Score: 131 bits (329), Expect = 1.020e-34 Identity = 56/123 (45.53%), Postives = 88/123 (71.54%), Query Frame = 1
Query: 4 DPGFFSKFSLVIASQLHESSFRRMAGLCWEQSIPFLIVRSYGLLGHVRLVLRGHCVVESKPEGNKPDLRISQPWPELLEYCQSIDLDKQDGMLHAHTPWLVIVVRKMKEWKDAHGGAMPDMKQ 372
+P FFS+F++V+A+QL ESS ++ +C +I + RSYGL G VR+ ++ HCV+ESKP+ + DLR+ PWPEL ++ +SID+ +D ++H HTP++VI+VR ++W DAH G +P +Q
Sbjct: 5 NPSFFSQFTVVLATQLPESSLLKLDSICRSANIVLVAARSYGLTGLVRVSIKEHCVIESKPDHSLDDLRLHNPWPELKQFAKSIDICDKDPVVHKHTPYIVILVRLAEKWADAHDGQLPSTRQ 127
BLAST of mRNA_H-elongata_contig66022.14192.1 vs. uniprot
Match: A0A453M9J7_AEGTS (ThiF domain-containing protein n=4 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453M9J7_AEGTS) HSP 1 Score: 130 bits (328), Expect = 1.110e-34 Identity = 57/123 (46.34%), Postives = 87/123 (70.73%), Query Frame = 1
Query: 4 DPGFFSKFSLVIASQLHESSFRRMAGLCWEQSIPFLIVRSYGLLGHVRLVLRGHCVVESKPEGNKPDLRISQPWPELLEYCQSIDLDKQDGMLHAHTPWLVIVVRKMKEWKDAHGGAMPDMKQ 372
+P FFS+F++VIA+QL ESS ++ G+C +I + RSYGL G VR+ ++ HCV+ESKP+ DLR+ PW EL ++ +SID+ +D ++H HTP++VI+VR ++W DAH G +P +Q
Sbjct: 107 NPSFFSEFTVVIATQLPESSLLKLDGICGSANIVLVAARSYGLTGLVRVSIKEHCVIESKPDHFLDDLRLHNPWTELKQFAKSIDICDKDAVVHKHTPYIVILVRLAEKWADAHDGQLPSTRQ 229
BLAST of mRNA_H-elongata_contig66022.14192.1 vs. uniprot
Match: A0A453LEA3_AEGTS (ThiF domain-containing protein n=4 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453LEA3_AEGTS) HSP 1 Score: 131 bits (329), Expect = 1.130e-34 Identity = 56/123 (45.53%), Postives = 88/123 (71.54%), Query Frame = 1
Query: 4 DPGFFSKFSLVIASQLHESSFRRMAGLCWEQSIPFLIVRSYGLLGHVRLVLRGHCVVESKPEGNKPDLRISQPWPELLEYCQSIDLDKQDGMLHAHTPWLVIVVRKMKEWKDAHGGAMPDMKQ 372
+P FFS+F++V+A+QL ESS ++ +C +I + RSYGL G VR+ ++ HCV+ESKP+ + DLR+ PWPEL ++ +SID+ +D ++H HTP++VI+VR ++W DAH G +P +Q
Sbjct: 171 NPSFFSQFTVVLATQLPESSLLKLDSICRSANIVLVAARSYGLTGLVRVSIKEHCVIESKPDHSLDDLRLHNPWPELKQFAKSIDICDKDPVVHKHTPYIVILVRLAEKWADAHDGQLPSTRQ 293
BLAST of mRNA_H-elongata_contig66022.14192.1 vs. uniprot
Match: A0A3L6ELG6_MAIZE (NEDD8-activating enzyme E1 regulatory subunit AXL n=1 Tax=Zea mays TaxID=4577 RepID=A0A3L6ELG6_MAIZE) HSP 1 Score: 128 bits (322), Expect = 5.370e-34 Identity = 56/123 (45.53%), Postives = 87/123 (70.73%), Query Frame = 1
Query: 4 DPGFFSKFSLVIASQLHESSFRRMAGLCWEQSIPFLIVRSYGLLGHVRLVLRGHCVVESKPEGNKPDLRISQPWPELLEYCQSIDLDKQDGMLHAHTPWLVIVVRKMKEWKDAHGGAMPDMKQ 372
+P FFS+F++VIA+QL ESS ++ +C + I + RSYGL G VR+ ++ HCV+ESKP+ DLR+ PW EL ++ +SID++ +D ++H HTP++V++VR ++W DAH G MP +Q
Sbjct: 118 NPSFFSQFTVVIATQLPESSLLKLDDICRKADIVLVAARSYGLTGLVRVSVKEHCVIESKPDHFLDDLRLHNPWTELKQFAKSIDINDKDPVVHKHTPYIVVLVRLAEKWADAHDGNMPSTRQ 240
BLAST of mRNA_H-elongata_contig66022.14192.1 vs. uniprot
Match: ULA1_XENLA (NEDD8-activating enzyme E1 regulatory subunit n=8 Tax=Xenopus TaxID=8353 RepID=ULA1_XENLA) HSP 1 Score: 132 bits (332), Expect = 7.740e-34 Identity = 53/119 (44.54%), Postives = 85/119 (71.43%), Query Frame = 1
Query: 4 DPGFFSKFSLVIASQLHESSFRRMAGLCWEQSIPFLIVRSYGLLGHVRLVLRGHCVVESKPEGNKPDLRISQPWPELLEYCQSIDLDKQDGMLHAHTPWLVIVVRKMKEWKDAHGGAMP 360
DP FF KF++VI++QL ES+ R+A W+ +IP L+ R+YG +G++R++++ H V+ES P+ DLR+ QP+PEL E+ QS DLD + H+HTPW+++V + + +W+ +GG MP
Sbjct: 115 DPSFFCKFTMVISTQLPESTLLRLAETLWDSNIPLLVCRAYGFVGYMRIIVKEHTVIESHPDNALEDLRLDQPFPELREHLQSYDLDHMERKDHSHTPWIIVVAKYLDKWRSENGGQMP 233
BLAST of mRNA_H-elongata_contig66022.14192.1 vs. uniprot
Match: A0A2G5EQ43_AQUCA (ThiF domain-containing protein n=1 Tax=Aquilegia coerulea TaxID=218851 RepID=A0A2G5EQ43_AQUCA) HSP 1 Score: 129 bits (325), Expect = 1.960e-33 Identity = 56/123 (45.53%), Postives = 89/123 (72.36%), Query Frame = 1
Query: 4 DPGFFSKFSLVIASQLHESSFRRMAGLCWEQSIPFLIVRSYGLLGHVRLVLRGHCVVESKPEGNKPDLRISQPWPELLEYCQSIDLDKQDGMLHAHTPWLVIVVRKMKEWKDAHGGAMPDMKQ 372
+P FFS+F+LVIA+QL E+S ++ +C E ++ + RSYGL G VR+ L+ H V+ESKP+ DLR++ PWPEL + +SIDL+ D ++H HTP++VI+V+ +EW ++HGG++P ++
Sbjct: 111 NPSFFSQFTLVIATQLVEASVVKLDKICREANVMLISARSYGLTGLVRISLKEHAVIESKPDHFLDDLRLNNPWPELKSFAESIDLNSTDPVVHKHTPYVVILVKMAEEWANSHGGSLPSSRE 233
BLAST of mRNA_H-elongata_contig66022.14192.1 vs. uniprot
Match: A0A7L3MUD3_9AVES (NEDD8-activating enzyme E1 regulatory subunit (Fragment) n=2 Tax=Neognathae TaxID=8825 RepID=A0A7L3MUD3_9AVES) HSP 1 Score: 130 bits (328), Expect = 1.960e-33 Identity = 56/119 (47.06%), Postives = 84/119 (70.59%), Query Frame = 1
Query: 4 DPGFFSKFSLVIASQLHESSFRRMAGLCWEQSIPFLIVRSYGLLGHVRLVLRGHCVVESKPEGNKPDLRISQPWPELLEYCQSIDLDKQDGMLHAHTPWLVIVVRKMKEWKDAHGGAMP 360
DP FFS+F+LV+A+QL ES+ R+A L W +IP L+ R+YGL+G++R++++ H VVES P+ DLR+ +P+PEL E+ QS DLD D H+HTPW+VIV + + +W + +P
Sbjct: 99 DPSFFSRFNLVVATQLPESTLLRLAELLWNSNIPLLVCRTYGLVGYMRVIIKEHTVVESHPDNTLEDLRLDKPFPELREHIQSYDLDHMDKKDHSHTPWIVIVAKYLTKWFNEKSDQLP 217 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig66022.14192.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig66022.14192.1 >prot_H-elongata_contig66022.14192.1 ID=prot_H-elongata_contig66022.14192.1|Name=mRNA_H-elongata_contig66022.14192.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=124bp ADPGFFSKFSLVIASQLHESSFRRMAGLCWEQSIPFLIVRSYGLLGHVRLback to top mRNA from alignment at H-elongata_contig66022:1889..3088- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig66022.14192.1 ID=mRNA_H-elongata_contig66022.14192.1|Name=mRNA_H-elongata_contig66022.14192.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1200bp|location=Sequence derived from alignment at H-elongata_contig66022:1889..3088- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig66022:1889..3088- >mRNA_H-elongata_contig66022.14192.1 ID=mRNA_H-elongata_contig66022.14192.1|Name=mRNA_H-elongata_contig66022.14192.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=744bp|location=Sequence derived from alignment at H-elongata_contig66022:1889..3088- (Himanthalia elongata Himel1 dioecious)back to top |