mRNA_H-elongata_contig6601.14190.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig6601.14190.1
Unique NamemRNA_H-elongata_contig6601.14190.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
[Close]
BLAST of mRNA_H-elongata_contig6601.14190.1 vs. uniprot
Match: D7G0B9_ECTSI (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0B9_ECTSI)

HSP 1 Score: 295 bits (754), Expect = 3.180e-96
Identity = 146/170 (85.88%), Postives = 159/170 (93.53%), Query Frame = 1 
Query:    1 QVLLMERMYIRREMYLSIMMDRASQGPVIVACPDGGTSIEDLAESNPELILKETVDVMEGLTDFQAAKIAKHLKL--EGPSFDAGKTLLKNMYGMFAEKDCTLVEINPLAETADGRVMACDAKLNFDDNAEWRQKETFAFRDFTQEDSREVEAAKYDLNYIGLTGNIGCM 504
            +VLLMERMY+RREMYLSIMMDR SQGPVIVACPDGGTSIEDLAESNPELI+KE VD+M GLTD QA KIA+HLKL  +GPS++AGKTLLKNMY MF E+DCTLVEINPLAET +GRVMACDAKLNFDDNAEWRQK+TF FRD+TQED+REVEAAKYDLNYIGLTGNIGCM
Sbjct:  151 KVLLMERMYMRREMYLSIMMDRGSQGPVIVACPDGGTSIEDLAESNPELIMKEEVDIMTGLTDAQAGKIAEHLKLSSDGPSYEAGKTLLKNMYAMFIERDCTLVEINPLAETPEGRVMACDAKLNFDDNAEWRQKDTFQFRDYTQEDTREVEAAKYDLNYIGLTGNIGCM 320
[Close]
BLAST of mRNA_H-elongata_contig6601.14190.1 vs. uniprot
Match: A0A835YQF4_9STRA (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQF4_9STRA)

HSP 1 Score: 243 bits (621), Expect = 2.720e-76
Identity = 122/170 (71.76%), Postives = 145/170 (85.29%), Query Frame = 1 
Query:    1 QVLLMERMYIRREMYLSIMMDRASQGPVIVACPDGGTSIEDLAESNPELILKETVDVMEGLTDFQAAKIAKHLKLEG--PSFDAGKTLLKNMYGMFAEKDCTLVEINPLAETADGRVMACDAKLNFDDNAEWRQKETFAFRDFTQEDSREVEAAKYDLNYIGLTGNIGCM 504
            +VLLMER+Y+RREMYLSIMMDR  +GPV+VAC  GGTSIEDLAE +PEL++K  V + +GLT+ QA KIAKHL+L    P++D G T+LKN+Y MF +KDCTLVE+NPLAET DGRV+ACDAKLNFDDNA +RQK+ F  RD++QED REVEAAKYDLNYIGLTGNIGCM
Sbjct:  145 KVLLMERVYMRREMYLSIMMDRTYKGPVVVACASGGTSIEDLAEHSPELVMKMPVSITKGLTEEQADKIAKHLELVPGTPAYDNGITMLKNLYEMFIKKDCTLVEVNPLAETPDGRVLACDAKLNFDDNAAFRQKDIFTERDYSQEDPREVEAAKYDLNYIGLTGNIGCM 314
[Close]
BLAST of mRNA_H-elongata_contig6601.14190.1 vs. uniprot
Match: A0A7S3XRL5_HETAK (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XRL5_HETAK)

HSP 1 Score: 223 bits (567), Expect = 9.300e-69
Identity = 115/170 (67.65%), Postives = 138/170 (81.18%), Query Frame = 1 
Query:    1 QVLLMERMYIRREMYLSIMMDRASQGPVIVACPDGGTSIEDLAESNPELILKETVDVMEGLTDFQAAKIAKHLKL-EG-PSFDAGKTLLKNMYGMFAEKDCTLVEINPLAETADGRVMACDAKLNFDDNAEWRQKETFAFRDFTQEDSREVEAAKYDLNYIGLTGNIGCM 504
            +V LMER+Y+RREMYLS+M+DR +QGP++VA P GGTSIED+AE  PELI  + +D+MEGLTD QA+K+A +L + EG PS      L+KN+Y MF E D T VEINPLAET+ G VM  DAKLNFDDNAE+RQKE  A+RDFTQED REVEAAK+DLNYIGL+GNIGCM
Sbjct:   95 KVFLMERVYMRREMYLSLMLDRGTQGPLMVASPCGGTSIEDVAEQTPELIFTQPIDIMEGLTDAQASKMATNLGMVEGSPSHSDAIALMKNLYTMFIETDATQVEINPLAETSTGEVMCADAKLNFDDNAEFRQKEVHAYRDFTQEDPREVEAAKFDLNYIGLSGNIGCM 264
[Close]
BLAST of mRNA_H-elongata_contig6601.14190.1 vs. uniprot
Match: A0A485KYE4_9STRA (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A485KYE4_9STRA)

HSP 1 Score: 221 bits (562), Expect = 1.210e-67
Identity = 112/168 (66.67%), Postives = 133/168 (79.17%), Query Frame = 1 
Query:    1 QVLLMERMYIRREMYLSIMMDRASQGPVIVACPDGGTSIEDLAESNPELILKETVDVMEGLTDFQAAKIAKHLKLEGPSFDAGKTLLKNMYGMFAEKDCTLVEINPLAETADGRVMACDAKLNFDDNAEWRQKETFAFRDFTQEDSREVEAAKYDLNYIGLTGNIGCM 504
            +V LMER+Y+RREMY SI+MDRASQGPV+VA P GGTSIED+A + PELI KE +D+M G TD Q  ++A ++ LEG S   G  LL N+Y MF   D TLVEINPLAET DG+V ACDAK+NFDDNA +RQK+ FA RD TQED+REVEA+ YDLNYIGL GNIGC+
Sbjct:  128 KVFLMERVYMRREMYFSILMDRASQGPVMVASPAGGTSIEDVAHATPELIFKENIDIMTGPTDEQLKRLASNMGLEGVSLTRGVELLGNLYKMFIGVDATLVEINPLAETPDGKVFACDAKINFDDNAAFRQKDIFAKRDKTQEDAREVEASAYDLNYIGLDGNIGCL 295
[Close]
BLAST of mRNA_H-elongata_contig6601.14190.1 vs. uniprot
Match: A0A6T6HZE5_9STRA (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A6T6HZE5_9STRA)

HSP 1 Score: 219 bits (558), Expect = 6.180e-67
Identity = 109/170 (64.12%), Postives = 135/170 (79.41%), Query Frame = 1 
Query:    1 QVLLMERMYIRREMYLSIMMDRASQGPVIVACPDGGTSIEDLAESNPELILKETVDVMEGLTDFQAAKIAKHLKLEG--PSFDAGKTLLKNMYGMFAEKDCTLVEINPLAETADGRVMACDAKLNFDDNAEWRQKETFAFRDFTQEDSREVEAAKYDLNYIGLTGNIGCM 504
            +V LMERMY+RREMYLSI+MDRASQGP++V  P GGT+IED+A+SNPE+I  E +D++EG+   Q  ++A +L LE   PS +   TL+KN+Y MF + DCT VE+NPLAET +G V+ CDAK+NFD NAE+RQ   F  RDFTQEDSREVEA+KYDLNYIGL GNIGCM
Sbjct:  135 KVFLMERMYMRREMYLSILMDRASQGPLLVGSPRGGTAIEDIAKSNPEVIFTEPIDIVEGIQQDQCERMATNLGLEAGSPSHENAITLMKNLYSMFTQCDCTQVEVNPLAETPEGDVVVCDAKVNFDSNAEYRQSSIFDKRDFTQEDSREVEASKYDLNYIGLDGNIGCM 304
[Close]
BLAST of mRNA_H-elongata_contig6601.14190.1 vs. uniprot
Match: H3GTW5_PHYRM (ATP-grasp domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GTW5_PHYRM)

HSP 1 Score: 213 bits (541), Expect = 5.680e-66
Identity = 109/168 (64.88%), Postives = 131/168 (77.98%), Query Frame = 1 
Query:    1 QVLLMERMYIRREMYLSIMMDRASQGPVIVACPDGGTSIEDLAESNPELILKETVDVMEGLTDFQAAKIAKHLKLEGPSFDAGKTLLKNMYGMFAEKDCTLVEINPLAETADGRVMACDAKLNFDDNAEWRQKETFAFRDFTQEDSREVEAAKYDLNYIGLTGNIGCM 504
            +V LMER+++RREMY SI+MDRASQGPV+VA P GGTSIED+AE+ PELI KE+VD+  G TD Q +++AK L  EG      +T +KN+Y MF   D TLVEINPLAET +G + ACDAKLN+DDNA +R KE FA RD TQED REVEA+ YDLNYIGL GNIGC+
Sbjct:  130 KVFLMERVWMRREMYFSILMDRASQGPVMVASPAGGTSIEDVAEATPELIFKESVDISTGPTDEQVSRLAKALGGEGAVLKKLETQIKNLYNMFIGVDATLVEINPLAETREGEIFACDAKLNYDDNAAFRHKEIFAKRDKTQEDPREVEASSYDLNYIGLDGNIGCL 297
[Close]
BLAST of mRNA_H-elongata_contig6601.14190.1 vs. uniprot
Match: W7TUJ9_9STRA (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TUJ9_9STRA)

HSP 1 Score: 216 bits (550), Expect = 9.250e-66
Identity = 114/170 (67.06%), Postives = 135/170 (79.41%), Query Frame = 1 
Query:    1 QVLLMERMYIRREMYLSIMMDRASQGPVIVACPDGGTSIEDLAESNPELILKETVDVMEGLTDFQAAKIAKHLKLEG--PSFDAGKTLLKNMYGMFAEKDCTLVEINPLAETADGRVMACDAKLNFDDNAEWRQKETFAFRDFTQEDSREVEAAKYDLNYIGLTGNIGCM 504
            +VLL+ER+Y+RREMYLSIMMDR +QGP+IVA P GGTSIED+A SNPE I  E +D+MEGL++  AA IA  + LE    +  AG  L+K +Y M    D TLVEINPLAET DGR++A DAKLNFDDNAE+RQK+ FA RD+TQED REVEA KYDLNYIGL+GNIGCM
Sbjct:  130 KVLLVERLYMRREMYLSIMMDRTTQGPMIVASPVGGTSIEDVAASNPEKIFTEPIDIMEGLSEEAAAGIATKIGLEPGTATHAAGADLVKRLYKMMIATDATLVEINPLAETNDGRIVAADAKLNFDDNAEYRQKQIFAKRDYTQEDPREVEAHKYDLNYIGLSGNIGCM 299
[Close]
BLAST of mRNA_H-elongata_contig6601.14190.1 vs. uniprot
Match: A0A024T9H2_9STRA (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024T9H2_9STRA)

HSP 1 Score: 216 bits (549), Expect = 1.040e-65
Identity = 109/168 (64.88%), Postives = 132/168 (78.57%), Query Frame = 1 
Query:    1 QVLLMERMYIRREMYLSIMMDRASQGPVIVACPDGGTSIEDLAESNPELILKETVDVMEGLTDFQAAKIAKHLKLEGPSFDAGKTLLKNMYGMFAEKDCTLVEINPLAETADGRVMACDAKLNFDDNAEWRQKETFAFRDFTQEDSREVEAAKYDLNYIGLTGNIGCM 504
            +V LMER+Y+RREMY SI+MDRASQGPV+V  P GGTSIED+A + PELI KE VD+M G T+ Q  ++AK++ L+GP+   G  LL N+Y MF   D T VEINPLAET +G+V ACDAK+NFDDNA +RQ E FA RD TQED+REVEA+ YDLNYIGL GNIGC+
Sbjct:  127 KVFLMERVYLRREMYFSILMDRASQGPVLVGSPAGGTSIEDVAHNTPELIFKEHVDIMTGPTNEQLTRLAKNMGLDGPALPRGVELLGNLYKMFIGVDATQVEINPLAETPEGQVFACDAKINFDDNAAFRQAEIFAQRDKTQEDAREVEASAYDLNYIGLDGNIGCL 294
[Close]
BLAST of mRNA_H-elongata_contig6601.14190.1 vs. uniprot
Match: A0A0W8DSX0_PHYNI (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=3 Tax=Peronosporaceae TaxID=4777 RepID=A0A0W8DSX0_PHYNI)

HSP 1 Score: 213 bits (543), Expect = 3.640e-65
Identity = 110/168 (65.48%), Postives = 131/168 (77.98%), Query Frame = 1 
Query:    1 QVLLMERMYIRREMYLSIMMDRASQGPVIVACPDGGTSIEDLAESNPELILKETVDVMEGLTDFQAAKIAKHLKLEGPSFDAGKTLLKNMYGMFAEKDCTLVEINPLAETADGRVMACDAKLNFDDNAEWRQKETFAFRDFTQEDSREVEAAKYDLNYIGLTGNIGCM 504
            +V LMER+++RREMY SI+MDRASQGPV+VA P GGTSIED+AE+ PELI KE+VD+  G TD Q A++AK L  EG      +T +KN+Y MF   D TLVEINPLAET +G + ACDAKLN+DDNA +R KE FA RD TQED REVEA+ YDLNYIGL GNIGC+
Sbjct:   97 KVFLMERVWMRREMYFSILMDRASQGPVMVASPAGGTSIEDVAEATPELIFKESVDISTGPTDEQVARLAKALGGEGEVLKKLETQIKNLYNMFIGVDATLVEINPLAETREGEIFACDAKLNYDDNAAFRHKEIFAKRDKTQEDPREVEASAYDLNYIGLDGNIGCL 264
[Close]
BLAST of mRNA_H-elongata_contig6601.14190.1 vs. uniprot
Match: A0A7S2WAK9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WAK9_9STRA)

HSP 1 Score: 210 bits (534), Expect = 8.420e-65
Identity = 107/170 (62.94%), Postives = 130/170 (76.47%), Query Frame = 1 
Query:    1 QVLLMERMYIRREMYLSIMMDRASQGPVIVACPDGGTSIEDLAESNPELILKETVDVMEGLTDFQAAKIAKHLKLEGPSFDAGKT--LLKNMYGMFAEKDCTLVEINPLAETADGRVMACDAKLNFDDNAEWRQKETFAFRDFTQEDSREVEAAKYDLNYIGLTGNIGCM 504
            +VLLMER+Y + E YLSI+MDR S GP++V  P GGTSIED+A SNPE I  E +D+MEGLT+   A++A ++ L   S   GK   L+ N+Y MF  KDCT +E+NPL+ET  G V+ CDAK+NFDDNAEWRQK+ FA RD TQEDSREVEA+KYDLNYIGL GNIGCM
Sbjct:  131 KVLLMERIYPKSEKYLSILMDRDSGGPLMVGSPKGGTSIEDVAASNPEFIFTEPIDIMEGLTEEACARMANNIGLPTGSVAHGKAMVLMNNLYAMFLAKDCTQLEVNPLSETEAGDVVVCDAKVNFDDNAEWRQKDIFARRDTTQEDSREVEASKYDLNYIGLDGNIGCM 300
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6601.14190.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0B9_ECTSI3.180e-9685.88Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
A0A835YQF4_9STRA2.720e-7671.76Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
A0A7S3XRL5_HETAK9.300e-6967.65Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
A0A485KYE4_9STRA1.210e-6766.67Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
A0A6T6HZE5_9STRA6.180e-6764.12Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
H3GTW5_PHYRM5.680e-6664.88ATP-grasp domain-containing protein n=1 Tax=Phytop... [more]
W7TUJ9_9STRA9.250e-6667.06Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
A0A024T9H2_9STRA1.040e-6564.88Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
A0A0W8DSX0_PHYNI3.640e-6565.48Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
A0A7S2WAK9_9STRA8.420e-6562.94Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig6601contigH-elongata_contig6601:43..9661 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score290.8
Seed ortholog evalue4e-76
Seed eggNOG ortholog2880.D7G0B9
KEGG rclassRC00004,RC00014
KEGG koko:K01900
KEGG ReactionR00432,R00727
KEGG Pathwayko00020,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map01100,map01110,map01120,map01130,map01200
KEGG ModuleM00009,M00011
EggNOG free text desc.succinate-CoA ligase (ADP-forming) activity
EggNOG OGsCOG0045@1,KOG2799@2759
EC6.2.1.4,6.2.1.5
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04147
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionSuccinate:CoA ligase (ADP-forming)
Ec32 orthologEc-02_001020.1
Exons6
Model size504
Cds size492
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931048.6176906-CDS-H-elongata_contig6601:42..1021622931048.6176906-CDS-H-elongata_contig6601:42..102Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6601 43..102 -
1691679676.909791-CDS-H-elongata_contig6601:42..1021691679676.909791-CDS-H-elongata_contig6601:42..102Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6601 43..102 -
1622931048.6343951-CDS-H-elongata_contig6601:868..9691622931048.6343951-CDS-H-elongata_contig6601:868..969Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6601 869..969 -
1691679676.930775-CDS-H-elongata_contig6601:868..9691691679676.930775-CDS-H-elongata_contig6601:868..969Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6601 869..969 -
1622931048.6496482-CDS-H-elongata_contig6601:2685..27821622931048.6496482-CDS-H-elongata_contig6601:2685..2782Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6601 2686..2782 -
1691679676.9418626-CDS-H-elongata_contig6601:2685..27821691679676.9418626-CDS-H-elongata_contig6601:2685..2782Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6601 2686..2782 -
1622931048.666909-CDS-H-elongata_contig6601:7293..73831622931048.666909-CDS-H-elongata_contig6601:7293..7383Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6601 7294..7383 -
1691679676.9510999-CDS-H-elongata_contig6601:7293..73831691679676.9510999-CDS-H-elongata_contig6601:7293..7383Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6601 7294..7383 -
1622931048.6837506-CDS-H-elongata_contig6601:8964..90451622931048.6837506-CDS-H-elongata_contig6601:8964..9045Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6601 8965..9045 -
1691679676.9613762-CDS-H-elongata_contig6601:8964..90451691679676.9613762-CDS-H-elongata_contig6601:8964..9045Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6601 8965..9045 -
1622931048.7015793-CDS-H-elongata_contig6601:9586..96491622931048.7015793-CDS-H-elongata_contig6601:9586..9649Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6601 9587..9649 -
1691679676.9728222-CDS-H-elongata_contig6601:9586..96491691679676.9728222-CDS-H-elongata_contig6601:9586..9649Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6601 9587..9649 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931048.7345157-UTR-H-elongata_contig6601:9649..96611622931048.7345157-UTR-H-elongata_contig6601:9649..9661Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6601 9650..9661 -
1691679676.9841766-UTR-H-elongata_contig6601:9649..96611691679676.9841766-UTR-H-elongata_contig6601:9649..9661Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6601 9650..9661 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig6601.14190.1prot_H-elongata_contig6601.14190.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig6601 43..9649 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig6601.14190.1

>prot_H-elongata_contig6601.14190.1 ID=prot_H-elongata_contig6601.14190.1|Name=mRNA_H-elongata_contig6601.14190.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=164bp
MERMYIRREMYLSIMMDRASQGPVIVACPDGGTSIEDLAESNPELILKET
VDVMEGLTDFQAAKIAKHLKLEGPSFDAGKTLLKNMYGMFAEKDCTLVEI
NPLAETADGRVMACDAKLNFDDNAEWRQKETFAFRDFTQEDSREVEAAKY
DLNYIGLTGNIGCM
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mRNA from alignment at H-elongata_contig6601:43..9661-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig6601.14190.1 ID=mRNA_H-elongata_contig6601.14190.1|Name=mRNA_H-elongata_contig6601.14190.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=9619bp|location=Sequence derived from alignment at H-elongata_contig6601:43..9661- (Himanthalia elongata Himel1 dioecious)
CAGGTGCTTTTGATGGAACGGATGTACATTCGCCGGGAGATGTATCTGTC
CATAATGATGGACCGCGCATCGCAGGTACGAGAGCCGTCACACAAAGGCG
TCATTAAAAAACAACAATAGAGGTTGGTGATGTCCTTGATAAAAGTGGGC
AGTATATTTTTATGACGCTACAAGCTAGCGTCATCGTGCTCTGCTCACAT
TGTAATTTTTGGTGGCGTTGCGAGGTTGCAATCTCCAAACTATCGCTTTA
ACTTCTGCTTCAATCGTATATGTTTGTTTTTCTGTTTAGTGCTCTGTCCC
CCCCCCCCCCCCCCACCCCCCACACACTGCATCTCTCTGCTCGTTATTAT
ATTTCTCTTTTTACTANNNNNNNNNNACTATCCTTTTTACTTCTTTTTTA
ATCTTTTATTTTTTTTTTTTTTTTTTTGTCTCTTTCCCCCCCCCCCCCCC
CCGAAATACCAACCAGTAACTTTCGCGATGATTCATGATTCATTATGGTT
GAGAAAGAGAGAGAGATATACCATGTTTATCCCCCCGTCTCTTCTACCCA
TGATTTGTCCTTCCCCGTCTTCATTTGATGTCTTCCCATTCGATGAACAA
CACGATCGTTATACAGGGACCCGTAATCGTGGCTTGCCCTGACGGAGGCA
CCTCCATCGAAGACCTCGCCGAGTCGAACCCGGAGCTCATCCTAAAGGTA
CAATAATATGTAATATTAAGTGTCCTTCATTAATACAGCATATAAGGTCC
AGCACAGTGCATTACCGTGTCGGGATGTGATGGGATTGGATGGCCTCTGC
TGTGCTGCACAGCCATAATTTATTCATGGTTTCTCAGCTTTTGGGGAGCA
TTTTTATTTTATTTTTTTATTTATGCTTTCAGTTGTGTCTTCATTTTTTT
CCTGGCCATTGAATATTAAACAAACACCTCTCAGGGTGTGCTAATAAGGT
GTGGATTTTCGAAGGGTTAGAATGAGTTCATGTTTTTTTTAAAGAAAAAA
GGCTAATCAAGATAAGCTAGTGGTTGGAAATATAATAATGGAAGGGCCGC
CTATCGACATAATGCGAAACACAAACCACCACCGACCTGGAGCTTTAGCA
TCCGATCCCACCCCATCCGCCTTGGGATTCGGTTTCATCCCATTACATCC
CGTCACATCCATTTCCCCCCGTCATTGTACGTGCTCCGTTATTTTACGTG
CAGGTCAGTGGTTTTATGTTTCAATTGAGTATGTTTTTGTTTGTATTATC
GTTCATTTCTTCCCTCGTGTTTTTATCAGCACCAGCGAATCACAAACGGG
GTGGGGAATAGGCCCCAATTGGCATATCATAGAGTGAAAACAAAAAAAAC
TTTCGTTGGAGCTTTGTATAGGATTGATTGTTCATCGGAAAAACAAAACA
AAAAACAGTCCTGATCTTGTGTATCAAGAAAAGTTTTACTAATAATATTA
TTAGTGCACTCAAACAACGCTTTTTCCCGCCTTCACTCCCCCCCCCCCCC
AGCACACTGCTAGAACAAAGTCGTTGCAGCCAGTACAGGAATTTGTGTGA
TGTTTTGTGTATGATTTGAAGAGAAAAACGACACCCGATATCGAAAGGGT
ATCCAAGCGGTGATGCTTGGGGTGTTTTAGGTCTCTATTTTTCAGCATTC
TAGTTTTTTTAACGCTTATATTTTGGTATTTTTTTTTTAGTAATCTGTAT
TTCAAGTGTTTTTTTAACATCTTTGAGTTGTCCAAATAATCATCAATTTT
TCCAACGCCTTTGTTTAGTCTCTTTTAAAAGTAAGGTGTATTTCAAAAGT
TTTTTAGTATCTTTAAATTGTCCTGATCCACTTGTAATTTGTTTTTCAAA
GAGTCTATCCTTCAGCTTTCGTTTTTCACAAAAAAATGGTATATCTCGAA
GTAATCGACCTTTTGACCATTTTCCAGCGCAGTTGGGTGGAATAATTCTC
GACAACTCCTTGCAATTAATCAAAGGAAGAACACATAGACGCACTTCCTT
GCCTCACCTCTGCGTGACGGCGATTAATCGATCGATGAAGGATGAGGGAT
AGCTACTCCTTTTATGCCTCACCTCTAGAGCCTTGAGCAGATGGCTTCGT
TACTAACATCTATCTGCGTCTTTGTTTTTTTCCTCATTCTCCTGCCTCTC
TGTCTTATCTCTTTTTGTTTCTCTTTCTCACTTATATATCGATAGCATGA
CATTAGATGACCTAGCCTAACATGTGATGATATCGCCTAACATGGCATGA
CATGGCTTGACTGGCTGCATGCATGCAGGAAACGGTCGATGTGATGGAGG
GCCTCACAGACTTCCAGGCAGCCAAGATCGCGAAACACCTCAAGCTGGAG
GGTCCGTCCTTTGACGCGGTGAGACCTACATTGACCCTCCCACCAGTACA
CACGGACAGGCACCCAACTAGGTTTGGCCAGTGAAAAAATCCGATTCTGA
GATCAGGCTTTTTCTTGCAGTAGTCGTTTTTTTTTCCTTTTTTCCTTTTC
TTTTAGGTGCTGCTTTCGATTGATAGGGTGTTTTAGATCCGGTGCTGTTC
GAGTCTTTCCTGCTTTTTTCTCCAGTGGGTGTTTTTTTTATAGAGCCATT
CTACGTTCTAAGAAATTTTATCGATGAATACTACCAGTGCCTACCGACCT
GCCGACCTGCCGCAGCGCTTCCCATCCCTACCGCCTACCGCCTTTCTTCC
TAGATATATTATCTACAGTATCTAGCTCTACCGATAGATCTAAATGTACC
CCGTCGGTTGGTTCACGCCTAATAATAATATTAATATACTATTAGGGTAA
ACGACATAACATGGTATACCCTGGTCAAAATGTGACACAGCAGGGTACCC
ACTTATTTACAGCGTGAAACGGGCACAGCTGATTACCCGACGCACACTTT
AAACTTGCCTTGTCCGAAAAACGACTGGTATACCCTGCCGCGGCTACTTT
CCTCCAGAATTATACCCCGATTTTCGGAAATGTACCCTGACCGGGCGAGA
AGTGGGACCCTTCCATCGGCCATTTCCCCAGCACGAATCACTTTCTGCTC
CTACCAATGAACGCTGAAACACTAATCTTCCTGCCCTAAACAATGGCAAC
CAGCAGCAATTCATCAGGGCGGTCCTTCCACTCCTACCAAAGAGCACCAA
AACATTAAATCTTCCTCTTCTAAACATACAATGCCACTTTTTTACAGCGT
GAAACGGATATAATGTGTAAAGAGAGGGACCAAAAAAACAAAACACGCAC
ACCATCAGAAAGATAGCAGCAGGTGCCAGACTTTGGCTTCAGATGGCCTT
CGCTCGAGCACGGTTGTTTAGGCTGCAGCGCGTTGAACCTTTCTACGCAC
GCAGCTGAAAATGGTAAAAGTGCGCATGCTCGTGTGTAGTTTGGGTTGGG
TTATGTTTACTCTGTAATTAATATATAGCCCTAAATGTAGTTTAGATAGA
AGTAAAGTTGGGTTATGTTCACGCTGTAATTAATGTATAGCCTAAATGTA
GTGTAGATATAAGTAAAAATCGGGTTATGTTCATTTTGTCATTAATATTT
GATCTTTAATGTAGTGTAAATGCAGTTGGATTTAACATCACACTGCCACA
CACACGAAATACAGCCACACGTGTCACTTCGATAACCTGTCACGATGACT
TTCGAAAGGTATTAAGCCTTGAAAGGCCACCTTGAAATACGTAGAACTAC
AACAGGTCGATATATTCTTGAGATAGACTCTACGTAGCGCTTGACCCCGC
CCCCGCCCGTTCTGCACTGTTAAAGAAATCCCCAAATACTTTGCCCCAGT
CGTTCTCTGCAGGTAGTGTCCATGGACGCTGGCCACCTCAAGGGTTCGTG
GAAGGGGGCCATGTACACCCTTTACATGGAGGATAGCAACAACCACATCA
TTCACATCGTCGCCGACAAGGAGAACGAGACCAAGTACAGGTTCCTGCTT
GAGCAGACCTGCACGAACGAACACATAAAGCGAGTCCTTTCCTTCGTCAC
GGGGGCGTGGTTTTCATCGATGGGCACAAATGATCACCCCTGGCCCTCTG
TGCCTATTTATGAAGAACGCCGCCATGCTGGAGGAAAGGAATCGCTTCAT
GTGTTTGTTCTTGCAGATCTGCTCAAGCAGGAACCTGTAGTTGGTCTCAT
TCTCCTTGTCGACGAGGACAGTGGCGAAGTGAATGATGTGGATGTTGTTA
TCCTTCATGGAAAGGATGTTCATGACCCCTTCCACGAACCCTTGAGGTGG
CCCAGCGTCCATGGACACTGCCTACAGAGACCGACAGGGGCAGAGTGTTT
GGGGATTCCTTCAACAGTCATACTGCTACCGAAGAAACCCTCGAGAACTC
CCCCTTAGCTCAGCTCACGCAAACGGCCCTCCCTTTATGGGACAAAAATA
TGGCACACAAACGAACACGGGAGTGTCGGGTTTTTTTTCGGCAGAACGAA
GTCGGGAATAGTCATTGACCGCAAAGTTTCAGCGCACGGATGGCGTGTTT
CGGCCAACCAGCCTATCGAGTTTTGGGAAAAATCGGGTACACATAAGGAG
CAGCATTTTTTGGGATAACAGTGCTTTTCCGTGTAACTCGTGCACCAAAC
CGAATGTTTAACGTACAAAACGGTATTCTAAAGAAACCTAGTTCGAACAC
ACACGCCAATTCGTCACGCGAGATGGCGACATGGCGCGGACAAAAATCAT
CCAGAACAAAGTGGCAATATAAAAAGTGGGTAAAAGTTAGTTATACATGC
TCGCGGCGCAAAACTGCGCAGTCCCGCGCATTGTGCTGAAAAACAACTGT
TGAACTTGTTCTGACCACTTTAGACTCCTGAAACACCGTGGCGGCTCGAT
ATTGGCGTGTACCCCATTTTGATCGTTTCGCACCACTCTGTACCCGGACT
ACTACCGTATGTACCATCATAAGCATTTGTGGGGTATAAATAATTGTGCG
CTTTAACCCTCGGGTTCATTGATTAACACCTCGTTGGATTGGCTATGGCA
TAATGCATGTTAGTGAATGATGCGTGCTACACAAGCACGTACACTTGTTG
TATAGATTACAGGCACCAGGCAGGGTGTACCCGATTTTGATCGTTTTGAA
ACACTCTGTATGTATATTTACAAACATTTGCGGTGTATAAAAGACTGCTG
TTGTACGATTCAACTCTCAGTATGAAGAATGTCGTACGCTTCAACCCTCA
GGATTGACTAGGGCATAATGTATGTTCGAGAATGAGGCGTGCTACACATG
CGAATGTACTTGTTCTATGTACCCTGGAGTGTCGTATTTTAGTAGCTGTG
ATCATCCCACGTACAGCAGTAGGTAAAACTCAGCGAAATTAGCAAGTCTA
CCACGAGTATCGCAAAACGAGGGATTATCTTAGCTCAGCGGAGGAACGCT
GTGTCCGGCGGCGTAGTCGGCATTCCCCAGCATCGTGAAACTCCTCACGT
ACCGGCCGTAGGGGCTCACACATGAGCAAAGCTATGCGCATCCTTCGCGA
ACAACGGGCACAGCTACCGGGCTAATCCTTGTGCGGGAAGACCATCCACC
GACCATAAACCTGACGCTCATCTCGACCGTGGCGACAAAGCCCGGGCAGT
TGCGCGCGATGGCATCCACTTCGTCGTCCTTGTTAGCCTTGGTTACGCGC
TGCTTCGCTCTATGGAATGTCCGATCGTTGATCTCGAAGCCCGCGGTCTT
GAGGGTTTGCTTGATACCAGGACCACCGATCTTGGGATTGTCCCCTACAA
GCTGGTCCACCATAGGCTGCACAACGTTTGAACCCGTACGCCCGCCCTCA
ACACAGTTGACGTAATCTTTCCCAACCTCGGCGATCTTGAACTTACCCGT
CTTTTGCACGTAGCCCTTTACAAACCGAGTCGTGCAACTCCGGCATACCA
CGAGTAGATGCCGGCTCCCGGCACCTTTTCCATTTTTGATGGAGCGACCA
ACGGGGGCAAGCTCAGTCTCTGCTGCCATCTTCGCCGCCTGCCGACTTGT
AAATACTTCACCAGCCTCTACTGACGTAATATTCAGAGACAAGCCTGCTA
CCGCAGCTCTCGCGCCACCGTTCTCCCCTTCCATCGGTGTGTTTGTGTCC
TTTGGTCTTTCTCTACACACCATGTATGTTCCATGCTGTAAAAAAGTGAC
ATTATATGTTTAGAAGAGGAATGTGTTGGTGCTCTTTGGTAGGAGCGGAA
GAACCACCCTAATGAATTGCTGCCGGTTGCCATTTTTTGTTTAGAGCAGG
AAGATTTGTGTTTTTGCGTCATTTTATCCCTCTCTCTGCACATCATGCCA
GTTCCACGTTGTAAAAAAGTGGAATTGTATGTTCAGAAGAGTAAGAGTTG
ATGTTTTGGTGTTCTTTGGTAGGAGTGGAAGGACCGCCCTGATGAATTGC
GGCTGGTTGTCATTGTTTAGTTTTTTTGTGTTCTTTGGTGGGAGCGGAAA
ATGATTTGTGCGGAGAAAATGGCCGATGAAAGGGTCTCACTTCTCTTCAG
ATCAGGGTACATTTCCGAAACTCGAGATACAATTCTGGGGTAAAGTAGCC
TCGTCAGGGTATACCCCGCCGTTTTTCCGACACGGCACGTTGAACGTGGG
CGCCCACCAATCAGCTGCGCCCGTTTCACATTATAAGTAGATACCCTGTT
GTGTCGCTTTTGAACAGGGTGTACCCTGTTATATCGTTTATCATAATAGT
ATTATTTATAGTGTTTTCAGTATTACCAGTATCACAAAACCTTTTATCGC
GATACAGGTTCAGCACACTCGTACACTCCTGTCTATTTATCTATCTATTG
ATCGATTTATCTACGGTATCTCTATCTACATGATTGACGCCGTACGTTCT
CCGTCCATCCCCGCTCCCCGCTTATCCAGGGCAAGACTCTCCTAAAGAAC
ATGTACGGCATGTTCGCCGAGAAAGACTGTACGCTCGTCGAGATCAACCC
GCTCGCGGAGACTGCAGACGGCCGCGGTGAGAAAAACAGCAGTAGCAGCA
GCCGTCGCCGCCGTTTTTCTCCCCTTCCTATTGCCTATCGCTGGATTAAG
AGGTTAATGGGGAGAAGGGGTCTACGGGGTGGTGCGCTATTCGTCCATCC
CGGCGTATGGTTGGCATGGTTTGCCTCCAACAACGCAACTGTCACGTCTC
GAACGTCCGTACGGTTTTTTTTTTTTTTTTCATCAAATCGACAGGGATGT
GGAGACAGAGGGTGTAATAAAATGTTGCATGTTTCAGCTCTTAGTTAGAC
CATTGCATCCTAACAGATAAATTTACTATCATCCAAACAGTGCGACGGAA
CGATGTGCCGGGGGTTTCCGACCAGACCACGCCAGGCCAGCCTGCGTTTC
ACAAGGATGATGCCAGCTTTTAGTCATCATCCTTACGTCTGTCACGCCAA
CCAAACCGGACATGACACACCGGGTATCAAACTGTTTCACGTTTAGCGGG
CGCGACTATGCTCTCAATGTACCGCAAAGGCACTTTTGAATCTTCGCGCT
AACGCATAAGCGCCGCATGCACACCACGTGGACACCCTGTATGAACTAAC
TCCCCCATGTCCTATAAATAGCGGTTTTACAATATACATATGCCAGAAGA
GCCAAGGCGGGAGTAATAACAGGCGGGGGAGTTCTCAAACGTTTCCGATT
CGGGGAGGGAAATAGTAATTTCGTCCCCTTACGGGCACAAACCGTATATA
TACCCTCTTCGACGGTGATGCATTCAAAATGAAGTGCAACGAATGGAGAT
ACGATTATGGAATCTCCGGAATGCGACGAGCTTCGACCCTCCGTTCCTCA
AATCAGGGACAATCAAGTAACTTTTTCCTCCCATCGATGGATTGCTCGGG
GTAAACCAAGTTTCTGTATTTGTTGGCGTCTGTGGAAGCAGAGTCTATAA
CGTGACCATTTCGGTTGGAGAGGGGGACGTTTGAGGCAATAATCCGGAGT
AGCTCCGCGAGCGCGCCATGTTCGTACGCGAGGTTATATAGTATATTGTA
TAATATCATATTATGTAGTGTGTAGTATATAGCGCAGCATCAACCACTAT
TCGAATGAGAAGCTCGTCTTGCTTGATGGAACGAAACACCGGGGGGTTAT
TTTTAGTTTTTAGTTTTTTCCCTTTTGTGTCCTTCTTGTCCCCCCTTTTC
TGCCTTTTTTTCCTTTTATTTTTCTAAAAAAGATATGAACTCAATCAAAC
CCCCCGAACATTTTGCTTTTTTTATCAACAGAAAAACACATCTATTGTTT
TCTATCCCCCCCCCCTCCATGTGATTTGGTTGTTTTTCATTTTTGTATTT
TTATTCATAGTATGCAGTACTATTTATTTTCAATGTATTTTGGCACTTTT
CACTATAATGTTTTGAGCTTTCAAAACCGAAACCAGTATTATTATTTTTT
TCTAAAAAATTGTCGGTGGCTCTGCTGCTCGAAAAGTTAAAAGGCACACA
CCACACGATTAGCTTTGGCAGTTATGTTTTTGACAGTTATACGACACTAT
TGGCCTTGACAATTGTGTTTTACTGCTGGCCTTGACAGTTATGTTATGCC
ATTGACCTTGGCAATTATGTTACGCCATTGGCTTTGACAGTTATGTTACA
TCATTGGCCTTGTGAGTTATTTTGCACTGTACCGGTATTCGATTCCTTCA
CTCGGACGAAAAACTGATACAACGGTTTTGGCGACAACGCAGTTATGGCT
TGCGACGCGAAGCTGAACTTCGACGACAACGCGGAGTGGCGTCAGAAGGA
GACATTCGCGTTCCGCGACTTCACGCAGGAGGACAGCCGCGAGGTGTGTA
ATGTATGCTTTTATAGAGTAGGTTTTAGTTATGTTTAGTACCGCATTATG
GTAGGTATAGTTTAGTGTAGTGTAGCAGTGTACCTGGTATAATATTATTG
CACAGTATTATATTATTAGATTTTATCCTGTACTGCAGTATTATACATTA
CAGAGTAATGCCGAGAATAACGTAGCGTAGAGCTTGGTACGTTTTTTATT
TCAAGACAGCGTAATGAAGAGTGTCGTTTCGATTTGTATAGGAGTAGCGC
AGTTTTGTCTCTTTGTATGTATTTGTTCTTACAGCACATTTAACAGATCG
GGCCTCAATCATACCAACTACTATAGACGATTGACAGTCCGGTTTGTTCG
GAAGTCTGCTGGACAGGTTTTCCATTGGAGGAGGGAGGAGGGGATTTGCA
AATCGATGCGGCACACTCTTTCGTGTCAAGCCGGTTTGCGCGGTCTAGAA
TTGATACTTCGTATAAATTGAAGAACGGGAGATCCCAGCAAGTACTACTA
CTTAGCAAAAACAAATAATTAATATGAGACAGAGCGTAAACAACCACGCT
CGCTGTATGCGGTAGCTCTAGTTCTAGTAAAATCAAGTAATGGGAAGCGA
TATTAAACGCCTGGCCAGGGGCCACCTCTTGAAACTCACGAGGTTTTAGG
GGAAAACCGTGTTTAAAAATAAGGGAAAAGTAGTATATTTATAATTTTGT
AAGGCTTAATTACCACGCGGCCTTCCCTTTATTTTTTTTGTCTCTTTTTA
TTTCATCAGGTGGAAGCTGCGAAGTACGACCTGAACTACATCGGCCTCAC
CGGCAATATCGGTTGCATG
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Coding sequence (CDS) from alignment at H-elongata_contig6601:43..9661-

>mRNA_H-elongata_contig6601.14190.1 ID=mRNA_H-elongata_contig6601.14190.1|Name=mRNA_H-elongata_contig6601.14190.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=984bp|location=Sequence derived from alignment at H-elongata_contig6601:43..9661- (Himanthalia elongata Himel1 dioecious)
ATGGAACGGATGTACATTCGCCGGGAGATGTATCTGTCCATAATGATGGA
CCGCGCATCGCAGATGGAACGGATGTACATTCGCCGGGAGATGTATCTGT
CCATAATGATGGACCGCGCATCGCAGGGACCCGTAATCGTGGCTTGCCCT
GACGGAGGCACCTCCATCGAAGACCTCGCCGAGTCGAACCCGGAGCTCAT
CCTAAAGGGACCCGTAATCGTGGCTTGCCCTGACGGAGGCACCTCCATCG
AAGACCTCGCCGAGTCGAACCCGGAGCTCATCCTAAAGGAAACGGTCGAT
GTGATGGAGGGCCTCACAGACTTCCAGGCAGCCAAGATCGCGAAACACCT
CAAGCTGGAGGGTCCGTCCTTTGACGCGGAAACGGTCGATGTGATGGAGG
GCCTCACAGACTTCCAGGCAGCCAAGATCGCGAAACACCTCAAGCTGGAG
GGTCCGTCCTTTGACGCGGGCAAGACTCTCCTAAAGAACATGTACGGCAT
GTTCGCCGAGAAAGACTGTACGCTCGTCGAGATCAACCCGCTCGCGGAGA
CTGCAGACGGCCGCGGGCAAGACTCTCCTAAAGAACATGTACGGCATGTT
CGCCGAGAAAGACTGTACGCTCGTCGAGATCAACCCGCTCGCGGAGACTG
CAGACGGCCGCGTTATGGCTTGCGACGCGAAGCTGAACTTCGACGACAAC
GCGGAGTGGCGTCAGAAGGAGACATTCGCGTTCCGCGACTTCACGCAGGA
GGACAGCCGCGAGTTATGGCTTGCGACGCGAAGCTGAACTTCGACGACAA
CGCGGAGTGGCGTCAGAAGGAGACATTCGCGTTCCGCGACTTCACGCAGG
AGGACAGCCGCGAGGTGGAAGCTGCGAAGTACGACCTGAACTACATCGGC
CTCACCGGCAATATCGGTTGCATGGTGGAAGCTGCGAAGTACGACCTGAA
CTACATCGGCCTCACCGGCAATATCGGTTGCATG
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