mRNA_H-elongata_contig65904.14175.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig65904.14175.1 vs. uniprot
Match: D7G3V5_ECTSI (AAA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3V5_ECTSI) HSP 1 Score: 310 bits (794), Expect = 1.360e-101 Identity = 154/195 (78.97%), Postives = 176/195 (90.26%), Query Frame = 1
Query: 1 CPFADDPVKAAMEALEERVRAQPLAVESLSKALSAWHFSQRSGRHEPLVVALTGSTGTGKTETAWVLGEAMLTKRCRISGGTKDIPRGLLVFNGGDYITTSRVEEYQKQIRKKLGQRLEYCGGNVVVLFDELQKAAPGTLDA----MSEHPRVTYDDGGQSVSVDSSRVVFLLVSDVGAEGVNAAVLRYRRRSDV 573
CPFADDPV+AA AL++ + AQPLA+ESL ALS+WH+S++S R+EPLVVALTGSTGTGKTETAWVL +A+LTKRCRI+GGT+DIPRGLLV NG DY+ ++VEEYQ IR+KLGQRLEYCGGNVVVLFDELQKAAPGTLDA MSEHPRVT++ GGQ+VSVDSSRVVFLLVSDVGAEGVNAAVLRYR+RSDV
Sbjct: 57 CPFADDPVEAARRALQDGILAQPLALESLDGALSSWHYSRQSDRYEPLVVALTGSTGTGKTETAWVLADALLTKRCRITGGTRDIPRGLLVLNGADYMVAAKVEEYQSLIRRKLGQRLEYCGGNVVVLFDELQKAAPGTLDALAEAMSEHPRVTFERGGQNVSVDSSRVVFLLVSDVGAEGVNAAVLRYRKRSDV 251
BLAST of mRNA_H-elongata_contig65904.14175.1 vs. uniprot
Match: A0A7S4DD61_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DD61_HETAK) HSP 1 Score: 161 bits (408), Expect = 2.310e-44 Identity = 87/199 (43.72%), Postives = 123/199 (61.81%), Query Frame = 1
Query: 1 CPFADDPVKAAMEALEERVRAQPLAVESLSKALSAWHFSQRS--GRHEPLVVALTGSTGTGKTETAWVLGEAMLTKRCRISGGTKDIPRGLLVFNGGDYITTSR--VEEYQKQIRKKLGQRLEYCGGNVVVLFDELQKAAPGTLD----AMSEHPRVTYDDGGQSVSVDSSRVVFLLVSDVGAEGVNAAVLRYRRRSDV 573
C + +D V A + +R++ Q A +++ KA W + G PLV+A+TG TG GKTETA VLGEA+L +R P+GLLVF G D+ + + Y +I+ +L L +CGGN VVLFDE+QK PGTLD AM+EHP++T+ G++V+VD S+V+FLLVSD+G E + + L YR RS+V
Sbjct: 45 CSYVEDTVAAIRKYYPKRIKGQQQAFDAIVKAFQYWEMGRAGAGGSKTPLVLAITGPTGVGKTETAHVLGEALLARRSARGXXXXXAPQGLLVFRGEDFSDAAAMPISRYHTEIKSRLVAHLRHCGGNAVVLFDEVQKVVPGTLDVLMEAMTEHPQLTFFSNGKAVTVDCSKVIFLLVSDIGWERMVSRQLLYRTRSEV 243
BLAST of mRNA_H-elongata_contig65904.14175.1 vs. uniprot
Match: A0A7S2V512_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V512_9STRA) HSP 1 Score: 163 bits (413), Expect = 2.600e-44 Identity = 84/198 (42.42%), Postives = 126/198 (63.64%), Query Frame = 1
Query: 1 CPFADDPVKAAMEALEERVRAQPLAVESLSKALSAWHFSQRSGRHEPLVVALTGSTGTGKTETAWVLGEAMLTKRCRISG-GTKDIPRGLLVFNGGDYITT--SRVEEYQKQIRKKLGQRLEYCGGNVVVLFDELQKAAPGTLD----AMSEHPRVTYDDGGQSVSVDSSRVVFLLVSDVGAEGVNAAVLRYRRRSDV 573
CP+ + P++A L +R++ Q A +++ A W ++ +PLV+A+TG TG GKTETA VL EA+L KR ++S G + P GL++F G D+ + + +Y +I+ +L L +C GN VVLFDE+QK PGTLD AM+EHP +TY G++V++D S+VVF+LVSD+G E + + L Y RSD+
Sbjct: 164 CPYVEAPIEAVQGLLPQRIKGQEKAQQAILSAFQYWEMGRKQASQQPLVIAITGPTGVGKTETAHVLAEALLQKREKVSETGDRTRPAGLIIFRGEDFSDAEGAPLAQYHTEIKSRLVNHLRHCAGNAVVLFDEVQKIIPGTLDVIMEAMTEHPTLTYFADGKTVAMDCSKVVFILVSDIGWEKMVSKQLTYHDRSDI 361
BLAST of mRNA_H-elongata_contig65904.14175.1 vs. uniprot
Match: A0A485KDB2_9STRA (Aste57867_2684 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KDB2_9STRA) HSP 1 Score: 157 bits (396), Expect = 1.490e-42 Identity = 82/198 (41.41%), Postives = 124/198 (62.63%), Query Frame = 1
Query: 1 CPFADDPVKAAMEALEERVRAQPLAVESLSKALSAWHFSQRSGR-HEPLVVALTGSTGTGKTETAWVLGEAMLTKRCRISGGTKDIPRGLLVFNGGDYIT--TSRVEEYQKQIRKKLGQRLEYCGGNVVVLFDELQKAAPGTLD----AMSEHPRVTYDDGGQSVSVDSSRVVFLLVSDVGAEGVNAAVLRYRRRSDV 573
C F D P + L ++AQ A+ES+ A+ +W FS+ + + H PLV+A+TG TGTGKTET+ +L E + R R+ K++P GLLVF G D+ T+ + EYQ+QI+ +L + + +C G VV+FDE+QK P TLD AMS++ ++TY GG + VD S V+F+L+SD+G + +++Y R DV
Sbjct: 79 CGFVDHPSASVRTHLTSHLKAQDRALESIVGAIESWEFSRSNSKDHAPLVLAITGPTGTGKTETSNLLAEGLFKHRKRLQHSEKEVPSGLLVFRGEDFSDNYTNPLTEYQEQIKTRLAEHIYHCSGKAVVVFDEVQKVIPHTLDVLTSAMSKNAQLTYYKGGVARKVDCSNVIFVLISDIGVANMEKILIQYDNRDDV 276
BLAST of mRNA_H-elongata_contig65904.14175.1 vs. uniprot
Match: K3WL49_GLOUD (AAA domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WL49_GLOUD) HSP 1 Score: 154 bits (389), Expect = 4.430e-42 Identity = 80/194 (41.24%), Postives = 121/194 (62.37%), Query Frame = 1
Query: 1 CPFADDPVKAAMEALEERVRAQPLAVESLSKALSAWHFSQRSGRHE-PLVVALTGSTGTGKTETAWVLGEAMLTKRCRISGGTKDIPRGLLVFNGGDYIT--TSRVEEYQKQIRKKLGQRLEYCGGNVVVLFDELQKAAPGTLDAMSEHPRVTYDDGGQSVSVDSSRVVFLLVSDVGAEGVNAAVLRYRRRSDV 573
C F ++P ++ LE ++AQ A++S+ A+ AW FS+ S + + PLV+A+TG TGTGKTE + +L E++ +R R+ K + GLLVF G D+ T+ V EY QI+ +L + L +C G VV+ DE+QK P TLDA+S + TY G S S+D+S V+F+LVSD+G + +++Y R DV
Sbjct: 47 CTFVENPSQSVRSYLETHLKAQDRALDSVVAAIEAWEFSRSSNKDQSPLVLAITGPTGTGKTEMSNLLAESLFKRRKRLPNSEKVVASGLLVFRGEDFSDNFTNPVTEYHTQIKTRLAEHLHHCSGKAVVVIDEVQKVIPHTLDALSSRAQFTYYKNGISRSIDTSNVIFVLVSDIGVVEMERVMIQYEAREDV 240
BLAST of mRNA_H-elongata_contig65904.14175.1 vs. uniprot
Match: A0A6G0W9D6_9STRA (AAA domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W9D6_9STRA) HSP 1 Score: 152 bits (385), Expect = 5.470e-41 Identity = 77/198 (38.89%), Postives = 126/198 (63.64%), Query Frame = 1
Query: 1 CPFADDPVKAAMEALEERVRAQPLAVESLSKALSAWHFSQRSGRHE-PLVVALTGSTGTGKTETAWVLGEAMLTKRCRISGGTKDIPRGLLVFNGGDYIT--TSRVEEYQKQIRKKLGQRLEYCGGNVVVLFDELQKAAPGTLD----AMSEHPRVTYDDGGQSVSVDSSRVVFLLVSDVGAEGVNAAVLRYRRRSDV 573
C F D P + + L+ ++AQ A+E++ A+ +W FS+ + + + PLV+A+TG TGTGKTET+ +L E + +R R+ K+I GL+VF G D+ T+ V EYQ+QI+ +L + L +C G +V+FDE+QK P TLD AMS++ ++TY G + VD S V+F+L+SD+G + +++Y +R ++
Sbjct: 74 CRFVDHPSVSVRKHLQTHLKAQDRALETIIGAIESWEFSRSNSKDQAPLVLAITGPTGTGKTETSNLLAEGLFKRRKRLEHSEKEIASGLIVFRGEDFSDNFTNPVTEYQEQIKTRLAEHLSWCSGKAIVVFDEVQKVIPHTLDVLTSAMSKNAQITYYKNGVARKVDCSNVIFVLISDIGVAAIEKLLMQYDKREEI 271
BLAST of mRNA_H-elongata_contig65904.14175.1 vs. uniprot
Match: A0A836C741_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C741_9STRA) HSP 1 Score: 157 bits (396), Expect = 7.100e-41 Identity = 90/225 (40.00%), Postives = 121/225 (53.78%), Query Frame = 1
Query: 1 CPFADDPVKAAMEALEERVRAQPLAVESLSKALSAWHFSQRSGRHEPLVVALTGSTGTGKTETAWVLGEAMLTKRCRISGGTKDIPRGLLVFNGGDY------------------------------ITTSRVEEYQKQIRKKLGQRLEYCGGNVVVLFDELQKAAPGTLD----AMSEHPRVTYDDGGQSVSVDSSRVVFLLVSDVGAEGVNAAVLRYRRRSDV 573
CP+A+D A + L +++ Q LAV+ + KA +W F +++G +PLV+ALTG TG GKTETAW + EA+LTKR +P G+L F+G ++ + V Y QIR++L L C G+ VVLFDELQK APGTLD A+ P +T G +SVD S +V LLVSD+GA V A+L Y RR DV
Sbjct: 606 CPYAEDAPAAVRKVLTAKIKGQSLAVDQIVKAFESWQFQRKAGLRQPLVLALTGQTGVGKTETAWQVAEALLTKR------QHGVPTGMLRFSGQEFEVVRVLXXXXXXXXXXXXXXXXXXXXXXXXADVNNVARYHDQIRRQLADVLVPCAGHAVVLFDELQKVAPGTLDVLVPALENRPMLTLPRGRSYISVDCSNLVVLLVSDIGAAAVRGAILPYARREDV 824
BLAST of mRNA_H-elongata_contig65904.14175.1 vs. uniprot
Match: A0A3L6V0S8_9STRA (AAA domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6V0S8_9STRA) HSP 1 Score: 146 bits (368), Expect = 1.630e-39 Identity = 82/198 (41.41%), Postives = 119/198 (60.10%), Query Frame = 1
Query: 1 CPFADDPVKAAMEALEERVRAQPLAVESLSKALSAWHFSQRSGR-HEPLVVALTGSTGTGKTETAWVLGEAMLTKRCRISGGTKDIPRGLLVFNGGDYIT--TSRVEEYQKQIRKKLGQRLEYCGGNVVVLFDELQKAAPGTLD----AMSEHPRVTYDDGGQSVSVDSSRVVFLLVSDVGAEGVNAAVLRYRRRSDV 573
C F + P A + L+ ++AQ AV+ L ++ AW FS+ + H PLV+ALTG TGTGKTE++ +L EA+ R+ KD P GLLVF G D+ T+ V +YQ+QI+ +L + L C G +V+FDE+QK P TLD AMS + +TY GG +D++ VVFLL+SD+G + +++Y R V
Sbjct: 68 CTFVEHPSLAVRKHLQANLKAQDRAVDVLVASIEAWEFSRTHAKDHAPLVLALTGPTGTGKTESSNLLAEALFKWTKRLDHSDKDSPSGLLVFRGEDFSDNYTNPVSQYQEQIKSRLAEHLFRCSGKALVVFDEVQKVIPHTLDVLTSAMSSNAHLTYHRGGVERRIDTADVVFLLISDIGVAKMEQLLIQYDDRRHV 265
BLAST of mRNA_H-elongata_contig65904.14175.1 vs. uniprot
Match: A0A2D4BEI3_PYTIN (AAA domain-containing protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BEI3_PYTIN) HSP 1 Score: 147 bits (370), Expect = 5.890e-39 Identity = 79/198 (39.90%), Postives = 121/198 (61.11%), Query Frame = 1
Query: 1 CPFADDPVKAAMEALEERVRAQPLAVESLSKALSAWHFSQRSGRHEPLVVALTGSTGTGKTETAWVLGEAMLTKRCRISGGTKDIPRGLLVFNG---GDYITTSRVEEYQKQIRKKLGQRLEYCGGNVVVLFDELQKAAPGTLDA----MSEHPRVTYDDGGQSVSVDSSRVVFLLVSDVGAEGVNAAVLRYRRRSDV 573
C F + P A + L +R+RAQ A+ES+ +A+ AW F R+ PLV+A+TG TGTGKTET+++L E++ + ++S G + + GLLVF G GD ++ + +Y QI +L + L C G VVLFDE+QK P TLDA MS+ ++++ G + + D+S V+FLLVSD+G + + Y+ R +V
Sbjct: 33 CRFVERPAHAVRQYLTQRLRAQESAIESVVEAIEAWEFHHRA----PLVLAITGPTGTGKTETSYLLAESLFKRSRKLSNGDRTVASGLLVFRGEHFGDNVSNP-ITQYHTQITTRLAEHLHMCSGKAVVLFDEVQKVIPHTLDALMEAMSDRAQLSFYHKGVTKTYDTSNVIFLLVSDIGVREIERVMTSYQSREEV 225
BLAST of mRNA_H-elongata_contig65904.14175.1 vs. uniprot
Match: A0A8K1C6J6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C6J6_PYTOL) HSP 1 Score: 147 bits (370), Expect = 1.130e-38 Identity = 78/198 (39.39%), Postives = 122/198 (61.62%), Query Frame = 1
Query: 1 CPFADDPVKAAMEALEERVRAQPLAVESLSKALSAWHFSQRSGRHE-PLVVALTGSTGTGKTETAWVLGEAMLTKRCRISGGTKDIPRGLLVFNGGDYIT--TSRVEEYQKQIRKKLGQRLEYCGGNVVVLFDELQKAAPGTLD----AMSEHPRVTYDDGGQSVSVDSSRVVFLLVSDVGAEGVNAAVLRYRRRSDV 573
C F D P ++ + L + ++AQ AVE++ A+ +W FS++S + PLV+A+TG TGTGKTE + +L EA+ + ++ K +P GLL+F G D+ T+ + EY QI+ +L + L C G VV+FDE+QK P TLD A+SE +++Y G S ++D+S V+F+LVSD+G + ++ Y R DV
Sbjct: 72 CVFVDKPSQSVRQYLLKHLKAQDGAVETVVAAIESWEFSRQSSKDRAPLVLAVTGPTGTGKTEMSNLLAEALFKRTKKLPNSEKLVPTGLLIFRGEDFSDNFTNPITEYHTQIKTRLSEHLHQCSGKAVVIFDEVQKVIPHTLDVLMEAVSERAQLSYYKNGVSKTIDTSNVIFVLVSDIGVAEMEHVLIDYENREDV 269 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig65904.14175.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig65904.14175.1 >prot_H-elongata_contig65904.14175.1 ID=prot_H-elongata_contig65904.14175.1|Name=mRNA_H-elongata_contig65904.14175.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=191bp CPFADDPVKAAMEALEERVRAQPLAVESLSKALSAWHFSQRSGRHEPLVVback to top mRNA from alignment at H-elongata_contig65904:1339..2762+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig65904.14175.1 ID=mRNA_H-elongata_contig65904.14175.1|Name=mRNA_H-elongata_contig65904.14175.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1424bp|location=Sequence derived from alignment at H-elongata_contig65904:1339..2762+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig65904:1339..2762+ >mRNA_H-elongata_contig65904.14175.1 ID=mRNA_H-elongata_contig65904.14175.1|Name=mRNA_H-elongata_contig65904.14175.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1146bp|location=Sequence derived from alignment at H-elongata_contig65904:1339..2762+ (Himanthalia elongata Himel1 dioecious)back to top |