mRNA_H-elongata_contig657.14152.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig657.14152.1 vs. uniprot
Match: D7FRK0_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRK0_ECTSI) HSP 1 Score: 429 bits (1102), Expect = 1.730e-128 Identity = 388/974 (39.84%), Postives = 485/974 (49.79%), Query Frame = 3
Query: 978 MSRDQFLQANFHFLLHDPTW----TRGDEKSTSPFYQEAFFNPDVLVDWDTVDTVRLFRNVSN----VSRHPKAVSREGQGPPSTDTRASDQTKNQTNPNFTGKAKASTSVQSFGPSDS----PSQKNEVQEKDADDKDSRPKVAWGS-------------------------ALQPAQQSTSLSLAPSVTTSVTSAASEEASKCVTGVTVTMDGKEEIGDGDVDGDDEWRCPICLQSPIAPRLTKCGHGPFCLVCILRHLRGEAYARCPLCFDNIHRNRLRRAMCEEVVPFKIGERASLLLLQRERASLTPRAIAITSGKSQG--GDITAETKINPPRTVGDEGQEELRAGAACPKEGDDSERYSRLVTAKPSTLCRLAVEEQASLRRFRQDSITSGETEWIPFVSEAQALVDAQVQRFSAILTNLPAADGPGAAVAAAAARGIPPRQRQRQGQ--LLA---PSVEEDQ-ADRSASRGVPRH---------YRRTRHEE---------AGADGRPSSDDHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFRFFQSADGQRAFLHPLDMRQLLDDVDKGLPLPKRIDAQARSAPSAMIVLEVETVKLSRELRRRLPFLGHLPLHCDIAFIEVDIADFVSADTADKFHEETDKREXXXXXXXXXXXXXAVKEAKGEKARAARIAAMRTFTVDLQGPKPGNLQPTSPSRAAHSIPSTQAASSSTGGTTIGTTSGDAAHVQGNRGGTVEELGLESSRGATGPSLENMNMSESSVGGRSTSASSVGRSNRACVSSGGKEGGWSFAKVTAMNGHFPSL-PLTGASPSSNVGPLLGGTSATRGKGTWGRGGTVETRSSGDARAGLGGLSNSSGGVWGEKMPDGSSPRRAERAATGRVAARGGNIDVVLEGGVNAVLDGSRGGVSGNGNSGKKKGRKAKGVSLFTNAGVRG 3707
MS++QFLQANFHFLLH+P W T GD +S SP QEAFF+PDVLVDWDTVDTVRLFR VS VS P + PP+T Q + + +G A A+ + GP++ P K + A ++ V+WGS A A+ +L+++ V + V S + + A+ DG +E G+ +GD W CPICL P+APR+TKCGHGPFCLVCILRHL GEA ARCPLCFD + RN+LRRA C++V P+ G ASLLLL+R+R+SL P A G + G G TA G + AG CP EGD SER+SRLV A PSTL LA EQ +L FR SI SGETEW+P++S+AQALV AQ+ RF+ + P A A G+ P++R G+ L+A P+V+ +S S P H RR + G + + XX XX XXXXXXXXXXXXXXXXXXXXXX FRFFQS DGQ+AFLHPLDMRQLL+D ++GLPLP RIDA+ VLEVETVKL+ ELR+RLPFLGHLP+HCDI+F+EVD+ D VS +T+ KF E+T KRE +EA+ E+ RA RIAAMR FTVDLQGP PG + + +GG +T ++V A VSS G GGWSFA+VTAMNGHFP+L P G+S S +VG G WG +V + G+ + AA A R + VV+EG G +G KKKGRK K VSLF+NAGVRG
Sbjct: 1 MSKEQFLQANFHFLLHNPAWSATTTTGDARSASPGLQEAFFDPDVLVDWDTVDTVRLFRRVSRRKQAVSPPPAVKVKPNPTPPATGXXXXXQGTSDASGCLSGAATAAAPKEEGGPAEREGVPPGFKGLTVLRAAAEEG----VSWGSTSXXXXXXXXXXXXXXXXXXXXXREASAAAESPLALAMSDGVQSRVASPSGDGAAD--------DDGTQEDETGE-EGD--WTCPICLGVPVAPRVTKCGHGPFCLVCILRHLDGEASARCPLCFDKMQRNQLRRAACQDVRPYVPGGTASLLLLRRKRSSLVPVQSASDKGTASGVPGGATASIPGXXXXXXGAVDEGWAAAGGVCPAEGDGSERFSRLVRAAPSTLRDLAAAEQMALLSFRHSSIASGETEWVPYISQAQALVKAQLDRFAGV--------PPTTITAKTATSGLKPQERTAVGRGGLVASGSPAVDATPPGTKSISAETPPHGXXXXXXXXXRRVDSAQRVEADSSSPVGLENGAGTTVGRGSGGSXXGSLVVAPEAAQPSAKGSXXSDKPSLGTRXXXXXXXXXXXXXXXXXXXXXXPFRFFQSVDGQKAFLHPLDMRQLLEDAERGLPLPPRIDAK---------VLEVETVKLTPELRKRLPFLGHLPIHCDISFLEVDMLDLVSDETSRKFREDTQKRERKRRSRVAQEARLKKEEARLERDRADRIAAMRAFTVDLQGPTPGGAEXXXXXXXXXXXXXXX----------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAGLGGVATDETAVA----AGVSSAGA-GGWSFARVTAMNGHFPTLKPDAGSSGSGSVGNNAAA-------GAWGGAASVTSTXXXXXXXXX---------XXXXXXXRGNGLLSSGAAALPTTAVRENRV-VVVEGE----------GAAGPXXXXKKKGRKGKAVSLFSNAGVRG 894
BLAST of mRNA_H-elongata_contig657.14152.1 vs. uniprot
Match: A0A6H5KXX5_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXX5_9PHAE) HSP 1 Score: 397 bits (1019), Expect = 6.610e-117 Identity = 372/986 (37.73%), Postives = 444/986 (45.03%), Query Frame = 3
Query: 978 MSRDQFLQANFHFLLHDPTW----TRGDEKSTSPFYQEAFFNPDVLVDWDTVDTVRLFRNVSNVSRHPKAVS-----------------------------------------------REGQGPPSTDTRASDQTKNQTNPNFTGKAKASTSVQSFGPSDSPSQKNEVQEKDADDKDSRPKVAWGSALQPAQQSTSLSLAPSVTTSVTSAASEEASKCVTGVTVTMDGK--EEIGDGDVDGDDEWRCPICLQSPIAPRLTKCGHGPFCLVCILRHLRGEAYARCPLCFDNIHRNRLRRAMCEEVVPFKIGERASLLLLQRERASLTPRAIAITSGKSQG--GDITAETKINPPRTVGDEGQEELRAGAACPKEGDDSERYSRLVTAKPSTLCRLAVEEQASLRRFRQDSITSGETEWIPFVSEAQALVDAQVQRFSAILTNLPAADGPGAAVAAAAARG-IPPRQR---QRQGQLLAPSVEEDQ-ADRSASRGVPRHYRRTRHEEAGAD---------------GRPSSDDHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFRFFQSADGQRAFLHPLDMRQLLDDVDKGLPLPKRIDAQARSAPSAMIVLEVETVKLSRELRRRLPFLGHLPLHCDIAFIEVDIADFVSADTADKFHEETDKREXXXXXXXXXXXXXAVKEAKGEKARAARIAAMRTFTVDLQGPKPGNLQPTSPSRAAHSIPSTQAASSSTGGTTIGTTSGDAAHVQGNRGGTVEELGLESSRGATGPSLENMNMSESSVGGRSTSASSVGRSNRACVSSGGKEGGWSFAKVTAMNGHFPSL-PLTGASPSSNVGPLLGGTSATRGKGTWGRGGTVETRSSGDARAGLGGLSNSSGGVWGEKMPDGSSPRRAERAATGRVAARGGNIDVVLEGGVNAVLDGSRGGVSGNGNSGKKKGRKAKGVSLFTNAGVRG 3707
MS++QFLQANFHFLLH+P W T GD +S SP QEAFF+PDVLVDWDTVDTVRLFR VS R +AVS E +G P P F G A+ +L++ V + V AS AS G DG EE+G+ +GD W CPICL P+APR+TKCGHGPFCLVCILRHL EA ARCPLCFD +HRN+LRRA C +V P+ G ASLLLL+RER+SL P A G + G G TA NP CP EGD+SER+SRLV A PSTL LA E +L FR SI SGETEW+P++S+AQALV AQ+ RF+++ P A+ A AA G + P++R +R G L +P V S S P H + GAD GR S S XXXXXXXXXXXXXXX FRFFQS DGQ+AFLHPLDMRQLLDD ++GLPLP RIDA+ VLEVETVKL+ +LR+RLPFLGHLP+HCDI+F+EVD++DFVS +T+ KF EET KRE +EA+ E+ RA RIAAMR FTVDLQGP PG + + + GGWSFA+VTAMNGHFP+L P TG+S S +V G +A R WG G V S G+ + AA A R + V G G +G GKKKGRK K VSLF+NAGVRG
Sbjct: 1 MSKEQFLQANFHFLLHNPAWSAATTTGDARSASPGLQEAFFDPDVLVDWDTVDTVRLFRRVS---RRKQAVSPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEREGVP---------------PGFKGLTVLRAXXXXXXXX------XXXXXXXXXXXXXXXXXXXXXXXXAAESPVALAIPEGVQSKV---ASRVASPSGDGA-ADDDGAQGEEMGE---EGD--WTCPICLGMPVAPRVTKCGHGPFCLVCILRHLNSEASARCPLCFDKMHRNQLRRAACRDVRPYVPGGTASLLLLRRERSSLVPVQSASDKGTASGVPGGATAS---NPAXXXXXXXXXXXXXXGVCPAEGDESERFSRLVRAAPSTLRDLAAAEHMALLSFRHSSIASGETEWVPYISQAQALVKAQLDRFASV---------PPTAITATAATGSLKPQERAAVRRGGALGSPEVSSTPPGTTSISAETPSHAGGGA-QRVGADSSSPVGLEDGGGTTVGRGSGGSSSGSLMAAPEAAQLSAKGSSRGDKPSLGTTSSXXXXXXXXXXXXXXXEGSGGP-------FRFFQSTDGQKAFLHPLDMRQLLDDAERGLPLPPRIDAK---------VLEVETVKLTPDLRKRLPFLGHLPIHCDISFLEVDMSDFVSDETSRKFREETQKRERKRRSRAAQEARLKKEEARLEQDRADRIAAMRAFTVDLQGPTPGGAEQXXXXXXXXXX-----------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATDETAXXXXXXXAGAGGWSFARVTAMNGHFPTLKPDTGSSGSGSV----GNNAAAR---AWG--GAVSAASXXXXXXXX-------XXXXXXXXXRGNGLLSSGAAALPTTAVRENKV---------LVGKGEGEGAAGPSGGGKKKGRKGKAVSLFSNAGVRG 876
BLAST of mRNA_H-elongata_contig657.14152.1 vs. uniprot
Match: A0A835YQ46_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ46_9STRA) HSP 1 Score: 145 bits (367), Expect = 5.780e-32 Identity = 202/536 (37.69%), Postives = 254/536 (47.39%), Query Frame = 3
Query: 1554 WRCPICLQSPIAPRLTKCGHGPFCLVCILRHLRGEAYARCPLCFDNIHRNRLRRAMCEEVVPFKIGERASLLLLQRERASLTPRAIAITSGKSQGGDITAETKINPPRTVGDEGQEELRAGAACPKEGDDSERYSRLVTAKPSTLCRLAVEEQASLRRFRQDSITSGETEWIPFVSEAQALVDAQVQRFSAILTNLPAADGPGAAVAAAAARGIPPRQRQRQGQLLAPSVEEDQADRSASRGVPRHYRRTRHEEAGADGRPSSDDHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA-----------------------------------------------------FRFFQSADGQRAFLHPLDMRQLLDD--VDKGLPLPKRIDAQARSAPSAMIVLEVETVKLSRELRRRLPFLGHLPLHCDIAFIEVDIADFVSADTADKFHEETDKREXXXXXXXXXXXXXAVKEAKGEKARAARIAAMRTFTVDLQGPKPG-NLQPTSP 2993
WRCPICL+ P PR+T+CGHGPFC VCILRHL GE Y RL A+ P G+ AS +LL R++ L PR + + GG TA CPKEG + +SRLV AKP L + E A L FR++S+ G+TEW+P++S+A+AL+ V+R + + A P A+ A +A PR A+R +SR R XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX F F+Q DGQ AF+HPL MR LL++ + G LP ++A +LEVET +LS++LRRR FLGHLP HC + F+E+D+A+ +S D+RE + A+R T+DL GP PG + P SP
Sbjct: 133 WRCPICLEHPRCPRITRCGHGPFCAVCILRHLGGEPYRXXXXXXXXXXXXRLAGALLRAHKPPVAGQSASFVLLLRDKEELIPRGV----DRWGGGSCTAW----------------------CPKEGQPAATFSRLVLAKPQQLLQRMATEDAELAAFREESLAGGDTEWLPYISQARALL---VERRAQLSAKGALALSPTASPRANSA----PRSA-----FFTKDGGNHGAERRSSRSPARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAGDAEEYGSXXXXXXXAPGDAGGTRGEALHPPARFAFYQLEDGQYAFMHPLSMRCLLEEHGLGGGCALPTALNAN---------ILEVETFRLSQDLRRRYAFLGHLPEHCSVMFVELDLANQLS-----------DQREDA-------------------------MLALRLATIDLDGPPPGASTAPLSP 585
BLAST of mRNA_H-elongata_contig657.14152.1 vs. uniprot
Match: A0A835ZED2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZED2_9STRA) HSP 1 Score: 103 bits (256), Expect = 7.840e-19 Identity = 167/462 (36.15%), Postives = 211/462 (45.67%), Query Frame = 3
Query: 1641 RHLRGEAYARCPLCFDNIHRNRLRRAMCEEVVPFKIGERASLLLLQRERASLTPRAIAITSGKSQGGDITAETKINPPRTVGDEGQEELRAGAACPKEGDDSERYSRLVTAKPSTLCRLAVEEQASLRRFRQDSITSGETEWIPFVSEAQALVDAQVQRFSAILTNLPAADGPGAAVAAAAARGIPPRQRQRQGQLLAPSVEEDQADRSASRGV-PRHYRRTRHEEAGADGRPSS--------------DDHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFRFFQSADGQRAFLHPLDMRQLLDDVDKGLPLPKRIDAQARSAPSAMI--VLEVETVKLSRELRRRLPFLGHLPLHCDIAFIEVDIADFVSADTADKFHEETDKREXXXXXXXXXXXXXAVKEAKGEKARAARIAAMRTFTVDLQGPKPGN 2975
+HL GE RCP CFD + R RL A A L RA RAGA ++ L+ K L + +E+A L FR+ S+ SG+TEW+P+V+EA AL+DA R +A++ LP A AAA G PR R + R+A+ GV P H+ A + XXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXX + F+Q DGQ FLHPL LL++ G + AR P ++ VLEVET +L+RELRRR FLGHLP HC I+F+E+D+ +S T DK+ + +R XXXXXXX R A +++RT TVDL GP PG+
Sbjct: 12 QHLGGEDSRRCPCCFDGVSRERLAPA-----------------------APLPLRA--------------------------------PRAGALA--------TFTLLLRDKRDLLLQRLEQEEAELLAFREASLASGDTEWLPYVTEACALLDA---RRAALVGALPHA---------AAAPGATPRARPK---------------RAATEGVSPPEVVAAAHKRAAPESCTGGFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPLVEAAPTGDTEREXXXXXXXXXXXXXXXXXXXRLPHYAFYQLEDGQCGFLHPLSFVSLLEEHCGG-----SAERAARGLPETLMARVLEVETFRLTRELRRRYAFLGHLPEHCSISFVELDLTQTLSQQTQDKYGADLQRRHKRRQAAXXXXXXXXXXXXXXXXXREALFSSLRTATVDLSGPPPGS 378
BLAST of mRNA_H-elongata_contig657.14152.1 vs. uniprot
Match: A0A8B7C3T7_PHODC (RING finger protein 10 n=1 Tax=Phoenix dactylifera TaxID=42345 RepID=A0A8B7C3T7_PHODC) HSP 1 Score: 90.5 bits (223), Expect = 1.380e-14 Identity = 101/435 (23.22%), Postives = 163/435 (37.47%), Query Frame = 3
Query: 1557 RCPICLQSPIAPRLTKCGHGPFCLVCILRHL-------RGEAYARCPLCFDNIHRNRLRRAMCEEVVPFKIGERASLLLLQRERASLTPRAIAITSGKSQGGDITAETKINPPRTVGDEGQEELRAGAACPKEGDDSERYSRLVTAKPSTLCRLAVEEQASLRRFRQDSITSGETEWIPFVSEAQALVDAQVQRFSAILTNLPAADGPGAAVAAAAARGIPPRQRQRQGQLLAPSVEEDQADRSASRGVPRHYRRTRHEEAGADGRPSSDDHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFRFFQSADGQRAFLHPLDMRQLLDDVDKGLPLPKRIDAQARSAPSAMIVLEVETVKLSRELRRRLPFLGHLPLHCDIAFIEVDIADFVSADTADKFHEETDKRE 2840
+CPICL+SP+ P++T CGH +C CILR+L +GE + +CPLCF I L + E V F++G+ AS LL R + SL P K+Q ++ C G + +S+ V L + + + D + E +P+V A ++ +++ + +T + P +A+ A + R + Q Q + D A A R +HE + G+ +D ++ F+Q+ DGQ LHPL+M+ LL LP RI + +LE+ETV + +RRR +L H L E+D++D + + F +E KRE
Sbjct: 245 QCPICLESPLCPQITSCGH-IYCFPCILRYLLMGEEDHKGECWKKCPLCFMMISTKDLYTILVENVKQFQVGDHASFTLLTRPKDSLVPTL------KNQ----------------------QVEGPMPCSSNGI-CDSFSKFVLTSDVELSVREAKSDLNNWLHKADCGLVDDLEILPYVCAALEQLEDRMKNWMERITY---SVSPSLRNSASPANNLKIRHNKTQPQAFNTTTSSDIAKSDAWESADRSTT-LKHEITDSSGKLGADS-----------------SPALLAAVPEAFENSEKVMLSYTEGKVLHQTSSSCKDAKQKESYTFYQAIDGQHLILHPLNMKCLLHHYGNYNMLPPRISGK---------ILELETVTQTEAMRRRYRYLSHFSLTTTFQLCEIDLSDILPPRSLAPFMDELKKRE 619
BLAST of mRNA_H-elongata_contig657.14152.1 vs. uniprot
Match: UPI00145909D4 (RING finger protein 10-like n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI00145909D4) HSP 1 Score: 90.5 bits (223), Expect = 1.400e-14 Identity = 108/451 (23.95%), Postives = 190/451 (42.13%), Query Frame = 3
Query: 1536 VDGDDEWRCPICLQSPIAPRLTKCGHGPFCLVCILRHLR-GE-AYARCPLCFDNIHRNRLRRAMCEEVVPFKIGERASLLLLQRERASLTPRAIAITSGKSQGGDITAETKINPPRTVGDEGQEELRAGAACPKEGDDSERYSRLVTAKPSTLC-RLAVEEQASLRRFRQDSITSGETEWIPFVSEAQALVDAQVQRFSAILTNLPAADGPGAAVAAAAARGIPPRQRQRQGQLL--APSVEEDQA------DRSASRGVPRHYRRTRHEEAGADGR----PSSD-DHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFRFFQSADGQRAFLHPLDMRQLLDDVDKGLPLPKRIDAQARSAPSAMIVLEVETVKLSRELRRRLPFLGHLPLHCDIAFIEVDIADFV-SADTADKFHEETDKR 2837
V ++ CPICLQ+PIA ++T+CGH +C CIL +L GE + +CP+C+++IH LR +EV +K+GE +L L++R++ G++ A K + +G ++ D RY +++ A + R+ + E+ +L + D+ E +PF+ A A++ A+ + +++ + + + P Q ++ ++ A S EED+ +RS+S G + + H E + G PS D ++ AF F+Q+ DGQ ++H L+ R L+ + P I A ++E+E + ++ +LR+RL +LGHLPL C+ E+ I V S DT F E+ +KR
Sbjct: 181 VQSSEKSSCPICLQAPIAAKMTRCGH-IYCWACILHYLALGEKTWRKCPICYESIHDKDLRSVESKEVHQYKVGETITLRLMRRQK-----------------GNVYALPKFCKDKELGK---------FFSVQDSDQKTRYMKILLASEEEIRKRVLLVERTALETQKVDA----EDSEMPFIDGALAMLKAREEINQGMMSAKVKTSKARKSESESIETPEKPSQDKKATKIYKSAFSDEEDETADEENKERSSSDGSLESPKGSPHSEKRSSGSSMDIPSVDVSNNSVLQVLPEMSGSPENPCTALAPGVLADTMPAEEAAEHLEMPAHPDVVSPSSRDSVDNAFYFYQAEDGQHIYMHALNARCLVKEYGALQHCPDTITAT---------IVEMENIFMTEDLRKRLRYLGHLPLTCEFQVAELAIKPPVLSKDTLKFFSEDIEKR 591
BLAST of mRNA_H-elongata_contig657.14152.1 vs. uniprot
Match: A0A6I9RX37_ELAGV (RING finger protein 10 n=1 Tax=Elaeis guineensis var. tenera TaxID=51953 RepID=A0A6I9RX37_ELAGV) HSP 1 Score: 87.0 bits (214), Expect = 1.620e-13 Identity = 102/438 (23.29%), Postives = 164/438 (37.44%), Query Frame = 3
Query: 1557 RCPICLQSPIAPRLTKCGHGPFCLVCILRHL-------RGEAYARCPLCFDNIHRNRLRRAMCEEVVPFKIGERASLLLLQRERASLTPRAIAITSGKSQGGDITAETKINPPRTVGDEGQEELRAGAACPKEGDDSERYSRLVTAKPSTLCRLAVEEQASLRRFRQDSITSGETEWIPFVSEAQALVDAQVQRFSAILTNLPAADGPGAAVAAAAARGIPPRQRQRQGQLLAPSVEEDQAD--RSASRGVPRHYRRTRHE-EAGADGRPSSDDHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFRFFQSADGQRAFLHPLDMRQLLDDVDKGLPLPKRIDAQARSAPSAMIVLEVETVKLSRELRRRLPFLGHLPLHCDIAFIEVDIADFVSADTADKFHEETDKRE 2840
+CPICL+SP+ P++T CGH +C CILR+L RGE + +CPLCF I L + E V F+ G+ A LL R + SL P I +I EG + C + +S+ V L + + + D + E +P+V A ++ +++ + +T P +A+ A + R + Q Q S + D+ D S R + + T ++GAD P ++ F+Q+ DGQ LHPL+M+ LL+ LP R+ + +LE+ETV + +R+R +L H L E+D++D + + F +E KRE
Sbjct: 244 QCPICLESPLCPQITSCGH-IYCFPCILRYLLMGEEDHRGECWKKCPLCFMMISTKDLYTILVENVKQFQAGDHAYFTLLTRPKYSLVP--------------ILKNQQI--------EGTMPCSSDGIC-------DSFSKFVLTSDVELSVREAKSDLNNWLHKADCGLVDDLEILPYVCAALEHLEDRMKNWMERITYN---GSPSLRNSASPAHNLKIRHNKAQPQAFNTSSDIDKLDAWESTGRSITLEHGITESSVKSGADSSP-----------------------FPLAAVPEAFENSEKVMLSYIDGKALHQTSSSCRGAKQKESYTFYQAIDGQHLILHPLNMKCLLNHYGSYDMLPPRLSGK---------ILELETVTQTEAMRKRYRYLSHFSLTTTFQLCEIDLSDILPPGSLAPFMDELKKRE 616
BLAST of mRNA_H-elongata_contig657.14152.1 vs. uniprot
Match: W4H9W9_9STRA (RING-type domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H9W9_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 4.120e-13 Identity = 99/442 (22.40%), Postives = 160/442 (36.20%), Query Frame = 3
Query: 1527 DGDVDGDDEWRCPICLQSPIAPRLTKCGHGPFCLVCILRHLR--GEAYARCPLCFDNIHRNRLRRAMCEE--VVPFKIGERASLLLLQRERASLTPRAIAITSGKSQGGDITAETKINPPRTVGDEGQEELRAGAACPKEGDDSERYSRLVTAKPSTLCRLAVEEQASLRRFRQDSITSGETEWIPFVSEAQALVDAQVQRFSAILTNLPAADGPGAAVAAAAARGIPPRQRQRQGQLLAPSVEEDQ-ADRSASRGVPRHYRRTRHEEAGADGRPSSDDHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFRFFQSADGQRAFLHPLDMRQLLDDVDKGLPLPKRIDAQARSAPSAMIVLEVETVKLSRELRRRLPFLGHLPLHCDIAFIEVDIADFVSADTADKFHEETDKR 2837
D VD D RCPICL + AP++T+CGH +C CIL +L + RCP+CFD + ++ LR + + +P +G A+ + R R S P A + S TK + P+ G P + +SR++ + PS L + E L ++ +SG+ +P + EA A + ++ + L PS D+ + ++ + + HEE A + F+Q +G A LHPL +R L + P I A VLE+E + ++ ++RRR ++ HLP HCD+ +EVD++ VS T F+ + KR
Sbjct: 102 DATVDAD--HRCPICLDTLRAPKITRCGHA-YCWHCILTYLSLTENYWRRCPMCFDAVKKHDLRSVLIDRHRTIP-SVGSSATFRYVHRGRGSWFPHLPAPQAAPSS-------TKNHHPQQKG-----------GIPSVHGANAVFSRILESTPSYLESMIQSETEDLDALAAEAKSSGDDHALPVIQEALAYCEKRLAK------------------------------------LRGPSTAPDEPVPTTTAKATKKTSSPSEHEEEEA-------------------------------------------------------------------PYSFYQLDNGHAAILHPLCLRALTREFGSTHSFPHTITAT---------VLEIEHMVVTDDVRRRFRYMAHLPSHCDLFLVEVDLSPVVSPATYSHFYSDIKKR 409
BLAST of mRNA_H-elongata_contig657.14152.1 vs. uniprot
Match: W4HC13_9STRA (RING-type domain-containing protein n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=W4HC13_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 4.260e-13 Identity = 99/442 (22.40%), Postives = 160/442 (36.20%), Query Frame = 3
Query: 1527 DGDVDGDDEWRCPICLQSPIAPRLTKCGHGPFCLVCILRHLR--GEAYARCPLCFDNIHRNRLRRAMCEE--VVPFKIGERASLLLLQRERASLTPRAIAITSGKSQGGDITAETKINPPRTVGDEGQEELRAGAACPKEGDDSERYSRLVTAKPSTLCRLAVEEQASLRRFRQDSITSGETEWIPFVSEAQALVDAQVQRFSAILTNLPAADGPGAAVAAAAARGIPPRQRQRQGQLLAPSVEEDQ-ADRSASRGVPRHYRRTRHEEAGADGRPSSDDHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFRFFQSADGQRAFLHPLDMRQLLDDVDKGLPLPKRIDAQARSAPSAMIVLEVETVKLSRELRRRLPFLGHLPLHCDIAFIEVDIADFVSADTADKFHEETDKR 2837
D VD D RCPICL + AP++T+CGH +C CIL +L + RCP+CFD + ++ LR + + +P +G A+ + R R S P A + S TK + P+ G P + +SR++ + PS L + E L ++ +SG+ +P + EA A + ++ + L PS D+ + ++ + + HEE A + F+Q +G A LHPL +R L + P I A VLE+E + ++ ++RRR ++ HLP HCD+ +EVD++ VS T F+ + KR
Sbjct: 112 DATVDAD--HRCPICLDTLRAPKITRCGHA-YCWHCILTYLSLTENYWRRCPMCFDAVKKHDLRSVLIDRHRTIP-SVGSSATFRYVHRGRGSWFPHLPAPQAAPSS-------TKNHHPQQKG-----------GIPSVHGANAVFSRILESTPSYLESMIQSETEDLDALAAEAKSSGDDHALPVIQEALAYCEKRLAK------------------------------------LRGPSTAPDEPVPTTTAKATKKTSSPSEHEEEEA-------------------------------------------------------------------PYSFYQLDNGHAAILHPLCLRALTREFGSTHSFPHTITAT---------VLEIEHMVVTDDVRRRFRYMAHLPSHCDLFLVEVDLSPVVSPATYSHFYSDIKKR 419
BLAST of mRNA_H-elongata_contig657.14152.1 vs. uniprot
Match: A0A418EWD5_9STRA (RING-type domain-containing protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418EWD5_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 4.400e-13 Identity = 99/441 (22.45%), Postives = 162/441 (36.73%), Query Frame = 3
Query: 1527 DGDVDGDDEWRCPICLQSPIAPRLTKCGHGPFCLVCILRHLR--GEAYARCPLCFDNIHRNRLRRAMCEE--VVPFKIGERASLLLLQRERASLTPRAIAITSGKSQGGDITAETKINPPRTVGDEGQEELRAGAACPKEGDDSERYSRLVTAKPSTLCRLAVEEQASLRRFRQDSITSGETEWIPFVSEAQALVDAQVQRFSAILTNLPAADGPGAAVAAAAARGIPPRQRQRQGQLLAPSVEEDQADRSASRGVPRHYRRTRHEEAGADGRPSSDDHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFRFFQSADGQRAFLHPLDMRQLLDDVDKGLPLPKRIDAQARSAPSAMIVLEVETVKLSRELRRRLPFLGHLPLHCDIAFIEVDIADFVSADTADKFHEETDKR 2837
D VD D RCPICL + AP++T+CGH +C CIL +L + RCP+CFD + ++ LR + + +P +G A+ + R R S P A + S TK P+ G P + +SR++ + PS L + E+ L ++ +SG+ +P + EA A + ++ + +G AP ++ A + ++ + + HEE A + F+Q +G A LHPL +R L + P I A VLE+E + ++ ++RRR ++ HLP HCD+ +EVD++ VS T F+ + KR
Sbjct: 103 DATVDAD--HRCPICLDTLRAPKITRCGHA-YCWHCILTYLSLTENYWRRCPMCFDAVKKHDLRSVLIDRHRTIP-SVGSSATFRYIHRGRGSWFPHLPAPQAAPSS-------TKNYHPQQKG-----------GIPSVHGANAVFSRILESTPSYLESMIQSEKEDLDALAAEAQSSGDDHALPVIQEALAYCEKRLAKL--------------------------------RGSSTAP---DEPAPMTTAKATKKTSSPSEHEEEEA-------------------------------------------------------------------PYSFYQLDNGHAAILHPLCLRALTREFGSTHSFPHTITAT---------VLEIEHMVVTDDVRRRFRYMAHLPSHCDLFLVEVDLSPVVSPATYSHFYSDIKKR 410 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig657.14152.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig657.14152.1 >prot_H-elongata_contig657.14152.1 ID=prot_H-elongata_contig657.14152.1|Name=mRNA_H-elongata_contig657.14152.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=1211bp MVRGSNGKLDPSAPVFRVRPSLSSDHLQHQQQPQQQQGHEQRQGLGDVDVback to top mRNA from alignment at H-elongata_contig657:1349..8965+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig657.14152.1 ID=mRNA_H-elongata_contig657.14152.1|Name=mRNA_H-elongata_contig657.14152.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=7617bp|location=Sequence derived from alignment at H-elongata_contig657:1349..8965+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig657:1349..8965+ >mRNA_H-elongata_contig657.14152.1 ID=mRNA_H-elongata_contig657.14152.1|Name=mRNA_H-elongata_contig657.14152.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=7266bp|location=Sequence derived from alignment at H-elongata_contig657:1349..8965+ (Himanthalia elongata Himel1 dioecious)back to top |