mRNA_H-elongata_contig65676.14149.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig65676.14149.1
Unique NamemRNA_H-elongata_contig65676.14149.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig65676.14149.1 vs. uniprot
Match: D7FP90_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP90_ECTSI)

HSP 1 Score: 531 bits (1369), Expect = 1.950e-187
Identity = 240/332 (72.29%), Postives = 289/332 (87.05%), Query Frame = 1
Query:    1 CLNDLHVFDLERHHWAEVKVRGDAPLTRASFGMCAGPIPGTIIVAGGTGVEVDSLRADVIEFNVPSQTWTGVLRDSERTPCRLYGQSMCSYGDNVLLFGGSTGLHYTNDLFEYNIQTSKWRRLATSGWRPSPRYKHQTVVVEDKLYVIGGGSFTPEQNNIDVYCLNLKTLVWEEVCMKGELPKACVAHTCSFDAETDTIFLWGGFTSDLSRVQAFFGFHCPTATWVKMKDQSVQAPVAGGASDLANQPPARSFHSAAFFRGALYVFSGANGHVRYSDVWRFQIRSTPPTLAFLAAKKLRSGRMGNPLQGMELMVPEELVEGINHMNEHAERM 996
            CLND++VF+LE H W++V V+GDAPL RASFGMCAGP PGT+IVAGGTGVE+DSLRADV+E+NVP++TWT +L DSE TPC+ YGQS+C+YGDN+LLFGGSTGLHYTNDLFEYN++T+KW+RL TSG  PSPRYKHQ VVV  K+YVIGGG F PEQ+ ID+YCL+L++LVWEE  MKGELPKA VAH+CSFDAETDTI+LWGGFTS+LSR+Q FFGFHCPTATWV+M ++  QAPVAGGA+DL   PPAR+FHSAAFF+G LYVFSGANG VRYSDVWRFQ+RSTPP+L+ L A K++SG    PL+ M++  P ELV+G+  MNEHA+R+
Sbjct:   77 CLNDVYVFNLELHRWSKVTVKGDAPLPRASFGMCAGPAPGTLIVAGGTGVEMDSLRADVVEYNVPNRTWTQILTDSEETPCKFYGQSVCTYGDNLLLFGGSTGLHYTNDLFEYNVRTNKWKRLVTSGRMPSPRYKHQAVVVGHKMYVIGGGCFKPEQSGIDLYCLDLRSLVWEETTMKGELPKARVAHSCSFDAETDTIYLWGGFTSELSRLQDFFGFHCPTATWVRMAEEPTQAPVAGGATDLVGAPPARAFHSAAFFQGGLYVFSGANGDVRYSDVWRFQVRSTPPSLSMLVAHKIKSGGEA-PLKEMDMRAPAELVQGVREMNEHADRL 407          
BLAST of mRNA_H-elongata_contig65676.14149.1 vs. uniprot
Match: D7FP81_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP81_ECTSI)

HSP 1 Score: 424 bits (1089), Expect = 4.600e-145
Identity = 201/336 (59.82%), Postives = 256/336 (76.19%), Query Frame = 1
Query:    1 CLNDLHVFDLERHHWAEVKVRGDAPLTRASFGMCAGPIPGTIIVAGGTGVEVDSLRADVIEFNVPSQTWTGVLRDSERTPCRLYGQSMCSYGDNVLLFGGSTGLHYTNDLFEYNIQTSKWRRLATSGWRPSPRYKHQTVVVEDKLYVIGGGSFTPEQNNIDVYCLNLKTLVWE--EVCMKGELPKACVAHTCSFDAETDTIFLWGGFTSDLSRVQAFFGFHCPTATWVKMKDQSVQAPVAGGASDLANQPPARSFHSAAFFRGALYVFSGANGHVRYSDVWRFQIRSTPPTLAFLAAKKL--RSGRMGNPLQGMELMVPEELVEGINHMNEHAERM 996
            CLND++VFDL+ H W     +GD+   RASFGMC GP PGT+IVAGGTGVE+DSLRADV+E+N  ++TWT VL DSE TPC+ YGQS+C+YGDN+LLFGGSTGLHY+NDLFEYN+ +++WR+L T+G +PSPRYKHQ V V DK+YVIGGG F PEQ++ID+YCL+LKTLVWE  E  MKG+LPKA VAH+CSFD     I+LWGGFT +LSR+  F+ ++C +A W ++  +       G AS     PPAR+FHSA F  GALY+FSGANG +RY+DVWR+Q+R +PP+LA LA+K L   SG   N     +  VP+E++EG+ HMNE+AE M
Sbjct:   72 CLNDMYVFDLQLHRWERAVPKGDSIHARASFGMCQGPTPGTVIVAGGTGVEMDSLRADVVEYNTRTRTWTSVLTDSEETPCKFYGQSVCTYGDNLLLFGGSTGLHYSNDLFEYNVCSNRWRKLTTTGRKPSPRYKHQAVAVGDKMYVIGGGCFKPEQSSIDLYCLDLKTLVWEMDETEMKGDLPKARVAHSCSFDPVGGDIYLWGGFTGELSRLADFYVYNCKSACWRRLVMEG------GDAS-----PPARAFHSAVFHDGALYLFSGANGDIRYNDVWRYQVRGSPPSLAVLASKVLLEESGLNTNLELKFKNKVPDEVIEGVKHMNEYAECM 396          
BLAST of mRNA_H-elongata_contig65676.14149.1 vs. uniprot
Match: A0A836CQE2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQE2_9STRA)

HSP 1 Score: 393 bits (1010), Expect = 6.460e-133
Identity = 193/337 (57.27%), Postives = 241/337 (71.51%), Query Frame = 1
Query:    1 CLNDLHVFDLERHHWAEVKVRGDA-PLTRASFGMCAGPIPGTIIVAGGTGVEVDSLRADVIEFNVPSQTWTGVLRDSERTPCRLYGQSMCSYGDNVLLFGGSTGLHYTNDLFEYNIQTSKWRRLATSGWRPSPRYKHQTVVVEDKLYVIGGGSFTPEQNNIDVYCLNLKTLVWEEVCMKGELPKACVAHTCSFDAETDTIFLWGGFTSDLSRVQAFFGFHCPTATWVKMKDQSVQA--PVAGGASDLANQPP-ARSFHSAAFFRGALYVFSGANGHVRYSDVWRFQIRSTPPTLAFLAAKKLRSGRMG-NPLQGMELMVPEELVEGINHMNEHAERM 996
            CLND++ FDL+ H W  V  +GD+ P  RASFGMCAGP   TIIVAGGTGVE+DSLR+DV+EF+  ++ W+ +  D E  P R YGQ++C YG  +LLFGGSTGLHYTNDLFEYN+ T+ WR+LAT+G RPSPRYKHQ VVV D +YVIGGG F PEQ  ID+Y L+L+TLVW+   M GE+P+A VAH+CSFD  T TI+LWGGFT +LSR+Q FF +    A W ++K     A  P A          P AR+FHSA F  GALYVFSGANG VRY+DVWRF++RSTPP L  LAA+ L   R G   +  +E  VP+E+++G+ +MNE A R+
Sbjct:   70 CLNDMYTFDLDSHRWETVTAKGDSVPSARASFGMCAGPAANTIIVAGGTGVEMDSLRSDVLEFDTRTKLWSKITGDGEDAPSRFYGQTVCRYGSVLLLFGGSTGLHYTNDLFEYNMTTNCWRKLATTGKRPSPRYKHQAVVVGDAMYVIGGGCFKPEQAAIDLYRLDLRTLVWDTPAMGGEVPRARVAHSCSFDPATSTIYLWGGFTGELSRLQDFFAYDTARAEWAEIKTPPADAAAPSAXXXXXXXXXXPYARAFHSAVFHDGALYVFSGANGDVRYNDVWRFKVRSTPPALGVLAARALLHTRSGVQHMMCLETFVPQEVLDGVLNMNESAGRL 406          
BLAST of mRNA_H-elongata_contig65676.14149.1 vs. uniprot
Match: A0A836CEB6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEB6_9STRA)

HSP 1 Score: 384 bits (986), Expect = 3.310e-129
Identity = 184/348 (52.87%), Postives = 239/348 (68.68%), Query Frame = 1
Query:    1 CLNDLHVFDLERHHWAEVKVRGDAPLTRASFGMCAGPIPG-TIIVAGGTGVEVDSLRADVIEFNVPSQTWTGVLRDSERTPCRLYGQSMCSYGDNVLLFGGSTGLHYTNDLFEYNIQTSKWRRLATSGWRPSPRYKHQTVVVEDKLYVIGGGSFTPEQNNIDVYCLNLKTLVWEEVCMKGELPKACVAHTCSFDAETDTIFLWGGFTSDLSRVQAFFGFHCPTATWVKMKDQSVQAPVAGGASDLANQ------PPARSFHSAAFFRGALYVFSGANGHVRYSDVWRFQIRSTPPTLAFLAAKKLRSGRMGNPLQGMELM------------VPEELVEGINHMNEHA 987
            CLND++ FDL+ H W  V V G+ PL RASFGMCA P P  +I+VAGGTGVE+DSLRAD++EF+  ++ W  V+ DSE TPCR YGQS+C+YG+++LLFGGSTG+HYTNDL+EYN  T +WR+L T+G +P+PRYKHQ V+V   +YVIGGG F PEQ+ IDV+ L+L TL W+EV   G++PK+ VAH+C +DA T TIFLWGGFTS+LSR+Q F+  HC TATW +       A V+G              PPAR+FH+A FF  ALYVFSGANG VRYSDVWR+Q  ++PP+L  LAA+ +R+                         +P E+ + + H N+HA
Sbjct:   61 CLNDVYTFDLDTHQWNAVAVNGEPPLPRASFGMCARPSPHRSIVVAGGTGVEMDSLRADIVEFDTRTRAWRRVVTDSEETPCRFYGQSLCTYGESLLLFGGSTGMHYTNDLYEYNTTTQRWRKLTTTGRKPTPRYKHQAVIVGASMYVIGGGCFKPEQSTIDVHRLDLATLAWDEVATSGDVPKSRVAHSCCYDAGTGTIFLWGGFTSELSRLQDFYTLHCETATW-RAAAALAPAVVSGVVXXXXXXXXXXXLPPARAFHAACFFEDALYVFSGANGDVRYSDVWRYQACASPPSLGVLAARLVRAAXXXXXXXXXXXXXXXXXXXRHKRHLPSEVADAVLHFNQHA 407          
BLAST of mRNA_H-elongata_contig65676.14149.1 vs. uniprot
Match: A0A835ZFC9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFC9_9STRA)

HSP 1 Score: 382 bits (981), Expect = 2.310e-128
Identity = 180/343 (52.48%), Postives = 239/343 (69.68%), Query Frame = 1
Query:    1 CLNDLHVFDLERHHWAEVKVRGDA-PLTRASFGMCAGPIPGTIIVAGGTGVEVDSLRADVIEFNVPSQTWTGVLRDSERTPCRLYGQSMCSYGDNVLLFGGSTGLHYTNDLFEYNIQTSKWRRLATSGWRPSPRYKHQTVVVEDKLYVIGGGSFTPEQNNIDVYCLNLKTLVWEEVCMKGELPKACVAHTCSFDAETDTIFLWGGFTSDLSRVQAFFGFHCPTATWVKMKDQSVQAPVAGGASDLANQ---------PPARSFHSAAFFRGALYVFSGANGHVRYSDVWRFQIRSTPPTLAFLAAKKLRSGRMG-NPLQGMELMVPEELVEGINHMNEHAERM 996
            CLND++ FDL+RH W  +  RG+  P  RASF MC+GP   T+IVAGGTGVE+DSLR+D+++F+  ++ W  + RD +  P + YGQ++C YGD +LLFGGSTGLHYTNDLFEYN+ T+ WR+L T G RPSPRYKHQ VVV D +YVIGGG F PEQ+ ID+YCLNL+TLVW +    G +P+A VAH+CSFD ET TI+LWGGFT +LSR+Q F+ +H PT  W +++                           P AR+FHSA F++GALYVFSGANG VRY+DVWR+++RS+PP L  LA + L   R+G   +  +E ++P E+++ +  MNE A R+
Sbjct:   75 CLNDMYTFDLDRHVWELIPHRGEEMPTARASFAMCSGPDEKTLIVAGGTGVEMDSLRSDILQFDTRTRRWIKLHRDGDDAPSKFYGQTVCRYGDVLLLFGGSTGLHYTNDLFEYNVVTNCWRKLVTQGRRPSPRYKHQAVVVGDFMYVIGGGCFKPEQSAIDMYCLNLRTLVWAQPRSAGAVPRARVAHSCSFDPETCTIYLWGGFTGELSRLQDFYAYHAPTGEWTEIRTAPPXXXXXXXXXXXXXXXXXXXXXVAPYARAFHSAVFYKGALYVFSGANGDVRYNDVWRYRMRSSPPALGVLAGRALLHSRLGVQQMMALEALLPHEVLDAVLTMNESASRL 417          
BLAST of mRNA_H-elongata_contig65676.14149.1 vs. uniprot
Match: A0A835Z314_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z314_9STRA)

HSP 1 Score: 257 bits (656), Expect = 1.760e-79
Identity = 131/301 (43.52%), Postives = 176/301 (58.47%), Query Frame = 1
Query:    1 CLNDLHVFDLERHHWAEVKVRGDAPLTRASFGMCAGPIPG-TIIVAGGTGVEVDSLRADVIEFNVPSQTWTGVLRDSERTPCRLYGQSMCSYGDNVLLFGGSTGLHYTNDLFEYNIQTSKWRRLATSGWRPSPRYKHQTVVVEDKLYVIGGGSFTPEQNNIDVYCLNLKTLVWEEVCMKGELPKACVAHTCSFDAETDTIFLWGGFTSDLSRVQAFFGFHCPTATWVKMKDQSVQAPVAGGASDLANQPPARSFHSAAFFRGALYVFSGANGHVRYSDVWRFQIRSTPPTLAFLAAKKLRS 900
             LND + F+LE H W  VKV  + P  R+SF MCA P    +I VAGGTG + DSL  D++EF+  ++TW+ V+ D   TP  LYGQS C+YG +++LFGG++GL Y N                                          G+F P+ + +DVYCLNL TLVW+ V   GE P++ VAHTCSFD  TDTI +WGGF+S L R+Q F   HC TATW                ++ +NQPP R+FH+A F +GALY+F GA+G  RY+DVWR+ +R +PP+L  LAA++LR+
Sbjct:   64 ALNDAYSFNLETHQWQLVKVNSEPPTARSSFSMCAPPDGSRSIFVAGGTGADPDSLCHDIVEFDTHARTWSRVV-DVGDTPWILYGQSQCAYGGSLILFGGTSGLEYVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAFMPQYSVVDVYCLNLITLVWKAVNTSGEAPQSRVAHTCSFDGATDTILMWGGFSSTLHRLQDFHILHCSTATWT---------------TETSNQPPPRAFHAACFHKGALYLFCGADGDNRYNDVWRYTVRESPPSLGVLAARQLRA 348          
BLAST of mRNA_H-elongata_contig65676.14149.1 vs. uniprot
Match: A0A7S2XVZ9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVZ9_9STRA)

HSP 1 Score: 256 bits (653), Expect = 4.690e-79
Identity = 132/336 (39.29%), Postives = 190/336 (56.55%), Query Frame = 1
Query:    1 CLNDLHVFDLERHHWAEVKVRGDAPLTRASFGMCAGPIPGTIIVAGGTGVEVDSLRADVIEFNVPSQTWTGVLRDSERTPCRLYGQSMCSYGDNVLLFGGSTGLHYTNDLFEYNIQTSKWRRLATSGWRPSPRYKHQTVVVEDKLYVIGGGSFTPEQNNIDVYCLNLKTLVWEEVCMKGELPKACVAHTCSFDAETDTIFLWGGFTSDLSRVQAFFGFHCPTATWVKMKDQSVQAPVAGGASDLANQPPA-RSFHSAAFFRGALYVFSGANGHVRYSDVWRFQIRSTPPTLAFLAAKKLRSGRMGNPL--QGMELMVPEELVEGINHMNEHAERML 999
            CL+D  VFD     W+ V+ RG+ P  RASFGM  GP PGT+IVAGGTG ++D+  +D+ E+N+ S TW  +++  +   C+ YGQS+C Y  N+  FGGS G  Y+N L+ Y+    +   + T+G  P PRYK Q +VV+D L VIGGG++ P  + IDV+ L+L TL W +    G +P+  VAHTC++D  T  I+LWGGF   L R+  F      T  W  +               L NQ P  R+FH +    G+ Y+F GA+G  R+SDVWRF+   TPP+L  + A  +   +       + +   +P E+++GI  M   AER +
Sbjct:   74 CLSDFLVFDFSTQSWSAVQTRGEPPHARASFGMSRGPDPGTLIVAGGTGQDMDTF-SDIYEYNISSSTWRLLIKGEKANFCKYYGQSICEYKGNLFFFGGSRGRTYSNVLYRYDCAQEEGAAVPTTGKAPCPRYKQQMMVVKDSLLVIGGGNYRPPTHQIDVHELDLLTLNWSQWKTSGNVPQGRVAHTCTYDENTHQIYLWGGFNVVLHRLNDFHVLDIATRKWSTI-------------ISLDNQSPRPRAFHCSCLHDGSFYIFGGADGDFRHSDVWRFRTNVTPPSLMSICAGTVAKSQSPKTAADETISQSLPHEVLDGIKQMVCGAERFV 395          
BLAST of mRNA_H-elongata_contig65676.14149.1 vs. uniprot
Match: A0A7S2V473_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V473_9STRA)

HSP 1 Score: 229 bits (584), Expect = 1.790e-69
Identity = 112/274 (40.88%), Postives = 159/274 (58.03%), Query Frame = 1
Query:  178 IEFNVPSQTWTGVLRDSERTP---CRLYGQSMCSYGDNVLLFGGSTGLHYTNDLFEYNIQTSKWRRLATSGWRPSPRYKHQTVVVEDKLYVIGGGSFTPEQNNIDVYCLNLKTLVWEEVCMKGELPKACVAHTCSFDAETDTIFLWGGFTSDLSRVQAFFGFHCPTATWVKMKDQSVQAPVAGGASDLANQPPARSFHSAAFFRGALYVFSGANGHVRYSDVWRFQIRSTPPTLAFLAAKKLRSGRMGNPLQGMELMVPEELVEGINHMNEHAE 990
            +E+N+ S+TW  +   S   P   C+LYGQS+C+YG  +L FGGSTG  Y+NDL+E+   T  W +  T+G  PSPRYKHQ V+V D +Y+ GGG   P    + VY LNLK+  WE V  KG++P+  VAHTC  D  T  IFLWGGFTS L R+Q  +     +  W             G  S    +P  R+FH++  + G++++F GANG  R+SD+W +QIR TPP+L  LAAK +            +  VP E+++G++   E ++
Sbjct:    1 MEYNIYSRTWRVLHSSSVSEPGTCCQLYGQSVCAYGSKLLFFGGSTGKSYSNDLYEFCTITHSWNKWETTGDIPSPRYKHQCVIVNDTMYLFGGGDCKPSSGGLQVYALNLKSKNWEVVQSKGKIPQDRVAHTCVLDENTGQIFLWGGFTSSLERLQDLYVLDFGSMKW-------------GSISTPKEKPSCRAFHASCIYNGSMFIFGGANGERRHSDIWEYQIRYTPPSLMALAAKAIAKMPAVAENGDNKYSVPPEVLDGLDRAEEGSD 261          
BLAST of mRNA_H-elongata_contig65676.14149.1 vs. uniprot
Match: A0A6U1QKS6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1QKS6_9STRA)

HSP 1 Score: 216 bits (551), Expect = 3.310e-65
Identity = 109/290 (37.59%), Postives = 165/290 (56.90%), Query Frame = 1
Query:   28 LERHHWAEVKVRGDAPLTRASFGMCAGPIPGTIIVAGGTGVEVDSLRADVIEFNVPSQTWTGV-LRDSERTPCRLYGQSMCSYGDNVLLFGGSTGLHYTNDLFEYNIQTSKWRRLATSGWRPSPRYKHQTVVVEDKLYVIGGGSFTPEQNNIDVYCLNLKTLVWEEVCMKGELPKACVAHTCSFDAETDTIFLWGGFTSDLSRVQAFFGFHCPTATWVKMKDQSVQAPVAGGASDLANQPPARSFHSAAFFRGALYVFSGANGHVRYSDVWRFQIRSTPPTLAFLAAKKL 894
            +E   W  VKV G+ P  RAS  MC G   GT IV GG   + +S   D  EFNV  + W  + L ++      +YG + C + ++++ FGG++G  + ND+   N+ T K+  ++T+G  PSPRYKHQ+ +V + +YVIGGG+FT     IDV+CL+L T  W ++   G+LP + VAH+ ++D  + +IFLWGG     +R Q F+ F+  T TW ++              D A+ PP R+FH++ F+ G+ Y+F G+N +   SD W F  R TPP L  + A  +
Sbjct:    1 METSSWRVVKVYGEGPSPRASCTMCPGVHDGTFIVYGG---QTESDVRDAYEFNVHDRRWRKLHLENAPPHLGSIYGHTTCLHKESLIFFGGTSGNSFWNDICSLNLFTMKYEAISTTGDAPSPRYKHQSQIVGNMMYVIGGGTFTTCSKEIDVFCLDLSTYTWMKISALGDLPPSRVAHSTAYDEHSRSIFLWGGNDGSKNRFQDFYTFNIDTCTWKEISQ------------DSAHLPPPRAFHTSCFYEGSFYIFGGSNNNAFLSDAWYFPTRVTPPRLTTILANMI 275          
BLAST of mRNA_H-elongata_contig65676.14149.1 vs. uniprot
Match: A0A7S2XUR3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUR3_9STRA)

HSP 1 Score: 216 bits (550), Expect = 3.780e-65
Identity = 103/278 (37.05%), Postives = 171/278 (61.51%), Query Frame = 1
Query:  157 DSLRADVIEFNVPSQTWTGVLRDSERTPCRLYGQSMCSYGDNVLLFGGSTGLHYTNDLFEYNIQTSKWRRLATSGWRPSPRYKHQTVVVEDKLYVIGGGSFTPEQNNIDVYCLNLKTLVWEEVCMKGELPKACVAHTCSFDAETDTIFLWGGFTSDLSRVQAFFGFHCPTATWVKMKDQSVQAPVAGGASDLANQPPARSFHSAAFFRGALYVFSGANGHVRYSDVWRFQIRSTPPTLAFLAAKKLRSGRMGNPLQGMELMVPEELVEGINHMNEHAE 990
            + L +D+ EF+  S+TW    R +    CRLYGQS CS+   ++ FGGS+G  Y+N+   ++++  KW +++T+G +P+PRYKHQ VVV   ++++GGG++ P ++ +DV+ LNLKTL W+EV   G  P+A VAHTC +D  ++TI++WGGF   L R++ F+     T  W  +   +               P AR+FH++    G+LY+F GA+GH R++DVW++Q     P+L  LAA+ + + ++ +       ++P+E+V+GI  +N  A+
Sbjct:    2 EELCSDLFEFSTLSRTWR---RLASSAFCRLYGQSCCSFESKLIFFGGSSGKQYSNETVFFDVKQMKWEKISTTGPKPTPRYKHQAVVVGHSMFILGGGNYRPARDKMDVHMLNLKTLEWQEVKCTGMPPEARVAHTCQYDPLSNTIYVWGGFNGRLVRLKDFYALDLGTMKWDSIHCST-------------GCPSARAFHASCLCEGSLYIFGGADGHKRHADVWKYQFHLRIPSLMVLAAQSVVN-KVSDVRDTYGDILPDEVVDGIEKINIGAD 262          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig65676.14149.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FP90_ECTSI1.950e-18772.29Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FP81_ECTSI4.600e-14559.82Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CQE2_9STRA6.460e-13357.27Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CEB6_9STRA3.310e-12952.87Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZFC9_9STRA2.310e-12852.48Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z314_9STRA1.760e-7943.52Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2XVZ9_9STRA4.690e-7939.29Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2V473_9STRA1.790e-6940.88Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6U1QKS6_9STRA3.310e-6537.59Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2XUR3_9STRA3.780e-6537.05Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig65676contigH-elongata_contig65676:2145..3149 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score531.6
Seed ortholog evalue2.7e-148
Seed eggNOG ortholog2880.D7FP90
KEGG koko:K20285
EggNOG free text desc.nitrile biosynthetic process
EggNOG OGsKOG0379@1,KOG0379@2759
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Hectar predicted targeting categoryother localisation
Exons1
Model size1005
Cds size1005
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931043.5528653-CDS-H-elongata_contig65676:2144..31491622931043.5528653-CDS-H-elongata_contig65676:2144..3149Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig65676 2145..3149 +
1691679674.604828-CDS-H-elongata_contig65676:2144..31491691679674.604828-CDS-H-elongata_contig65676:2144..3149Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig65676 2145..3149 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig65676.14149.1prot_H-elongata_contig65676.14149.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig65676 2145..3149 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig65676.14149.1

>prot_H-elongata_contig65676.14149.1 ID=prot_H-elongata_contig65676.14149.1|Name=mRNA_H-elongata_contig65676.14149.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=335bp
CLNDLHVFDLERHHWAEVKVRGDAPLTRASFGMCAGPIPGTIIVAGGTGV
EVDSLRADVIEFNVPSQTWTGVLRDSERTPCRLYGQSMCSYGDNVLLFGG
STGLHYTNDLFEYNIQTSKWRRLATSGWRPSPRYKHQTVVVEDKLYVIGG
GSFTPEQNNIDVYCLNLKTLVWEEVCMKGELPKACVAHTCSFDAETDTIF
LWGGFTSDLSRVQAFFGFHCPTATWVKMKDQSVQAPVAGGASDLANQPPA
RSFHSAAFFRGALYVFSGANGHVRYSDVWRFQIRSTPPTLAFLAAKKLRS
GRMGNPLQGMELMVPEELVEGINHMNEHAERMLG*
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mRNA from alignment at H-elongata_contig65676:2145..3149+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig65676.14149.1 ID=mRNA_H-elongata_contig65676.14149.1|Name=mRNA_H-elongata_contig65676.14149.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1005bp|location=Sequence derived from alignment at H-elongata_contig65676:2145..3149+ (Himanthalia elongata Himel1 dioecious)
TGCCTCAACGACCTGCACGTGTTTGACTTAGAGCGACATCATTGGGCGGA AGTGAAGGTTAGGGGAGATGCGCCATTGACGCGAGCATCGTTCGGCATGT GCGCGGGGCCAATCCCCGGCACTATCATCGTCGCGGGTGGGACTGGGGTG GAGGTGGACAGCCTACGAGCCGACGTGATCGAGTTCAACGTTCCAAGCCA AACCTGGACGGGGGTTCTGAGGGACTCCGAGCGGACGCCCTGCAGGCTTT ACGGACAGAGCATGTGCTCATACGGGGACAACGTGCTGTTGTTCGGTGGC TCCACCGGGCTGCACTACACAAACGACCTCTTTGAATATAACATTCAAAC GAGCAAGTGGAGGAGGTTGGCCACGTCAGGGTGGAGGCCCTCCCCTAGGT ATAAGCATCAGACGGTCGTGGTGGAGGACAAGCTATATGTGATCGGGGGC GGGAGTTTCACGCCAGAGCAAAATAACATAGACGTGTACTGCTTAAACCT GAAAACACTTGTCTGGGAGGAGGTTTGCATGAAAGGGGAACTCCCAAAGG CTTGCGTCGCGCACACCTGTAGCTTCGACGCTGAAACGGACACCATCTTC CTTTGGGGGGGGTTTACCAGCGACCTCAGTCGCGTACAAGCCTTTTTCGG CTTTCACTGTCCCACGGCAACATGGGTAAAGATGAAAGACCAATCCGTCC AGGCGCCGGTGGCGGGAGGAGCGTCTGATCTTGCCAATCAGCCTCCGGCG CGGTCGTTCCACTCAGCGGCATTTTTCCGAGGCGCACTGTACGTTTTCAG CGGCGCGAACGGTCACGTTCGATACTCCGACGTCTGGCGGTTTCAGATTC GCAGTACTCCGCCCACACTGGCCTTCCTCGCGGCGAAGAAGCTGAGGTCG GGCAGAATGGGGAACCCATTGCAGGGTATGGAGCTCATGGTACCCGAAGA GCTTGTCGAAGGAATCAACCACATGAACGAGCACGCGGAGCGGATGCTCG GCTAG
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Coding sequence (CDS) from alignment at H-elongata_contig65676:2145..3149+

>mRNA_H-elongata_contig65676.14149.1 ID=mRNA_H-elongata_contig65676.14149.1|Name=mRNA_H-elongata_contig65676.14149.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2010bp|location=Sequence derived from alignment at H-elongata_contig65676:2145..3149+ (Himanthalia elongata Himel1 dioecious)
TGCCTCAACGACCTGCACGTGTTTGACTTAGAGCGACATCATTGGGCGGA
AGTGAAGGTTAGGGGAGATGCGCCATTGACGCGAGCATCGTTCGGCATGT
GCGCGGGGCCAATCCCCGGCACTATCATCGTCGCGGGTGGGACTGGGGTG
GAGGTGGACAGCCTACGAGCCGACGTGATCGAGTTCAACGTTCCAAGCCA
AACCTGGACGGGGGTTCTGAGGGACTCCGAGCGGACGCCCTGCAGGCTTT
ACGGACAGAGCATGTGCTCATACGGGGACAACGTGCTGTTGTTCGGTGGC
TCCACCGGGCTGCACTACACAAACGACCTCTTTGAATATAACATTCAAAC
GAGCAAGTGGAGGAGGTTGGCCACGTCAGGGTGGAGGCCCTCCCCTAGGT
ATAAGCATCAGACGGTCGTGGTGGAGGACAAGCTATATGTGATCGGGGGC
GGGAGTTTCACGCCAGAGCAAAATAACATAGACGTGTACTGCTTAAACCT
GAAAACACTTGTCTGGGAGGAGGTTTGCATGAAAGGGGAACTCCCAAAGG
CTTGCGTCGCGCACACCTGTAGCTTCGACGCTGAAACGGACACCATCTTC
CTTTGGGGGGGGTTTACCAGCGACCTCAGTCGCGTACAAGCCTTTTTCGG
CTTTCACTGTCCCACGGCAACATGGGTAAAGATGAAAGACCAATCCGTCC
AGGCGCCGGTGGCGGGAGGAGCGTCTGATCTTGCCAATCAGCCTCCGGCG
CGGTCGTTCCACTCAGCGGCATTTTTCCGAGGCGCACTGTACGTTTTCAG
CGGCGCGAACGGTCACGTTCGATACTCCGACGTCTGGCGGTTTCAGATTC
GCAGTACTCCGCCCACACTGGCCTTCCTCGCGGCGAAGAAGCTGAGGTCG
GGCAGAATGGGGAACCCATTGCAGGGTATGGAGCTCATGGTACCCGAAGA
GCTTGTCGAAGGAATCAACCACATGAACGAGCACGCGGAGCGGATGCTCG
GCTAGTGCCTCAACGACCTGCACGTGTTTGACTTAGAGCGACATCATTGG
GCGGAAGTGAAGGTTAGGGGAGATGCGCCATTGACGCGAGCATCGTTCGG
CATGTGCGCGGGGCCAATCCCCGGCACTATCATCGTCGCGGGTGGGACTG
GGGTGGAGGTGGACAGCCTACGAGCCGACGTGATCGAGTTCAACGTTCCA
AGCCAAACCTGGACGGGGGTTCTGAGGGACTCCGAGCGGACGCCCTGCAG
GCTTTACGGACAGAGCATGTGCTCATACGGGGACAACGTGCTGTTGTTCG
GTGGCTCCACCGGGCTGCACTACACAAACGACCTCTTTGAATATAACATT
CAAACGAGCAAGTGGAGGAGGTTGGCCACGTCAGGGTGGAGGCCCTCCCC
TAGGTATAAGCATCAGACGGTCGTGGTGGAGGACAAGCTATATGTGATCG
GGGGCGGGAGTTTCACGCCAGAGCAAAATAACATAGACGTGTACTGCTTA
AACCTGAAAACACTTGTCTGGGAGGAGGTTTGCATGAAAGGGGAACTCCC
AAAGGCTTGCGTCGCGCACACCTGTAGCTTCGACGCTGAAACGGACACCA
TCTTCCTTTGGGGGGGGTTTACCAGCGACCTCAGTCGCGTACAAGCCTTT
TTCGGCTTTCACTGTCCCACGGCAACATGGGTAAAGATGAAAGACCAATC
CGTCCAGGCGCCGGTGGCGGGAGGAGCGTCTGATCTTGCCAATCAGCCTC
CGGCGCGGTCGTTCCACTCAGCGGCATTTTTCCGAGGCGCACTGTACGTT
TTCAGCGGCGCGAACGGTCACGTTCGATACTCCGACGTCTGGCGGTTTCA
GATTCGCAGTACTCCGCCCACACTGGCCTTCCTCGCGGCGAAGAAGCTGA
GGTCGGGCAGAATGGGGAACCCATTGCAGGGTATGGAGCTCATGGTACCC
GAAGAGCTTGTCGAAGGAATCAACCACATGAACGAGCACGCGGAGCGGAT
GCTCGGCTAG
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