mRNA_H-elongata_contig6565.14147.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig6565.14147.1
Unique NamemRNA_H-elongata_contig6565.14147.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
[Close]
BLAST of mRNA_H-elongata_contig6565.14147.1 vs. uniprot
Match: A0A6H5JZI7_9PHAE (SCP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZI7_9PHAE)

HSP 1 Score: 172 bits (436), Expect = 4.820e-43
Identity = 91/152 (59.87%), Postives = 108/152 (71.05%), Query Frame = 2 
Query: 2138 DMEMLLEMHNLARCEHNADPLTWSDTVAASAAEYAQVLADACGS-LVHSDSI----YGENLYMCYGSTSCYSPERAMEGLYEEEINSSSIDGYGGHATQILWKSTTELGCALAYC--GDRTY--LVCQYNPPGNYIGMYDENVEVA-AGNGC 2563
            DM  L+++HN ARC HNADPLTWS TVA+SAAE+A+ L   C S L HS       YGENLYMC+GS SCYS ERAMEGLY +E+ S S+  YGGHATQILWKST ++GC +A C  G   Y  LVCQY+PPGNY G Y+E V +  +G  C
Sbjct:  240 DMTELVDLHNEARCVHNADPLTWSSTVASSAAEHAERLTAQCSSNLFHSTQEQRYGYGENLYMCWGSDSCYSHERAMEGLYYDEVQSDSVLQYGGHATQILWKSTEQVGCVVARCTNGGTPYMFLVCQYDPPGNYGGQYEEQVGLPDSGKSC 391
[Close]
BLAST of mRNA_H-elongata_contig6565.14147.1 vs. uniprot
Match: D8LJX3_ECTSI (Pathogenesis-related protein, class 1 n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJX3_ECTSI)

HSP 1 Score: 170 bits (430), Expect = 2.510e-41
Identity = 87/152 (57.24%), Postives = 108/152 (71.05%), Query Frame = 2 
Query: 2138 DMEMLLEMHNLARCEHNADPLTWSDTVAASAAEYAQVLADACGS-LVHSDSI----YGENLYMCYGSTSCYSPERAMEGLYEEEINSSSIDGYGGHATQILWKSTTELGCALAYCGDR----TYLVCQYNPPGNYIGMYDENVEVA-AGNGC 2563
            DM  L+++HN ARC HNADPLTWS TVA+SAAE+A+ L   C S L HS       YGENLYMC+GS SCYS E+AMEGLY +E+   S+  YGGHATQILWK+T ++GC +A C +     T+LVCQY+PPGNY G Y+E V +  +G  C
Sbjct:  341 DMTELVDLHNEARCVHNADPLTWSSTVASSAAEHAERLTAQCSSSLFHSTQEQRYGYGENLYMCWGSDSCYSHEKAMEGLYYDEVQFDSVLQYGGHATQILWKATEQVGCVVARCTNGGTPYTFLVCQYDPPGNYGGQYEEQVGLPDSGKSC 492
[Close]
BLAST of mRNA_H-elongata_contig6565.14147.1 vs. uniprot
Match: A0A6H5JCL1_9PHAE (SCP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCL1_9PHAE)

HSP 1 Score: 148 bits (374), Expect = 4.170e-35
Identity = 116/355 (32.68%), Postives = 164/355 (46.20%), Query Frame = 2 
Query: 1529 HIGCFQIDEE---IVAGYGASNFSYSSEMSTSQCYKKCSRRGATFMALANGFICWCGCGEEDEYSQGGVGMCDTPCWGDEDMMCGGEEAFDLYHIEEGEMAHSSM------ASTSSPMPPPMENKTNEMGTSTFSHMSTGDEFEPLPTRGPVSMMSSQEIPTPPSIETQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMEMLLEMHNLARCEHNADPLTWSDTVAASAAEYAQVLADAC-GSLVHSDSI----YGENLYMCYGSTSCYSPERAMEGLYEEEINSSSIDGYGGHATQILWKSTTELGCALAYCGD----RTYLVCQYNPPGNYIGMYDENV 2539
            ++GCFQ DE+   +  G+ +  F+        +C+  C+  GATF+ L  GF C C  G+E++Y+  G G  +   W           AFDLY +  G+ + +S+      +ST  PMP           TS+  H        P+  R P  ++        PS   +                                                  ++  + C HNADPLTWS TVA+SAAE+A+ L   C  SL HS       YG NLY+ +GS SCYS ++A +GLY +E+ S S+  YGGHATQILWK+  ++GCA A C +      +LVCQY+PPGN  G Y+E V
Sbjct:   81 YVGCFQDDEQSTLLEFGFISGGFN------VERCFMHCTDEGATFLGLKYGFQCSCDFGQEEDYTLNGPG--ERLRW-----------AFDLYSLGGGDDSSTSVTSLPTASSTGFPMPTXXXXXXXXPSTSSLWH--------PV-LRCPRLLLLRDHSDVFPSFPPR-------------------------------------------------HLYTTSWCVHNADPLTWSSTVASSAAEHAEGLTAQCFSSLFHSTQEQRYGYGANLYIRWGSDSCYSHKKATKGLYYDEVQSDSVLQYGGHATQILWKAAEQVGCAGARCTNGGTPHAFLVCQYDPPGNSGGQYEEQV 358
[Close]
BLAST of mRNA_H-elongata_contig6565.14147.1 vs. uniprot
Match: A0A6H5KK50_9PHAE (SCP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK50_9PHAE)

HSP 1 Score: 144 bits (362), Expect = 5.400e-35
Identity = 78/149 (52.35%), Postives = 97/149 (65.10%), Query Frame = 2 
Query: 2138 DMEMLLEMHNLARCEHNADPLTWSDTVAASAAEYAQVLADAC-GSLVHSDSI----YGENLYMCYGSTSCYSPERAMEGLYEEEINSSSIDGYGGHATQILWKSTTELGCALAYCGDR----TYLVCQYNPPGNYIGMYDENVEVAAGN 2557
            DM  LL++HN ARC H ADPL WSD V +SAAE+A  L D C  SL HS +     YGENL+MC+G+ +CY+ E AME LY EE+   ++  Y GHATQILWKST ++GC LA C +     T+LVCQY+P GN  G  +   EV   N
Sbjct:   79 DMTGLLDLHNEARCVHGADPLGWSDPVTSSAAEHAARLTDQCTSSLFHSTTDQRYGYGENLFMCWGTDTCYNHEYAMEKLYVEEVQFGAVTDYIGHATQILWKSTKKVGCVLAQCTNGGTPYTFLVCQYDPAGNMGGDKEYIEEVGLPN 227
[Close]
BLAST of mRNA_H-elongata_contig6565.14147.1 vs. uniprot
Match: D8LJW7_ECTSI (Pathogenesis-related protein, class 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJW7_ECTSI)

HSP 1 Score: 139 bits (350), Expect = 2.050e-32
Identity = 75/145 (51.72%), Postives = 94/145 (64.83%), Query Frame = 2 
Query: 2138 DMEMLLEMHNLARCEHNADPLTWSDTVAASAAEYAQVLADAC-GSLVHSDSI----YGENLYMCYGSTSCYSPERAMEGLYEEEINSSSIDGYGGHATQILWKSTTELGCALAYCGDR----TYLVCQYNPPGNYIGMYDENVEV 2545
            DM  LL++HN ARC H+ADPL WSD V +SAAE+A  L D C  SL HS       YGENL++C+G+ +CY+ + AME LY EE+    +  Y GHATQILWKST  +GC LA C +     T+LVCQY+P GN  G  +   EV
Sbjct:  166 DMAGLLDLHNEARCVHSADPLGWSDPVTSSAAEHAVRLTDQCTSSLFHSTREQRYGYGENLFVCWGTDTCYNHDYAMEHLYVEEVQFDDVTDYIGHATQILWKSTKNVGCVLAGCSNGGTPYTFLVCQYDPAGNMGGDDEYRQEV 310
[Close]
BLAST of mRNA_H-elongata_contig6565.14147.1 vs. uniprot
Match: A0A8E6Y896_MONPR (Pathogenesis-related protein 1 n=1 Tax=Moniliophthora perniciosa TaxID=153609 RepID=A0A8E6Y896_MONPR)

HSP 1 Score: 115 bits (287), Expect = 6.720e-26
Identity = 65/137 (47.45%), Postives = 84/137 (61.31%), Query Frame = 2 
Query: 2138 DMEMLLEMHNLARCEHNADPLTWSDTVAASAAEYAQVLADACGSLVHSDSIYGENLYMCYGSTSCYSPERAMEGLYEEEINSSSIDG-YGGHATQILWKSTTELGCALAYCGDRTYLVCQYNPPGNYIGMYDENVEV 2545
            D++  L+ HN  R +HNA+PLTW++ VAA+A    Q  AD C ++ HS   YGENL    GS     P  A   L+ +E++    +     H TQ++WKSTTELGCA+A C   TY VC YNPPGN IG + ENVEV
Sbjct:   28 DIDQWLDAHNEVRAQHNAEPLTWNNQVAATA----QSWADQC-TMEHSGGQYGENLAWGGGSF----PIPAAVKLWADEVSEYDPNNPQYSHFTQVVWKSTTELGCAVADCSGTTYHVCSYNPPGNVIGQFPENVEV 155
[Close]
BLAST of mRNA_H-elongata_contig6565.14147.1 vs. uniprot
Match: A0A0W0G968_9AGAR (Pathogenesis-related protein 1 n=10 Tax=Moniliophthora TaxID=221102 RepID=A0A0W0G968_9AGAR)

HSP 1 Score: 110 bits (274), Expect = 3.770e-24
Identity = 62/137 (45.26%), Postives = 80/137 (58.39%), Query Frame = 2 
Query: 2138 DMEMLLEMHNLARCEHNADPLTWSDTVAASAAEYAQVLADACGSLVHSDSIYGENLYMCYGSTSCYSPERAMEGLYEEEINSSSIDG-YGGHATQILWKSTTELGCALAYCGDRTYLVCQYNPPGNYIGMYDENVEV 2545
            D++  L  HN  R +HNA PLTW+D VAA+A  +    A+ C ++ HS   YGENL    GS     P  A   L+ +E++    +     H TQ++WKSTTELGC +A C   TY VC YNPPGN IG +  NVEV
Sbjct:   28 DVDQWLNAHNEVRVQHNAQPLTWNDQVAATAQNW----ANRC-TMQHSGGQYGENLAWGTGSF----PISAAVKLWADEVSEYDPNNPQYSHFTQVVWKSTTELGCGVADCSGTTYYVCNYNPPGNVIGQFPGNVEV 155
[Close]
BLAST of mRNA_H-elongata_contig6565.14147.1 vs. uniprot
Match: A0A6H5KE93_9PHAE (SCP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE93_9PHAE)

HSP 1 Score: 112 bits (280), Expect = 6.650e-24
Identity = 64/140 (45.71%), Postives = 86/140 (61.43%), Query Frame = 2 
Query: 2141 MEMLLEMHNLARCEHNADPLTWSDTVAASAAEYAQVLADA--CGSL--VHSDSIYGENLYMCYGSTS----------CYSPERAMEGLYEEEINSSSIDGYGGHATQILWKSTTELGCALAYCGDR--TY--LVCQYNPP 2506
            ++ LLE+HN ARC H   PL +++ VAA+A  YA VLA    CGS    HS  + GEN+++C  S+S          C+SPE AME  Y+ ++   S   YG +ATQ+LWKSTT++GCAL  C     TY  LVC+Y+PP
Sbjct:   84 LDRLLELHNAARCMHATGPLEFAEPVAATAKTYADVLASESMCGSAEAAHSTGL-GENVFVCAASSSFSGNGAPTSACFSPEIAMEAFYDSQVGGGSTSTYGPYATQVLWKSTTQIGCALRACEKEGLTYDILVCRYSPP 222
[Close]
BLAST of mRNA_H-elongata_contig6565.14147.1 vs. uniprot
Match: D8LQY8_ECTSI (SCP-domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQY8_ECTSI)

HSP 1 Score: 108 bits (271), Expect = 1.550e-22
Identity = 62/140 (44.29%), Postives = 84/140 (60.00%), Query Frame = 2 
Query: 2141 MEMLLEMHNLARCEHNADPLTWSDTVAASAAEYAQVLADA--CGSL--VHSDSIYGENLYMCYGSTS----------CYSPERAMEGLYEEEINSSSIDGYGGHATQILWKSTTELGCALAYC--GDRTY--LVCQYNPP 2506
            ++ LLE+HN ARC H   PL +++ VAA+A  YA +LA    CGS    HS  + GEN+++C  S+S          C+SPE AME  Y+ ++       YG  ATQ+LWKSTT++GCAL  C     TY  LVC+Y+PP
Sbjct:  101 LDRLLELHNAARCMHATGPLEFAEPVAATAKTYADLLASESMCGSAETAHSTGL-GENVFVCAASSSLSGDGAPTAACFSPESAMEAFYDSQVGGGPTSTYGPRATQVLWKSTTQIGCALRACEKDGLTYDILVCRYSPP 239
[Close]
BLAST of mRNA_H-elongata_contig6565.14147.1 vs. uniprot
Match: A0A7H4K672_9HYPH (SCP-like extracellular n=1 Tax=Oricola sp. TaxID=1979950 RepID=A0A7H4K672_9HYPH)

HSP 1 Score: 100 bits (249), Expect = 4.740e-21
Identity = 58/137 (42.34%), Postives = 73/137 (53.28%), Query Frame = 2 
Query: 2141 MEMLLEMHNLARCEHNADPLTWSDTVAASAAEYAQVLADACGSLVHSDSIYGENLYMCYGSTSCYSPERAMEGLYEEEIN----SSSIDGYGGHATQILWKSTTELGCALAYCGDRTYLVCQYNPPGNYIGMYDENV 2539
            M+ +L  HN  R  H    LTWS  +AA A    Q  A+ C   VHS S YGENL+M  G+   YSP + ++  Y E  N         G  GH TQI+WKS+++LGC  A C      VC Y PPGNY G + +NV
Sbjct:    1 MQQVLSAHNNHRDRHCVPALTWSPALAAQA----QAWANQCN-FVHSSSGYGENLWM--GTAGYYSPTQVVDSWYAEIANYQYSQPGFSGSTGHFTQIVWKSSSQLGCGRATCQGNDLWVCNYAPPGNYQGQFPQNV 130
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6565.14147.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JZI7_9PHAE4.820e-4359.87SCP domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LJX3_ECTSI2.510e-4157.24Pathogenesis-related protein, class 1 n=3 Tax=Ecto... [more]
A0A6H5JCL1_9PHAE4.170e-3532.68SCP domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KK50_9PHAE5.400e-3552.35SCP domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LJW7_ECTSI2.050e-3251.72Pathogenesis-related protein, class 1 n=1 Tax=Ecto... [more]
A0A8E6Y896_MONPR6.720e-2647.45Pathogenesis-related protein 1 n=1 Tax=Moniliophth... [more]
A0A0W0G968_9AGAR3.770e-2445.26Pathogenesis-related protein 1 n=10 Tax=Moniliopht... [more]
A0A6H5KE93_9PHAE6.650e-2445.71SCP domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LQY8_ECTSI1.550e-2244.29SCP-domain containing protein n=1 Tax=Ectocarpus s... [more]
A0A7H4K672_9HYPH4.740e-2142.34SCP-like extracellular n=1 Tax=Oricola sp. TaxID=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig6565contigH-elongata_contig6565:971..8344 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score181.8
Seed ortholog evalue7e-43
Seed eggNOG ortholog2880.D8LJW8
KEGG koko:K19919,ko:K20412
EggNOG free text desc.peptidase inhibitor activity
EggNOG OGsCOG2340@1,KOG3017@2759
COG Functional cat.ADK
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04090,ko04131
Hectar predicted targeting categorysignal peptide
Exons10
Model size2472
Cds size1332
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931043.2674465-UTR-H-elongata_contig6565:970..19681622931043.2674465-UTR-H-elongata_contig6565:970..1968Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6565 971..1968 -
1691679674.4559171-UTR-H-elongata_contig6565:970..19681691679674.4559171-UTR-H-elongata_contig6565:970..1968Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6565 971..1968 -
1622931043.4400558-UTR-H-elongata_contig6565:8202..83441622931043.4400558-UTR-H-elongata_contig6565:8202..8344Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6565 8203..8344 -
1691679674.5737216-UTR-H-elongata_contig6565:8202..83441691679674.5737216-UTR-H-elongata_contig6565:8202..8344Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6565 8203..8344 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931043.2867017-CDS-H-elongata_contig6565:1968..20351622931043.2867017-CDS-H-elongata_contig6565:1968..2035Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6565 1969..2035 -
1691679674.4693356-CDS-H-elongata_contig6565:1968..20351691679674.4693356-CDS-H-elongata_contig6565:1968..2035Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6565 1969..2035 -
1622931043.3045526-CDS-H-elongata_contig6565:2300..24421622931043.3045526-CDS-H-elongata_contig6565:2300..2442Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6565 2301..2442 -
1691679674.482483-CDS-H-elongata_contig6565:2300..24421691679674.482483-CDS-H-elongata_contig6565:2300..2442Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6565 2301..2442 -
1622931043.3226311-CDS-H-elongata_contig6565:2640..27701622931043.3226311-CDS-H-elongata_contig6565:2640..2770Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6565 2641..2770 -
1691679674.502885-CDS-H-elongata_contig6565:2640..27701691679674.502885-CDS-H-elongata_contig6565:2640..2770Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6565 2641..2770 -
1622931043.3391232-CDS-H-elongata_contig6565:2967..30251622931043.3391232-CDS-H-elongata_contig6565:2967..3025Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6565 2968..3025 -
1691679674.5121672-CDS-H-elongata_contig6565:2967..30251691679674.5121672-CDS-H-elongata_contig6565:2967..3025Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6565 2968..3025 -
1622931043.35801-CDS-H-elongata_contig6565:3171..34241622931043.35801-CDS-H-elongata_contig6565:3171..3424Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6565 3172..3424 -
1691679674.5224438-CDS-H-elongata_contig6565:3171..34241691679674.5224438-CDS-H-elongata_contig6565:3171..3424Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6565 3172..3424 -
1622931043.3780847-CDS-H-elongata_contig6565:3834..39841622931043.3780847-CDS-H-elongata_contig6565:3834..3984Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6565 3835..3984 -
1691679674.5326443-CDS-H-elongata_contig6565:3834..39841691679674.5326443-CDS-H-elongata_contig6565:3834..3984Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6565 3835..3984 -
1622931043.3952112-CDS-H-elongata_contig6565:4281..44381622931043.3952112-CDS-H-elongata_contig6565:4281..4438Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6565 4282..4438 -
1691679674.542818-CDS-H-elongata_contig6565:4281..44381691679674.542818-CDS-H-elongata_contig6565:4281..4438Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6565 4282..4438 -
1622931043.409928-CDS-H-elongata_contig6565:4679..49311622931043.409928-CDS-H-elongata_contig6565:4679..4931Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6565 4680..4931 -
1691679674.5533538-CDS-H-elongata_contig6565:4679..49311691679674.5533538-CDS-H-elongata_contig6565:4679..4931Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6565 4680..4931 -
1622931043.4250376-CDS-H-elongata_contig6565:6981..71041622931043.4250376-CDS-H-elongata_contig6565:6981..7104Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6565 6982..7104 -
1691679674.5638988-CDS-H-elongata_contig6565:6981..71041691679674.5638988-CDS-H-elongata_contig6565:6981..7104Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6565 6982..7104 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig6565.14147.1prot_H-elongata_contig6565.14147.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig6565 1969..7104 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig6565.14147.1

>prot_H-elongata_contig6565.14147.1 ID=prot_H-elongata_contig6565.14147.1|Name=mRNA_H-elongata_contig6565.14147.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=444bp
MMPKAASAVLLATTVVPTVLALNLRTGGPEELQQAVRRVEQRHTDRQLWG
RESGSGTSTRATGNDDRTDGGRGDGARNSTRTADDDDDIVADEAYTHIGC
FQIDEEIVAGYGASNFSYSSEMSTSQCYKKCSRRGATFMALANGFICWCG
CGEEDEYSQGGVGMCDTPCWGDEDMMCGGEEAFDLYHIEEGEMAHSSMAS
TSSPMPPPMENKTNEMGTSTFSHMSTGDEFEPLPTRGPVSMMSSQEIPTP
PSIETQTVTTSTTSTSTTPTPMVTPRTRAPATSVTSTSSKSSTSGSAPAD
MEMLLEMHNLARCEHNADPLTWSDTVAASAAEYAQVLADACGSLVHSDSI
YGENLYMCYGSTSCYSPERAMEGLYEEEINSSSIDGYGGHATQILWKSTT
ELGCALAYCGDRTYLVCQYNPPGNYIGMYDENVEVAAGNGCYS*
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mRNA from alignment at H-elongata_contig6565:971..8344-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig6565.14147.1 ID=mRNA_H-elongata_contig6565.14147.1|Name=mRNA_H-elongata_contig6565.14147.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=7374bp|location=Sequence derived from alignment at H-elongata_contig6565:971..8344- (Himanthalia elongata Himel1 dioecious)
CAATCGCCGAGCCCCCCTCTCACACAACAACACTCCCCGCTCACTTCGCA
AATTCAAGAGGAAGAGGCCCGCTTTCTTCGAGTGTTAATCTGAATCTCTC
CAAGAACAAGGAGATCAAGAGCAGCAGTAACGACCAAACAAGGTGAGTCC
AAGAGCGCACACAGACGGGCTGCTTAAACAACAGCCGACTGTTGTTTGTT
GTTTCTCGCTTCTTCGTCGTTTTCGTGTTTCGACAGGAGGCACATGATTA
GCTTAACGTGCATTATCCACACAAACCGATTTGACCCTGTGAGGCGACGC
CAACGCAGGTTTAACCTGTAGCCCCATCCGTTACGGAGTTTTGCTATTGG
AGATTGTGACATGTTCGGTCGCACGCGCGTACGCTAAACGTTTCTTACGA
AGTTATCACGATGGGCTTCTCCCCGGCATTATTATGATCTTGGGCCAATG
CTGAGATCGTTCGAGAACCCAACTTAATCGAGTGTGTTTGTTTTGTGCTT
GAAGTTATTAGAGAGTACTCAAACTTCTACCTGATGATGGCTGGTCCCCC
GAGCTTCACCGAAAAGTTGGTAGACGGTGTATACGTTCGGGGGAGTTGAA
TAAGCTCAGGGTTTGAAAGAAAAACGTTTGATCCCTATAGAAAAGGCAAC
AAAATTAAAAACAAACGTAGGCTGATTACGCTTGTCCGCCGCAGCCTTTA
CTGTATCAATTGCTCTTCGTCACAACCTCTCATATGTGACAATCCTTGGT
TAGTCTGTATAGCTGGTAGTACTGCACATCCGATTATGTCACCGATGCGG
CATATACGCAGGGTATAGATAATTGCTGCTCGTTGCTTCTCACAACGCAT
TAGAGGCGAGGATTCGAACCAACTTCCTATGTTTTTCAAACTATCCGAAA
ATCCACATAATTTTTGTCTTTACACGCCGCCTTCGGTGAAAATCCGGGTG
GTGGTGGTGGGGGGGGGGGGTTGAGCTCAACGTATTGCGGAAAAATCCAC
AAAATTTCCGCCACAGTACATTACCGCATAAAGTTTGCACATCTAACGGT
ATTTTATTATATACTGGTGTTGTTTGCGCCTCGAGCTGCAGCTCTGAAAA
TTGATGCCCCAGCTGAAGCCTGGAAGTTCGGGTCGCATTCTTGAGCTCAA
CTCCGTCGTTACCGCCGGCCAATATTCACGGTATACTTTTGTTGAATCCG
CCTCCTCTTCCGCTTTTACTTTCATGAAACGATGTCACAGATGATGCCGA
AAGCAGCCAGCGCCGTTCTCCTGGCAACTACGGTGGTCCCGACCGTTTTA
GCCCTCAATCTCCGCACCGGTGGCCCCGAAGAGCTACAGCAAGCCGTCCG
CCGAGTCGAGCAAGTGAGGGCTGCGAATCTATGACCATTTTCCCAATCCG
TCCACAGGAGTTTCACGGACTCTACCAAATCCGGACCATTTGATATGTGG
TCCTCACATATAGCAGAATATGTACCAACCGGATATATCTTGTCGCCTGA
TCATTTTGCGGGGAAATTCATGCACATTAAGTGTATGTATTTGTTATACG
CGCTACATTTTGTTTTTTTTTTGCGTCAAGAAAATGCTAACTTCACTTCA
ATATTCGGTAACTCGTCAGCGACAGACTGCACCGATGCACTTACAGAGGG
GGGGGGTGTCAAGTGTACATGCGTTAGCTGTTAGACCATTGACCATGCGT
CCTCGAGAGGTTGGAGTATTGCTACAGGAGGAGTAGGCGTAATCAAAATA
TCCATGTCTTAGTTATTCGACCATTGAACACGCTTCCCCGAAAGTACAGA
GAATTATTCCAATATGATCGACCGTCCATGGTCATTTGGAGGGTGCATTT
AAAACGTGGGGGGGAGCGATCGGCAAATCACTCATCAGTCGGTAGCTGTG
GCTGGGTTGGGCATATATAAGCTTCTTTCACGGGTATAACGTGGTGTAGT
TTTAAGACTGTCTTATTATTCCGCTTGATATAAAGACATGGATAGTGAGA
GCCGAAGTAGTCGAAGCTCTTCCATATGGCTGCGTAGCATGAACCCTACA
CCAAGAGCCCTACAAAAAGTTTTTCACCGTACGTCACCGGGTATTGCTGC
GCATCATTGATAAGCGGGGTCAATCATGAGACCAGCGCACCCTCTCGTAA
AGCAACGCCCTAGAGAAGACCGGCTGCGAGAGAATCAAAACGACTGTAAG
GATGAGAAGATTACTGTGGATGGGGGCGATCATGCGAGTACATGACCCGC
GACTACCCCGGCGGGTCAGTTTTGAGGCACTCGATGAAGGAAGGAAGAGA
GGGCGGAAACTGAAGGAGAAATAATAGATCAACTGCGTGAAGAAGATGGA
CGGCCGATATATTGTCATTTTGAGTGACTGGTTGACCTTGTTGTTGTAAG
AGAAAAACTGACACGATGTCGAGCAAGAGGGATGGGGGGGGGGTCACTAG
TGCTTTGAAAAAGAAAGAGGAATAAGCGTCCCAAGCCCACCAGGAAAGAA
CGGTGGTTAAAGCGCTAGTTGTGCCATAGGTTGCAGTTGGGCATACTGGC
GAGGTGCTCTTGTAGCACCTGGAATGTGTATCCTATCACAGTTCGGACGA
GGCTGCATGCAGTAGAGTAGCCAGGGATCGCTTTTCTTGGGCATTGATAT
CACACCACCTATGTTACCCCAGTGATATGATACATTTTTATTCGTGTACT
CTTCTTTGATGGCCCTAGTCTGTTTATGGATTCCCTCGCCAAATGTCTTT
TGGATTGGTACACATAGCAATTATACTCTGTGTGTGCATTTATTACGCAA
TGATCCTCCCAATGGAGGGTCAGGTGTGTGTGCGTGTGTGTGTGTGCGTA
CTTATTAATTTGCGCATAACCACGCAATCCGACTCTGTCATGCTATCATA
GTCATAGTCCTTCTAGGCTACTCGCATTGGCCTTCCCTATCGGGGATCAA
CCATATACAGGGTGTGCTAGATCACATCGATGAAACGCATCGCTGCAGCG
ATCCAATTCGATCTCTCCTACATGTCACTCCGCGTGGTAATGAGGTCGAG
AACAGCTGAGATAGCTGCATACGGTACAAAACGAGTCTAGAACCCCCACT
TGCTGAAGCCATCTCTCAAAGTCTCACATATATTTTTTGCCACCCCTCAT
TTGTATTGGGGTGCGTTTACAGGGAAAGGGTGTTGATACACAAAACCGCA
AGCCATGCCCGCGGGCATCCTTGCGTTTACTGCGGCAGCTTTGCAGTGTT
CTAGCCTCAGTGAGCCCTCTTTTCGTCTGCATCATGTAGAATACACTTTG
CTCTACGACCCCACTACTATATATACCAGTGTGGCTTTTCACCATGTATC
ATATAAACATATATAGTTGACTTGTGCCATGTGGTTCAACCCCCGACACC
ATTGGTTGGACAGCGTCATACTGACCGGCAGCTTTGGGGGAGAGAATCCG
GGTCCGGAACCTCTACTCGCGCCACCGGCAACGACGACAGAACCGATGGG
GGCAGGGGAGATGGCGCCAGGAATTCTACTCGCACCGCAGACGACGACGA
CGACATAGTCGCTGATGAGGCTTACACGCACATTGGTTGCTTCCAAATTG
ACGAGGAAATAGTCGCTGGCTACGGCGCATCGAACTTCAGCTATTCCAGT
GAAATGTCAACAAGCGTAAGTGTTAATTGTTCGCGCGGTTAAGTCTCAAG
CTCCTTGACGATATGAAATATACTTTTCATAGAGAGCGATGTGCATTGCT
TACTTCGTAGAACTGCAGACCTCTCGTATATTTTGATATTCAAAGTAAAA
TAGGTGTTTGATTGATTACACTCGTCCTGCCGTAGTATTATTTGCCGCAT
TTTGAGATATTTCGCGCGTCCCACACGTCGGGCAACAAATGCTCTCATTC
TTGCAGCAATGCTACAAGAAATGCAGCAGAAGGGGAGCCACCTTCATGGC
CCTCGCCAACGGCTTCATATGTTGGTGCGGCTGCGGGGAGGAAGACGAAT
ACTCTCAGGGGGGTGTCGGCATGTGCGATACGCCTTGCTGGGGGGACGAA
GACATGATGTGCGGTGCGTATAAAAGCTAATGTTCATAGTTCGAGCATGT
TATGAGGGTATAATTGGACTTCCTCTCATCGAAGCCTGCACATCTTGAAT
CCAAATATCGTCCAACTATGTATTACCGACTTCATTAAATGCTCAATCGT
GCGAGCTTGGCTGTGTTCTCTTTTTATTTTTCCAGGCCCGAGGTAGGATA
TACGAGGACTTACTATTAATACATACTATAGTCGAGACTATAATATTATA
CGAATACCTCGCTGCGAACGGAGTAAACACGTGCACTTTGCTTCTGGTTG
TTGCGTACAGGTGGAGAGGAAGCCTTCGATCTATACCACATCGAAGAAGG
AGAAATGGCCCACTCGTCCATGGCGTCAACATCTTCCCCAATGCCACCCC
CAATGGAAAACAAAACTAACGAGATGGGCACCTCGACATTTTCGCACATG
TCTACCGGCGGTGCGTCCGTTTAAATGCGATGTAAATTATCGAATTTATA
TTCTTAAGAGATGTGCCGCTGGGCCCGGCTCCCCACTTGCGAAGTCGTCT
GACATTCGTACGACGTCGCCGGGTACTACGACGGTGACTGCTTATCGGTC
CTGAGGATTATGAAGACTATCATTGCTAAATCGAATCCTTGGCGAATCGT
ACAATGTGGCCAAAGCTGCCCCTCTTGATGAGTGAAGGTAGCGTTTAGCA
CTCCGACTTCGTAAGGGACGCTGAGGCAGGATGCCAAAAACACGACAAAG
TTTCCAATCGGTATACCCTGAACCCCGCCGTTTTCCCCACGCCCGTGAGT
GCCTCTTCACAAGCAATTTTATATCCCTCACTGACCTTTCTGCCCACGTT
TCCCTTCAAACTCGGCTCAGATGAATTCGAGCCCCTGCCGACTCGTGGCC
CGGTCAGCATGATGTCATCGCAGGAGATTCCTACGCCTCCCTCGATCGAG
ACACAAACCGTAACGACTTCAACAACGTCGACATCGACCACACCTACTCC
CATGGTCACACCTCGAACGCGCGCACCTGCCACGTCGGTCACATCGACCA
GCTCCAAGTCGTCGACATCCGGGTCTGCCCCCGCTGACATGGAAATGCTG
CTGGAAATGCACAATCTCGCCAGGCGAGTGCTTAGCCTTTTCAGAAAACA
GGTGTCATACATAATTGAAGTTGCCATGATTCAATGGTGTATCAAAGTCT
TATTGTGCGAGTATATGCTTTCATCCAGCTTAACAACTACTTGGCATGAC
TATTATCTGCGGGGCTCAGGTGTGAACACAACGCGGACCCTCTAACGTGG
AGCGACACGGTGGCGGCCAGTGCAGCGGTAAGCCGTTTATGTATTGTCTC
GTGTGGATGCCTCTCTACTTCGTTAAGATCGAAAGCATCGCAACGTTTTC
GTTGGTCGAGGGTTTGGAACTCTATCAAATACATCGCTGAGACAAACGGC
ATCATTATACTAATATAACTCGAGTTTTGCAACTTTCATTATCACTCCCT
GTGAAACCATGCTTTGGCGCACAGGAATACGCCCAAGTTCTTGCCGACGC
TTGCGGAAGTTTGGTTCACAGCGATAGCATCTACGGCGAGAATCTGTACA
TGTGTTATGGTAGCACGTCGTGCTATTCACCCGAGCGCGCAATGGAGGGG
TTATGTGAGTTTTTCAGGCGCGGACCTCGTGTAATCACCATTTCCCTCTC
GAATTATCGATAATTCGTCTTCGTCGTGGCCAATTATTCGATTATCACTT
ATTAATGTCATTACATTACATCTATTAATAGTTTTTATTTTATGAGCAAC
TAACTATCATATCCGCCTGCTGGTGTAAACGGTGCTGTCAACTTCACCGC
AGATGAGGAGGAGATCAATTCCAGCAGCATTGACGGATACGGAGGTCACG
CGACGCAAATCCTCTGGAAATCGACCACGGAGCTTGGCTGCGCATTGGCG
TACTGTGGGGACAGGACGTACCTCGTGTGCCAGTACAACCCTCCGTGAGT
TTAGCTTTTCGTAAGATATGTGTTTCCTCCTTTTCACGAAAGACCGTGGA
CTGCACCCTAAACTATCTCACATTCTTAGCAAGCGCATCACACAAAGCTC
ATTTACCATGATCGGTGACGGCAGAGCAGTGATTTTTTCCAGATAATCCT
GTCGTTACAATTGCTCTTGAGTGTCAAGATAGGGGACCATGTAAAGAATC
GTAATGGACGTGACCGCTCTGACGTCTTGATGCGTTCGCCCTACTCTGCT
TTTCTCCAGCGGTAATTACATCGGAATGTACGATGAGAATGTGGAGGTCG
CCGCCGGAAATGGATGCTACTCGTGAGCAACCACGCCCCTTCCAGTATTT
ACTTCCAAGATAAACTTCTTAGCTCAGGATTCTTGTTCTTAGTAATAGAG
CGACTATCAAACGATGCCGTTGGAGTGCGTTTGTTCTTTAGAATATAGAT
GAGTGAGTAGTATCGAAGTAGACGCAATCGGTTACGGCTGTTGTTATGAC
ACGGGAGCCCCCACATGCGTCAGCGGCGCGTTTCTTCACCCCAGAAACTT
GAGGACAAAACCTTCTGTCATTTGGACACCGATGGCAAGTCGGTAGGTGG
TCGCTTCGTGCCCCAGGTAGTCTCTCCAGGACAGTCGAGATCAATGTCAG
CGTGACGCGTTGTTGCGCTTTCGCCGCACCTCTGGCTCTAATGTGGTGAC
AGGCTGGTATTATTTCCCATTGATATAGTTTATTTCACCAAACCATTTAC
CTTACGTTGGTCCAAGTCTTGCAGATTACATGACTTCGGCGTATTTATCA
TGAGATCCGTGGCCATCGAAGGACGAGGAGCGTAGCGGCTACGGTAAAGA
CTCTTTAGGTGATTGAACCACAACTATAGAGTGAATGCCACCAAGAGGCT
ACGATCGATGCCTCACGTATAGCATTGCTGCACTGTCGCTGAGCCTCTTC
TTTTGTTGTGCTCTTTGGCTGGAGTGTCTCTAGATACATCGACCCTTTCG
TTGCCCGAGTAGCCTAGTGGTAACCGCTTAAGCTATTAGCGTGGAAATAA
TGTTTCTTGCCAGGATGTTGTTTTTGCGTAAGTTGCGGAAAATGCAAGAA
CATGAGTAAGCAAAGTTCAGTCATTATTGGTTGGTGCCTTAGGACCACAG
GTGGGATGGCAACCTTACAGTAGGCGGTACCTATAGCACGATGTTGGATG
ACCCAACGGTAGAAATTGAGAACCAAGAAATTAAAAACTCAAAGCAAATG
TGTTTTGCCAACGGTTGAACCTACTTTGGCCCACTGTGTACGTGTTGTAT
GATCTCGATAACTTTATTTGTGCC
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Coding sequence (CDS) from alignment at H-elongata_contig6565:971..8344-

>mRNA_H-elongata_contig6565.14147.1 ID=mRNA_H-elongata_contig6565.14147.1|Name=mRNA_H-elongata_contig6565.14147.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2664bp|location=Sequence derived from alignment at H-elongata_contig6565:971..8344- (Himanthalia elongata Himel1 dioecious)
ATGATGCCGAAAGCAGCCAGCGCCGTTCTCCTGGCAACTACGGTGGTCCC
GACCGTTTTAGCCCTCAATCTCCGCACCGGTGGCCCCGAAGAGCTACAGC
AAGCCGTCCGCCGAGTCGAGCAAATGATGCCGAAAGCAGCCAGCGCCGTT
CTCCTGGCAACTACGGTGGTCCCGACCGTTTTAGCCCTCAATCTCCGCAC
CGGTGGCCCCGAAGAGCTACAGCAAGCCGTCCGCCGAGTCGAGCAACGTC
ATACTGACCGGCAGCTTTGGGGGAGAGAATCCGGGTCCGGAACCTCTACT
CGCGCCACCGGCAACGACGACAGAACCGATGGGGGCAGGGGAGATGGCGC
CAGGAATTCTACTCGCACCGCAGACGACGACGACGACATAGTCGCTGATG
AGGCTTACACGCACATTGGTTGCTTCCAAATTGACGAGGAAATAGTCGCT
GGCTACGGCGCATCGAACTTCAGCTATTCCAGTGAAATGTCAACAAGCCG
TCATACTGACCGGCAGCTTTGGGGGAGAGAATCCGGGTCCGGAACCTCTA
CTCGCGCCACCGGCAACGACGACAGAACCGATGGGGGCAGGGGAGATGGC
GCCAGGAATTCTACTCGCACCGCAGACGACGACGACGACATAGTCGCTGA
TGAGGCTTACACGCACATTGGTTGCTTCCAAATTGACGAGGAAATAGTCG
CTGGCTACGGCGCATCGAACTTCAGCTATTCCAGTGAAATGTCAACAAGC
CAATGCTACAAGAAATGCAGCAGAAGGGGAGCCACCTTCATGGCCCTCGC
CAACGGCTTCATATGTTGGTGCGGCTGCGGGGAGGAAGACGAATACTCTC
AGGGGGGTGTCGGCATGTGCGATACGCCTTGCTGGGGGGACGAAGACATG
ATGTGCGCAATGCTACAAGAAATGCAGCAGAAGGGGAGCCACCTTCATGG
CCCTCGCCAACGGCTTCATATGTTGGTGCGGCTGCGGGGAGGAAGACGAA
TACTCTCAGGGGGGTGTCGGCATGTGCGATACGCCTTGCTGGGGGGACGA
AGACATGATGTGCGGTGGAGAGGAAGCCTTCGATCTATACCACATCGAAG
AAGGAGAAATGGCCCACTCGTCCATGGCGTCAACATCTTCCCCAATGCCA
CCCCCAATGGAAAACAAAACTAACGAGATGGGCACCTCGACATTTTCGCA
CATGTCTACCGGCGGTGGAGAGGAAGCCTTCGATCTATACCACATCGAAG
AAGGAGAAATGGCCCACTCGTCCATGGCGTCAACATCTTCCCCAATGCCA
CCCCCAATGGAAAACAAAACTAACGAGATGGGCACCTCGACATTTTCGCA
CATGTCTACCGGCGATGAATTCGAGCCCCTGCCGACTCGTGGCCCGGTCA
GCATGATGTCATCGCAGGAGATTCCTACGCCTCCCTCGATCGAGACACAA
ACCGTAACGACTTCAACAACGTCGACATCGACCACACCTACTCCCATGGT
CACACCTCGAACGCGCGCACCTGCCACGTCGGTCACATCGACCAGCTCCA
AGTCGTCGACATCCGGGTCTGCCCCCGCTGACATGGAAATGCTGCTGGAA
ATGCACAATCTCGCCAGATGAATTCGAGCCCCTGCCGACTCGTGGCCCGG
TCAGCATGATGTCATCGCAGGAGATTCCTACGCCTCCCTCGATCGAGACA
CAAACCGTAACGACTTCAACAACGTCGACATCGACCACACCTACTCCCAT
GGTCACACCTCGAACGCGCGCACCTGCCACGTCGGTCACATCGACCAGCT
CCAAGTCGTCGACATCCGGGTCTGCCCCCGCTGACATGGAAATGCTGCTG
GAAATGCACAATCTCGCCAGGTGTGAACACAACGCGGACCCTCTAACGTG
GAGCGACACGGTGGCGGCCAGTGCAGCGGTGTGAACACAACGCGGACCCT
CTAACGTGGAGCGACACGGTGGCGGCCAGTGCAGCGGAATACGCCCAAGT
TCTTGCCGACGCTTGCGGAAGTTTGGTTCACAGCGATAGCATCTACGGCG
AGAATCTGTACATGTGTTATGGTAGCACGTCGTGCTATTCACCCGAGCGC
GCAATGGAGGGGTTATGAATACGCCCAAGTTCTTGCCGACGCTTGCGGAA
GTTTGGTTCACAGCGATAGCATCTACGGCGAGAATCTGTACATGTGTTAT
GGTAGCACGTCGTGCTATTCACCCGAGCGCGCAATGGAGGGGTTATATGA
GGAGGAGATCAATTCCAGCAGCATTGACGGATACGGAGGTCACGCGACGC
AAATCCTCTGGAAATCGACCACGGAGCTTGGCTGCGCATTGGCGTACTGT
GGGGACAGGACGTACCTCGTGTGCCAGTACAACCCTCCATGAGGAGGAGA
TCAATTCCAGCAGCATTGACGGATACGGAGGTCACGCGACGCAAATCCTC
TGGAAATCGACCACGGAGCTTGGCTGCGCATTGGCGTACTGTGGGGACAG
GACGTACCTCGTGTGCCAGTACAACCCTCCCGGTAATTACATCGGAATGT
ACGATGAGAATGTGGAGGTCGCCGCCGGAAATGGATGCTACTCGTGACGG
TAATTACATCGGAATGTACGATGAGAATGTGGAGGTCGCCGCCGGAAATG
GATGCTACTCGTGA
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