mRNA_H-elongata_contig65627.14143.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig65627.14143.1 vs. uniprot
Match: D7FXL3_ECTSI (Nudix hydrolase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXL3_ECTSI) HSP 1 Score: 179 bits (455), Expect = 2.080e-55 Identity = 81/120 (67.50%), Postives = 95/120 (79.17%), Query Frame = 1
Query: 1 SGGVVGHGESYEESTRRELQEEMG---------------GVLRHCFSFYYKDGHTNVWGDAWDCLWGGEIIPQPEEVESVHCHTISELIDGRDEAGNALQCTPDGVFALEKYRDWLAASK 315
+GGVVGHGESYE++ RREL+EEMG G LRHCFSF+YKD HTNVWGDAWDC+WGGEI+PQPEEV+SVH +++SELI GRD+AG L+ TPDGV ALEKYRDWLA +K
Sbjct: 83 TGGVVGHGESYEDNARRELEEEMGVKATGGTGEGGGRAEGELRHCFSFHYKDDHTNVWGDAWDCVWGGEIVPQPEEVQSVHRYSLSELIAGRDKAGEKLESTPDGVIALEKYRDWLAETK 202
BLAST of mRNA_H-elongata_contig65627.14143.1 vs. uniprot
Match: A0A1V1WXX1_9DELT (NUDIX hydrolase n=1 Tax=Desulfobacterales bacterium PC51MH44 TaxID=1869304 RepID=A0A1V1WXX1_9DELT) HSP 1 Score: 90.5 bits (223), Expect = 1.060e-20 Identity = 48/100 (48.00%), Postives = 65/100 (65.00%), Query Frame = 1
Query: 1 SGGVVGHGESYEESTRRELQEEMG---GVLRHCFSFYYKDGHTNVWGDAWDCLWGGEIIPQPEEVESVHCHTISELIDGRDEAGNALQCTPDGVFALEKY 291
+GGVV E+YEES RREL+EE+G L H F FYY+DG+ VWG A+ C++ G+I+ Q EEVES + E+I AGN L TPD ++ L++Y
Sbjct: 66 TGGVVLDKETYEESARRELEEELGIRDVPLSHLFDFYYQDGNNRVWGRAYTCVYDGKIVLQEEEVESGSFRDVDEIIRM---AGNELY-TPDSLYVLKRY 161
BLAST of mRNA_H-elongata_contig65627.14143.1 vs. uniprot
Match: A0A7Y4U2S0_9DELT (NUDIX hydrolase YfcD n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7Y4U2S0_9DELT) HSP 1 Score: 90.5 bits (223), Expect = 1.060e-20 Identity = 49/107 (45.79%), Postives = 65/107 (60.75%), Query Frame = 1
Query: 1 SGGVVGHGESYEESTRRELQEEMG---GVLRHCFSFYYKDGHTNVWGDAWDCLWGGEIIPQPEEVESVHCHTISELIDGRDEAGNALQCTPDGVFALEKYRDWLAAS 312
+GGVV GESYEES RREL+EEMG L FY+ D T VWG A+ C++ G + Q EEVESV T+ E+ Q TPDG++ L++YR+ L+A+
Sbjct: 67 TGGVVLAGESYEESARRELEEEMGIRQVPLTRLSDFYFADERTQVWGAAFSCVYEGPLSLQAEEVESVSLMTMDEIFH----RARTEQFTPDGLYVLQRYRENLSAA 169
BLAST of mRNA_H-elongata_contig65627.14143.1 vs. uniprot
Match: A0A7V3BHW3_9BACT (NUDIX hydrolase YfcD n=1 Tax=bacterium TaxID=1869227 RepID=A0A7V3BHW3_9BACT) HSP 1 Score: 82.4 bits (202), Expect = 1.330e-17 Identity = 44/100 (44.00%), Postives = 61/100 (61.00%), Query Frame = 1
Query: 1 SGGVVGHGESYEESTRRELQEEMG--GV-LRHCFSFYYKDGHTNVWGDAWDCLWGGEIIPQPEEVESVHCHTISELIDGRDEAGNALQCTPDGVFALEKY 291
+GGVV GE+YE+ REL EEMG GV L F FY+++ HT +WG A+ C + GEI+ QPEEVES +I +++ TPDG++ L +Y
Sbjct: 67 AGGVVLAGETYEQGAERELNEEMGIRGVPLTSLFDFYFENEHTCLWGRAFSCTYDGEIVLQPEEVESGAFVSIQDIL----RRAETEPFTPDGLYVLRRY 162
BLAST of mRNA_H-elongata_contig65627.14143.1 vs. uniprot
Match: A0A1Q6DM17_9DELT (NUDIX hydrolase n=1 Tax=Desulfobulbaceae bacterium DB1 TaxID=1920419 RepID=A0A1Q6DM17_9DELT) HSP 1 Score: 77.8 bits (190), Expect = 8.500e-16 Identity = 41/100 (41.00%), Postives = 62/100 (62.00%), Query Frame = 1
Query: 1 SGGVVGHGESYEESTRRELQEEMGGV---LRHCFSFYYKDGHTNVWGDAWDCLWGGEIIPQPEEVESVHCHTISELIDGRDEAGNALQCTPDGVFALEKY 291
+GGVVG GE+YEES RREL+EE+G V L F F+++D VWG A+ C + G + Q EEVE + ++ +E ++ TPDG++AL+++
Sbjct: 68 TGGVVGAGETYEESARRELEEELGIVGQPLDALFDFFWQDEGNRVWGRAFVCRYDGPVALQQEEVEWGEFMPLGQV----NEMVKSMPFTPDGLYALDRF 163
BLAST of mRNA_H-elongata_contig65627.14143.1 vs. uniprot
Match: A0A2E8YDR9_9GAMM (NUDIX hydrolase n=1 Tax=Thiotrichales bacterium TaxID=2026796 RepID=A0A2E8YDR9_9GAMM) HSP 1 Score: 75.1 bits (183), Expect = 8.660e-15 Identity = 38/100 (38.00%), Postives = 55/100 (55.00%), Query Frame = 1
Query: 1 SGGVVGHGESYEESTRRELQEEMG---GVLRHCFSFYYKDGHTNVWGDAWDCLWGGEIIPQPEEVESVHCHTISELIDGRDEAGNALQCTPDGVFALEKY 291
+GGVV + ESY+ S RE EE+G + HCF F+Y+D +WG + C++ GE + QPEEVES ++ + +G TPD ALE +
Sbjct: 66 AGGVVLNDESYQLSAEREAAEELGIRQTPIEHCFDFFYEDDLNRIWGAVFKCVYDGEFVLQPEEVESGRFMSVDAVRNGE-----VSPVTPDSEVALEHF 160
BLAST of mRNA_H-elongata_contig65627.14143.1 vs. uniprot
Match: A0A0S8AF51_9DELT (NUDIX hydrolase n=1 Tax=Desulfobacterales bacterium SG8_35 TaxID=1703400 RepID=A0A0S8AF51_9DELT) HSP 1 Score: 75.1 bits (183), Expect = 1.160e-14 Identity = 39/100 (39.00%), Postives = 59/100 (59.00%), Query Frame = 1
Query: 1 SGGVVGHGESYEESTRRELQEEMG---GVLRHCFSFYYKDGHTNVWGDAWDCLWGGEIIPQPEEVESVHCHTISELIDGRDEAGNALQCTPDGVFALEKY 291
+GGVV GESY+ES RREL+EE+G VL F+F+Y++G VWG + C+ E+ Q EE+ES ++++ + TPDG+ L++Y
Sbjct: 67 AGGVVLDGESYDESARRELEEELGIRDAVLTPHFTFFYEEGTNQVWGRVYSCIHDEEMTLQAEEIESGFFADPAQVLA----LSKTKKFTPDGIHVLKRY 162
BLAST of mRNA_H-elongata_contig65627.14143.1 vs. uniprot
Match: A0A0S7YVC9_9DELT (Nudix hydrolase domain-containing protein n=1 Tax=Deltaproteobacteria bacterium SG8_13 TaxID=1703398 RepID=A0A0S7YVC9_9DELT) HSP 1 Score: 74.7 bits (182), Expect = 1.510e-14 Identity = 38/101 (37.62%), Postives = 59/101 (58.42%), Query Frame = 1
Query: 1 SGGVVGHGESYEESTRRELQEEMG----GVLRHCFSFYYKDGHTNVWGDAWDCLWGGEIIPQPEEVESVHCHTISELIDGRDEAGNALQCTPDGVFALEKY 291
+GGVV GE+Y ES +REL EE+G + RH F FY++D + +WG + C + G I+ QPEE+ES + +++D TPDG+ L+++
Sbjct: 66 AGGVVLRGETYHESAKRELAEELGISGVEIQRH-FDFYHQDDRSRLWGRVYSCRYDGPIVLQPEEIESGAFCEVEQVLD----MSTRELFTPDGLVVLKRF 161
BLAST of mRNA_H-elongata_contig65627.14143.1 vs. uniprot
Match: A0A0S8CVI4_9DELT (NUDIX hydrolase n=1 Tax=Desulfobacterales bacterium SG8_35_2 TaxID=1703401 RepID=A0A0S8CVI4_9DELT) HSP 1 Score: 73.9 bits (180), Expect = 3.120e-14 Identity = 40/100 (40.00%), Postives = 58/100 (58.00%), Query Frame = 1
Query: 1 SGGVVGHGESYEESTRRELQEEMG---GVLRHCFSFYYKDGHTNVWGDAWDCLWGGEIIPQPEEVESVHCHTISELIDGRDEAGNALQCTPDGVFALEKY 291
+GGVV GESY+ES RREL EE+G L F+FYY++G VWG + C+ G+++ Q EEV S +++ E TPDG++ L++Y
Sbjct: 75 AGGVVLAGESYDESARRELHEELGIQNVSLAALFTFYYEEGKNKVWGRVYSCIHDGKLVLQAEEVASGFFAFPEKVLQISAEE----PFTPDGLYVLKRY 170
BLAST of mRNA_H-elongata_contig65627.14143.1 vs. uniprot
Match: W4L4J0_9BACT (Nudix hydrolase domain-containing protein n=1 Tax=Candidatus Entotheonella factor TaxID=1429438 RepID=W4L4J0_9BACT) HSP 1 Score: 72.0 bits (175), Expect = 1.760e-13 Identity = 40/102 (39.22%), Postives = 57/102 (55.88%), Query Frame = 1
Query: 1 SGGVVGHGESYEESTRRELQEEMG---GVLRHCFSFYYKDGHTNVWGDAWDCLWGGEIIPQPEEVESVHCHTISELIDGRDEAGNALQCTPDGVFALEKYRD 297
+GGVV HGESYE S REL+EE+G L F+ Y++D VWG + C++ G+++ Q EEVES I ++ + + TPD V L +Y D
Sbjct: 67 TGGVVLHGESYELSATRELEEEVGIRDVPLTWHFNVYFEDDGCRVWGSVFSCVYDGDMVLQAEEVESGEFLPIETIL----QRVHFAPYTPDSVMVLRRYLD 164 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig65627.14143.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig65627.14143.1 >prot_H-elongata_contig65627.14143.1 ID=prot_H-elongata_contig65627.14143.1|Name=mRNA_H-elongata_contig65627.14143.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=107bp SGGVVGHGESYEESTRRELQEEMGGVLRHCFSFYYKDGHTNVWGDAWDCLback to top mRNA from alignment at H-elongata_contig65627:1378..2651- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig65627.14143.1 ID=mRNA_H-elongata_contig65627.14143.1|Name=mRNA_H-elongata_contig65627.14143.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1274bp|location=Sequence derived from alignment at H-elongata_contig65627:1378..2651- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig65627:1378..2651- >mRNA_H-elongata_contig65627.14143.1 ID=mRNA_H-elongata_contig65627.14143.1|Name=mRNA_H-elongata_contig65627.14143.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=642bp|location=Sequence derived from alignment at H-elongata_contig65627:1378..2651- (Himanthalia elongata Himel1 dioecious)back to top |