mRNA_H-elongata_contig6548.14130.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig6548.14130.1 vs. uniprot
Match: D8LFC3_ECTSI (Diaminohydroxyphosphoribosylaminopyrimidine deaminase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFC3_ECTSI) HSP 1 Score: 407 bits (1046), Expect = 5.640e-130 Identity = 250/480 (52.08%), Postives = 308/480 (64.17%), Query Frame = 2
Query: 185 TGAERDSACMRRALELAARGLGRTRPNPAVGCVIVDKNGVVVGEGFHPRAGEPHAEVWAIRQAKDRARGGTAYVTLEPCNHFGRTPPCTTALVDSGILRVVAGMVDPDPRTAGGGLKRLAERGLDVSVGVEAAACQTLNSPFAHRIWEKSCYGVLHCSLGGVDSSE------------LEDTCQEAALTLLPAYHSYKEHDAIVVEGCSGVAKLEACLESLPSTTLLVVVVTSAG--GIEEELGPVSESRLWEDPTDGSVLVV---AVSEGNEKSPGPIRTRLASRGVGIVEFSLP--PEQPQQRLPSVVGQTSLASAQEVAAA-AVSRELYRRGMLSAAWDVGPGLATKALKGGHIQRVLVRKRQRGGGVGKEQE-----PPSG---------GARGGPEGETXXXXXXXXXXXXXXXXXXXXALAVGVIGRLCGKGSGEEGVRARLRRNDGLLPWA-GSEAVTEVVLPVPAIEVDPSS 1519
+G E D A MRRALELAA+GLG TRPNPAVGCVI+DK G VVGEGFHPRAGEPHAEVWAIRQA +RARGGTAYV+LEPCNHFGRTPPCTTAL++ G+ RVVAGMVDPDPRTAG GL+RLA+ G+DVSVGVE AAC LNS F HR+ KSCYGVLHC L G S L+DT +E L + P +++E+DAIVVEG SGVAKLEAC +LP T L VV+V + G+E EL V ESRL E+ + +V+ + A +G+ G +R L SRG+ +V+F P P P L +T+ A+A AAA AVSREL+RRGMLSAAW+VGP +A L+ GH+QR L+R+R+ GG G + E P+ GA GP E XXXXX + R+ + SG EGVR +RR G+ PW +E+ EV+LP ++ S+
Sbjct: 65 SGLEVDGAHMRRALELAAKGLGHTRPNPAVGCVILDKEGSVVGEGFHPRAGEPHAEVWAIRQAGERARGGTAYVSLEPCNHFGRTPPCTTALLECGVARVVAGMVDPDPRTAGSGLRRLADAGIDVSVGVEGAACHALNSAFVHRVSHKSCYGVLHCCLDGACSRSIPQSGSRAGVGGLQDTARENDLAVPPGGRNFEEYDAIVVEGRSGVAKLEACNSALPPTALRVVIVGAGSDEGLEIELAGVLESRLLEESPERTVVFMPATAGQDGDGSLTGSVRASLMSRGIAVVDFRTPDTPTPPASSLDEERPETATAAATMAAAAGAVSRELFRRGMLSAAWEVGPAMAAVVLRAGHVQRALIRRRRIPGGGGADAEGTFANAPAAEAAVAAARVGAHVGPN-ELVSGSGKGVAGGSVKEXXXXXXXXXXXVLRVMRRLSGREGVR--VRRGGGIFPWGPDAESCIEVLLPTTPLKPPASA 541
BLAST of mRNA_H-elongata_contig6548.14130.1 vs. uniprot
Match: UPI00168041E5 (bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD n=1 Tax=Leptolyngbya sp. FACHB-36 TaxID=2692808 RepID=UPI00168041E5) HSP 1 Score: 221 bits (563), Expect = 2.050e-61 Identity = 141/336 (41.96%), Postives = 191/336 (56.85%), Query Frame = 2
Query: 212 MRRALELAARGLGRTRPNPAVGCVIVDKNGVVVGEGFHPRAGEPHAEVWAIRQAKDRARGGTAYVTLEPCNHFGRTPPCTTALVDSGILRVVAGMVDPDPRTAGGGLKRLAERGLDVSVGVEAAACQTLNSPFAHRIWEKSCYGVLH--CSLGGVDSSELEDTCQEAALTLLPAYHSYKEH-DAIVVEGCSGVAKLEACLESLPSTTLLVVVVTSAGGIEEELGPVSESRLWEDPTDGSVLVVAVSEGNEKSPGPIRTRLASRGVGIVEFSLPPEQPQQRLPSVVGQTSLASAQEVAAAAVSRELYRRGMLSAAWDVGPGLATKALKGGHIQRVLV 1210
MRR L+LA + LG+T PNP VGCVIV ++G VVGEGFHP AG+PHAEV+A+RQA RARGGT YV LEPCNH GRTPPC+ A++ +G+ +VV GMVDPDPR +GGG+ RL G++V VGVE A CQ LN F HR+ +G+L +L G ++ + + T H + DAI+V G + V + L S TT L VV++ + L SE++LW+ T + +V G + ++ +L RGV + E +PS+ AAV LY RG LSA W+ G LA A+ G +Q++L
Sbjct: 22 MRRCLDLARQALGQTAPNPLVGCVIV-QDGEVVGEGFHPAAGQPHAEVFALRQAGKRARGGTLYVNLEPCNHHGRTPPCSEAVIAAGVAKVVVGMVDPDPRVSGGGIARLRSAGINVLVGVEEAVCQQLNEAFVHRVVHHRLFGILKYAMTLDGKIAATSGHSAWVTSPTARAEVHQLRVACDAIIVGG-NTVRRDNPLLTSRQETTPLRVVMSRS------LDLPSEAQLWD--TTIAPTLVFTETGTQPE---VQAQLIQRGVEVHE-----------VPSLTP------------AAVMTHLYDRGCLSALWECGGTLAAAAIADGSVQKILA 321
BLAST of mRNA_H-elongata_contig6548.14130.1 vs. uniprot
Match: A0A7C3PUB2_9CYAN (Riboflavin biosynthesis protein RibD n=1 Tax=Oscillatoriales cyanobacterium SpSt-418 TaxID=2282169 RepID=A0A7C3PUB2_9CYAN) HSP 1 Score: 216 bits (551), Expect = 7.400e-60 Identity = 140/340 (41.18%), Postives = 190/340 (55.88%), Query Frame = 2
Query: 200 DSACMRRALELAARGLGRTRPNPAVGCVIVDKNGVVVGEGFHPRAGEPHAEVWAIRQAKDRARGGTAYVTLEPCNHFGRTPPCTTALVDSGILRVVAGMVDPDPRTAGGGLKRLAERGLDVSVGVEAAACQTLNSPFAHRIWEKSCYGVLHCSL---GGVDSSELEDTCQEAALTLLPAYHSYKEHDAIVVEGCSGVAKLEACLESLPSTTLLVVVVTSAGGIEEELGPVSESRLWEDPTDGSVLVVAVSEGNEKSPGPIRTRLASRGVGIVEFSLPPEQPQQRLPSVVGQTSLASAQEVAAAAVSRELYRRGMLSAAWDVGPGLATKALKGGHIQRVLV 1210
D A M+R LELA + LG+T PNP VGCV+V K G V+GEGFHP+AGEPHAEV+A+R+A A G T YV LEPC+H+GRTPPC+ A++ +GI RVV GMVDP+P+ AG G+ RL E G++V VGVEA+ACQ LN F RI + +G+L ++ G + +S + + DA++V G + V + L S S T L VV++ + L +E++LW D + LV E N P++ +L ++GV I FS P P AAV LY RG LS W+ G LA A+ G +Q+VL
Sbjct: 11 DIAMMQRCLELAQQALGQTAPNPLVGCVVV-KAGQVIGEGFHPKAGEPHAEVFALRRAGSEAAGATLYVNLEPCSHYGRTPPCSEAVIAAGIRRVVVGMVDPNPQVAGKGIARLREHGIEVVVGVEASACQQLNEAFVFRILHQRPFGILKYAMTLDGKIAASSGHSAWVTGTAARSHVHTLRRACDAVIVGG-NTVRQDNPLLTSRTSVTPLRVVLSRS------LDLPTEAQLW-DTSVAPTLVCTEPEANL----PLQAQLKAQGVEIQHFS--PLTP---------------------AAVMAHLYTRGCLSVLWECGGTLAAAAIADGAVQKVLA 314
BLAST of mRNA_H-elongata_contig6548.14130.1 vs. uniprot
Match: A0A2I8A784_9NOSO (Riboflavin biosynthesis protein RibD n=5 Tax=Nostocaceae TaxID=1162 RepID=A0A2I8A784_9NOSO) HSP 1 Score: 217 bits (553), Expect = 1.080e-59 Identity = 142/345 (41.16%), Postives = 188/345 (54.49%), Query Frame = 2
Query: 188 GAERDSACMRRALELAARGLGRTRPNPAVGCVIVDKNGVVVGEGFHPRAGEPHAEVWAIRQAKDRARGGTAYVTLEPCNHFGRTPPCTTALVDSGILRVVAGMVDPDPRTAGGGLKRLAERGLDVSVGVEAAACQTLNSPFAHRIWEKSCYGVLH--CSLGGVDSSELEDTCQEAALTLLPAYHSYKEHDAIVVEGCSGVAKLEACLES--LPSTTLLVVVVTSAGGIEEELGPVSESRLWEDPTDGSVLVVAVSEGNEKSPGPIRTRLASRGVGIVEFSLPPEQPQQRLPSVVGQTSLASAQEVAAAAVSRELYRRGMLSAAWDVGPGLATKALKGGHIQRVLV 1210
G+E D A MRR LELA R LGRT PNP VG VIV KNG +VGEGFHPRAGEPHAEV+A+R A D ARG T YV+LEPCNH+GRTPPC+ ALV +G+ +VV GMVDP+P AGGG+ L G++V VGVE+ ACQ LN F HRI K G+L +L G ++ + T H + V+ G + V + L S + + L VV++ + L +++ LW D T+ LV+ N + L +GV ++E LPS+ Q ++ LY RG S W+ G LA KA+ G +Q++L
Sbjct: 40 GSEFDRAMMRRCLELARRALGRTSPNPLVGAVIV-KNGTIVGEGFHPRAGEPHAEVFALRAAGDLARGATVYVSLEPCNHYGRTPPCSKALVAAGVAKVVVGMVDPNPLVAGGGINTLRAAGIEVLVGVESEACQQLNEGFVHRILHKRPLGILKYAMTLDGKIATNSGHSAWVTNQTARSEVHQLRAACDAVIVGGNTVRQDNPYLTSHQVEAHNPLRVVMSRS------LNLPTDAHLW-DITEAPTLVLTQVGANPD----FQKFLQQKGVEVLE-----------LPSLTPQATI------------EYLYERGFCSVLWECGGTLAAKAISEGAVQKILA 349
BLAST of mRNA_H-elongata_contig6548.14130.1 vs. uniprot
Match: UPI0019B0F55C (Bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=UPI0019B0F55C) HSP 1 Score: 215 bits (548), Expect = 1.670e-59 Identity = 138/340 (40.59%), Postives = 189/340 (55.59%), Query Frame = 2
Query: 200 DSACMRRALELAARGLGRTRPNPAVGCVIVDKNGVVVGEGFHPRAGEPHAEVWAIRQAKDRARGGTAYVTLEPCNHFGRTPPCTTALVDSGILRVVAGMVDPDPRTAGGGLKRLAERGLDVSVGVEAAACQTLNSPFAHRIWEKSCYGVLHCSLGGVDSSELEDTCQEAALTLLPA---YHSYKEHDAIVVEGCSGVAKLEACLESLPSTTLLVVVVTSAGGIEEELGPVSESRLWEDPTDGSVLVVAVSEGNEKSPGPIRTRLASRGVGIVEFSLPPEQPQQRLPSVVGQTSLASAQEVAAAAVSRELYRRGMLSAAWDVGPGLATKALKGGHIQRVLV 1210
D A M+R L+LA + LGRT PNP VG VIV + G +V EGFHP AG+PHAEV+A+R+A DRA+G T YV LEPCNHFGRTPPC+ A+V +GI RVV GMVDPDPR +GGG+ RL E G++V+VGVE A C+TLN F HRI +G+L ++ +D T A +T A H + V+ G + V + L S T L VV++ + L S+++LW+ +++ V K+ ++ L + V ++E + P P AAV LY RG LS W+ G LA +A+ G +Q+VL
Sbjct: 3 DRALMQRCLDLARQALGRTAPNPLVGSVIV-QGGAIVSEGFHPAAGQPHAEVFALREAGDRAQGATLYVNLEPCNHFGRTPPCSEAIVAAGIQRVVVGMVDPDPRVSGGGIARLREAGIEVTVGVEEADCRTLNEAFIHRILHHRPFGILKYAMT-LDGKIATTTGHSAWVTSSAARAEVHQLRAACDAVIVGGNTVRRDNPLLTSRQDPTPLRVVMSRS------LDLPSDAQLWQTNIAPTLVFTEV-----KTNPALQKTLRQQSVEVIEIT--PLTP---------------------AAVMAYLYDRGCLSVLWECGGTLAARAIADGAVQKVLA 306
BLAST of mRNA_H-elongata_contig6548.14130.1 vs. uniprot
Match: UPI001CCC19F1 (bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD n=1 Tax=Kovacikia minuta TaxID=2931930 RepID=UPI001CCC19F1) HSP 1 Score: 214 bits (546), Expect = 2.780e-59 Identity = 135/338 (39.94%), Postives = 187/338 (55.33%), Query Frame = 2
Query: 212 MRRALELAARGLGRTRPNPAVGCVIVDKNGVVVGEGFHPRAGEPHAEVWAIRQAKDRARGGTAYVTLEPCNHFGRTPPCTTALVDSGILRVVAGMVDPDPRTAGGGLKRLAERGLDVSVGVEAAACQTLNSPFAHRIWEKSCYGVLHCSLGGVDSSELEDTCQEAALTLLPAYHSYKEH-----DAIVVEGCSGVAKLEACLESLPSTTLLVVVVTSAGGIEEELGPVSESRLWEDPTDGSVLVVAVSEGNEKSPGPIRTRLASRGVGIVEFSLPPEQPQQRLPSVVGQTSLASAQEVAAAAVSRELYRRGMLSAAWDVGPGLATKALKGGHIQRVLV 1210
M+R LELA + LGRT PNP VG VIV +N ++GEGFHP AG+PHAEV+A+RQAK+RARG T YV LEPCNH+GRTPPC+ A++ +GI RVV GMVDPDPR +GGG+ RL + G++V VGVE AAC+TLN F HRI + +G+L ++ ++ T +A PA + DA+VV G + S T L VV++ + + ++ + LW D + LVV + K + L RG+ ++E + +PS + LY RG LS W+ G LA +A+ G IQ++L
Sbjct: 1 MQRCLELARKALGRTAPNPLVGSVIV-QNSEIIGEGFHPAAGQPHAEVFALRQAKERARGATLYVNLEPCNHYGRTPPCSEAILAAGIKRVVVGMVDPDPRVSGGGIARLQQAGIEVVVGVEEAACRTLNEAFIHRILYQRPFGILKYAM--TLDGKIATTTGHSAWVTSPAARAEVHQLRLGCDAVVVGGNTVRRDNPLLTSRQESPTPLRVVMSRSLDLPDD------ANLW-DTSLAPTLVVTEPKAQPK----FQEMLKQRGIEVLELN-------PLIPSTL----------------MTYLYDRGYLSVLWECGGTLAAQAIADGSIQKILA 301
BLAST of mRNA_H-elongata_contig6548.14130.1 vs. uniprot
Match: A0A367Q305_9NOSO (Riboflavin biosynthesis protein RibD n=3 Tax=Nostocaceae TaxID=1162 RepID=A0A367Q305_9NOSO) HSP 1 Score: 215 bits (548), Expect = 4.710e-59 Identity = 140/347 (40.35%), Postives = 187/347 (53.89%), Query Frame = 2
Query: 188 GAERDSACMRRALELAARGLGRTRPNPAVGCVIVDKNGVVVGEGFHPRAGEPHAEVWAIRQAKDRARGGTAYVTLEPCNHFGRTPPCTTALVDSGILRVVAGMVDPDPRTAGGGLKRLAERGLDVSVGVEAAACQTLNSPFAHRIWEKSCYGVLHCSLGGVDSSELEDTCQEAALTLLPA---YHSYKEHDAIVVEGCSGVAKLEACLES--LPSTTLLVVVVTSAGGIEEELGPVSESRLWEDPTDGSVLVVAVSEGNEKSPGPIRTRLASRGVGIVEF-SLPPEQPQQRLPSVVGQTSLASAQEVAAAAVSRELYRRGMLSAAWDVGPGLATKALKGGHIQRVLV 1210
G++ DS MRR LELA R LGRT PNP VG V+V KNG +VGEGFHPRAGEPHAEV+A+R A DRARG T YV+LEPCNH+GRTPPC+ L+ +G+ +VV GMVDP+P AGGG+ RL G++V VGVE ACQ LN F HRI K G+L ++ +D + A +T A H + V+ G + V + L S L + L VV++ + E +RLW+ ++++ V + + L +GV +VE SL PE + LY RG SA W+ G LA A+ G +Q++L
Sbjct: 33 GSDFDSLMMRRCLELARRALGRTSPNPLVGAVVV-KNGEIVGEGFHPRAGEPHAEVFALRAAGDRARGATVYVSLEPCNHYGRTPPCSEGLISAGVAKVVVGMVDPNPLVAGGGIARLRAAGVEVVVGVETEACQQLNEAFVHRILHKRPLGILKYAMT-LDGKIATTSGHSAWITNQDARVEVHQLRAACDAVIVGGNTVRQDNPYLTSHQLGAHNPLRVVMSRHLNLPEN------ARLWQTAEAPTLVLTEVGANPD-----FQKFLLKQGVEVVELTSLTPES------------------------ATIHLYERGFCSALWECGGTLAASAIAQGAVQKILA 342
BLAST of mRNA_H-elongata_contig6548.14130.1 vs. uniprot
Match: A0A2T1ELP6_9CYAN (Riboflavin biosynthesis protein RibD n=1 Tax=Stenomitos frigidus ULC18 TaxID=2107698 RepID=A0A2T1ELP6_9CYAN) HSP 1 Score: 214 bits (544), Expect = 7.260e-59 Identity = 133/339 (39.23%), Postives = 185/339 (54.57%), Query Frame = 2
Query: 200 DSACMRRALELAARGLGRTRPNPAVGCVIVDKNGVVVGEGFHPRAGEPHAEVWAIRQAKDRARGGTAYVTLEPCNHFGRTPPCTTALVDSGILRVVAGMVDPDPRTAGGGLKRLAERGLDVSVGVEAAACQTLNSPFAHRIWEKSCYGVLH--CSLGGVDSSELEDTCQEAALTLLPAYHSYKEHDAIVVEGCSGVAKLEACLESLPSTTLLVVVVTSAGGIEEELGPVSESRLWEDPTDGSVLVVAVSEGNEKSPGPIRTRLASRGVGIVEFSLPPEQPQQRLPSVVGQTSLASAQEVAAAAVSRELYRRGMLSAAWDVGPGLATKALKGGHIQRVLV 1210
D A M+R L+LA R LGRT PNP VG VIV + G +VGEGFHP AG+PHAEV+A+R A DRAR T YV LEPCNH+GRTPPC+ A+V +G+ RVV GMVDPDPR AGGG+ RL + G+ V+VG+E AAC+ LN F HRI +G+L +L G ++ + T H + V+ G + V + L S T L VV++ + L ++++LW+ + + + K+ ++ L +GV ++E + P P AAV + LY G LS W+ G LA +A+ G +Q+VL
Sbjct: 9 DRAMMQRCLDLARRALGRTAPNPLVGSVIVQE-GAIVGEGFHPAAGQPHAEVFALRAAGDRARNATLYVNLEPCNHYGRTPPCSEAIVAAGLQRVVVGMVDPDPRVAGGGIARLRQAGIAVTVGIEEAACRKLNEAFVHRILHHRPFGILKYAMTLDGKIATTTGHSAWVTGPTARAEVHQLRAACDAVIVGGNTVRRDNPLLTSRQEHTPLRVVMSRS------LDLPTDAQLWD-----TAIAPTLVFTEAKAQSDVQQALMQQGVEVIEST--PLTP---------------------AAVMKYLYDSGCLSVLWECGGTLAARAIADGAVQKVLA 312
BLAST of mRNA_H-elongata_contig6548.14130.1 vs. uniprot
Match: UPI001F022A81 (bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD n=1 Tax=Leptodesmis sichuanensis TaxID=2906798 RepID=UPI001F022A81) HSP 1 Score: 213 bits (541), Expect = 1.730e-58 Identity = 131/341 (38.42%), Postives = 190/341 (55.72%), Query Frame = 2
Query: 200 DSACMRRALELAARGLGRTRPNPAVGCVIVDKNGVVVGEGFHPRAGEPHAEVWAIRQAKDRARGGTAYVTLEPCNHFGRTPPCTTALVDSGILRVVAGMVDPDPRTAGGGLKRLAERGLDVSVGVEAAACQTLNSPFAHRIWEKSCYGVLHCSLGGVDSSELEDTCQEAALTLLPA---YHSYKEH-DAIVVEGCSGVAKLEACLESLPSTTLLVVVVTSAGGIEEELGPVSESRLWEDPTDGSVLVVAVSEGNEKSPGPIRTRLASRGVGIVEFSLPPEQPQQRLPSVVGQTSLASAQEVAAAAVSRELYRRGMLSAAWDVGPGLATKALKGGHIQRVLV 1210
D M+R LELA +GLG+T PNP VG V+V ++G +VGEGFHP+AGEPHAEV+A+RQA DRA+G T YV LEPCNH+GRTPPC+ A++ +G+ RVV GM+DP+P+ AG G+ RL E G++V+VGVEAAACQ LN F HRI + +G+L ++ +D T A +T PA H + DAI+V G + P+ T L V+++ + + ++ + +W +++ E + +L +GV +VE + + A V LY RG L+ W+ G LA +A+ G +Q+VL
Sbjct: 4 DRQMMQRCLELARQGLGKTAPNPLVGSVVV-RDGEIVGEGFHPKAGEPHAEVFALRQAGDRAQGATLYVNLEPCNHYGRTPPCSEAIIAAGVQRVVVGMIDPNPQVAGTGIARLREAGIEVTVGVEAAACQELNEAFVHRILYRRPFGILKYAMT-LDGKIAAVTRHSAWVTSEPARTEVHKLRAACDAIIVGGNTLRQDDPLLTSRQPNRTPLRVIMSRSLDLPQQ------ANVWNTVVASTLVFTRPGVRPE-----FQQQLRQQGVEVVER-----------------------EPLTPATVMANLYDRGFLTVLWECGGTLAARAIADGAVQKVLA 308
BLAST of mRNA_H-elongata_contig6548.14130.1 vs. uniprot
Match: UPI0016879C2C (bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD n=1 Tax=Microcoleus sp. FACHB-831 TaxID=2692827 RepID=UPI0016879C2C) HSP 1 Score: 213 bits (542), Expect = 2.100e-58 Identity = 138/341 (40.47%), Postives = 187/341 (54.84%), Query Frame = 2
Query: 200 DSACMRRALELAARGLGRTRPNPAVGCVIVDKNGVVVGEGFHPRAGEPHAEVWAIRQAKDRARGGTAYVTLEPCNHFGRTPPCTTALVDSGILRVVAGMVDPDPRTAGGGLKRLAERGLDVSVGVEAAACQTLNSPFAHRIWEKSCYGVLHCSLGGVDSSELEDTCQEAALTLLPA---YHSYKEH-DAIVVEGCSGVAKLEACLESLPSTTLLVVVVTSAGGIEEELGPVSESRLWEDPTDGSVLVVAVSEGNEKSPGPIRTRLASRGVGIVEFSLPPEQPQQRLPSVVGQTSLASAQEVAAAAVSRELYRRGMLSAAWDVGPGLATKALKGGHIQRVLV 1210
D A M+R +ELA R LGRT PNP VG VIV ++G +VGEGFHP AG PHAEV+A+R A DRA G T YV LEPCNH+GRTPPC+ ALV +G+ +VV GMVDP+P AGGG++RL + G++V VGVE AC+ LN F HRI K +G+L ++ +D T A ++ L A HS + DA++V G + + + VV S L SE+ LWE TD + +V G+ + LA +GV +VE + P P++ + LY RG+LS W+ G LA A+ G +Q++L
Sbjct: 23 DRAMMQRCIELAKRALGRTAPNPLVGSVIV-QDGKIVGEGFHPGAGNPHAEVFALRDAGDRALGATIYVNLEPCNHYGRTPPCSEALVAAGVAKVVVGMVDPNPLVAGGGIERLKQAGIEVVVGVEEDACKQLNEAFIHRILYKQPFGILKYAMT-LDGKIATTTGHSAWISSLEARNEVHSLRSACDAVIVGGNTVLLDNPHLTSHQKDARNPLRVVMS-----RSLNLPSEAHLWE--TDEASTLVLTEPGSSPD---FQQMLAKKGVEVVELN--PLTPKKAM---------------------AYLYDRGLLSVLWECGGTLAASAIAEGAVQKILA 328 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6548.14130.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig6548.14130.1 >prot_H-elongata_contig6548.14130.1 ID=prot_H-elongata_contig6548.14130.1|Name=mRNA_H-elongata_contig6548.14130.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=480bp MGGGGAGETGKSGDGEGSMIGKSALGATGAERDSACMRRALELAARGLGRback to top mRNA from alignment at H-elongata_contig6548:313..6994- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig6548.14130.1 ID=mRNA_H-elongata_contig6548.14130.1|Name=mRNA_H-elongata_contig6548.14130.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6682bp|location=Sequence derived from alignment at H-elongata_contig6548:313..6994- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig6548:313..6994- >mRNA_H-elongata_contig6548.14130.1 ID=mRNA_H-elongata_contig6548.14130.1|Name=mRNA_H-elongata_contig6548.14130.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2880bp|location=Sequence derived from alignment at H-elongata_contig6548:313..6994- (Himanthalia elongata Himel1 dioecious)back to top |