mRNA_H-elongata_contig65027.14091.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig65027.14091.1
Unique NamemRNA_H-elongata_contig65027.14091.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig65027.14091.1 vs. uniprot
Match: D7G0N7_ECTSI (Fructose-bisphosphate aldolase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0N7_ECTSI)

HSP 1 Score: 440 bits (1132), Expect = 9.940e-153
Identity = 230/283 (81.27%), Postives = 254/283 (89.75%), Query Frame = 1
Query:    1 IGKRLVGAGLTNDAETRRAYREVLLAHPRLGEWLTGAILFEETLLQGNGEGVLFVEVLRAKGIVPGVKTDKGLEPIPESPRESTTRGLDTLLHRSRSYYQQGARFAKWRATIRIDADAGLPTRGAILANAKGLAQYAAISQVAGLTPIVEPEILIEGTHSPELFAEVSERVLGAVYGALSEAGVFLEGTILKSQMIMAGVDAPEK-ATPSLTAELTLQTLRRRLPPAVPGVVFLSGGQSEEEATVNLNLINKLAKDDVDGRRQHPWVLSFSFGRSLQASVLKV 846
            IGKRL  AGLTNDAETRR YREVLLAHP++GEWL GAILFEETL Q N +GV F +VL+ KG++ GVKTDKGL PIP SPRE+TTRG+DTLL RS+ YYQQGARFAKWRATIRIDA+AGLPTRGAI ANA GLA+YAA+SQ AGLTPIVEPEILIEGTHSPELFAEVSERVLGAVYGALSEAGVFLEGT+LK QMIMAGVDAPEK A+ +LTAELTL+TLRRR+PPAVPGV FLSGGQSEE+ATVNL+LIN+ A  +  GRR +PW +SFSFGRSLQASVLKV
Sbjct:   46 IGKRLEAAGLTNDAETRRRYREVLLAHPQIGEWLAGAILFEETLGQANSDGVAFPQVLKDKGVLTGVKTDKGLAPIPGSPRETTTRGMDTLLARSKGYYQQGARFAKWRATIRIDAEAGLPTRGAIHANAVGLARYAALSQAAGLTPIVEPEILIEGTHSPELFAEVSERVLGAVYGALSEAGVFLEGTLLKPQMIMAGVDAPEKKASSALTAELTLRTLRRRVPPAVPGVFFLSGGQSEEDATVNLDLINRTAAAEDAGRR-YPWTMSFSFGRSLQASVLKV 327          
BLAST of mRNA_H-elongata_contig65027.14091.1 vs. uniprot
Match: A0A835Z9U9_9STRA (Fructose-bisphosphate aldolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9U9_9STRA)

HSP 1 Score: 332 bits (851), Expect = 9.690e-109
Identity = 184/290 (63.45%), Postives = 214/290 (73.79%), Query Frame = 1
Query:    1 IGKRLVGAGLTNDAETRRAYREVLLAHPRLGEWLTGAILFEETLLQGNGEGVLFVEVLRAKGIVPGVKTDKGLEPIPESPRESTTRGLDTLLHRSRSYYQQGARFAKWRATIRIDADAGLPTRGAILANAKGLAQYAAISQV--AGLTPIVEPEILIEGTHSPELFAEVSERVLGAVYGALSEAGVFLEGTILKSQMIMAGVDAPEKATPSLTAELTLQTLRRRLPPAVPGVVFLSGGQSEEEATVNLNLINKLAKDDVDG------RRQHPWVLSFSFGRSLQASVLKV 846
            IGKRLV AGL ND ETRR YREVLL+HP LG++L GAIL EETL Q + +G  FV+VL  KG++ GVKTD+GL+P+ +SP E+ T G+  LL RSR Y  +GARFAKWRA +R+DA AG PT  A+  NA  LAQYAA+SQ   AGL PIVEPE+LIEGTHS   FA  +E +LG VY AL++A V LEGT+LK QM MAG+ AP K T      LTL  LRRR+PPAVPGVVFLSGGQSEEEAT NLN I + A   V G      RR+HPW LSFSFGRSLQASVL+V
Sbjct:  110 IGKRLVKAGLQNDFETRRGYREVLLSHPDLGQYLAGAILHEETLDQVHSDGRTFVQVLSDKGVLVGVKTDRGLQPLIQSPTETQTLGMGDLLERSRRYRAKGARFAKWRAVLRLDAAAGTPTDAALALNAAQLAQYAALSQASAAGLVPIVEPELLIEGTHSAAEFAACTEVILGEVYAALAKAQVHLEGTLLKPQMAMAGIGAPSKHTREELVALTLAALRRRVPPAVPGVVFLSGGQSEEEATGNLNAIARAAGVGVAGAEGEALRRRHPWSLSFSFGRSLQASVLQV 399          
BLAST of mRNA_H-elongata_contig65027.14091.1 vs. uniprot
Match: W7TWP2_9STRA (Fructose-bisphosphate aldolase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TWP2_9STRA)

HSP 1 Score: 327 bits (837), Expect = 7.510e-107
Identity = 178/289 (61.59%), Postives = 211/289 (73.01%), Query Frame = 1
Query:    1 IGKRLVGAGLTNDAETRRAYREVLLAHPRLGEWLTGAILFEETLLQG---NGEGVLFVEVLRAKGIVPGVKTDKGLEPIPESPRESTTRGLDTLLHRSRSYYQQGARFAKWRATIRIDADAGLPTRGAILANAKGLAQYAAISQVAGLTPIVEPEILIEGTHSPELFAEVSERVLGAVYGALSEAGVFLEGTILKSQMIMAGVDAPEKATP--SLTAELTLQTLRRRLPPAVPGVVFLSGGQSEEEATVNLNLINKLAKDDVDGRRQH----PWVLSFSFGRSLQASVL 840
            +GKRLV AGL ND ETRRAYREVL +HP LGE+L+GAILF ETL Q    + EG LF  +L++KG++PGVK D GLEP+  S RE+ T+G++ L+ R + +Y QGARFAKWRA IRID  A LPTR  +  N+  LA+YAA  Q  GL PIVEPEILIEG HS E FA V+E  L  VY  L++A VFLEGT+LK QMIM GVD+P +  P     A  TL+ LRRR+PPAVPGVVFLSGGQ+EE+AT NLNLIN+LAK      R      PW+LSFSFGRSLQASVL
Sbjct:   92 LGKRLVAAGLVNDEETRRAYREVLFSHPDLGEYLSGAILFSETLGQKAVKDAEGRLFPALLQSKGVLPGVKVDLGLEPLEYSARETHTKGMNDLMERCQEFYAQGARFAKWRAVIRIDEAANLPTRACMQINSAELARYAATCQACGLVPIVEPEILIEGAHSAETFARVTEAALSEVYYTLAQAKVFLEGTLLKPQMIMPGVDSPSEGRPRPEEAARRTLEALRRRVPPAVPGVVFLSGGQTEEQATQNLNLINQLAKRPASPFRPSSTTCPWILSFSFGRSLQASVL 380          
BLAST of mRNA_H-elongata_contig65027.14091.1 vs. uniprot
Match: A0A1Y1HS79_KLENI (Fructose-bisphosphate aldolase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HS79_KLENI)

HSP 1 Score: 297 bits (761), Expect = 1.130e-96
Identity = 160/282 (56.74%), Postives = 202/282 (71.63%), Query Frame = 1
Query:    1 IGKRLVGAGLTNDAETRRAYREVLLAHPRLGEWLTGAILFEETLLQGNGEGVLFVEVLRAKGIVPGVKTDKGLEPIPESPRESTTRGLDTLLHRSRSYYQQGARFAKWRATIRIDADAGLPTRGAILANAKGLAQYAAISQVAGLTPIVEPEILIEGTHSPELFAEVSERVLGAVYGALSEAGVFLEGTILKSQMIMAGVDAPEKATPSLTAELTLQTLRRRLPPAVPGVVFLSGGQSEEEATVNLNLINKLAKDDVDGRRQHPWVLSFSFGRSLQASVLKV 846
            +GKRL   GL N    R+A+RE+L   P +G++L+GAILF ETL Q    G  FV+VL   GI+PG+K D GL PIP +  E++T GLD L +RSR+YY+QGARFAKWRA ++I A+  LP+  AI  NA+ LA+YA+I Q +GL PIVEPEILI+G H+ E  AEV+ERV  AV  AL E  V LEG +LK QMI+ G ++P+KA+P   A  TL+TLRR +PPAVPGV+FLSGGQSE+EATVNLN +N LA          PW LSFSFGR+LQAS L++
Sbjct:   34 VGKRLQSVGLDNTEANRQAFREMLYTTPGIGQYLSGAILFHETLFQSTANGTPFVKVLGEAGILPGIKVDVGLVPIPGTDGETSTLGLDDLTNRSRAYYEQGARFAKWRAVLKIGAN--LPSSLAIAMNARDLARYASICQQSGLVPIVEPEILIDGDHTLERSAEVAERVFAAVVAALHEHRVCLEGILLKPQMILPGAESPQKASPEEIAAATLRTLRRTIPPAVPGVMFLSGGQSEQEATVNLNTLNSLALQTGGA----PWTLSFSFGRALQASPLRI 309          
BLAST of mRNA_H-elongata_contig65027.14091.1 vs. uniprot
Match: I0Z355_COCSC (Fructose-bisphosphate aldolase n=2 Tax=Coccomyxa TaxID=41891 RepID=I0Z355_COCSC)

HSP 1 Score: 279 bits (714), Expect = 1.480e-89
Identity = 154/281 (54.80%), Postives = 198/281 (70.46%), Query Frame = 1
Query:    1 IGKRLVGAGLTNDAETRRAYREVLLAHPRLGEWLTGAILFEETLLQGNGEGVLFVEVLRAKGIVPGVKTDKGLEPIPESPRESTTRGLDTLLHRSRSYYQQGARFAKWRATIRIDADAGLPTRGAILANAKGLAQYAAISQVAGLTPIVEPEILIEGTHSPELFAEVSERVLGAVYGALSEAGVFLEGTILKSQMIMAGVDAPEKATPSLTAELTLQTLRRRLPPAVPGVVFLSGGQSEEEATVNLNLINKLAKDDVDGRRQHPWVLSFSFGRSLQASVLK 843
            IGKRL   G+ N+ + RR  R +L   P + + ++G ILFEETL Q   +G  FV+VL++KGI+PG+K DKG+ P+P++  E+TT+GLD L  R   YY+QGARFAKWRA ++I A A  P   AI  NA GLA+YA+I Q  GL PIVEPEIL +GTHS E+    +ERVL AVY ALS+  V LEGT+LK  M+ AG+DA   +T  + A  T+Q L+R +PPAV GVVFLSGGQSEE+A+VNL+ +NKL      GR+  PW LSFS+GR+LQAS LK
Sbjct:   42 IGKRLSSIGVPNEEDHRRTLRHLLFTAPGVEDHISGVILFEETLYQSGSDGTPFVDVLKSKGIIPGIKVDKGVVPLPDTDGETTTQGLDDLGKRCAKYYEQGARFAKWRAVLKISATAPSPL--AIHENAYGLARYASICQENGLVPIVEPEILTDGTHSIEVCQAATERVLAAVYKALSDHKVLLEGTLLKPNMVSAGIDAKPASTAEI-AGATVQALQRTVPPAVAGVVFLSGGQSEEDASVNLDAMNKLP-----GRK--PWALSFSYGRALQASALK 312          
BLAST of mRNA_H-elongata_contig65027.14091.1 vs. uniprot
Match: A0A2V3IJD6_9FLOR (Fructose-bisphosphate aldolase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJD6_9FLOR)

HSP 1 Score: 279 bits (714), Expect = 1.680e-89
Identity = 152/284 (53.52%), Postives = 195/284 (68.66%), Query Frame = 1
Query:    1 IGKRLVGAGLTNDAETRRAYREVLLAHPRLGEWLTGAILFEETLLQGNGEGVLFVEVLRAKGIVPGVKTDKGLEPIPESPRESTTRGLDTLLHRSRSYYQQGARFAKWRATIRIDADAGLPTRGAILANAKGLAQYAAISQVAGLTPIVEPEILIEGTHSPELFAEVSERVLGAVYGALSEAGVFLEGTILKSQMIMAGVDAPEK--ATPSLTAELTLQTLRRRLPPAVPGVVFLSGGQSEEEATVNLNLINKLAKDDVDGRRQHPWVLSFSFGRSLQASVLKV 846
            IGKRL    L N  ETRRA RE+L+  P   E  +G ILF+ETL Q +  G  FV +L+ K I+PG+K D GL+P+PESP E+TT GL+ L +R  SYY QGARFAKWRA +RID + GLP+   +  NA+ LA YAA +Q  GL PIVEPEILI+GTH  E+ A V+ERV+ AVY AL E  V +E T+LK  MIM GV + E+   TP + A  TL+ +++ +P  VPG++FLSGG SEEEAT NLN +N LA+     + + PW LSFSFGR+LQ S +K+
Sbjct:   34 IGKRLAILSLENTPETRRALREMLVCAPGNDEAYSGMILFQETLYQTDSSGKPFVSILKEKNILPGIKVDTGLKPVPESPGETTTDGLEDLSNRCASYYAQGARFAKWRAALRIDVNRGLPSDSVVHENARELATYAATAQSEGLLPIVEPEILIDGTHGQEVSAAVAERVISAVYDALREQNVPVELTLLKPMMIMPGVSSEERKNVTPDIVAVETLRVMKKVVPEQVPGIMFLSGGMSEEEATKNLNALNILAE-----KEKAPWSLSFSFGRALQHSAMKI 312          
BLAST of mRNA_H-elongata_contig65027.14091.1 vs. uniprot
Match: A0A0G4F0H8_VITBC (Fructose-bisphosphate aldolase n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4F0H8_VITBC)

HSP 1 Score: 280 bits (716), Expect = 3.470e-89
Identity = 150/282 (53.19%), Postives = 195/282 (69.15%), Query Frame = 1
Query:    1 IGKRLVGAGLTNDAETRRAYREVLLAHPRLGEWLTGAILFEETLLQGNGEGVLFVEVLRAKGIVPGVKTDKGLEPIPES-PRESTTRGLDTLLHRSRSYYQQGARFAKWRATIRIDADAGLPTRGAILANAKGLAQYAAISQVAGLTPIVEPEILIEGTHSPELFAEVSERVLGAVYGALSEAGVFLEGTILKSQMIMAGVDAPEKATPSLTAELTLQTLRRRLPPAVPGVVFLSGGQSEEEATVNLNLINKLAKDDVDGRRQHPWVLSFSFGRSLQASVLK 843
            IGKRL   G+ N  E R+AYR +L   P LGE+++GAIL+EETL Q + +G  FV+ LR  G++PG+K D GL P+P + P E+   GLD L  R+  YY QGARFAKWRA ++I  D G PT  AI  NA GLA+YA   Q AGL PIVEPEIL++G H+ E  AEV E++L  VY ALS+  VFLEGT+LK  M ++G D P+  TP + AE TL+TL R +P AVPG++FLSGG SEEEA++NLN++N+         R+ PW ++FS+GR+LQ S LK
Sbjct:   93 IGKRLASIGVENTEEARQAYRGLLFTTPGLGEYISGAILYEETLYQNHADGTPFVDCLRNIGVIPGIKVDTGLTPLPGAHPIETWCTGLDGLYERACKYYTQGARFAKWRAVLQITPD-GCPTPLAIKENAWGLARYARAVQEAGLVPIVEPEILMDGDHTIEKTAEVQEKILAEVYKALSDNNVFLEGTLLKPSMTVSGADCPDTITPDMIAEYTLRTLERTVPSAVPGIMFLSGGMSEEEASINLNVMNQKP-------RKGPWSVAFSYGRALQQSCLK 366          
BLAST of mRNA_H-elongata_contig65027.14091.1 vs. uniprot
Match: A0A383VHS7_TETOB (Fructose-bisphosphate aldolase n=2 Tax=Scenedesmaceae TaxID=3086 RepID=A0A383VHS7_TETOB)

HSP 1 Score: 278 bits (710), Expect = 1.070e-88
Identity = 152/286 (53.15%), Postives = 194/286 (67.83%), Query Frame = 1
Query:    1 IGKRLVGAGLTNDAETRRAYREVLLAHPRLGEWLTGAILFEETLLQGNGEGVLFVEVLRAKGIVPGVKTDKGLEPIPE---SPRESTTRGLDTLLHRSRSYYQQGARFAKWRATIRIDADAGLPTRGAILANAKGLAQYAAISQVAGLTPIVEPEILIEGTHSPELFAEVSERVLGAVYGALSEAGVFLEGTILKSQMIMAGVDAPE-KATPSLTAELTLQTLRRRLPPAVPGVVFLSGGQSEEEATVNLNLINKLAKDDVDGRRQHPWVLSFSFGRSLQASVLKV 846
            IGKRL  AGL ND ETRRAYRE+    P     ++GAI+F+ETL Q   +G  FV+ L  +G++PG+K D+GL P      +  E++TRGLDTL   +  Y Q GARFAKWRA +R+DA  G P+  A+  NA+ LAQYAA+ Q AGL PIVEPE+LI+GTHS   F   SERV+GA    L   GV LEG +LK QM++ G DA   +A P   A  TL  +RR +P A+PG++FLSGGQSEEEAT+NLN IN +A+     + + PW LSFS+GR+LQASVLK+
Sbjct:   34 IGKRLEKAGLVNDEETRRAYRELFYTAPIGKAGISGAIMFKETLQQAAADGTSFVDCLTRQGVMPGIKVDEGLLPFEGHDLATGETSTRGLDTLAAAAAGYRQGGARFAKWRAALRVDASRGFPSERAVELNAQQLAQYAAVCQAAGLVPIVEPEVLIDGTHSAAEFGAASERVIGATVAQLWRQGVALEGCLLKPQMVIKGADAAGGRAAPEEVAAATLTVMRRVVPAAIPGIMFLSGGQSEEEATLNLNAINVMAQQ----QGKAPWSLSFSYGRALQASVLKI 315          
BLAST of mRNA_H-elongata_contig65027.14091.1 vs. uniprot
Match: W7TFC8_9STRA (Fructose-bisphosphate aldolase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TFC8_9STRA)

HSP 1 Score: 276 bits (706), Expect = 9.610e-88
Identity = 148/282 (52.48%), Postives = 193/282 (68.44%), Query Frame = 1
Query:    1 IGKRLVGAGLTNDAETRRAYREVLLAHPRLGEWLTGAILFEETLLQGNGEGVLFVEVLRAKGIVPGVKTDKGLEPIPES-PRESTTRGLDTLLHRSRSYYQQGARFAKWRATIRIDADAGLPTRGAILANAKGLAQYAAISQVAGLTPIVEPEILIEGTHSPELFAEVSERVLGAVYGALSEAGVFLEGTILKSQMIMAGVDAPEKATPSLTAELTLQTLRRRLPPAVPGVVFLSGGQSEEEATVNLNLINKLAKDDVDGRRQHPWVLSFSFGRSLQASVLK 843
            IGKRL   G+ N    R+AYR +L   P+LG++++GAIL+EETL Q N +G  FV+ L + G++PG+K D GL P+P   P E+   GLD L+ R++ YY QGARFAKWRA ++I +D G P+  +I  NA GLA+YA   Q  GL PIVEPEIL++G H+ +  A V ERVL AVY ALS+ GVFLEG++LK  M + G D  E  TP   AE T++TL R +P +VPGV+FLSGG SEEEA++NLN +NK         R+ PW LSFS+GR+LQ S LK
Sbjct:   88 IGKRLQSIGVENTEANRQAYRGLLFTTPKLGDFISGAILYEETLFQNNVDGTPFVKNLASVGVIPGIKVDMGLSPLPGGHPVETWCTGLDGLVERAQKYYAQGARFAKWRAVLQITSD-GAPSELSIQENAWGLARYARAVQEGGLVPIVEPEILMDGDHNIDTTARVQERVLAAVYKALSDNGVFLEGSLLKPSMTLPGADCGESVTPEKIAEYTVRTLERHVPSSVPGVMFLSGGMSEEEASINLNALNKR-------ERKGPWSLSFSYGRALQQSCLK 361          
BLAST of mRNA_H-elongata_contig65027.14091.1 vs. uniprot
Match: A0A5J4YA60_9CHLO (Fructose-bisphosphate aldolase n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4YA60_9CHLO)

HSP 1 Score: 274 bits (701), Expect = 1.240e-87
Identity = 152/281 (54.09%), Postives = 193/281 (68.68%), Query Frame = 1
Query:    1 IGKRLVGAGLTNDAETRRAYREVLLAHPRLGEWLTGAILFEETLLQGNGEGVLFVEVLRAKGIVPGVKTDKGLEPIPESPRESTTRGLDTLLHRSRSYYQQGARFAKWRATIRIDADAGLPTRGAILANAKGLAQYAAISQVAGLTPIVEPEILIEGTHSPELFAEVSERVLGAVYGALSEAGVFLEGTILKSQMIMAGVDAPEKATPSLTAELTLQTLRRRLPPAVPGVVFLSGGQSEEEATVNLNLINKLAKDDVDGRRQHPWVLSFSFGRSLQASVLK 843
            IGKRL   GL ND   RRA RE+L   P +  +++G I+FEETL Q   +G LFVE L+ KGI+PG+K DKG+  +P +  E+TT+GLD L  R   YYQ GARFAKWRA ++ID  +  P+  AI  NA GLA+YA I Q  GL PIVEPEIL +GTH      EV+E+VL AVY ALS+  V LEGT+LK  M++AGV   ++A P   A LT++ L+R +P AVPGVVFLSGGQSEE+ATV+LN +N++         + PW LSFS+GR+LQAS LK
Sbjct:   44 IGKRLSSIGLDNDETNRRALREMLFTAPEVERFISGVIMFEETLFQRGSDGKLFVETLKIKGILPGIKVDKGVMKLPGTSEETTTQGLDDLGKRCADYYQAGARFAKWRAVLKIDDSS--PSELAIHENAYGLARYAVICQENGLVPIVEPEILTDGTHDIGRCVEVTEQVLAAVYKALSDHKVLLEGTLLKPNMVLAGVSG-QQARPDDAAMLTVRALQRTVPAAVPGVVFLSGGQSEEDATVHLNAMNQIPT-------KRPWNLSFSYGRALQASALK 314          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig65027.14091.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0N7_ECTSI9.940e-15381.27Fructose-bisphosphate aldolase n=2 Tax=Ectocarpus ... [more]
A0A835Z9U9_9STRA9.690e-10963.45Fructose-bisphosphate aldolase n=1 Tax=Tribonema m... [more]
W7TWP2_9STRA7.510e-10761.59Fructose-bisphosphate aldolase n=3 Tax=Monodopsida... [more]
A0A1Y1HS79_KLENI1.130e-9656.74Fructose-bisphosphate aldolase n=1 Tax=Klebsormidi... [more]
I0Z355_COCSC1.480e-8954.80Fructose-bisphosphate aldolase n=2 Tax=Coccomyxa T... [more]
A0A2V3IJD6_9FLOR1.680e-8953.52Fructose-bisphosphate aldolase n=1 Tax=Gracilariop... [more]
A0A0G4F0H8_VITBC3.470e-8953.19Fructose-bisphosphate aldolase n=1 Tax=Vitrella br... [more]
A0A383VHS7_TETOB1.070e-8853.15Fructose-bisphosphate aldolase n=2 Tax=Scenedesmac... [more]
W7TFC8_9STRA9.610e-8852.48Fructose-bisphosphate aldolase n=2 Tax=Monodopsida... [more]
A0A5J4YA60_9CHLO1.240e-8754.09Fructose-bisphosphate aldolase n=1 Tax=Trebouxia s... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig65027contigH-elongata_contig65027:193..3371 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score282.7
Seed ortholog evalue1.9e-73
Seed eggNOG ortholog248742.XP_005649618.1
KEGG rclassRC00438,RC00439,RC00603,RC00604
KEGG koko:K01623
KEGG ReactionR01068,R01070,R01829,R02568
KEGG Pathwayko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230
KEGG ModuleM00001,M00003,M00165,M00167
EggNOG free text desc.Belongs to the class I fructose-bisphosphate aldolase family
EggNOG OGs34J9R@3041,37KBJ@33090,COG3588@1,KOG1557@2759
EC4.1.2.13
COG Functional cat.G
Best tax levelChlorophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03036,ko04131,ko04147
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionfructose-1,6-bisphosphate aldolase
Ec32 orthologEc-14_001680.1
Exons4
Model size846
Cds size846
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig65027.14091.1prot_H-elongata_contig65027.14091.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig65027 193..3371 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931036.3353736-CDS-H-elongata_contig65027:192..4231622931036.3353736-CDS-H-elongata_contig65027:192..423Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig65027 193..423 -
1691679671.4541085-CDS-H-elongata_contig65027:192..4231691679671.4541085-CDS-H-elongata_contig65027:192..423Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig65027 193..423 -
1622931036.3546202-CDS-H-elongata_contig65027:1340..14571622931036.3546202-CDS-H-elongata_contig65027:1340..1457Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig65027 1341..1457 -
1691679671.4695034-CDS-H-elongata_contig65027:1340..14571691679671.4695034-CDS-H-elongata_contig65027:1340..1457Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig65027 1341..1457 -
1622931036.3669977-CDS-H-elongata_contig65027:2030..22051622931036.3669977-CDS-H-elongata_contig65027:2030..2205Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig65027 2031..2205 -
1691679671.4814944-CDS-H-elongata_contig65027:2030..22051691679671.4814944-CDS-H-elongata_contig65027:2030..2205Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig65027 2031..2205 -
1622931036.380742-CDS-H-elongata_contig65027:3048..33711622931036.380742-CDS-H-elongata_contig65027:3048..3371Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig65027 3049..3371 -
1691679671.5023532-CDS-H-elongata_contig65027:3048..33711691679671.5023532-CDS-H-elongata_contig65027:3048..3371Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig65027 3049..3371 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig65027.14091.1

>prot_H-elongata_contig65027.14091.1 ID=prot_H-elongata_contig65027.14091.1|Name=mRNA_H-elongata_contig65027.14091.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=282bp
IGKRLVGAGLTNDAETRRAYREVLLAHPRLGEWLTGAILFEETLLQGNGE
GVLFVEVLRAKGIVPGVKTDKGLEPIPESPRESTTRGLDTLLHRSRSYYQ
QGARFAKWRATIRIDADAGLPTRGAILANAKGLAQYAAISQVAGLTPIVE
PEILIEGTHSPELFAEVSERVLGAVYGALSEAGVFLEGTILKSQMIMAGV
DAPEKATPSLTAELTLQTLRRRLPPAVPGVVFLSGGQSEEEATVNLNLIN
KLAKDDVDGRRQHPWVLSFSFGRSLQASVLKV
back to top

mRNA from alignment at H-elongata_contig65027:193..3371-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig65027.14091.1 ID=mRNA_H-elongata_contig65027.14091.1|Name=mRNA_H-elongata_contig65027.14091.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3179bp|location=Sequence derived from alignment at H-elongata_contig65027:193..3371- (Himanthalia elongata Himel1 dioecious)
ATCGGCAAGCGCTTGGTAGGGGCGGGCCTCACCAACGATGCGGAGACTCG CCGCGCGTACCGTGAAGTGTTATTGGCCCACCCACGCTTGGGGGAGTGGC TGACAGGCGCTATTCTATTCGAGGAGACGCTGCTGCAGGGCAACGGTGAG GGCGTGCTATTCGTGGAAGTGTTGCGGGCGAAGGGGATTGTGCCGGGGGT CAAGACAGACAAAGGACTGGAGCCCATCCCCGAGAGCCCGCGAGAGTCCA CTACGAGAGGGTTGGACACGCTGTTGCATAGGAGCAGGAGTTACTACCAA CAGGGCGCGCGCTTCGCCAAGTGGTGAGGGTGGGCGGGAACAGGGCATGG GGAATACTTGAGATGTTTTGGGGTGATTATATTTCTGGTTTCGATCATTT ATGGGCAACATTATAACGGGTGGGGATTAGGTTCATACACCGTACGTTCT CTATTCTCAACCTTTGTCATGGTGAAATGTCTTTAGAGGGAGAGTGGAGT TTAGGAACGGGGTGGATGGTTGGCGGGGGGGGGGTTCCGTGATTCGGTGA TGATTTGCCGCAGAGGGCATCAGTTGCGTCTGACAAGTCTGAAGCAACCT GAGCTCAGAATCCGAAGTTGTATGACTCTGCCTTCGAGGATTTGTTTTTG ATAAATGTTTCTCCCGATTCAACCTTTCAACGTGCTTGGCTACTATAATC TATAATAATTTCACCAGCCTCAACCATGCCCATCCCACCCGCGGCCCTAA GGGATTGCAACCAACCTCTTCCGGCTTGACGTTTTCTGGCACGCTTTGAA TTAATTGCGATCCAAGTTCGGTACTTCCACATCCCGTCAACCTGTTGCTG AACTTCGCTTACTCATGATGTCACCCCTGCCGGACGGCATGCCTTGTTTA GTCGCTCAGTAAAACGTATCAGCAATCAAATAATAATGTAAACTAAACTA AAATATAAAATAGTCAAAACATGCCCGATGCCACACCTGCATACACTGGA CGTACATTTACTAAAGAACGTACGAAAGGTACACATCAACCTTTCATGCC TACTCCTAGGTATACACTTACTCCATACCTCAAGGAGCGCTTAGAGTTAG ACCCTTTTACTGCTGCTGGTGGTGGTGGTGGCTCCTCAGAATTACGCGCA AACATGCCGCCTGCAGGAGAGCGACCATACGCATCGACGCGGACGCTGGC TTGCCAACTCGCGGTGCCATCCTTGCTAACGCCAAGGGCCTGGCGCAGTA CGCCGCCATCTCTCAGGTGGCCGGGCTTACCCCTATCGTCGAGCCCGAGA TCCTCATCGAGGGCACCCATAGCCCGGAGCTCTTCGCAGAGGTGAGGGAG CCGACCCGCTAGGTAGCGTGCTCGGTCCGTGTGTACGTGCGTGGGATGCT ACCGAGCTTGGTCAAAGCCTGTTGCAGCGGTTGGGGCGCGGGAAATCCAG GTCGACATCGTGTTGAGTTATAGTGAGGCCTAAAGTGAAATACAGCAGTT TGGCGGGGGGGGGGGGGGCTGGTCCGAAGGGTGAAATAGAAAATATCGAT ACGCATTCAGGCAGACAGTGCCATCGTTTTGCCGTTGCGGTGATTTAGTC CTCACGCTCCAGAATTCCGAGACGCTCTACTGTTGTGTGCTGTTGCACCG TACCATGGACTGCTTTACCGTGTATTGGTGTATCGCGCCGTATCATGTGC TGCCGTGGACTGCCACACCGTGCCGTGTGCTGTTGCATCGTACCGTGGGA TGCTTTACCGTACCATGAGCTGTACCGGACCGTGTGCTATACCGCCCGGT ACTCGTTGGGTATCCGCGCCGCTTAACTGATAAGCGAAACACTTTCGCGC GACTGCTGCACGCTAATCCTTTGACCCGTTACCCCTTTCATCCCTTGACG ATTTTGTTTTGAAGGTCAGCGAGCGAGTCCTGGGCGCGGTGTACGGTGCC CTTTCCGAGGCAGGCGTGTTTCTCGAGGGAACAATTCTCAAGTCGCAGAT GATCATGGCCGGAGTTGACGCTCCCGAAAAGGTACGTAAGCAGCGGACTA AGTGTGCTCGATGTATGATCAAAAATACAAAATACCACATGCTGCACTAT TACTGCTTAAGCCTCACTCTGAATCTCTGCTTTGTCCTTAATCAACAATA TTTATATATAGACTACCGTAGACATCATCAACTTTTTCAAGCTTTTCACA CAAATAAAAAAATACATCCCTACAAGGTTTGACGGCAGAAAAACGCTGAC GACTTTGACCCCTTTGCGCAAAGAGGTTCAAGATGTAAGGTGTGAGGTGT GCCCACATGGGGATGGAAAGGAGGGGGAAGTTGAGGTCTACCCGTACTAC CCATGTCGAAGTACATTTCGGTAAACACGCTTCATCCATCAAAACCCCAT TATAGAAGTATGTATTGTACTTTTATTCAGTTTGTTTATTTATTTTTCGG TCAAAAAATTAAGCCGAGCTGGGACCTGTGCTAACCTGTCTGCTGATCGT CTTACCGTCACCAAGCAACGCACGAGAACATACCTTGGCATGAGGCCACA GGCTGTAACACGGGAGTCATGAAAAGCGCACTTTTTTTTTTCGTTCACTC CCGTGGGGCGGATGGTCGATGTTATCGTTTGCTATAATATAGAGGAGCGC ATAGCTTTCCTTTTTCGCCCCCCCGCCCCCTCTTCTCTATCTCTTTCTGC CATAGTCTCTATCTCTCTTTCTCTCTCCCCGTTCGCTTTCCGGCGATGGT TGATATTGAACTTAAACACTCTTCTGTTTTCTCAAATCCTCCTGTGTATT TCCCCCCACCCCTCTCTTTTTCATTCACTTTCCGAGGATTGTCTCTCTTG AGAAGTAATCTTCCCTTTTTTCTTGTTTTTTGTTTGTCTTTTGTTTTTAC TTTGAAACCATTTCCTGGCGGTGGTCGGTGATAATGGATTGACGAAAGGC GACCCCGTCCCTGACGGCGGAGCTGACGCTACAAACCCTGCGGAGGCGTC TACCCCCCGCCGTTCCCGGGGTGGTTTTCTTGTCCGGGGGGCAATCGGAG GAGGAAGCGACCGTGAACCTGAATCTCATTAACAAGCTGGCGAAGGATGA CGTTGACGGCAGACGACAGCACCCGTGGGTCCTGAGTTTTAGCTTCGGCC GCAGCCTTCAGGCCAGCGTCTTGAAGGTA
back to top

Coding sequence (CDS) from alignment at H-elongata_contig65027:193..3371-

>mRNA_H-elongata_contig65027.14091.1 ID=mRNA_H-elongata_contig65027.14091.1|Name=mRNA_H-elongata_contig65027.14091.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1692bp|location=Sequence derived from alignment at H-elongata_contig65027:193..3371- (Himanthalia elongata Himel1 dioecious)
ATCGGCAAGCGCTTGGTAGGGGCGGGCCTCACCAACGATGCGGAGACTCG
CCGCGCGTACCGTGAAGTGTTATTGGCCCACCCACGCTTGGGGGAGTGGC
TGACAGGCGCTATTCTATTCGAGGAGACGCTGCTGCAGGGCAACGGTGAG
GGCGTGCTATTCGTGGAAGTGTTGCGGGCGAAGGGGATTGTGCCGGGGGT
CAAGACAGACAAAGGACTGGAGCCCATCCCCGAGAGCCCGCGAGAGTCCA
CTACGAGAGGGTTGGACACGCTGTTGCATAGGAGCAGGAGTTACTACCAA
CAGGGCGCGCGCTTCGCCAAGTGATCGGCAAGCGCTTGGTAGGGGCGGGC
CTCACCAACGATGCGGAGACTCGCCGCGCGTACCGTGAAGTGTTATTGGC
CCACCCACGCTTGGGGGAGTGGCTGACAGGCGCTATTCTATTCGAGGAGA
CGCTGCTGCAGGGCAACGGTGAGGGCGTGCTATTCGTGGAAGTGTTGCGG
GCGAAGGGGATTGTGCCGGGGGTCAAGACAGACAAAGGACTGGAGCCCAT
CCCCGAGAGCCCGCGAGAGTCCACTACGAGAGGGTTGGACACGCTGTTGC
ATAGGAGCAGGAGTTACTACCAACAGGGCGCGCGCTTCGCCAAGTGGAGA
GCGACCATACGCATCGACGCGGACGCTGGCTTGCCAACTCGCGGTGCCAT
CCTTGCTAACGCCAAGGGCCTGGCGCAGTACGCCGCCATCTCTCAGGTGG
CCGGGCTTACCCCTATCGTCGAGCCCGAGATCCTCATCGAGGGCACCCAT
AGCCCGGAGCTCTTCGCAGAGGAGAGCGACCATACGCATCGACGCGGACG
CTGGCTTGCCAACTCGCGGTGCCATCCTTGCTAACGCCAAGGGCCTGGCG
CAGTACGCCGCCATCTCTCAGGTGGCCGGGCTTACCCCTATCGTCGAGCC
CGAGATCCTCATCGAGGGCACCCATAGCCCGGAGCTCTTCGCAGAGGTCA
GCGAGCGAGTCCTGGGCGCGGTGTACGGTGCCCTTTCCGAGGCAGGCGTG
TTTCTCGAGGGAACAATTCTCAAGTCGCAGATGATCATGGCCGGAGTTGA
CGCTCCCGAAAAGGTCAGCGAGCGAGTCCTGGGCGCGGTGTACGGTGCCC
TTTCCGAGGCAGGCGTGTTTCTCGAGGGAACAATTCTCAAGTCGCAGATG
ATCATGGCCGGAGTTGACGCTCCCGAAAAGGCGACCCCGTCCCTGACGGC
GGAGCTGACGCTACAAACCCTGCGGAGGCGTCTACCCCCCGCCGTTCCCG
GGGTGGTTTTCTTGTCCGGGGGGCAATCGGAGGAGGAAGCGACCGTGAAC
CTGAATCTCATTAACAAGCTGGCGAAGGATGACGTTGACGGCAGACGACA
GCACCCGTGGGTCCTGAGTTTTAGCTTCGGCCGCAGCCTTCAGGCCAGCG
TCTTGAAGGTAGCGACCCCGTCCCTGACGGCGGAGCTGACGCTACAAACC
CTGCGGAGGCGTCTACCCCCCGCCGTTCCCGGGGTGGTTTTCTTGTCCGG
GGGGCAATCGGAGGAGGAAGCGACCGTGAACCTGAATCTCATTAACAAGC
TGGCGAAGGATGACGTTGACGGCAGACGACAGCACCCGTGGGTCCTGAGT
TTTAGCTTCGGCCGCAGCCTTCAGGCCAGCGTCTTGAAGGTA
back to top